Carg18105 (gene) Silver-seed gourd

Overview
NameCarg18105
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionBeta-mannosyltransferase-like protein
LocationCucurbita_argyrosperma_scaffold_095 : 417018 .. 419385 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCTGAGGATAAAGGCGGTGGTGGATAAATTCATGGAGGAGCTTAAGGAAGCCTTGGATGCGGATATTCAAGATCGTATCATGAAGGAGAGAGAGATGCAGAGTTACATTGAAGAGCGCGAACGTGAGGTTGCTGAGCGCGAAGCTGCTTGGAAGGCTGAACTCTCCCGTCGCGAGGTACTCGGTTGAATTTTCTCTCTTTGTCGTTGAATTAGTTTGTTTGTTTAGGATAGCCAATCGATGATTCTGATGAGTTTTCATGGATGTATGCTCATTTTTATATTCCGATGTTCTCACGCTTAATTTAGTCAAGAAGAGTTTTCAGTCCTTGTCACTTCTCTTATACATGCTCGATGTAACGTGAATTCTTTCATTCCGAGTTGTTGAAATGAAGACTTTTGCTCCCAATCTCATCACTCCATAGTTGGATTTTTTAAGCATTCAAATCACAGCTTAGTTGTGGTGCTTTCACAATTATGTTATAAACTGATCTTTTTGTGGTAGGTTTGGTAGATTTTTAGTTCGAAATTAAGATGGCGAGAGCTTATTTATAGTAGGATGCCTTTCGGCTATCTCTTTAAGTTCAAGATTGCACCTTCTTTATTCTTCCCCTGCTGTGTAGATCTTACCTTTTAGATTGTCAACTGTTTGTTTTCTGGACTTTACCAGCCATTACTGCACGAATTACAGGATGCCCATTTCTTTTGTCGCTTGTTTTCATATTTTCCTCCAAATCTTGGCAGTAAAGATCAGGAATTCCGGATGATAAGTTTCCATGGGATGTTTGGCATATGATTTTAAAGAGTTGGGAACATGGAGCCAAGTTTGAGTGAAGGAACAAGCTATAGTTTCGCTGGTTTGGTTTTTGTAGATTTACAACCGAGAGACATTAGCATATGGTATAAAAGGTGGCAAGATTAGAATTTGTTTACCAATAATGGGTATAGTGCCAAGGGAAGTATTAGATAGCTTCCCCTTCTCTCCCAATACAGCAATTGTCAAGCCAAAAAGATGCCCAACCAACCGACCCATCTCAAAAACATTCCCGAGTGTGGATATTGTTCACTTTGGGCTTTCCTTTTCAGACTTCCTCTCAAGGTTTTTAGAACGCGTCTACTAGGGAGAGGTTTCCGCACCCCCATAAAAAATGCTTCGTTCTTCTCCCCAACCGATGTGGGATCTCACAATCCACCCCCTTCGAGGCCCAACGTCCTCACTAACACTTGTTCCCTTCTCCAATTGATATTGACCCCCAATCCACTACCTTTCGGGGCCTAACGTCCTTGCTAGCACACAGCCTCGTGTCCACTCCCTTTGGGGCTCAGTCTCCTTGCTAGCACATCGCCCAGTGTCTTGCTTTGATACCATTTGTAACGGCTCAAGTCCACCGTAAGCAAATTAGGAGAACAAAGCATGTTTTATAGGGGTGTGGAAACCTCTCCTTAGCAGACACGTACCTTGAGGGGAAGCCCGAAAGGTAAAATCCTAAGAGGATAATATCTGCTAGCGGTGAGCTTGGGCCGTTACACTTAGCCAATAATCACCTAAATGATTCCCCTCTCTCTCTCCTCACGTGCCTCCTCTTGTATACATATTTAATAGGTCTATCAGGTCTATCATATTAGTTTTAATGGTGCAGCGCATCATAGTAAATTCAGCGCTAAGGTTTGGTGTAGAACTTGAAGTTACCCATTCTGCAGATATGTTGATTGTATCTGAGTAGCAATAGTTAATGAAAGATGAACTCAATATGATTCAATCAGTTAAGGTACATCTTATTGACCAAGAGGTCAGAGGTTTGAATCTCCCATCTTGACCGACCCCACATAGTGTTGGGTTCTCAAAAAGACAATAATTTCTGCAGATATGTTGATTGTATTGAGCAGCAAATAGTTAATAAAAGATGAACAGAATATGAGTCAATCGGTTAAGGTGTATCTTATTGACCAAGAGGTTAGAGGTTTGAATCTTCCACCTTGACCGACCCCATATGGTGTTGAATTCTCAAAAAGATAATAATGAGTCGAAGAACTATCAAAGTAAAGAGCTTGAGTTTTTCTTTTATTATAATGTTCTGTAAATTCTTTTCATCCCCTTTTCATGCATCAACCAATTAACCAATTCATGCTTCCAGAATATGACTCAATCGGTTAAGGTACATATTATTCTTCTCATCACGCTTCGATTTTAGGCAGAGATTGCACGACAAGAAGCAAGGTTGAAGATGGAGAAGGAGAATCTGGAAAAAGAGAAAAGTGTGCTAATGGGAACTGCATCAAATCAAGATAACCAAGACGGAGCTCTTGAAATCACTGTAAGTGGTGAAAAATACCGATGTCTCAGGTTTTCAAAGGCAAAAAAATGA

