CSPI06G32880 (gene) Wild cucumber (PI 183967)

NameCSPI06G32880
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionGb|AAF04428.1
LocationChr6 : 27526643 .. 27526933 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTTAAGAGGGCTGCTTCATTCAGTAAGTTATCTTCTTGGGAACCCAAATGAGGCCCATGCCTATGGTGAAGAGAGAAGTTCAAAAGGGAAAAAGGGTTATGAAGAATTATGCAATTCTGGGTTTCAAATGCCTCTTCATTACCCTCGCTACAAGAAGTCGGATTATCAGAAGATGGAGGAGTGGAAGCTGGATCTCCTTCTCAAAGAATATGGCTTGAGTTTTGAAGGCAGTTTGGAGGAGAAGAGGGCCTTTGCAATGGGTGCATTTTTATGGCCTGATCAGAAT

mRNA sequence

ATGGATTTAAGAGGGCTGCTTCATTCAGTAAGTTATCTTCTTGGGAACCCAAATGAGGCCCATGCCTATGGTGAAGAGAGAAGTTCAAAAGGGAAAAAGGGTTATGAAGAATTATGCAATTCTGGGTTTCAAATGCCTCTTCATTACCCTCGCTACAAGAAGTCGGATTATCAGAAGATGGAGGAGTGGAAGCTGGATCTCCTTCTCAAAGAATATGGCTTGAGTTTTGAAGGCAGTTTGGAGGAGAAGAGGGCCTTTGCAATGGGTGCATTTTTATGGCCTGATCAGAAT

Coding sequence (CDS)

ATGGATTTAAGAGGGCTGCTTCATTCAGTAAGTTATCTTCTTGGGAACCCAAATGAGGCCCATGCCTATGGTGAAGAGAGAAGTTCAAAAGGGAAAAAGGGTTATGAAGAATTATGCAATTCTGGGTTTCAAATGCCTCTTCATTACCCTCGCTACAAGAAGTCGGATTATCAGAAGATGGAGGAGTGGAAGCTGGATCTCCTTCTCAAAGAATATGGCTTGAGTTTTGAAGGCAGTTTGGAGGAGAAGAGGGCCTTTGCAATGGGTGCATTTTTATGGCCTGATCAGAAT
BLAST of CSPI06G32880 vs. TrEMBL
Match: A0A0A0KMW8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G511080 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 1.5e-50
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1

Query: 1  MDLRGLLHSVSYLLGNPNEAHAYGEERSSKGKKGYEELCNSGFQMPLHYPRYKKSDYQKM 60
          MDLRGLLHSVSYLLGNPNEAHAYGEERSSKGKKGYEELCNSGFQMPLHYPRYKKSDYQKM
Sbjct: 1  MDLRGLLHSVSYLLGNPNEAHAYGEERSSKGKKGYEELCNSGFQMPLHYPRYKKSDYQKM 60

Query: 61 EEWKLDLLLKEYGLSFEGSLEEKRAFAMGAFLWPDQN 98
          EEWKLDLLLKEYGLSFEGSLEEKRAFAMGAFLWPDQN
Sbjct: 61 EEWKLDLLLKEYGLSFEGSLEEKRAFAMGAFLWPDQN 97

BLAST of CSPI06G32880 vs. TrEMBL
Match: A0A061GHA6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_030413 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.2e-24
Identity = 63/120 (52.50%), Postives = 77/120 (64.17%), Query Frame = 1

Query: 1   MDLRGLLHSVSYLLGNPN------------------EAHAYGEERSSKGKKGYE------ 60
           M LR  +HS  ++LG P                   E H+ G  RSSK   G +      
Sbjct: 1   MALRWFVHSACHVLGYPKDDHPNHLQHCNNMESYQKEGHSGGVIRSSKVSNGEQVSTQTA 60

