CSPI04G26720 (gene) Wild cucumber (PI 183967)

NameCSPI04G26720
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionBnaC07g15390D protein
LocationChr4 : 23729928 .. 23732684 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTCCTTCCCTTTGCGATCGAGAGAGAGAGAGAGAGAGTTATTGAGCCGACTGGTGTGCCTTCGTGCTAGGGGTTTTCGTTGTTACAGTCCTCCCATGGCGCCTTCAGCTCCGTCAAGCTCAACACCTGAATTTCAAATGTCTAAAAAGCCACTTGGGTTATATGCTAACGCACTAAAACGCAAGGATAGTTTCATTCAGTTGTTGGCCATGACTGGTATTTTGCTTTTAAGCTTTCGATCTTTGGGTCAGAAGTACCGTATCAACGATCTTCAAGAAGACACTACGGCTCTCAAACAAGAACATGAAACCCTAGTTGACCGTATGAAGAACATCAAGCGCAGCCTCCTTCATGAGGCATCCCTCGAATCCACTGGCCACTTTGCATCCAGGCTTCGCCTTCTCTTCAGCGATGAAGATTGACTGCTTTAAGTCTTCAATCTGTGAGTTTCGTAGTGTATTTTCGTCATGCTTCTGCTCTGTACCCAATTGTTAACTCGATTTTTGAAATTTCCCTGCATTTTTGTTGTTGCAGTTTGTAACATTCCAGAATGCTTGGTGAAACTTTTTGTTTACTTGTTTTAATGCAATAAAGAGGTTAATTCAATCTTGGATGAGTTTTTGTTTTGTTCATTGTTTTTTGGTTATTCTGAATTGGATGGTTGAATTTGTTGTTTAAAGCGATACAAATCCCTAAACCCTATTGATTTAGGGTTTTATTGATTGTTCATCTTTCTAATAGACTTTGTTCCCACCGGGCTGCGCATTTATTGTGTATCATCATTCTTACCACTCGGTCATAGATAGAAATGGTAGAGTGAATGGGTGATTATACTTCAAGACTTCGAGCTCTGTAAAAATATGCTAAAAAAACATTGATTAAAAGTACTTTGGATGTTTTTGGAAACTTCCGAGTACCTGTAGGAAATTGTTCTTCCAGGCTGGTTCTTGATGTTTTAACGTCTTGTTTCTTCTTAAGACCCTTTCGACTAGAGATATCAAGAGATGGAAATTACTCTATACGGTTTTCAGGAAGAAATTTTTGTTTAGTTCGATATTGATTTAGATTGATTGATCATAGACAGCATCCCATTTTGTACCCATCTTTAACATTGTGGTTGGACGTCTAGCGGGCAGCATTAAGGTGGGTGTAACACAAGATGCACCTAAGTATTTTCTTGAAAGAATGACAGTTGAGAACAAGTTTGCTACTTGTCAGGAATAGGATGAAATTGTGAAACATCAGGTTTCTTTACCTTCAATTCAAGTATGTATCTGACTAATGTTAAAGCTCCTGGTTGTGTAATTTCTGGGAATTTTTTTGGCGCAAGGATACTACAAAGCTTATTTGTGCTATTCTTGTGATGTAGGATATATTAATCTATTGTTTGGAGAGCTGCTGCTGATTGAAGAGCTAGACTTTGGGCTCATATCTTCAAAGACATTACTTATAAAACTGATTGTGCCCACCAACTAGCCCAAGGAAAACGCCCAAGGGCACAGTCTCACACTCAAGTGATGGATAGTTTTTAGAAAATTTTATAGGGTAGAATAGATGTGCTGATTCTTCAAAAAGTTTCCATCAGTTAGAGAAAAGTTTGTTTTGTGCCCACGTGTTCTATGATGGCTGCACCATTATCCTTGCCTTAAAGAAAAAAAACTCGCAGGAAAAAATACTCACTCTAGGGTGCACCCTATACCCTATGGGACTTGAATGTGGACCACGATGTGCCAAGGTTGTATTACTTGTCTAACCCTATAACATTTGGGTGTCAAGAAAACTTAGTAATTACCTCTTAGCTCTTTATCAAAGTCACGATGGTCAAATTTTTGCCATTTGACGTAGTGCATTTGAGCTAATTCTCTCTAAAGATGTATTGCCTCTTTCTTCACATCACCCATGAGTCACGACCAAGTACAAGAACAATCACAATATAAGCTTTTTTCTGTTTGGACCCAGCTACTTAGGAGCATCATGTATGAACTGATTGGGTGTACCTTCAAACTTATGAGCATCATGTACCATCATCATGTACCACTGCATGCATCACTACACTCAATAAAGCTATTCAACGATCTATTGAGCTCATCTACATTCTTGCTTAACCTTCTTTCTCAGTACTTATTTTCTAAACCTCATCAACAGCACTGATCCTATTTCATAGCATTTGGGGTATTCTACTCTTAACAGTTGCTTACATTTTTTATGTTTAGCTTGCCTGGTCAAATGAAGTTTGTTGCCATTCAAAATTGTAAGCCAATGGTGAAATTTTTTCAATTATCTGTCTATTCCATTAATCGTATTGCGAAGAGGGACCCTATTAGAGAATCCAAACCTTGATTTGGAATGATTTGTAGCCATAATGAGCATTTGATTTGAGTTCAAATCCAATGGCGCGTTAACTTGAGCACTTTTGTAATGCTACAGGTTCTATAAACTTTGCCGCGTTTAGGGGTATCAGGTTGCTTGGCTTGGCGTTTTGGTTTATTCGATTGCATAATTATGTGGTATGGTTTCAATAATGTTCAGTCCACATGCAACAAAAGGGAAGGTTGGCAGCTGTCTGTGGGTCAGCCTTGTTTTGTAGTGATTATTTGAACTTATTATATCGTTTTAGCGCTTCTTGCGGAACGTTTTCAAATTCTAGATTTGACGCTTCCCTTCCTTTTTCCTTTCTTTTTTTTCAAATTCTCATAACAGGGCCTTTCTGTTGCTTTTGGTCGTTTCTTTATACTCAAAATGATCTTTTTGTTGGCT

