ClCG08G007250 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAGGCAGCTGCAAATGATGCATCCTTCACAAGGCACAGCTCAGATTGGCATGGCTGGTGTGAGCCTTCTCCTGTGTGCTTTTGCATTGTTCATGTGTGCTTCCCATGCCCGAAAATGGCGCCGTCGTTGGAATGCTTGCTTGGATTATGGTTACGAGTTTGAGGATCCTGTCATCGAGCTGAACCAAGAAGCAACGGTCGTGACTACGCAACGAGTGAATGCCTGTGTTGTGAATGCTGCCGAGTCGGAGAATGTCAATGATGAGATGTTCTTCAGCAGAGAGCAACAAGCTGCTATATGGCAGAAGAATATACTCATGGGCGGAAAGTGCCAGCTACCGGACTTCTCAGGTGTCATATTATATGACCCCAGTGGAAATGCTGTAACCCCTGCCAAAACTCAGCCTCCTTTACTCACCTGGAAGTGA ATGGCAAGGCAGCTGCAAATGATGCATCCTTCACAAGGCACAGCTCAGATTGGCATGGCTGGTGTGAGCCTTCTCCTGTGTGCTTTTGCATTGTTCATGTGTGCTTCCCATGCCCGAAAATGGCGCCGTCGTTGGAATGCTTGCTTGGATTATGGTTACGAGTTTGAGGATCCTGTCATCGAGCTGAACCAAGAAGCAACGGTCGTGACTACGCAACGAGTGAATGCCTGTGTTGTGAATGCTGCCGAGTCGGAGAATGTCAATGATGAGATGTTCTTCAGCAGAGAGCAACAAGCTGCTATATGGCAGAAGAATATACTCATGGGCGGAAAGTGCCAGCTACCGGACTTCTCAGGTGTCATATTATATGACCCCAGTGGAAATGCTGTAACCCCTGCCAAAACTCAGCCTCCTTTACTCACCTGGAAGTGA ATGGCAAGGCAGCTGCAAATGATGCATCCTTCACAAGGCACAGCTCAGATTGGCATGGCTGGTGTGAGCCTTCTCCTGTGTGCTTTTGCATTGTTCATGTGTGCTTCCCATGCCCGAAAATGGCGCCGTCGTTGGAATGCTTGCTTGGATTATGGTTACGAGTTTGAGGATCCTGTCATCGAGCTGAACCAAGAAGCAACGGTCGTGACTACGCAACGAGTGAATGCCTGTGTTGTGAATGCTGCCGAGTCGGAGAATGTCAATGATGAGATGTTCTTCAGCAGAGAGCAACAAGCTGCTATATGGCAGAAGAATATACTCATGGGCGGAAAGTGCCAGCTACCGGACTTCTCAGGTGTCATATTATATGACCCCAGTGGAAATGCTGTAACCCCTGCCAAAACTCAGCCTCCTTTACTCACCTGGAAGTGA MARQLQMMHPSQGTAQIGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNACVVNAAESENVNDEMFFSREQQAAIWQKNILMGGKCQLPDFSGVILYDPSGNAVTPAKTQPPLLTWK
BLAST of ClCG08G007250 vs. TrEMBL
Match: A0A0A0K8P1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G052800 PE=4 SV=1) HSP 1 Score: 256.1 bits (653), Expect = 2.5e-65 Identity = 124/143 (86.71%), Postives = 130/143 (90.91%), Query Frame = 1
BLAST of ClCG08G007250 vs. TrEMBL
Match: B9H7X5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s22010g PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 4.2e-33 Identity = 79/143 (55.24%), Postives = 97/143 (67.83%), Query Frame = 1
BLAST of ClCG08G007250 vs. TrEMBL
Match: A0A067DCJ2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g048595mg PE=4 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 1.6e-32 Identity = 79/144 (54.86%), Postives = 93/144 (64.58%), Query Frame = 1
BLAST of ClCG08G007250 vs. TrEMBL
Match: A0A067K1Q3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22269 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 6.1e-32 Identity = 79/145 (54.48%), Postives = 97/145 (66.90%), Query Frame = 1
BLAST of ClCG08G007250 vs. TrEMBL
Match: B9SM70_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0296460 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 6.1e-32 Identity = 80/146 (54.79%), Postives = 95/146 (65.07%), Query Frame = 1
BLAST of ClCG08G007250 vs. TAIR10
Match: AT1G71740.1 (AT1G71740.1 unknown protein) HSP 1 Score: 98.2 bits (243), Expect = 4.3e-21 Identity = 58/135 (42.96%), Postives = 71/135 (52.59%), Query Frame = 1
BLAST of ClCG08G007250 vs. TAIR10
Match: AT1G49000.1 (AT1G49000.1 unknown protein) HSP 1 Score: 50.4 bits (119), Expect = 1.0e-06 Identity = 22/54 (40.74%), Postives = 31/54 (57.41%), Query Frame = 1
BLAST of ClCG08G007250 vs. TAIR10
Match: AT3G18560.1 (AT3G18560.1 unknown protein) HSP 1 Score: 48.1 bits (113), Expect = 5.1e-06 Identity = 20/43 (46.51%), Postives = 27/43 (62.79%), Query Frame = 1
BLAST of ClCG08G007250 vs. NCBI nr
Match: gi|778710681|ref|XP_011656615.1| (PREDICTED: uncharacterized protein LOC105435757 [Cucumis sativus]) HSP 1 Score: 256.1 bits (653), Expect = 3.5e-65 Identity = 124/143 (86.71%), Postives = 130/143 (90.91%), Query Frame = 1
BLAST of ClCG08G007250 vs. NCBI nr
Match: gi|659113722|ref|XP_008456721.1| (PREDICTED: uncharacterized protein LOC103496580 [Cucumis melo]) HSP 1 Score: 249.6 bits (636), Expect = 3.3e-63 Identity = 121/143 (84.62%), Postives = 128/143 (89.51%), Query Frame = 1
BLAST of ClCG08G007250 vs. NCBI nr
Match: gi|743902975|ref|XP_011044834.1| (PREDICTED: uncharacterized protein LOC105139898 [Populus euphratica]) HSP 1 Score: 151.8 bits (382), Expect = 9.4e-34 Identity = 79/143 (55.24%), Postives = 100/143 (69.93%), Query Frame = 1
BLAST of ClCG08G007250 vs. NCBI nr
Match: gi|224082514|ref|XP_002306724.1| (hypothetical protein POPTR_0005s22010g [Populus trichocarpa]) HSP 1 Score: 149.1 bits (375), Expect = 6.1e-33 Identity = 79/143 (55.24%), Postives = 97/143 (67.83%), Query Frame = 1
BLAST of ClCG08G007250 vs. NCBI nr
Match: gi|568838285|ref|XP_006473145.1| (PREDICTED: uncharacterized protein LOC102611278 [Citrus sinensis]) HSP 1 Score: 147.1 bits (370), Expect = 2.3e-32 Identity = 79/144 (54.86%), Postives = 93/144 (64.58%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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