Query: 61  ELCNSGFQMPLHYPRYKKSDYQKMEEWKLDLLLKEYGLSFEGSLEEKRAFAMGAFLWPDQ 97
           E+  SGFQMPLHYPRY K+DY+KMEEWK+D+LL+EYGLSF G+L+EKRA+AMGAFLWPDQ
Sbjct: 61  EMHLSGFQMPLHYPRYTKADYEKMEEWKVDMLLREYGLSFRGNLDEKRAYAMGAFLWPDQ 120

BLAST of CSPI06G32880 vs. TrEMBL
Match: B9SA77_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0863040 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.2e-24
Identity = 63/116 (54.31%), Postives = 76/116 (65.52%), Query Frame = 1

Query: 1   MDLRGLLHSV----------------SYLLGNPNEAHAYGEERSSKG----KKGYEELCN 60
           M LR LLHS                 S++LG PNE HA G  +S K     +   E   +
Sbjct: 1   MALRWLLHSACHVLGYPNNEASYRQGSHVLGYPNEQHANGVMKSGKPIAEMEVKMETYPS 60

Query: 61  SGFQMPLHYPRYKKSDYQKMEEWKLDLLLKEYGLSFEGSLEEKRAFAMGAFLWPDQ 97
            GFQ+PLHYPRY K+DYQKMEEW++D+LL+EYGLS +G+LEEKRAFAMG FLWPDQ
Sbjct: 61  GGFQLPLHYPRYTKTDYQKMEEWRVDMLLREYGLSIKGTLEEKRAFAMGTFLWPDQ 116

BLAST of CSPI06G32880 vs. TrEMBL
Match: I1MFQ9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G117600 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.1e-23
Identity = 63/116 (54.31%), Postives = 77/116 (66.38%), Query Frame = 1

Query: 1   MDLRGLLHSVSYLLGNPN---------EAHAY---GEERSSKG---KKGYEELCN----S 60
           M LR +LHS  ++LG P          +   Y   GE +S KG      + E+      S
Sbjct: 1   MALRWVLHSACHVLGYPTRNIEEEECKKIEGYSNIGEAKSVKGLSLSNNFNEVDQCYPCS 60

Query: 61  GFQMPLHYPRYKKSDYQKMEEWKLDLLLKEYGLSFEGSLEEKRAFAMGAFLWPDQN 98
           GFQMPLHYPRY K DY+ MEEWK+DLLLK+YGLSF+G+L+EKRAFAMGAFLWPDQ+
Sbjct: 61  GFQMPLHYPRYTKQDYESMEEWKVDLLLKQYGLSFKGTLDEKRAFAMGAFLWPDQD 116

BLAST of CSPI06G32880 vs. TrEMBL
Match: A0A0B2RLN7_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_009934 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 2.7e-23
Identity = 61/116 (52.59%), Postives = 73/116 (62.93%), Query Frame = 1

Query: 1   MDLRGLLHSVSYLLGNPN---------EAHAYGEERSSKGKKGYEELCN----------S 60
           M LR +LHS  ++LG P          +   Y     +K  KG     N          S
Sbjct: 1   MALRWVLHSACHVLGYPTRNIEEEECKKIEGYSNIGEAKSVKGLSLANNFNEVDQCYPCS 60

Query: 61  GFQMPLHYPRYKKSDYQKMEEWKLDLLLKEYGLSFEGSLEEKRAFAMGAFLWPDQN 98
           GFQMPLHYPRY K DY+ MEEWK+DLLLK+YGLSF+G+L+EKRAFAMGAFLWPDQ+
Sbjct: 61  GFQMPLHYPRYTKQDYESMEEWKVDLLLKQYGLSFKGTLDEKRAFAMGAFLWPDQD 116

BLAST of CSPI06G32880 vs. TAIR10
Match: AT5G55620.1 (AT5G55620.1 unknown protein)

HSP 1 Score: 93.6 bits (231), Expect = 7.2e-20
Identity = 40/56 (71.43%), Postives = 50/56 (89.29%), Query Frame = 1