mRNA sequence

ATGGCGCCTTCAGCTCCGTCAAGCTCAACACCTGAATTTCAAATGTCTAAAAAGCCACTTGGGTTATATGCTAACGCACTAAAACGCAAGGATAGTTTCATTCAGTTGTTGGCCATGACTGGTATTTTGCTTTTAAGCTTTCGATCTTTGGGTCAGAAGTACCGTATCAACGATCTTCAAGAAGACACTACGGCTCTCAAACAAGAACATGAAACCCTAGTTGACCGTATGAAGAACATCAAGCGCAGCCTCCTTCATGAGGCATCCCTCGAATCCACTGGCCACTTTGCATCCAGGCTTCGCCTTCTCTTCAGCGATGAAGATTGA

Coding sequence (CDS)

ATGGCGCCTTCAGCTCCGTCAAGCTCAACACCTGAATTTCAAATGTCTAAAAAGCCACTTGGGTTATATGCTAACGCACTAAAACGCAAGGATAGTTTCATTCAGTTGTTGGCCATGACTGGTATTTTGCTTTTAAGCTTTCGATCTTTGGGTCAGAAGTACCGTATCAACGATCTTCAAGAAGACACTACGGCTCTCAAACAAGAACATGAAACCCTAGTTGACCGTATGAAGAACATCAAGCGCAGCCTCCTTCATGAGGCATCCCTCGAATCCACTGGCCACTTTGCATCCAGGCTTCGCCTTCTCTTCAGCGATGAAGATTGA
BLAST of CSPI04G26720 vs. TrEMBL
Match: A0A0A0L5S3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G653420 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 1.3e-50
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1

Query: 1   MAPSAPSSSTPEFQMSKKPLGLYANALKRKDSFIQLLAMTGILLLSFRSLGQKYRINDLQ 60
           MAPSAPSSSTPEFQMSKKPLGLYANALKRKDSFIQLLAMTGILLLSFRSLGQKYRINDLQ
Sbjct: 1   MAPSAPSSSTPEFQMSKKPLGLYANALKRKDSFIQLLAMTGILLLSFRSLGQKYRINDLQ 60

Query: 61  EDTTALKQEHETLVDRMKNIKRSLLHEASLESTGHFASRLRLLFSDED 109
           EDTTALKQEHETLVDRMKNIKRSLLHEASLESTGHFASRLRLLFSDED
Sbjct: 61  EDTTALKQEHETLVDRMKNIKRSLLHEASLESTGHFASRLRLLFSDED 108

