CsaV3_4G036890 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTCTTTTCCCACGCTTTCCCCGCTCCTTCCACAGCCAACTGCCGCAATTATCTCTTCTCTCTCTCTCTCTCTCACTCTTATCTGTCCCCTTCCCTTCTTCACTCCTCTTCTTATTTTTCTCCCAATAATTCTCTATAAATATCTCTTCTATTTCTCTCCCCCATTTCCATCATCACTGCTTAACTCTCACCTCTCATCCATTTTTCATTACAAAACTTCCCATCTTCGTCACCATGTTCAACCACTACAATCCATTTTCCTTCACCCACAAGCTCAAATCCCCAATCTCTTGTTTCCGCCCCGATCACGATCCCGAATTACACGATAACCCTTCTTCTCCAACATCTCCTGCTCTCAAATCAATGACCTCTGACCTCCCGGAGCTCCGTGGAATGTGCCGGAGTCTTGTCGCTCGGATCAGCTGGCCGAGTCGCCGACGCTACCATCACTCCACTGATTTTCGATACGACCCTTCCAGCTATGCCCTTAATTTCGAGGACGAACAACTTCGATATGACGACGAGTTCCCAATTAGGGATTTCACTTCGAGATTGCCGGCGTCACCACCGCACGTAAATCTCATGCGATTTTGAAACCATGGGGTTGGGGATCTTCAGGGAGTCTCTACCCATTGATTCTAACTGTAATTTGCAATTTGCTAAAGGTGTTATTCGTAGAGCTAAATGTATAGATATCTAAAAAGCTCTCTAATTAATTATTAATTGTATATTCCTTCTATTGTTATTACTAATTTACTGATTATGTTTGCTTCTAATTTCGTTTAATTTCAATCAACCTTAGATTTAGTTAAATTACTGTTATGTGTACTGATTATTGTTGGTTATGATGAACTAAAAGATTTGGAAAAAGAGGACTAATCAATGCAGTAGTCATATAACTGAATTAAACCTCTTTAATTGATGAATTTGATAATGTTAATAAATATGTACAAACTATTAGTTTCTTCATTTTTCCACCAAATTCACAAAATCCAAACTTTTACAACTAATCAATATTTGTTCAAAAAAGTTTACAAACACTTAGAAAGTGCTCATATAGTGGATTATTAACTTAATCATTGTTATTAATACAGTTGAACATAAACTCTAAACTTTAATTTTTTTGTTTAGTAGGTTGATGAATTTCGGAAGAGGGAGTCGTGCATGTCGAAGTAGATAAAAAAGAAAGAGAAAGAGAGAACGAGGGGTATGAGAAAGTAAATAAAGAGAAAAAAAACTACATGCATTGTTGATATGCATAGGAGGCAATCAACGAGTGACAACTATTGATATATGTTGAATACATATATACATTTAGGAGGCAATGTTTGCCAAGCTTCCTTGTCCCCATGTCCTAAGTTCTTGCAATAGTTCATCGTCCATTTTGTTATTTTAAAAGAAAAAAAAGACCTATTAATTTACATAAATTATTTATAAATTTTAAATTAATGAATTAGTTTTCACTAAAAAAATTCATCAAAATGACTAGTGTTAGATTGAGTGTTTGAATATAAATTAAATTAATTAAAACAGAATAATTATCAATCAAATTATTCATAAAGATAACTATAGTGCAGAAAATGTTAGTGTTTGAATTTAAACATATTCGTTATTTTACCATTTAAATGTAATTTAAATATAATAATTATAATAACCAAACAATAGTGAC ATGTTCAACCACTACAATCCATTTTCCTTCACCCACAAGCTCAAATCCCCAATCTCTTGTTTCCGCCCCGATCACGATCCCGAATTACACGATAACCCTTCTTCTCCAACATCTCCTGCTCTCAAATCAATGACCTCTGACCTCCCGGAGCTCCGTGGAATGTGCCGGAGTCTTGTCGCTCGGATCAGCTGGCCGAGTCGCCGACGCTACCATCACTCCACTGATTTTCGATACGACCCTTCCAGCTATGCCCTTAATTTCGAGGACGAACAACTTCGATATGACGACGAGTTCCCAATTAGGGATTTCACTTCGAGATTGCCGGCGTCACCACCGCACGTAAATCTCATGCGATTTTGA