mRNA sequence

ATGTCTCTGAGGATAAAGGCGGTGGTGGATAAATTCATGGAGGAGCTTAAGGAAGCCTTGGATGCGGATATTCAAGATCGTATCATGAAGGAGAGAGAGATGCAGAGTTACATTGAAGAGCGCGAACGTGAGGTTGCTGAGCGCGAAGCTGCTTGGAAGGCTGAACTCTCCCGTCGCGAGGCAGAGATTGCACGACAAGAAGCAAGGTTGAAGATGGAGAAGGAGAATCTGGAAAAAGAGAAAAGTGTGCTAATGGGAACTGCATCAAATCAAGATAACCAAGACGGAGCTCTTGAAATCACTGTAAGTGGTGAAAAATACCGATGTCTCAGGTTTTCAAAGGCAAAAAAATGA

Coding sequence (CDS)

ATGTCTCTGAGGATAAAGGCGGTGGTGGATAAATTCATGGAGGAGCTTAAGGAAGCCTTGGATGCGGATATTCAAGATCGTATCATGAAGGAGAGAGAGATGCAGAGTTACATTGAAGAGCGCGAACGTGAGGTTGCTGAGCGCGAAGCTGCTTGGAAGGCTGAACTCTCCCGTCGCGAGGCAGAGATTGCACGACAAGAAGCAAGGTTGAAGATGGAGAAGGAGAATCTGGAAAAAGAGAAAAGTGTGCTAATGGGAACTGCATCAAATCAAGATAACCAAGACGGAGCTCTTGAAATCACTGTAAGTGGTGAAAAATACCGATGTCTCAGGTTTTCAAAGGCAAAAAAATGA

Protein sequence

MSLRIKAVVDKFMEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEIARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFSKAKK
Homology
[Close]
BLAST of Carg18105 vs. NCBI nr
Match: XP_022928423.1 (uncharacterized protein LOC111435239 [Cucurbita moschata] >XP_022989491.1 uncharacterized protein LOC111486533 [Cucurbita maxima] >XP_023529819.1 uncharacterized protein LOC111792534 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 128.6 bits (322), Expect = 1.3e-26
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0 