BLAST of CSPI04G26720 vs. TrEMBL
Match: A0A067KL49_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08138 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.6e-32
Identity = 78/107 (72.90%), Postives = 88/107 (82.24%), Query Frame = 1

Query: 1   MAPSAPSSSTPEFQMSKKPLGLYANALKRKDSFIQLLAMTGILLLSFRSLGQKYRINDLQ 60
           MA SAP  S    + S+KPLGL ANA+KRKDSFIQL AMTGILLLS RSLGQKYRI+ L+
Sbjct: 1   MASSAPPGSATATRSSRKPLGLIANAMKRKDSFIQLFAMTGILLLSVRSLGQKYRIHGLE 60

Query: 61  EDTTALKQEHETLVDRMKNIKRSLLHEASLESTGHFASRLRLLFSDE 108
           EDT+ALKQE +TL DR+ NIKR LLHEASLE TG FA+RLRLLF D+
Sbjct: 61  EDTSALKQEQQTLTDRLNNIKRGLLHEASLEPTGLFAARLRLLFGDD 107

BLAST of CSPI04G26720 vs. TrEMBL
Match: F6H0C7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g00460 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.6e-30
Identity = 78/109 (71.56%), Postives = 87/109 (79.82%), Query Frame = 1

Query: 1   MAPSAPSSSTPEFQM--SKKPLGLYANALKRKDSFIQLLAMTGILLLSFRSLGQKYRIND 60
           MA S+ SSS   FQ    KK LGL ANALKRKDSFIQ  AM+GI LLS RSLGQKYR+ND
Sbjct: 1   MASSSSSSSASNFQNPNKKKTLGLIANALKRKDSFIQFFAMSGIFLLSLRSLGQKYRLND 60

Query: 61  LQEDTTALKQEHETLVDRMKNIKRSLLHEASLESTGHFASRLRLLFSDE 108
           LQEDT +LK+E + L DRM +IKRSLLHEASL+STG FASRLRLLF D+
Sbjct: 61  LQEDTASLKEEQKGLHDRMNHIKRSLLHEASLDSTGLFASRLRLLFGDD 109

BLAST of CSPI04G26720 vs. TrEMBL
Match: W9RF20_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011665 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.3e-30
Identity = 74/102 (72.55%), Postives = 83/102 (81.37%), Query Frame = 1

Query: 7   SSSTPEFQMSKKPLGLYANALKRKDSFIQLLAMTGILLLSFRSLGQKYRINDLQEDTTAL 66
           SSS P  +  KKPL   ANA+KRKDSFIQ  AMTGILL+S RSLGQKYRI+DL EDT+ L
Sbjct: 5   SSSAPPGRNPKKPLAFSANAMKRKDSFIQFFAMTGILLMSVRSLGQKYRIHDLLEDTSDL 64

Query: 67  KQEHETLVDRMKNIKRSLLHEASLESTGHFASRLRLLFSDED 109
           K+E E L +RMKNIKR+LLHEASLE TG FASRLRLLF DE+
Sbjct: 65  KEEQEKLTERMKNIKRALLHEASLEPTGAFASRLRLLFGDEN 106

BLAST of CSPI04G26720 vs. TrEMBL
Match: A0A0D2U3G9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G000900 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 5.7e-30
Identity = 74/108 (68.52%), Postives = 85/108 (78.70%), Query Frame = 1

Query: 1   MAPSAPSSSTPEFQMSKKPLGLYANALKRKDSFIQLLAMTGILLLSFRSLGQKYRINDLQ 60
           MA SAP  S+   Q ++KPLG   NA+K K +FIQ  AMTGILLLS RSLGQKYRI+DLQ
Sbjct: 1   MASSAPPESSSTAQNARKPLGFMKNAVKYKHNFIQFFAMTGILLLSVRSLGQKYRIHDLQ 60

Query: 61  EDTTALKQEHETLVDRMKNIKRSLLHEASLESTGHFASRLRLLFSDED 109
           EDT ALKQE ++L DRM NIKR LLHEASLE +G FASRLRLLF D++
Sbjct: 61  EDTAALKQEQQSLNDRMSNIKRGLLHEASLEPSGRFASRLRLLFGDDN 108

BLAST of CSPI04G26720 vs. TAIR10
Match: AT1G20430.1 (AT1G20430.1 unknown protein)

HSP 1 Score: 110.5 bits (275), Expect = 6.4e-25
Identity = 61/114 (53.51%), Postives = 76/114 (66.67%), Query Frame = 1