Query: 41  SGFQMPLHYPRYKKSDYQKMEEWKLDLLLKEYGLSFEGSLEEKRAFAMGAFLWPDQ 97
           SGFQ+PLHYP+Y KSDY+ M++ +LDLLLK+YG SFEGSLE+KR FA+ +FLWPDQ
Sbjct: 45  SGFQVPLHYPKYSKSDYEVMDDLRLDLLLKQYGFSFEGSLEDKRVFAIESFLWPDQ 100

BLAST of CSPI06G32880 vs. TAIR10
Match: AT5G41761.1 (AT5G41761.1 unknown protein)

HSP 1 Score: 85.5 bits (210), Expect = 2.0e-17
Identity = 43/84 (51.19%), Postives = 55/84 (65.48%), Query Frame = 1

Query: 18 NEAHAYGE----ERSSKGKKGYEELCNSGFQMPLHYPRYKKSDYQKMEEWKLDLLLKEYG 77
          N +H  GE    E ++K      +  +S FQ+PLHYP+Y KSDY+KM EW+LD LL+EYG
Sbjct: 16 NRSHQDGEDQRNETATKINHDKPQNQSSSFQIPLHYPKYTKSDYEKMPEWQLDRLLREYG 75

Query: 78 LSFEGSLEEKRAFAMGAFLWPDQN 98
          L   G   EKR FA+GAFLW  +N
Sbjct: 76 LPVIGDSYEKRKFAIGAFLWSSEN 99

BLAST of CSPI06G32880 vs. TAIR10
Match: AT3G09950.1 (AT3G09950.1 unknown protein)

HSP 1 Score: 84.7 bits (208), Expect = 3.4e-17
Identity = 42/77 (54.55%), Postives = 54/77 (70.13%), Query Frame = 1

Query: 21 HAYGEER-SSKGKKGYEELCNSGFQMPLHYPRYKKSDYQKMEEWKLDLLLKEYGL--SFE 80
          HA  +E   +  K G  +  +SGF+MPLHYPRY K DY++MEEW+LDLLL EYGL    +
Sbjct: 13 HAKNQESVENLDKNGAVKAPSSGFKMPLHYPRYTKEDYEEMEEWRLDLLLSEYGLLAFHD 72

Query: 81 GSLEEKRAFAMGAFLWP 95
           +L EKRAFA+  F+WP
Sbjct: 73 NTLHEKRAFAIDTFIWP 89

BLAST of CSPI06G32880 vs. TAIR10
Match: AT3G55570.1 (AT3G55570.1 unknown protein)

HSP 1 Score: 78.6 bits (192), Expect = 2.4e-15
Identity = 40/78 (51.28%), Postives = 47/78 (60.26%), Query Frame = 1

Query: 16 NPNEAHAYGEERSSKGKKGYEELCNSGFQMPLHYPRYKKSDYQKMEEWKLDLLLKEYGLS 75
          N      Y +  + K  +G      S F+MPLHYPRY K DYQ M EWKLD +L +YGLS
Sbjct: 11 NKGNEEVYMDVENGKNGEG------SVFRMPLHYPRYSKEDYQDMPEWKLDRVLADYGLS 70

Query: 76 FEGSLEEKRAFAMGAFLW 94
            G L  KR FA+GAFLW
Sbjct: 71 TYGDLAHKRDFAIGAFLW 82

BLAST of CSPI06G32880 vs. TAIR10
Match: AT3G11405.1 (AT3G11405.1 unknown protein)

HSP 1 Score: 59.7 bits (143), Expect = 1.2e-09
Identity = 31/54 (57.41%), Postives = 36/54 (66.67%), Query Frame = 1

Query: 41  SGFQMPLHYPRYKKSDYQKMEEWKLDLLLKEYGLSFE-GSLEEKRAFAMGAFLW 94
           S FQMPL YP Y K  Y  M E +LD LLK YGL  + G+L  K+ FA+GAFLW
Sbjct: 55  SSFQMPLQYPNYAKEQYDIMSEEELDRLLKLYGLPTDIGNLSCKKEFAVGAFLW 108