Query: 1   MSLRIKAVVDKFMEELKEALDADIQDRIMKEREMQSYIEERXXXXXXXXXXXXXXXXXXX 60
           MSLRIKAVVDKFMEELKEALDADIQDRIMKEREMQSYIEERXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MSLRIKAVVDKFMEELKEALDADIQDRIMKEREMQSYIEERXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXLMGTASNQDNQDGALEITVSGEKYRCLRFSKAKK 118
           XXXXXXXXXXXXXXXXXXXXXXXLMGTASNQDNQDGALEITVSGEKYRCLRFSKAKK
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXLMGTASNQDNQDGALEITVSGEKYRCLRFSKAKK 117

[Close]
BLAST of Carg18105 vs. NCBI nr
Match: XP_010530976.1 (PREDICTED: uncharacterized protein LOC104807412 [Tarenaya hassleriana] >XP_022020807.1 uncharacterized protein LOC110920893 [Helianthus annuus] >OTG34563.1 hypothetical protein HannXRQ_Chr02g0047201 [Helianthus annuus])

HSP 1 Score: 127.1 bits (318), Expect = 3.9e-26
Identity = 112/117 (95.73%), Postives = 113/117 (96.58%), Query Frame = 0 

Query: 1   MSLRIKAVVDKFMEELKEALDADIQDRIMKEREMQSYIEERXXXXXXXXXXXXXXXXXXX 60
           MSLRIKAVVDKF+EELKEALDADIQDRIMKEREMQSYIEER  XXXXXXXXXXXXXXXXX
Sbjct: 1   MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEERERXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXLMGTASNQDNQDGALEITVSGEKYRCLRFSKAKK 118
           XXXXXXXXXXXXXXXXXXXXX  LMGTASNQDNQDGALEITVSGEKYRCLRFSKAKK
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXSVLMGTASNQDNQDGALEITVSGEKYRCLRFSKAKK 117

[Close]
BLAST of Carg18105 vs. NCBI nr
Match: XP_010246894.1 (PREDICTED: uncharacterized protein LOC104590070 [Nelumbo nucifera])

HSP 1 Score: 125.9 bits (315), Expect = 8.7e-26
Identity = 115/117 (98.29%), Postives = 117/117 (100.00%), Query Frame = 0 

Query: 1   MSLRIKAVVDKFMEELKEALDADIQDRIMKEREMQSYIEERXXXXXXXXXXXXXXXXXXX 60
           MSLRIKAVVDKF++ELKEALDADIQDRIMKEREMQSYIEERXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MSLRIKAVVDKFVQELKEALDADIQDRIMKEREMQSYIEERXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXLMGTASNQDNQDGALEITVSGEKYRCLRFSKAKK 118
           XXXXXXXXXXXXXXXXXXXXXXXLMGTASNQDNQDGALEITVSGEKYRCLRFSKAKK
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXLMGTASNQDNQDGALEITVSGEKYRCLRFSKAKK 117

[Close]
BLAST of Carg18105 vs. NCBI nr
Match: XP_015964579.1 (uncharacterized protein LOC107488362 [Arachis duranensis] >XP_015964580.1 uncharacterized protein LOC107488362 [Arachis duranensis] >XP_016202231.1 uncharacterized protein LOC107643166 [Arachis ipaensis] >XP_020978893.1 uncharacterized protein LOC107643166 [Arachis ipaensis] >XP_020978894.1 uncharacterized protein LOC107643166 [Arachis ipaensis] >XP_025699828.1 uncharacterized protein LOC112801367 [Arachis hypogaea] >XP_025699829.1 uncharacterized protein LOC112801367 [Arachis hypogaea] >XP_025699830.1 uncharacterized protein LOC112801367 [Arachis hypogaea] >XP_025653946.1 uncharacterized protein LOC112749778 [Arachis hypogaea] >XP_025653947.1 uncharacterized protein LOC112749778 [Arachis hypogaea] >XP_025653948.1 uncharacterized protein LOC112749778 [Arachis hypogaea])

HSP 1 Score: 125.9 bits (315), Expect = 8.7e-26
Identity = 111/117 (94.87%), Postives = 113/117 (96.58%), Query Frame = 0 