Query: 1   MAPSAPSSST-------PEFQMSKKPLGLYANALKRKDSFIQLLAMTGILLLSFRSLGQK 60
           MA SAP  S        P   ++    G + N  K K SF Q  AMTGILLLSFRS+ QK
Sbjct: 1   MASSAPQGSVDPLTGKDPAKALTAVASGFFENVKKNKQSFFQFAAMTGILLLSFRSVSQK 60

Query: 61  YRINDLQEDTTALKQEHETLVDRMKNIKRSLLHEASLESTGHFASRLRLLFSDE 108
           YRI+DL+EDT  LK+E ++L DRM  IK  LLH+AS++S+G FASRLRLLF ++
Sbjct: 61  YRIHDLEEDTAVLKKEQDSLTDRMSKIKSDLLHQASIDSSGVFASRLRLLFGED 114

BLAST of CSPI04G26720 vs. NCBI nr
Match: gi|778697093|ref|XP_011654256.1| (PREDICTED: uncharacterized protein LOC105435327 [Cucumis sativus])

HSP 1 Score: 206.8 bits (525), Expect = 1.9e-50
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1

Query: 1   MAPSAPSSSTPEFQMSKKPLGLYANALKRKDSFIQLLAMTGILLLSFRSLGQKYRINDLQ 60
           MAPSAPSSSTPEFQMSKKPLGLYANALKRKDSFIQLLAMTGILLLSFRSLGQKYRINDLQ
Sbjct: 1   MAPSAPSSSTPEFQMSKKPLGLYANALKRKDSFIQLLAMTGILLLSFRSLGQKYRINDLQ 60

Query: 61  EDTTALKQEHETLVDRMKNIKRSLLHEASLESTGHFASRLRLLFSDED 109
           EDTTALKQEHETLVDRMKNIKRSLLHEASLESTGHFASRLRLLFSDED
Sbjct: 61  EDTTALKQEHETLVDRMKNIKRSLLHEASLESTGHFASRLRLLFSDED 108

BLAST of CSPI04G26720 vs. NCBI nr
Match: gi|659104383|ref|XP_008452927.1| (PREDICTED: uncharacterized protein LOC103493794 [Cucumis melo])

HSP 1 Score: 188.7 bits (478), Expect = 5.3e-45
Identity = 100/108 (92.59%), Postives = 101/108 (93.52%), Query Frame = 1

Query: 1   MAPSAPSSSTPEFQMSKKPLGLYANALKRKDSFIQLLAMTGILLLSFRSLGQKYRINDLQ 60
           MAPSAPSSSTPEFQMSKKPLG YAN LK KD  IQLLAMTGILLLS RSLGQKYRIN+LQ
Sbjct: 1   MAPSAPSSSTPEFQMSKKPLGFYANVLKHKDGLIQLLAMTGILLLSCRSLGQKYRINNLQ 60

Query: 61  EDTTALKQEHETLVDRMKNIKRSLLHEASLESTGHFASRLRLLFSDED 109
           EDTTALKQEHETLVDRMKNIKRSLLHEASLESTG FASRLRLLFSDED
Sbjct: 61  EDTTALKQEHETLVDRMKNIKRSLLHEASLESTGLFASRLRLLFSDED 108

BLAST of CSPI04G26720 vs. NCBI nr
Match: gi|802606418|ref|XP_012073693.1| (PREDICTED: uncharacterized protein LOC105635265 [Jatropha curcas])

HSP 1 Score: 146.7 bits (369), Expect = 2.3e-32
Identity = 78/107 (72.90%), Postives = 88/107 (82.24%), Query Frame = 1

Query: 1   MAPSAPSSSTPEFQMSKKPLGLYANALKRKDSFIQLLAMTGILLLSFRSLGQKYRINDLQ 60
           MA SAP  S    + S+KPLGL ANA+KRKDSFIQL AMTGILLLS RSLGQKYRI+ L+
Sbjct: 1   MASSAPPGSATATRSSRKPLGLIANAMKRKDSFIQLFAMTGILLLSVRSLGQKYRIHGLE 60

Query: 61  EDTTALKQEHETLVDRMKNIKRSLLHEASLESTGHFASRLRLLFSDE 108
           EDT+ALKQE +TL DR+ NIKR LLHEASLE TG FA+RLRLLF D+
Sbjct: 61  EDTSALKQEQQTLTDRLNNIKRGLLHEASLEPTGLFAARLRLLFGDD 107

