CsaV3_4G037080 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCCTTCCCTTTGCGATCGAGAGAGAGAGAGAGAGAGTTATTGAGCCTACTGGTGTGCCTTCGTGCTAGGGGTTTTCGTTGTTACAGTCCTCCCATGGCGCCTTCAGCTCCGTCAAGCTCAACACCTGAATTTCAAATGTCTAAAAAGCCACTTGGGTTATATGCTAACGCACTAAAACGCAAGGATAGTTTCATTCAGTTGTTGGCCATGACTGGTATTTTGCTTTTAAGCTTTCGATCTTTGGGTCAGAAGTACCGTATCAACGATCTTCAAGAAGACACTACGGCTCTCAAACAAGAACATGAAACCCTAGTTGACCGTATGAAGAACATCAAGCGCAGCCTCCTTCATGAGGCATCCCTCGAATCCACTGGCCACTTTGCATCCAGGCTTCGCCTTCTCTTCAGCGATGAAGATTGACTGCTTTAAGTCTTCAATCTGTGAGTTTCGTAGTGTATTTTCGTCATGCTTCTGCTCTGTACCCAATTGTTAACTCGATTTTTGAAATTTCCCTGCATTTTTGTTGTTGCAGTTTGTAACATTCCAGAATGCTTGGTGAAACTTTTTGTTTACTTGTTTTAATGCAATAAAGAGGTTAATTCAATCTTGGATGAGTTTTTGTTTTGTTCATTGTTTTTTGGTTATTCTGAATTGAATGGTTGAATTTGTTGTTTAAAGCGATACAAATCCCTAAACCCTATTGATTTAGGGTTTTATTGATTGTTCATCTTTCTAATAGACTCTGTTCCCACCGGGCTGCGCATTTATTGTGTATCATCATTCTTACCACTCGGTCATAGATAGAAATGGTAGAGTGAATGGGTGATTATACTTCAAGACTTCGAGCTCTGTAAAAATATGCTAAAAAAACATTGATTAAAAGTACTTTGGATGTTTTTGGAAACTTCCGAGTACCTGTAGGAAATTGTTCTTCCAGGCTGGTTCTTGATGTTTTAACGTCTTGTTTCTTCTTAAGACCCTTTCGACTAGAGATATCAAGAGATGGAAATTACTCTATACGGTTTTCAGGAAGAAATTTTTGTTTAGTTCGATATTGATTTAGATTGATTGATCATAGACAGCATCCCATTTTGTACCCATCTTTAACATTGTGGTTGGACGTCTAGCGGGCAGCATTAAGGTGGGTGTAACACAAGATGCACCTAAGTATTTTCTTGAAAGAATGACAGTTGAGAACAAGTTTGCTACTTGTCAGGAATAGGATGAAATTGTGAAACATCAGGTTTCTTTACCTTCAATTCAAGTATGTATCTGACTAATGTTAAAGCTCCTGGTTGTGTAATTTCTGGGAATTTTTTTGGCGCAAGGATACTACAAAGCTTATGTTGTGCTATTCTTGTGATGTAGGATATATTAATCTATTGTTTGGAGAGCTGCTGCTGATTGAAGAGCTAGACTTTGGGCTCATATCTTCAAAGACATTACTTATAAAACTGATTGTGCCCACCAACTAGCCCAAGGAAAACGCCAAGGGCACAGTTTCATATTCAAGTGATGGATAGTTTTTAGAAAATTTTATAGGGTAGAATAGATGTGCTGATTCTTCAAAAAGTTTCCATCAGTTAGAGAAAAGTTTGTTTTGTGCCCACGTGTTCTATGATGGCTGCACCATTATCCTTGCCTTAAAGAAAAAAAACTCGCAGGAAAAAATACTCACTCTAGGGTGCACCCTATACCCTATGGGACTTGAATGTGGACCACGATGTGCCAAGGTTGTATTACTTGTCTAACCCTATAACATTTGGGTGTCAAGAAAACTTAGTAATTACCTCTTAGCTCTTTATCAAAGTCATGATGGTTAAATTTTCGCTATTTGACGTAGTGCATTTGAGCTAATTCTCTCTAAAGATGTATTGCCTCTTTCTTCACATCACCCATGAGTCACGACCAAGTACAAGAACAATCACAATATAAGCTTTTTTCTGTTTGGACCCAGCTACTTAGGAGCATCATGTATGAACTGATTGGGTGTACCTTCAAACTTATGAGCATCATGTACCATCATCATGTACCACTGCATGCATCACTACACTCAATAAAGCTATTCAACGATCTATTGAGC ATGGCGCCTTCAGCTCCGTCAAGCTCAACACCTGAATTTCAAATGTCTAAAAAGCCACTTGGGTTATATGCTAACGCACTAAAACGCAAGGATAGTTTCATTCAGTTGTTGGCCATGACTGGTATTTTGCTTTTAAGCTTTCGATCTTTGGGTCAGAAGTACCGTATCAACGATCTTCAAGAAGACACTACGGCTCTCAAACAAGAACATGAAACCCTAGTTGACCGTATGAAGAACATCAAGCGCAGCCTCCTTCATGAGGCATCCCTCGAATCCACTGGCCACTTTGCATCCAGGCTTCGCCTTCTCTTCAGCGATGAAGATTGA ATGGCGCCTTCAGCTCCGTCAAGCTCAACACCTGAATTTCAAATGTCTAAAAAGCCACTTGGGTTATATGCTAACGCACTAAAACGCAAGGATAGTTTCATTCAGTTGTTGGCCATGACTGGTATTTTGCTTTTAAGCTTTCGATCTTTGGGTCAGAAGTACCGTATCAACGATCTTCAAGAAGACACTACGGCTCTCAAACAAGAACATGAAACCCTAGTTGACCGTATGAAGAACATCAAGCGCAGCCTCCTTCATGAGGCATCCCTCGAATCCACTGGCCACTTTGCATCCAGGCTTCGCCTTCTCTTCAGCGATGAAGATTGA MAPSAPSSSTPEFQMSKKPLGLYANALKRKDSFIQLLAMTGILLLSFRSLGQKYRINDLQEDTTALKQEHETLVDRMKNIKRSLLHEASLESTGHFASRLRLLFSDED
BLAST of CsaV3_4G037080 vs. NCBI nr