Query: 1   MSLRIKAVVDKFMEELKEALDADIQDRIMKEREMQSYIEERXXXXXXXXXXXXXXXXXXX 60
           MSLRIKAVVDKF++ELKEALDADIQDRIMKEREMQSYIEER  XXXXXXXXXXXXXXXXX
Sbjct: 1   MSLRIKAVVDKFVQELKEALDADIQDRIMKEREMQSYIEERERXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXLMGTASNQDNQDGALEITVSGEKYRCLRFSKAKK 118
           XXXXXXXXXXXXXXXXXXXXX  LMGTASNQDNQDGALEITVSGEKYRCLRFSKAKK
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXSVLMGTASNQDNQDGALEITVSGEKYRCLRFSKAKK 117

[Close]
BLAST of Carg18105 vs. NCBI nr
Match: PSS08228.1 (Midasin like [Actinidia chinensis var. chinensis])

HSP 1 Score: 125.9 bits (315), Expect = 8.7e-26
Identity = 111/117 (94.87%), Postives = 113/117 (96.58%), Query Frame = 0 

Query: 1   MSLRIKAVVDKFMEELKEALDADIQDRIMKEREMQSYIEERXXXXXXXXXXXXXXXXXXX 60
           MSLRIKAVVDKF+EELKEALDADIQDRIMKEREMQSYIEER  XXXXXXXXXXXXXXXXX
Sbjct: 1   MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEERERXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXLMGTASNQDNQDGALEITVSGEKYRCLRFSKAKK 118
           XXXXXXXXXXXXXXXXXXXXX  LMGTASNQDNQDGALEITVSGEKYRCLRF+KAKK
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXSVLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117

[Close]
BLAST of Carg18105 vs. TAIR10
Match: AT2G17350.1 (unknown protein)

HSP 1 Score: 124.0 bits (310), Expect = 6.0e-29
Identity = 106/117 (90.60%), Postives = 108/117 (92.31%), Query Frame = 0 

Query: 1   MSLRIKAVVDKFMEELKEALDADIQDRIMKEREMQSYIEERXXXXXXXXXXXXXXXXXXX 60
           MSLRIK VVDKF+EELK+ALDADIQDRIMKEREMQSYIEER     XXXXXXXXXXXXXX
Sbjct: 1   MSLRIKLVVDKFVEELKQALDADIQDRIMKEREMQSYIEEREREVAXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXLMGTASNQDNQDGALEITVSGEKYRCLRFSKAKK 118
           XXXXXXXXXXXXXXXXXXXX   LMGTASNQDNQDGALEITVSGEKYRCLRFSKAKK
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXKSVLMGTASNQDNQDGALEITVSGEKYRCLRFSKAKK 117

[Close]
BLAST of Carg18105 vs. TrEMBL
Match: tr|A0A251VHC3|A0A251VHC3_HELAN (Uncharacterized protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr02g0047201 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.6e-26
Identity = 112/117 (95.73%), Postives = 113/117 (96.58%), Query Frame = 0 

Query: 1   MSLRIKAVVDKFMEELKEALDADIQDRIMKEREMQSYIEERXXXXXXXXXXXXXXXXXXX 60
           MSLRIKAVVDKF+EELKEALDADIQDRIMKEREMQSYIEER  XXXXXXXXXXXXXXXXX
Sbjct: 1   MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEERERXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXLMGTASNQDNQDGALEITVSGEKYRCLRFSKAKK 118
           XXXXXXXXXXXXXXXXXXXXX  LMGTASNQDNQDGALEITVSGEKYRCLRFSKAKK
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXSVLMGTASNQDNQDGALEITVSGEKYRCLRFSKAKK 117

[Close]
BLAST of Carg18105 vs. TrEMBL
Match: tr|A0A1D1Z833|A0A1D1Z833_9ARAE (Tripartite motif-containing protein 5 OS=Anthurium amnicola OX=1678845 GN=TRIM5_0 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.6e-26
Identity = 113/117 (96.58%), Postives = 114/117 (97.44%), Query Frame = 0 

