Cp4.1LG01g21370 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAGGCAGCTACAAATGATGATGCATTCTTCACAAGCCACAGCTCAGGTTGGCATGGCTGGTGCGAGCCTTCTCTTGTGTGCTTTTGCATTGTTTATGTGTGCTTCCCATGCTCGGAAATGGCGTCGTCGCTGGAATGCTTGCTTGGATTATGGCTACGAGTTTGAGGATCCTGTAATAGAGCTTAACCAAGAAGCGACAGTTGTGACTACGCAACGAGTGAATACCTGTGTTGTGAATGCCACTGAGCCGGAGAATGGCAACGACGAGATGTTCTTCAGTAGAGAGCAACGAGCTGCTGTATGGGAGAAGAACATACTCATGGGAGGGAAGTGTCAGCTACCGGACTTCTCGGGCGTCATATTATACGACTCCAATGGAAACGTCGTAACCCCTGCTAGAACTCAGCTTCCTCTACTCACCTGGAAGTGA ATGGCAAGGCAGCTACAAATGATGATGCATTCTTCACAAGCCACAGCTCAGGTTGGCATGGCTGGTGCGAGCCTTCTCTTGTGTGCTTTTGCATTGTTTATGTGTGCTTCCCATGCTCGGAAATGGCGTCGTCGCTGGAATGCTTGCTTGGATTATGGCTACGAGTTTGAGGATCCTGTAATAGAGCTTAACCAAGAAGCGACAGTTGTGACTACGCAACGAGTGAATACCTGTGTTGTGAATGCCACTGAGCCGGAGAATGGCAACGACGAGATGTTCTTCAGTAGAGAGCAACGAGCTGCTGTATGGGAGAAGAACATACTCATGGGAGGGAAGTGTCAGCTACCGGACTTCTCGGGCGTCATATTATACGACTCCAATGGAAACGTCGTAACCCCTGCTAGAACTCAGCTTCCTCTACTCACCTGGAAGTGA ATGGCAAGGCAGCTACAAATGATGATGCATTCTTCACAAGCCACAGCTCAGGTTGGCATGGCTGGTGCGAGCCTTCTCTTGTGTGCTTTTGCATTGTTTATGTGTGCTTCCCATGCTCGGAAATGGCGTCGTCGCTGGAATGCTTGCTTGGATTATGGCTACGAGTTTGAGGATCCTGTAATAGAGCTTAACCAAGAAGCGACAGTTGTGACTACGCAACGAGTGAATACCTGTGTTGTGAATGCCACTGAGCCGGAGAATGGCAACGACGAGATGTTCTTCAGTAGAGAGCAACGAGCTGCTGTATGGGAGAAGAACATACTCATGGGAGGGAAGTGTCAGCTACCGGACTTCTCGGGCGTCATATTATACGACTCCAATGGAAACGTCGTAACCCCTGCTAGAACTCAGCTTCCTCTACTCACCTGGAAGTGA MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNTCVVNATEPENGNDEMFFSREQRAAVWEKNILMGGKCQLPDFSGVILYDSNGNVVTPARTQLPLLTWK
BLAST of Cp4.1LG01g21370 vs. TrEMBL
Match: A0A0A0K8P1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G052800 PE=4 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 1.2e-64 Identity = 125/144 (86.81%), Postives = 131/144 (90.97%), Query Frame = 1
BLAST of Cp4.1LG01g21370 vs. TrEMBL
Match: B9H7X5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s22010g PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 3.6e-32 Identity = 80/144 (55.56%), Postives = 100/144 (69.44%), Query Frame = 1
BLAST of Cp4.1LG01g21370 vs. TrEMBL
Match: B9SM70_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0296460 PE=4 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 1.5e-30 Identity = 78/147 (53.06%), Postives = 96/147 (65.31%), Query Frame = 1
BLAST of Cp4.1LG01g21370 vs. TrEMBL
Match: U5GKQ4_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0002s06360g PE=4 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 1.5e-30 Identity = 74/126 (58.73%), Postives = 89/126 (70.63%), Query Frame = 1
BLAST of Cp4.1LG01g21370 vs. TrEMBL
Match: A0A067DCJ2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g048595mg PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 2.6e-30 Identity = 74/140 (52.86%), Postives = 93/140 (66.43%), Query Frame = 1
BLAST of Cp4.1LG01g21370 vs. TAIR10
Match: AT1G71740.1 (AT1G71740.1 unknown protein) HSP 1 Score: 107.8 bits (268), Expect = 5.5e-24 Identity = 61/129 (47.29%), Postives = 79/129 (61.24%), Query Frame = 1
BLAST of Cp4.1LG01g21370 vs. TAIR10
Match: AT1G49000.1 (AT1G49000.1 unknown protein) HSP 1 Score: 55.5 bits (132), Expect = 3.2e-08 Identity = 26/60 (43.33%), Postives = 37/60 (61.67%), Query Frame = 1
BLAST of Cp4.1LG01g21370 vs. NCBI nr
Match: gi|778710681|ref|XP_011656615.1| (PREDICTED: uncharacterized protein LOC105435757 [Cucumis sativus]) HSP 1 Score: 253.8 bits (647), Expect = 1.8e-64 Identity = 125/144 (86.81%), Postives = 131/144 (90.97%), Query Frame = 1
BLAST of Cp4.1LG01g21370 vs. NCBI nr
Match: gi|659113722|ref|XP_008456721.1| (PREDICTED: uncharacterized protein LOC103496580 [Cucumis melo]) HSP 1 Score: 245.4 bits (625), Expect = 6.3e-62 Identity = 121/144 (84.03%), Postives = 129/144 (89.58%), Query Frame = 1
BLAST of Cp4.1LG01g21370 vs. NCBI nr
Match: gi|224082514|ref|XP_002306724.1| (hypothetical protein POPTR_0005s22010g [Populus trichocarpa]) HSP 1 Score: 146.0 bits (367), Expect = 5.2e-32 Identity = 80/144 (55.56%), Postives = 100/144 (69.44%), Query Frame = 1
BLAST of Cp4.1LG01g21370 vs. NCBI nr
Match: gi|743902975|ref|XP_011044834.1| (PREDICTED: uncharacterized protein LOC105139898 [Populus euphratica]) HSP 1 Score: 145.6 bits (366), Expect = 6.7e-32 Identity = 80/144 (55.56%), Postives = 99/144 (68.75%), Query Frame = 1
BLAST of Cp4.1LG01g21370 vs. NCBI nr
Match: gi|255572301|ref|XP_002527089.1| (PREDICTED: uncharacterized protein LOC8281390 [Ricinus communis]) HSP 1 Score: 140.6 bits (353), Expect = 2.2e-30 Identity = 78/147 (53.06%), Postives = 96/147 (65.31%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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