BLAST of CSPI06G32880 vs. NCBI nr
Match: gi|778720128|ref|XP_011658113.1| (PREDICTED: uncharacterized protein LOC105435946 [Cucumis sativus])

HSP 1 Score: 206.5 bits (524), Expect = 2.2e-50
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1

Query: 1  MDLRGLLHSVSYLLGNPNEAHAYGEERSSKGKKGYEELCNSGFQMPLHYPRYKKSDYQKM 60
          MDLRGLLHSVSYLLGNPNEAHAYGEERSSKGKKGYEELCNSGFQMPLHYPRYKKSDYQKM
Sbjct: 1  MDLRGLLHSVSYLLGNPNEAHAYGEERSSKGKKGYEELCNSGFQMPLHYPRYKKSDYQKM 60

Query: 61 EEWKLDLLLKEYGLSFEGSLEEKRAFAMGAFLWPDQN 98
          EEWKLDLLLKEYGLSFEGSLEEKRAFAMGAFLWPDQN
Sbjct: 61 EEWKLDLLLKEYGLSFEGSLEEKRAFAMGAFLWPDQN 97

BLAST of CSPI06G32880 vs. NCBI nr
Match: gi|1000957640|ref|XP_015577098.1| (PREDICTED: uncharacterized protein LOC8282528 [Ricinus communis])

HSP 1 Score: 119.0 bits (297), Expect = 4.6e-24
Identity = 63/116 (54.31%), Postives = 76/116 (65.52%), Query Frame = 1

Query: 1   MDLRGLLHSV----------------SYLLGNPNEAHAYGEERSSKG----KKGYEELCN 60
           M LR LLHS                 S++LG PNE HA G  +S K     +   E   +
Sbjct: 1   MALRWLLHSACHVLGYPNNEASYRQGSHVLGYPNEQHANGVMKSGKPIAEMEVKMETYPS 60

Query: 61  SGFQMPLHYPRYKKSDYQKMEEWKLDLLLKEYGLSFEGSLEEKRAFAMGAFLWPDQ 97
            GFQ+PLHYPRY K+DYQKMEEW++D+LL+EYGLS +G+LEEKRAFAMG FLWPDQ
Sbjct: 61  GGFQLPLHYPRYTKTDYQKMEEWRVDMLLREYGLSIKGTLEEKRAFAMGTFLWPDQ 116

BLAST of CSPI06G32880 vs. NCBI nr
Match: gi|590627017|ref|XP_007026334.1| (Uncharacterized protein TCM_030413 [Theobroma cacao])

HSP 1 Score: 119.0 bits (297), Expect = 4.6e-24
Identity = 63/120 (52.50%), Postives = 77/120 (64.17%), Query Frame = 1

Query: 1   MDLRGLLHSVSYLLGNPN------------------EAHAYGEERSSKGKKGYE------ 60
           M LR  +HS  ++LG P                   E H+ G  RSSK   G +      
Sbjct: 1   MALRWFVHSACHVLGYPKDDHPNHLQHCNNMESYQKEGHSGGVIRSSKVSNGEQVSTQTA 60

Query: 61  ELCNSGFQMPLHYPRYKKSDYQKMEEWKLDLLLKEYGLSFEGSLEEKRAFAMGAFLWPDQ 97
           E+  SGFQMPLHYPRY K+DY+KMEEWK+D+LL+EYGLSF G+L+EKRA+AMGAFLWPDQ
Sbjct: 61  EMHLSGFQMPLHYPRYTKADYEKMEEWKVDMLLREYGLSFRGNLDEKRAYAMGAFLWPDQ 120

BLAST of CSPI06G32880 vs. NCBI nr
Match: gi|571517919|ref|XP_006597610.1| (PREDICTED: uncharacterized protein LOC102663856 [Glycine max])

HSP 1 Score: 116.3 bits (290), Expect = 3.0e-23
Identity = 63/116 (54.31%), Postives = 77/116 (66.38%), Query Frame = 1