Query: 1   MSLRIKAVVDKFMEELKEALDADIQDRIMKEREMQSYIEERXXXXXXXXXXXXXXXXXXX 60
           MSLRIKAVVDKF+EELKEALDADIQDRIMKEREMQSYIEER  XXXXXXXXXXXXXXXXX
Sbjct: 1   MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEERERXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXLMGTASNQDNQDGALEITVSGEKYRCLRFSKAKK 118
           XXXXXXXXXXXXXXXXXXXXXX LMGTASNQDNQDGALEITVSGEKYRCLRFSKAKK
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXVLMGTASNQDNQDGALEITVSGEKYRCLRFSKAKK 117

[Close]
BLAST of Carg18105 vs. TrEMBL
Match: tr|A0A1S3BQZ9|A0A1S3BQZ9_CUCME (uncharacterized protein LOC103492565 OS=Cucumis melo OX=3656 GN=LOC103492565 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.8e-26
Identity = 115/117 (98.29%), Postives = 117/117 (100.00%), Query Frame = 0 

Query: 1   MSLRIKAVVDKFMEELKEALDADIQDRIMKEREMQSYIEERXXXXXXXXXXXXXXXXXXX 60
           MSLRIKAVVDKF+EELKEALDADIQDRIMKEREMQSYIEERXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEERXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXLMGTASNQDNQDGALEITVSGEKYRCLRFSKAKK 118
           XXXXXXXXXXXXXXXXXXXXXXXLMGTASNQDNQDGALEITVSGEKYRCLRF+KAKK
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117

[Close]
BLAST of Carg18105 vs. TrEMBL
Match: tr|B9RKZ1|B9RKZ1_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1566200 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.8e-26
Identity = 115/117 (98.29%), Postives = 117/117 (100.00%), Query Frame = 0 

Query: 1   MSLRIKAVVDKFMEELKEALDADIQDRIMKEREMQSYIEERXXXXXXXXXXXXXXXXXXX 60
           MSLRIKAVVDKF+EELKEALDADIQDRIMKEREMQSYIEERXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEERXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXLMGTASNQDNQDGALEITVSGEKYRCLRFSKAKK 118
           XXXXXXXXXXXXXXXXXXXXXXXLMGTASNQDNQDGALEITVSGEKYRCLRF+KAKK
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117

[Close]
BLAST of Carg18105 vs. TrEMBL
Match: tr|A0A2R6QHZ9|A0A2R6QHZ9_ACTCH (Midasin like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc07194 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.8e-26
Identity = 111/117 (94.87%), Postives = 113/117 (96.58%), Query Frame = 0 

Query: 1   MSLRIKAVVDKFMEELKEALDADIQDRIMKEREMQSYIEERXXXXXXXXXXXXXXXXXXX 60
           MSLRIKAVVDKF+EELKEALDADIQDRIMKEREMQSYIEER  XXXXXXXXXXXXXXXXX
Sbjct: 1   MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEERERXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXLMGTASNQDNQDGALEITVSGEKYRCLRFSKAKK 118
           XXXXXXXXXXXXXXXXXXXXX  LMGTASNQDNQDGALEITVSGEKYRCLRF+KAKK
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXSVLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117

