CsaV3_6G004920 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAGGCAACTGCAAATCATACATTCTTCACAAGGCACAGCCCAGGTTGGCATGGCTGGTGTGAGCCTTCTCCTCTGTGCTTTTGCATTGTTCATGTGTGCTTCCCATGCCCGAAAATGGCGTCGCCGTTGGAATGCTTGCTTGGATTATGGATATGAGTTTGAGGATCCTGTCATAGAGTTGAACCAAGAAGCAACAGTTGTGACTACGCAACGAGTGAATACCACCGAGCCGGAGAATGGCAATGATGAGATGTTCTTCAGTAGAGAGCAACAAGCTTCTATGTGGCACAAGAACATTCTCATGGGTGGGAAATGCCAGCTACCGGACTTCTCAGGAGTCATATTATACGACCCCAATGGAAATGCTGTAACCCCTGCCAAAACTCCGCGTCCTTTACTAACCTGGAAGTGA ATGGCAAGGCAACTGCAAATCATACATTCTTCACAAGGCACAGCCCAGGTTGGCATGGCTGGTGTGAGCCTTCTCCTCTGTGCTTTTGCATTGTTCATGTGTGCTTCCCATGCCCGAAAATGGCGTCGCCGTTGGAATGCTTGCTTGGATTATGGATATGAGTTTGAGGATCCTGTCATAGAGTTGAACCAAGAAGCAACAGTTGTGACTACGCAACGAGTGAATACCACCGAGCCGGAGAATGGCAATGATGAGATGTTCTTCAGTAGAGAGCAACAAGCTTCTATGTGGCACAAGAACATTCTCATGGGTGGGAAATGCCAGCTACCGGACTTCTCAGGAGTCATATTATACGACCCCAATGGAAATGCTGTAACCCCTGCCAAAACTCCGCGTCCTTTACTAACCTGGAAGTGA ATGGCAAGGCAACTGCAAATCATACATTCTTCACAAGGCACAGCCCAGGTTGGCATGGCTGGTGTGAGCCTTCTCCTCTGTGCTTTTGCATTGTTCATGTGTGCTTCCCATGCCCGAAAATGGCGTCGCCGTTGGAATGCTTGCTTGGATTATGGATATGAGTTTGAGGATCCTGTCATAGAGTTGAACCAAGAAGCAACAGTTGTGACTACGCAACGAGTGAATACCACCGAGCCGGAGAATGGCAATGATGAGATGTTCTTCAGTAGAGAGCAACAAGCTTCTATGTGGCACAAGAACATTCTCATGGGTGGGAAATGCCAGCTACCGGACTTCTCAGGAGTCATATTATACGACCCCAATGGAAATGCTGTAACCCCTGCCAAAACTCCGCGTCCTTTACTAACCTGGAAGTGA MARQLQIIHSSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNTTEPENGNDEMFFSREQQASMWHKNILMGGKCQLPDFSGVILYDPNGNAVTPAKTPRPLLTWK
BLAST of CsaV3_6G004920 vs. NCBI nr
Match: XP_011656615.1 (PREDICTED: uncharacterized protein LOC105435757 [Cucumis sativus] >KGN46105.1 hypothetical protein Csa_6G052800 [Cucumis sativus]) HSP 1 Score: 291.2 bits (744), Expect = 1.9e-75 Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0
BLAST of CsaV3_6G004920 vs. NCBI nr
Match: XP_008456721.1 (PREDICTED: uncharacterized protein LOC103496580 [Cucumis melo]) HSP 1 Score: 275.8 bits (704), Expect = 8.1e-71 Identity = 130/138 (94.20%), Postives = 133/138 (96.38%), Query Frame = 0
BLAST of CsaV3_6G004920 vs. NCBI nr
Match: XP_022134433.1 (uncharacterized protein LOC111006683 [Momordica charantia]) HSP 1 Score: 260.4 bits (664), Expect = 3.5e-66 Identity = 122/138 (88.41%), Postives = 128/138 (92.75%), Query Frame = 0
BLAST of CsaV3_6G004920 vs. NCBI nr
Match: XP_023512486.1 (uncharacterized protein LOC111777221 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 255.4 bits (651), Expect = 1.1e-64 Identity = 125/144 (86.81%), Postives = 131/144 (90.97%), Query Frame = 0
BLAST of CsaV3_6G004920 vs. NCBI nr
Match: XP_022990795.1 (uncharacterized protein LOC111487577 [Cucurbita maxima]) HSP 1 Score: 252.3 bits (643), Expect = 9.6e-64 Identity = 124/144 (86.11%), Postives = 130/144 (90.28%), Query Frame = 0
BLAST of CsaV3_6G004920 vs. TAIR10
Match: AT1G71740.1 (unknown protein) HSP 1 Score: 102.1 bits (253), Expect = 2.9e-22 Identity = 58/124 (46.77%), Postives = 74/124 (59.68%), Query Frame = 0
BLAST of CsaV3_6G004920 vs. TAIR10
Match: AT1G49000.1 (unknown protein) HSP 1 Score: 54.7 bits (130), Expect = 5.3e-08 Identity = 25/68 (36.76%), Postives = 40/68 (58.82%), Query Frame = 0
BLAST of CsaV3_6G004920 vs. TAIR10
Match: AT3G18560.1 (unknown protein) HSP 1 Score: 48.9 bits (115), Expect = 2.9e-06 Identity = 21/47 (44.68%), Postives = 32/47 (68.09%), Query Frame = 0
BLAST of CsaV3_6G004920 vs. TAIR10
Match: AT3G14760.1 (unknown protein) HSP 1 Score: 43.1 bits (100), Expect = 1.6e-04 Identity = 17/28 (60.71%), Postives = 22/28 (78.57%), Query Frame = 0
BLAST of CsaV3_6G004920 vs. TrEMBL
Match: tr|A0A0A0K8P1|A0A0A0K8P1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052800 PE=4 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 1.2e-75 Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0
BLAST of CsaV3_6G004920 vs. TrEMBL
Match: tr|A0A1S3C3W7|A0A1S3C3W7_CUCME (uncharacterized protein LOC103496580 OS=Cucumis melo OX=3656 GN=LOC103496580 PE=4 SV=1) HSP 1 Score: 275.8 bits (704), Expect = 5.4e-71 Identity = 130/138 (94.20%), Postives = 133/138 (96.38%), Query Frame = 0
BLAST of CsaV3_6G004920 vs. TrEMBL
Match: tr|A0A2C9WHH4|A0A2C9WHH4_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G184300 PE=4 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 3.3e-36 Identity = 85/141 (60.28%), Postives = 99/141 (70.21%), Query Frame = 0
BLAST of CsaV3_6G004920 vs. TrEMBL
Match: tr|B9H7X5|B9H7X5_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G198200v3 PE=4 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 3.6e-35 Identity = 81/138 (58.70%), Postives = 96/138 (69.57%), Query Frame = 0
BLAST of CsaV3_6G004920 vs. TrEMBL
Match: tr|A0A067K1Q3|A0A067K1Q3_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_22269 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 3.1e-34 Identity = 79/139 (56.83%), Postives = 98/139 (70.50%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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