Query: 1   MDLRGLLHSVSYLLGNPN---------EAHAY---GEERSSKG---KKGYEELCN----S 60
           M LR +LHS  ++LG P          +   Y   GE +S KG      + E+      S
Sbjct: 1   MALRWVLHSACHVLGYPTRNIEEEECKKIEGYSNIGEAKSVKGLSLSNNFNEVDQCYPCS 60

Query: 61  GFQMPLHYPRYKKSDYQKMEEWKLDLLLKEYGLSFEGSLEEKRAFAMGAFLWPDQN 98
           GFQMPLHYPRY K DY+ MEEWK+DLLLK+YGLSF+G+L+EKRAFAMGAFLWPDQ+
Sbjct: 61  GFQMPLHYPRYTKQDYESMEEWKVDLLLKQYGLSFKGTLDEKRAFAMGAFLWPDQD 116

BLAST of CSPI06G32880 vs. NCBI nr
Match: gi|734404432|gb|KHN32943.1| (hypothetical protein glysoja_009934 [Glycine soja])

HSP 1 Score: 115.9 bits (289), Expect = 3.9e-23
Identity = 61/116 (52.59%), Postives = 73/116 (62.93%), Query Frame = 1

Query: 1   MDLRGLLHSVSYLLGNPN---------EAHAYGEERSSKGKKGYEELCN----------S 60
           M LR +LHS  ++LG P          +   Y     +K  KG     N          S
Sbjct: 1   MALRWVLHSACHVLGYPTRNIEEEECKKIEGYSNIGEAKSVKGLSLANNFNEVDQCYPCS 60

Query: 61  GFQMPLHYPRYKKSDYQKMEEWKLDLLLKEYGLSFEGSLEEKRAFAMGAFLWPDQN 98
           GFQMPLHYPRY K DY+ MEEWK+DLLLK+YGLSF+G+L+EKRAFAMGAFLWPDQ+
Sbjct: 61  GFQMPLHYPRYTKQDYESMEEWKVDLLLKQYGLSFKGTLDEKRAFAMGAFLWPDQD 116

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KMW8_CUCSA1.5e-50100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G511080 PE=4 SV=1[more]
A0A061GHA6_THECC3.2e-2452.50Uncharacterized protein OS=Theobroma cacao GN=TCM_030413 PE=4 SV=1[more]
B9SA77_RICCO3.2e-2454.31Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0863040 PE=4 SV=1[more]
I1MFQ9_SOYBN2.1e-2354.31Uncharacterized protein OS=Glycine max GN=GLYMA_15G117600 PE=4 SV=1[more]
A0A0B2RLN7_GLYSO2.7e-2352.59Uncharacterized protein OS=Glycine soja GN=glysoja_009934 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G55620.17.2e-2071.43 unknown protein[more]
AT5G41761.12.0e-1751.19 unknown protein[more]
AT3G09950.13.4e-1754.55 unknown protein[more]
AT3G55570.12.4e-1551.28 unknown protein[more]
AT3G11405.11.2e-0957.41 unknown protein[more]
Match NameE-valueIdentityDescription
gi|778720128|ref|XP_011658113.1|2.2e-50100.00PREDICTED: uncharacterized protein LOC105435946 [Cucumis sativus][more]
gi|1000957640|ref|XP_015577098.1|4.6e-2454.31PREDICTED: uncharacterized protein LOC8282528 [Ricinus communis][more]
gi|590627017|ref|XP_007026334.1|4.6e-2452.50Uncharacterized protein TCM_030413 [Theobroma cacao][more]
gi|571517919|ref|XP_006597610.1|3.0e-2354.31PREDICTED: uncharacterized protein LOC102663856 [Glycine max][more]
gi|734404432|gb|KHN32943.1|3.9e-2352.59hypothetical protein glysoja_009934 [Glycine soja][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G32880.1CSPI06G32880.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33513FAMILY NOT NAMEDcoord: 36..96
score: 1.4
NoneNo IPR availablePANTHERPTHR33513:SF2SUBFAMILY NOT NAMEDcoord: 36..96
score: 1.4

The following gene(s) are paralogous to this gene:

None