Match: XP_011654256.1 (PREDICTED: uncharacterized protein LOC105435327 [Cucumis sativus] >XP_011654257.1 PREDICTED: uncharacterized protein LOC105435327 [Cucumis sativus] >KGN55481.1 hypothetical protein Csa_4G653420 [Cucumis sativus]) HSP 1 Score: 206.8 bits (525), Expect = 3.6e-50 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of CsaV3_4G037080 vs. NCBI nr
Match: XP_008452927.1 (PREDICTED: uncharacterized protein LOC103493794 [Cucumis melo] >XP_008452928.1 PREDICTED: uncharacterized protein LOC103493794 [Cucumis melo]) HSP 1 Score: 188.7 bits (478), Expect = 1.0e-44 Identity = 100/108 (92.59%), Postives = 101/108 (93.52%), Query Frame = 0
BLAST of CsaV3_4G037080 vs. NCBI nr
Match: XP_022142735.1 (uncharacterized protein LOC111012778 [Momordica charantia] >XP_022142744.1 uncharacterized protein LOC111012778 [Momordica charantia]) HSP 1 Score: 183.3 bits (464), Expect = 4.3e-43 Identity = 94/108 (87.04%), Postives = 101/108 (93.52%), Query Frame = 0
BLAST of CsaV3_4G037080 vs. NCBI nr
Match: XP_023535555.1 (uncharacterized protein LOC111796960 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 179.1 bits (453), Expect = 8.1e-42 Identity = 94/108 (87.04%), Postives = 99/108 (91.67%), Query Frame = 0
BLAST of CsaV3_4G037080 vs. NCBI nr
Match: XP_022936518.1 (uncharacterized protein LOC111443106 [Cucurbita moschata]) HSP 1 Score: 178.3 bits (451), Expect = 1.4e-41 Identity = 94/108 (87.04%), Postives = 99/108 (91.67%), Query Frame = 0
BLAST of CsaV3_4G037080 vs. TAIR10
Match: AT1G20430.1 (unknown protein) HSP 1 Score: 110.5 bits (275), Expect = 6.4e-25 Identity = 61/114 (53.51%), Postives = 76/114 (66.67%), Query Frame = 0
BLAST of CsaV3_4G037080 vs. TrEMBL
Match: tr|A0A0A0L5S3|A0A0A0L5S3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G653420 PE=4 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 2.4e-50 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of CsaV3_4G037080 vs. TrEMBL
Match: tr|A0A1S3BW63|A0A1S3BW63_CUCME (uncharacterized protein LOC103493794 OS=Cucumis melo OX=3656 GN=LOC103493794 PE=4 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 6.8e-45 Identity = 100/108 (92.59%), Postives = 101/108 (93.52%), Query Frame = 0
BLAST of CsaV3_4G037080 vs. TrEMBL
Match: tr|A0A067KL49|A0A067KL49_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_08138 PE=4 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 2.9e-32 Identity = 78/107 (72.90%), Postives = 88/107 (82.24%), Query Frame = 0
BLAST of CsaV3_4G037080 vs. TrEMBL
Match: tr|A0A2I4G353|A0A2I4G353_9ROSI (uncharacterized protein LOC109004280 OS=Juglans regia OX=51240 GN=LOC109004280 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 1.6e-30 Identity = 74/108 (68.52%), Postives = 87/108 (80.56%), Query Frame = 0
BLAST of CsaV3_4G037080 vs. TrEMBL
Match: tr|W9RF20|W9RF20_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_011665 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 6.2e-30 Identity = 74/102 (72.55%), Postives = 83/102 (81.37%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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