CmoCh04G025850 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAGGCAACTACAAATGATGATGCATTCTTCACAAGCCACAGCTCAGGTTGGCATGGCTGGTGCGAGCCTTCTCTTGTGTGCTTTTGCATTGTTTATGTGTGCTTCCCACGCTCGGAAATGGCGTCATCGCTGGAATGCTTGCTTGGATTATGGCTATGAGTTTGAGGATCCTGTAATAGAGCTTAACCAAGAAGCGACAGTCGTGACTACGCAACGAGTGAATACCTGTGTTGTGAATGCCCCCGAGCCGGAGAATGGCAACGACGAGATGTTCTTCAGCAGAGAGCAACGAGCTGCTGTGTGGGAGAAGAACATACTCATGGGTGGGAAGTGTCAGCTACCGGACTTCTCGGGCGTCATATTATACGACTCCAATGGAAACGTCGTAACCCCTGCTAGAACTCAGCTTCCTCTACTCACCTGGAAGTGA ATGGCAAGGCAACTACAAATGATGATGCATTCTTCACAAGCCACAGCTCAGGTTGGCATGGCTGGTGCGAGCCTTCTCTTGTGTGCTTTTGCATTGTTTATGTGTGCTTCCCACGCTCGGAAATGGCGTCATCGCTGGAATGCTTGCTTGGATTATGGCTATGAGTTTGAGGATCCTGTAATAGAGCTTAACCAAGAAGCGACAGTCGTGACTACGCAACGAGTGAATACCTGTGTTGTGAATGCCCCCGAGCCGGAGAATGGCAACGACGAGATGTTCTTCAGCAGAGAGCAACGAGCTGCTGTGTGGGAGAAGAACATACTCATGGGTGGGAAGTGTCAGCTACCGGACTTCTCGGGCGTCATATTATACGACTCCAATGGAAACGTCGTAACCCCTGCTAGAACTCAGCTTCCTCTACTCACCTGGAAGTGA ATGGCAAGGCAACTACAAATGATGATGCATTCTTCACAAGCCACAGCTCAGGTTGGCATGGCTGGTGCGAGCCTTCTCTTGTGTGCTTTTGCATTGTTTATGTGTGCTTCCCACGCTCGGAAATGGCGTCATCGCTGGAATGCTTGCTTGGATTATGGCTATGAGTTTGAGGATCCTGTAATAGAGCTTAACCAAGAAGCGACAGTCGTGACTACGCAACGAGTGAATACCTGTGTTGTGAATGCCCCCGAGCCGGAGAATGGCAACGACGAGATGTTCTTCAGCAGAGAGCAACGAGCTGCTGTGTGGGAGAAGAACATACTCATGGGTGGGAAGTGTCAGCTACCGGACTTCTCGGGCGTCATATTATACGACTCCAATGGAAACGTCGTAACCCCTGCTAGAACTCAGCTTCCTCTACTCACCTGGAAGTGA
BLAST of CmoCh04G025850 vs. TrEMBL
Match: A0A0A0K8P1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G052800 PE=4 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 1.4e-63 Identity = 123/144 (85.42%), Postives = 129/144 (89.58%), Query Frame = 1
BLAST of CmoCh04G025850 vs. TrEMBL
Match: B9H7X5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s22010g PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 2.8e-32 Identity = 80/144 (55.56%), Postives = 100/144 (69.44%), Query Frame = 1
BLAST of CmoCh04G025850 vs. TrEMBL
Match: B9SM70_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0296460 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 1.2e-30 Identity = 79/147 (53.74%), Postives = 97/147 (65.99%), Query Frame = 1
BLAST of CmoCh04G025850 vs. TrEMBL
Match: U5GKQ4_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0002s06360g PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 1.2e-30 Identity = 74/126 (58.73%), Postives = 89/126 (70.63%), Query Frame = 1
BLAST of CmoCh04G025850 vs. TrEMBL
Match: A0A067DCJ2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g048595mg PE=4 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 3.4e-30 Identity = 74/140 (52.86%), Postives = 93/140 (66.43%), Query Frame = 1
BLAST of CmoCh04G025850 vs. TAIR10
Match: AT1G71740.1 (AT1G71740.1 unknown protein) HSP 1 Score: 106.3 bits (264), Expect = 1.6e-23 Identity = 60/129 (46.51%), Postives = 78/129 (60.47%), Query Frame = 1
BLAST of CmoCh04G025850 vs. TAIR10
Match: AT1G49000.1 (AT1G49000.1 unknown protein) HSP 1 Score: 55.5 bits (132), Expect = 3.2e-08 Identity = 26/60 (43.33%), Postives = 37/60 (61.67%), Query Frame = 1
BLAST of CmoCh04G025850 vs. TAIR10
Match: AT3G18560.1 (AT3G18560.1 unknown protein) HSP 1 Score: 48.5 bits (114), Expect = 4.0e-06 Identity = 21/56 (37.50%), Postives = 31/56 (55.36%), Query Frame = 1
BLAST of CmoCh04G025850 vs. NCBI nr
Match: gi|778710681|ref|XP_011656615.1| (PREDICTED: uncharacterized protein LOC105435757 [Cucumis sativus]) HSP 1 Score: 250.4 bits (638), Expect = 1.9e-63 Identity = 123/144 (85.42%), Postives = 129/144 (89.58%), Query Frame = 1
BLAST of CmoCh04G025850 vs. NCBI nr
Match: gi|659113722|ref|XP_008456721.1| (PREDICTED: uncharacterized protein LOC103496580 [Cucumis melo]) HSP 1 Score: 241.9 bits (616), Expect = 6.9e-61 Identity = 119/144 (82.64%), Postives = 127/144 (88.19%), Query Frame = 1
BLAST of CmoCh04G025850 vs. NCBI nr
Match: gi|224082514|ref|XP_002306724.1| (hypothetical protein POPTR_0005s22010g [Populus trichocarpa]) HSP 1 Score: 146.4 bits (368), Expect = 4.0e-32 Identity = 80/144 (55.56%), Postives = 100/144 (69.44%), Query Frame = 1
BLAST of CmoCh04G025850 vs. NCBI nr
Match: gi|743902975|ref|XP_011044834.1| (PREDICTED: uncharacterized protein LOC105139898 [Populus euphratica]) HSP 1 Score: 146.0 bits (367), Expect = 5.2e-32 Identity = 80/144 (55.56%), Postives = 99/144 (68.75%), Query Frame = 1
BLAST of CmoCh04G025850 vs. NCBI nr
Match: gi|255572301|ref|XP_002527089.1| (PREDICTED: uncharacterized protein LOC8281390 [Ricinus communis]) HSP 1 Score: 141.0 bits (354), Expect = 1.7e-30 Identity = 79/147 (53.74%), Postives = 97/147 (65.99%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |