CmaCh04G024700 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAGGCAACTACAAATGATGATGCATTCTTCACAAGCCACAGCTCAGGTTGGCATGGCTGGTGCGAGCCTTCTCTTGTGTGCTTTTGCATTGTTTATGTGTGCTTCCCATGCTCGGAAATGGCGTCGTCGCTGGAATGCTTGCTTGGATTATGGCTATGAGTTTGAGGATCCTGTAATAGAGCTTAACCAAGAAGCGACAGTAGTGACTACGCAACGAGTGAATACCTGTGTTGTGAATGCCACCGAGCCGGAGAATGACAACGACGAGATGTTCTTCAGCAGAGAGCAACGAGCTACTGTATGGGAGAAGAACATACTCATGGGTGGGAAGTGTCAACTACCGGACTTCTCGGGCGTCATATTATACGACTCCAATGGAAACGTCGTAACCCCTGCTAGAACTCAGTTTCCTCTACTCACCTGGAAGTGA ATGGCAAGGCAACTACAAATGATGATGCATTCTTCACAAGCCACAGCTCAGGTTGGCATGGCTGGTGCGAGCCTTCTCTTGTGTGCTTTTGCATTGTTTATGTGTGCTTCCCATGCTCGGAAATGGCGTCGTCGCTGGAATGCTTGCTTGGATTATGGCTATGAGTTTGAGGATCCTGTAATAGAGCTTAACCAAGAAGCGACAGTAGTGACTACGCAACGAGTGAATACCTGTGTTGTGAATGCCACCGAGCCGGAGAATGACAACGACGAGATGTTCTTCAGCAGAGAGCAACGAGCTACTGTATGGGAGAAGAACATACTCATGGGTGGGAAGTGTCAACTACCGGACTTCTCGGGCGTCATATTATACGACTCCAATGGAAACGTCGTAACCCCTGCTAGAACTCAGTTTCCTCTACTCACCTGGAAGTGA ATGGCAAGGCAACTACAAATGATGATGCATTCTTCACAAGCCACAGCTCAGGTTGGCATGGCTGGTGCGAGCCTTCTCTTGTGTGCTTTTGCATTGTTTATGTGTGCTTCCCATGCTCGGAAATGGCGTCGTCGCTGGAATGCTTGCTTGGATTATGGCTATGAGTTTGAGGATCCTGTAATAGAGCTTAACCAAGAAGCGACAGTAGTGACTACGCAACGAGTGAATACCTGTGTTGTGAATGCCACCGAGCCGGAGAATGACAACGACGAGATGTTCTTCAGCAGAGAGCAACGAGCTACTGTATGGGAGAAGAACATACTCATGGGTGGGAAGTGTCAACTACCGGACTTCTCGGGCGTCATATTATACGACTCCAATGGAAACGTCGTAACCCCTGCTAGAACTCAGTTTCCTCTACTCACCTGGAAGTGA MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNTCVVNATEPENDNDEMFFSREQRATVWEKNILMGGKCQLPDFSGVILYDSNGNVVTPARTQFPLLTWK
BLAST of CmaCh04G024700 vs. TrEMBL
Match: A0A0A0K8P1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G052800 PE=4 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 1.4e-63 Identity = 124/144 (86.11%), Postives = 130/144 (90.28%), Query Frame = 1
BLAST of CmaCh04G024700 vs. TrEMBL
Match: B9H7X5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s22010g PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 6.1e-32 Identity = 80/144 (55.56%), Postives = 100/144 (69.44%), Query Frame = 1
BLAST of CmaCh04G024700 vs. TrEMBL
Match: B9SM70_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0296460 PE=4 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 8.9e-31 Identity = 78/147 (53.06%), Postives = 96/147 (65.31%), Query Frame = 1
BLAST of CmaCh04G024700 vs. TrEMBL
Match: A0A067DCJ2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g048595mg PE=4 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 1.5e-30 Identity = 74/140 (52.86%), Postives = 93/140 (66.43%), Query Frame = 1
BLAST of CmaCh04G024700 vs. TrEMBL
Match: U5GKQ4_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0002s06360g PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 2.6e-30 Identity = 74/126 (58.73%), Postives = 89/126 (70.63%), Query Frame = 1
BLAST of CmaCh04G024700 vs. TAIR10
Match: AT1G71740.1 (AT1G71740.1 unknown protein) HSP 1 Score: 103.6 bits (257), Expect = 1.0e-22 Identity = 57/128 (44.53%), Postives = 76/128 (59.38%), Query Frame = 1
BLAST of CmaCh04G024700 vs. TAIR10
Match: AT1G49000.1 (AT1G49000.1 unknown protein) HSP 1 Score: 54.3 bits (129), Expect = 7.2e-08 Identity = 23/54 (42.59%), Postives = 34/54 (62.96%), Query Frame = 1
BLAST of CmaCh04G024700 vs. NCBI nr
Match: gi|778710681|ref|XP_011656615.1| (PREDICTED: uncharacterized protein LOC105435757 [Cucumis sativus]) HSP 1 Score: 250.4 bits (638), Expect = 1.9e-63 Identity = 124/144 (86.11%), Postives = 130/144 (90.28%), Query Frame = 1
BLAST of CmaCh04G024700 vs. NCBI nr
Match: gi|659113722|ref|XP_008456721.1| (PREDICTED: uncharacterized protein LOC103496580 [Cucumis melo]) HSP 1 Score: 247.3 bits (630), Expect = 1.6e-62 Identity = 122/144 (84.72%), Postives = 130/144 (90.28%), Query Frame = 1
BLAST of CmaCh04G024700 vs. NCBI nr
Match: gi|224082514|ref|XP_002306724.1| (hypothetical protein POPTR_0005s22010g [Populus trichocarpa]) HSP 1 Score: 145.2 bits (365), Expect = 8.8e-32 Identity = 80/144 (55.56%), Postives = 100/144 (69.44%), Query Frame = 1
BLAST of CmaCh04G024700 vs. NCBI nr
Match: gi|743902975|ref|XP_011044834.1| (PREDICTED: uncharacterized protein LOC105139898 [Populus euphratica]) HSP 1 Score: 144.8 bits (364), Expect = 1.2e-31 Identity = 80/144 (55.56%), Postives = 99/144 (68.75%), Query Frame = 1
BLAST of CmaCh04G024700 vs. NCBI nr
Match: gi|255572301|ref|XP_002527089.1| (PREDICTED: uncharacterized protein LOC8281390 [Ricinus communis]) HSP 1 Score: 141.4 bits (355), Expect = 1.3e-30 Identity = 78/147 (53.06%), Postives = 96/147 (65.31%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |