CsaV3_6G048330 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTTAAGAGGGCTGCTTCATTCAGTAAGTTATCTTCTTGGGAACCCAAATGAGGCCCATGCCTATGGTGAAGAGAGAAGTTCAAAAGGGAAAAAGGGTTATGAAGAATTATGCAATTCTGGGTTTCAAATGCCTCTTCATTACCCTCGCTACAAGAAGTCGGATTATCAGAAGATGGAGGAGTGGAAGCTGGATCTCCTTCTCAAAGAATATGGCTTGAGTTTTGAAGGCAGTTTGGAGGAGAAGAGGGCCTTTGCAATGGGTGCATTTTTATGGCCTGATCAGAATTGA ATGGATTTAAGAGGGCTGCTTCATTCAGTAAGTTATCTTCTTGGGAACCCAAATGAGGCCCATGCCTATGGTGAAGAGAGAAGTTCAAAAGGGAAAAAGGGTTATGAAGAATTATGCAATTCTGGGTTTCAAATGCCTCTTCATTACCCTCGCTACAAGAAGTCGGATTATCAGAAGATGGAGGAGTGGAAGCTGGATCTCCTTCTCAAAGAATATGGCTTGAGTTTTGAAGGCAGTTTGGAGGAGAAGAGGGCCTTTGCAATGGGTGCATTTTTATGGCCTGATCAGAATTGA ATGGATTTAAGAGGGCTGCTTCATTCAGTAAGTTATCTTCTTGGGAACCCAAATGAGGCCCATGCCTATGGTGAAGAGAGAAGTTCAAAAGGGAAAAAGGGTTATGAAGAATTATGCAATTCTGGGTTTCAAATGCCTCTTCATTACCCTCGCTACAAGAAGTCGGATTATCAGAAGATGGAGGAGTGGAAGCTGGATCTCCTTCTCAAAGAATATGGCTTGAGTTTTGAAGGCAGTTTGGAGGAGAAGAGGGCCTTTGCAATGGGTGCATTTTTATGGCCTGATCAGAATTGA MDLRGLLHSVSYLLGNPNEAHAYGEERSSKGKKGYEELCNSGFQMPLHYPRYKKSDYQKMEEWKLDLLLKEYGLSFEGSLEEKRAFAMGAFLWPDQN
BLAST of CsaV3_6G048330 vs. NCBI nr
Match: XP_011658113.1 (PREDICTED: uncharacterized protein LOC105435946 [Cucumis sativus] >KGN49041.1 hypothetical protein Csa_6G511080 [Cucumis sativus]) HSP 1 Score: 206.8 bits (525), Expect = 3.3e-50 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of CsaV3_6G048330 vs. NCBI nr
Match: XP_022132797.1 (uncharacterized protein LOC111005569 [Momordica charantia]) HSP 1 Score: 141.7 bits (356), Expect = 1.3e-30 Identity = 73/106 (68.87%), Postives = 80/106 (75.47%), Query Frame = 0
BLAST of CsaV3_6G048330 vs. NCBI nr
Match: XP_021294941.1 (uncharacterized protein LOC110424651 [Herrania umbratica]) HSP 1 Score: 120.9 bits (302), Expect = 2.4e-24 Identity = 64/120 (53.33%), Postives = 78/120 (65.00%), Query Frame = 0
BLAST of CsaV3_6G048330 vs. NCBI nr
Match: XP_007026334.2 (PREDICTED: uncharacterized protein LOC18597318 [Theobroma cacao]) HSP 1 Score: 120.2 bits (300), Expect = 4.0e-24 Identity = 65/120 (54.17%), Postives = 79/120 (65.83%), Query Frame = 0
BLAST of CsaV3_6G048330 vs. NCBI nr
Match: EOY28956.1 (Uncharacterized protein TCM_030413 [Theobroma cacao]) HSP 1 Score: 119.8 bits (299), Expect = 5.2e-24 Identity = 63/120 (52.50%), Postives = 77/120 (64.17%), Query Frame = 0
BLAST of CsaV3_6G048330 vs. TAIR10
Match: AT5G55620.1 (unknown protein) HSP 1 Score: 94.0 bits (232), Expect = 5.6e-20 Identity = 40/56 (71.43%), Postives = 50/56 (89.29%), Query Frame = 0
BLAST of CsaV3_6G048330 vs. TAIR10
Match: AT5G41761.1 (unknown protein) HSP 1 Score: 86.3 bits (212), Expect = 1.2e-17 Identity = 43/84 (51.19%), Postives = 55/84 (65.48%), Query Frame = 0
BLAST of CsaV3_6G048330 vs. TAIR10
Match: AT3G09950.1 (unknown protein) HSP 1 Score: 85.5 bits (210), Expect = 2.0e-17 Identity = 42/77 (54.55%), Postives = 54/77 (70.13%), Query Frame = 0
BLAST of CsaV3_6G048330 vs. TAIR10
Match: AT3G55570.1 (unknown protein) HSP 1 Score: 79.3 bits (194), Expect = 1.4e-15 Identity = 40/78 (51.28%), Postives = 47/78 (60.26%), Query Frame = 0
BLAST of CsaV3_6G048330 vs. TAIR10
Match: AT3G11405.1 (unknown protein) HSP 1 Score: 60.1 bits (144), Expect = 9.0e-10 Identity = 31/54 (57.41%), Postives = 36/54 (66.67%), Query Frame = 0
BLAST of CsaV3_6G048330 vs. TrEMBL
Match: tr|A0A0A0KMW8|A0A0A0KMW8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511080 PE=4 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 2.2e-50 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of CsaV3_6G048330 vs. TrEMBL
Match: tr|A0A2N9EZP3|A0A2N9EZP3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8195 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 2.7e-24 Identity = 57/99 (57.58%), Postives = 74/99 (74.75%), Query Frame = 0
BLAST of CsaV3_6G048330 vs. TrEMBL
Match: tr|A0A061GHA6|A0A061GHA6_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_030413 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 3.5e-24 Identity = 63/120 (52.50%), Postives = 77/120 (64.17%), Query Frame = 0
BLAST of CsaV3_6G048330 vs. TrEMBL
Match: tr|I1MFQ9|I1MFQ9_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=102663856 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 2.9e-23 Identity = 63/116 (54.31%), Postives = 78/116 (67.24%), Query Frame = 0
BLAST of CsaV3_6G048330 vs. TrEMBL
Match: tr|B9SA77|B9SA77_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0863040 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 5.0e-23 Identity = 61/116 (52.59%), Postives = 74/116 (63.79%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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