Lsi01G004930 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTTAAGATGGCTGCTTCATTCAACAAGTTATCTTCTTGGGAACCCAAATGAGGTCCATGGCTATGGTGAAGAGAGAAGTCCAAAAGGGAAAAGGGGTTGTGAAGAAATATGCACTTCTGGGTTTCAAATGCCTCTTCATTACCCTCGCTACAAGAAAGCAGATTACGAGAAGATGGAGGAGTGGAAGCTTGATCTCCTGCTCAAGGAATATGGCTTGAGTTTTCAAGGCAGTTTGGAGGAGAAGAGGGCCTTTGCTATGGGTGCATTTCTATGGCCTGATCAGATTTGA ATGGCTTTAAGATGGCTGCTTCATTCAACAAGTTATCTTCTTGGGAACCCAAATGAGGTCCATGGCTATGGTGAAGAGAGAAGTCCAAAAGGGAAAAGGGGTTGTGAAGAAATATGCACTTCTGGGTTTCAAATGCCTCTTCATTACCCTCGCTACAAGAAAGCAGATTACGAGAAGATGGAGGAGTGGAAGCTTGATCTCCTGCTCAAGGAATATGGCTTGAGTTTTCAAGGCAGTTTGGAGGAGAAGAGGGCCTTTGCTATGGGTGCATTTCTATGGCCTGATCAGATTTGA ATGGCTTTAAGATGGCTGCTTCATTCAACAAGTTATCTTCTTGGGAACCCAAATGAGGTCCATGGCTATGGTGAAGAGAGAAGTCCAAAAGGGAAAAGGGGTTGTGAAGAAATATGCACTTCTGGGTTTCAAATGCCTCTTCATTACCCTCGCTACAAGAAAGCAGATTACGAGAAGATGGAGGAGTGGAAGCTTGATCTCCTGCTCAAGGAATATGGCTTGAGTTTTCAAGGCAGTTTGGAGGAGAAGAGGGCCTTTGCTATGGGTGCATTTCTATGGCCTGATCAGATTTGA MALRWLLHSTSYLLGNPNEVHGYGEERSPKGKRGCEEICTSGFQMPLHYPRYKKADYEKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQI
BLAST of Lsi01G004930 vs. TrEMBL
Match: A0A0A0KMW8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G511080 PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 3.1e-43 Identity = 83/96 (86.46%), Postives = 88/96 (91.67%), Query Frame = 1
BLAST of Lsi01G004930 vs. TrEMBL
Match: I1MFQ9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G117600 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 4.0e-27 Identity = 68/115 (59.13%), Postives = 80/115 (69.57%), Query Frame = 1
BLAST of Lsi01G004930 vs. TrEMBL
Match: A0A0B2RLN7_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_009934 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 5.2e-27 Identity = 68/115 (59.13%), Postives = 80/115 (69.57%), Query Frame = 1
BLAST of Lsi01G004930 vs. TrEMBL
Match: A0A067GFM8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g045350mg PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 6.8e-27 Identity = 63/117 (53.85%), Postives = 77/117 (65.81%), Query Frame = 1
BLAST of Lsi01G004930 vs. TrEMBL
Match: A0A061GHA6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_030413 PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 8.9e-27 Identity = 67/121 (55.37%), Postives = 79/121 (65.29%), Query Frame = 1
BLAST of Lsi01G004930 vs. TAIR10
Match: AT5G55620.1 (AT5G55620.1 unknown protein) HSP 1 Score: 94.0 bits (232), Expect = 5.5e-20 Identity = 39/57 (68.42%), Postives = 51/57 (89.47%), Query Frame = 1
BLAST of Lsi01G004930 vs. TAIR10
Match: AT3G09950.1 (AT3G09950.1 unknown protein) HSP 1 Score: 86.7 bits (213), Expect = 8.8e-18 Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 1
BLAST of Lsi01G004930 vs. TAIR10
Match: AT5G41761.1 (AT5G41761.1 unknown protein) HSP 1 Score: 82.8 bits (203), Expect = 1.3e-16 Identity = 36/57 (63.16%), Postives = 44/57 (77.19%), Query Frame = 1
BLAST of Lsi01G004930 vs. TAIR10
Match: AT3G55570.1 (AT3G55570.1 unknown protein) HSP 1 Score: 78.6 bits (192), Expect = 2.4e-15 Identity = 35/53 (66.04%), Postives = 40/53 (75.47%), Query Frame = 1
BLAST of Lsi01G004930 vs. TAIR10
Match: AT3G11405.1 (AT3G11405.1 unknown protein) HSP 1 Score: 60.1 bits (144), Expect = 8.9e-10 Identity = 31/54 (57.41%), Postives = 36/54 (66.67%), Query Frame = 1
BLAST of Lsi01G004930 vs. NCBI nr
Match: gi|778720128|ref|XP_011658113.1| (PREDICTED: uncharacterized protein LOC105435946 [Cucumis sativus]) HSP 1 Score: 182.2 bits (461), Expect = 4.4e-43 Identity = 83/96 (86.46%), Postives = 88/96 (91.67%), Query Frame = 1
BLAST of Lsi01G004930 vs. NCBI nr
Match: gi|571517919|ref|XP_006597610.1| (PREDICTED: uncharacterized protein LOC102663856 [Glycine max]) HSP 1 Score: 128.6 bits (322), Expect = 5.8e-27 Identity = 68/115 (59.13%), Postives = 80/115 (69.57%), Query Frame = 1
BLAST of Lsi01G004930 vs. NCBI nr
Match: gi|734404432|gb|KHN32943.1| (hypothetical protein glysoja_009934 [Glycine soja]) HSP 1 Score: 128.3 bits (321), Expect = 7.5e-27 Identity = 68/115 (59.13%), Postives = 80/115 (69.57%), Query Frame = 1
BLAST of Lsi01G004930 vs. NCBI nr
Match: gi|641859833|gb|KDO78523.1| (hypothetical protein CISIN_1g045350mg [Citrus sinensis]) HSP 1 Score: 127.9 bits (320), Expect = 9.8e-27 Identity = 63/117 (53.85%), Postives = 77/117 (65.81%), Query Frame = 1
BLAST of Lsi01G004930 vs. NCBI nr
Match: gi|590627017|ref|XP_007026334.1| (Uncharacterized protein TCM_030413 [Theobroma cacao]) HSP 1 Score: 127.5 bits (319), Expect = 1.3e-26 Identity = 67/121 (55.37%), Postives = 79/121 (65.29%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|