The following BLAST results are available for this feature:
BLAST of Carg18105 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022928423.11.3e-26100.00uncharacterized protein LOC111435239 [Cucurbita moschata] >XP_022989491.1 unchar... [more]
XP_010530976.13.9e-2695.73PREDICTED: uncharacterized protein LOC104807412 [Tarenaya hassleriana] >XP_02202... [more]
XP_010246894.18.7e-2698.29PREDICTED: uncharacterized protein LOC104590070 [Nelumbo nucifera][more]
XP_015964579.18.7e-2694.87uncharacterized protein LOC107488362 [Arachis duranensis] >XP_015964580.1 unchar... [more]
PSS08228.18.7e-2694.87Midasin like [Actinidia chinensis var. chinensis][more]
BLAST of Carg18105 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G17350.16.0e-2990.60unknown protein[more]
BLAST of Carg18105 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg18105 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A251VHC3|A0A251VHC3_HELAN2.6e-2695.73Uncharacterized protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr02g0047201 PE... [more]
tr|A0A1D1Z833|A0A1D1Z833_9ARAE2.6e-2696.58Tripartite motif-containing protein 5 OS=Anthurium amnicola OX=1678845 GN=TRIM5_... [more]
tr|A0A1S3BQZ9|A0A1S3BQZ9_CUCME5.8e-2698.29uncharacterized protein LOC103492565 OS=Cucumis melo OX=3656 GN=LOC103492565 PE=... [more]
tr|B9RKZ1|B9RKZ1_RICCO5.8e-2698.29Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1566200 PE=4 SV=1[more]
tr|A0A2R6QHZ9|A0A2R6QHZ9_ACTCH5.8e-2694.87Midasin like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc07194 ... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg18105-RACarg18105-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 56..83
NoneNo IPR availablePANTHERPTHR35715:SF3SUBFAMILY NOT NAMEDcoord: 1..117
NoneNo IPR availablePANTHERPTHR35715FAMILY NOT NAMEDcoord: 1..117

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg18105Csa6G117750Cucumber (Chinese Long) v2carcuB1079
Carg18105Csa7G027820Cucumber (Chinese Long) v2carcuB1081
Carg18105MELO3C015698Melon (DHL92) v3.5.1carmeB1034
Carg18105MELO3C013484Melon (DHL92) v3.5.1carmeB1032
Carg18105ClCG02G003280Watermelon (Charleston Gray)carwcgB1037
Carg18105CSPI07G02240Wild cucumber (PI 183967)carcpiB1103
Carg18105Cucsa.119960Cucumber (Gy14) v1carcgyB1184
Carg18105CmaCh19G008100Cucurbita maxima (Rimu)carcmaB1474
Carg18105CmaCh11G013220Cucurbita maxima (Rimu)carcmaB1471
Carg18105CmoCh11G017990Cucurbita moschata (Rifu)carcmoB1428
Carg18105Lsi11G013040Bottle gourd (USVL1VR-Ls)carlsiB974
Carg18105Lsi10G000070Bottle gourd (USVL1VR-Ls)carlsiB972
Carg18105Cp4.1LG15g06560Cucurbita pepo (Zucchini)carcpeB1481
Carg18105Cp4.1LG04g04330Cucurbita pepo (Zucchini)carcpeB1483
Carg18105CsGy7G001960Cucumber (Gy14) v2carcgybB1049
Carg18105MELO3C013484.2Melon (DHL92) v3.6.1carmedB1046
Carg18105MELO3C015698.2Melon (DHL92) v3.6.1carmedB1048
Carg18105CsaV3_6G010030Cucumber (Chinese Long) v3carcucB1112
Carg18105Cla97C02G029820Watermelon (97103) v2carwmbB1124
Carg18105Bhi05G001339Wax gourdcarwgoB1253
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg18105Carg04110Silver-seed gourdcarcarB242
Carg18105Carg19773Silver-seed gourdcarcarB631
The following block(s) are covering this gene:
GeneOrganismBlock
Carg18105Silver-seed gourdcarcarB378
Carg18105Cucumber (Gy14) v2carcgybB1047
Carg18105Cucumber (Gy14) v1carcgyB1183
Carg18105Cucurbita maxima (Rimu)carcmaB1475
Carg18105Cucurbita moschata (Rifu)carcmoB1430
Carg18105Cucurbita moschata (Rifu)carcmoB1431
Carg18105Cucurbita pepo (Zucchini)carcpeB1482
Carg18105Cucumber (Chinese Long) v3carcucB1114
Carg18105Watermelon (97103) v1carwmB1066