BLAST of CSPI04G26720 vs. NCBI nr
Match: gi|657970898|ref|XP_008377212.1| (PREDICTED: uncharacterized protein LOC103440313 [Malus domestica])

HSP 1 Score: 141.4 bits (355), Expect = 9.6e-31
Identity = 76/108 (70.37%), Postives = 86/108 (79.63%), Query Frame = 1

Query: 1   MAPSAPSSSTPEFQMSKKPLGLYANALKRKDSFIQLLAMTGILLLSFRSLGQKYRINDLQ 60
           MA S P SS+   Q SKK LG  ANA+KRKDSFIQ  AMTGILLLS RSLGQKYR+++LQ
Sbjct: 1   MASSVPPSSSAGVQNSKKSLGFIANAVKRKDSFIQFFAMTGILLLSVRSLGQKYRLHNLQ 60

Query: 61  EDTTALKQEHETLVDRMKNIKRSLLHEASLESTGHFASRLRLLFSDED 109
           EDTTALK+E E L +R +NIKR LLHEASLE TG FASRLRLLF + +
Sbjct: 61  EDTTALKEEQEALAERTRNIKRDLLHEASLEPTGLFASRLRLLFGERE 108

BLAST of CSPI04G26720 vs. NCBI nr
Match: gi|225459810|ref|XP_002285914.1| (PREDICTED: uncharacterized protein LOC100247271 [Vitis vinifera])

HSP 1 Score: 139.4 bits (350), Expect = 3.7e-30
Identity = 78/109 (71.56%), Postives = 87/109 (79.82%), Query Frame = 1

Query: 1   MAPSAPSSSTPEFQM--SKKPLGLYANALKRKDSFIQLLAMTGILLLSFRSLGQKYRIND 60
           MA S+ SSS   FQ    KK LGL ANALKRKDSFIQ  AM+GI LLS RSLGQKYR+ND
Sbjct: 1   MASSSSSSSASNFQNPNKKKTLGLIANALKRKDSFIQFFAMSGIFLLSLRSLGQKYRLND 60

Query: 61  LQEDTTALKQEHETLVDRMKNIKRSLLHEASLESTGHFASRLRLLFSDE 108
           LQEDT +LK+E + L DRM +IKRSLLHEASL+STG FASRLRLLF D+
Sbjct: 61  LQEDTASLKEEQKGLHDRMNHIKRSLLHEASLDSTGLFASRLRLLFGDD 109

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L5S3_CUCSA1.3e-50100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G653420 PE=4 SV=1[more]
A0A067KL49_JATCU1.6e-3272.90Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08138 PE=4 SV=1[more]
F6H0C7_VITVI2.6e-3071.56Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g00460 PE=4 SV=... [more]
W9RF20_9ROSA3.3e-3072.55Uncharacterized protein OS=Morus notabilis GN=L484_011665 PE=4 SV=1[more]
A0A0D2U3G9_GOSRA5.7e-3068.52Uncharacterized protein OS=Gossypium raimondii GN=B456_010G000900 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G20430.16.4e-2553.51 unknown protein[more]
Match NameE-valueIdentityDescription
gi|778697093|ref|XP_011654256.1|1.9e-50100.00PREDICTED: uncharacterized protein LOC105435327 [Cucumis sativus][more]
gi|659104383|ref|XP_008452927.1|5.3e-4592.59PREDICTED: uncharacterized protein LOC103493794 [Cucumis melo][more]
gi|802606418|ref|XP_012073693.1|2.3e-3272.90PREDICTED: uncharacterized protein LOC105635265 [Jatropha curcas][more]
gi|657970898|ref|XP_008377212.1|9.6e-3170.37PREDICTED: uncharacterized protein LOC103440313 [Malus domestica][more]
gi|225459810|ref|XP_002285914.1|3.7e-3071.56PREDICTED: uncharacterized protein LOC100247271 [Vitis vinifera][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G26720.2CSPI04G26720.2mRNA
CSPI04G26720.1CSPI04G26720.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 56..76
scor
NoneNo IPR availablePANTHERPTHR36316FAMILY NOT NAMEDcoord: 1..104
score: 3.1
NoneNo IPR availablePANTHERPTHR36316:SF1SUBFAMILY NOT NAMEDcoord: 1..104
score: 3.1