ATGTTCAACCACTACAATCCATTTTCCTTCACCCACAAGCTCAAATCCCCAATCTCTTGTTTCCGCCCCGATCACGATCCCGAATTACACGATAACCCTTCTTCTCCAACATCTCCTGCTCTCAAATCAATGACCTCTGACCTCCCGGAGCTCCGTGGAATGTGCCGGAGTCTTGTCGCTCGGATCAGCTGGCCGAGTCGCCGACGCTACCATCACTCCACTGATTTTCGATACGACCCTTCCAGCTATGCCCTTAATTTCGAGGACGAACAACTTCGATATGACGACGAGTTCCCAATTAGGGATTTCACTTCGAGATTGCCGGCGTCACCACCGCACGTAAATCTCATGCGATTTTGA MFNHYNPFSFTHKLKSPISCFRPDHDPELHDNPSSPTSPALKSMTSDLPELRGMCRSLVARISWPSRRRYHHSTDFRYDPSSYALNFEDEQLRYDDEFPIRDFTSRLPASPPHVNLMRF
BLAST of CsaV3_4G036890 vs. NCBI nr
Match: KGN55462.1 (hypothetical protein Csa_4G652740 [Cucumis sativus]) HSP 1 Score: 255.8 bits (652), Expect = 7.5e-65 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of CsaV3_4G036890 vs. NCBI nr
Match: XP_008452891.1 (PREDICTED: uncharacterized protein LOC103493778 [Cucumis melo]) HSP 1 Score: 209.5 bits (532), Expect = 6.2e-51 Identity = 105/121 (86.78%), Postives = 109/121 (90.08%), Query Frame = 0
BLAST of CsaV3_4G036890 vs. NCBI nr
Match: XP_022940408.1 (uncharacterized protein LOC111446022 [Cucurbita moschata]) HSP 1 Score: 157.1 bits (396), Expect = 3.6e-35 Identity = 83/116 (71.55%), Postives = 91/116 (78.45%), Query Frame = 0
BLAST of CsaV3_4G036890 vs. NCBI nr
Match: XP_023523424.1 (uncharacterized protein LOC111787637 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 157.1 bits (396), Expect = 3.6e-35 Identity = 83/115 (72.17%), Postives = 92/115 (80.00%), Query Frame = 0
BLAST of CsaV3_4G036890 vs. NCBI nr
Match: XP_022981208.1 (uncharacterized protein LOC111480417 [Cucurbita maxima]) HSP 1 Score: 155.6 bits (392), Expect = 1.1e-34 Identity = 81/116 (69.83%), Postives = 90/116 (77.59%), Query Frame = 0
BLAST of CsaV3_4G036890 vs. TAIR10
Match: AT5G11070.1 (unknown protein) HSP 1 Score: 57.4 bits (137), Expect = 7.1e-09 Identity = 45/121 (37.19%), Postives = 60/121 (49.59%), Query Frame = 0
BLAST of CsaV3_4G036890 vs. TAIR10
Match: AT5G35090.1 (unknown protein) HSP 1 Score: 54.7 bits (130), Expect = 4.6e-08 Identity = 39/108 (36.11%), Postives = 53/108 (49.07%), Query Frame = 0
BLAST of CsaV3_4G036890 vs. TAIR10
Match: AT3G01430.1 (BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1)) HSP 1 Score: 41.2 bits (95), Expect = 5.3e-04 Identity = 19/36 (52.78%), Postives = 25/36 (69.44%), Query Frame = 0
BLAST of CsaV3_4G036890 vs. TrEMBL
Match: tr|A0A0A0L4E2|A0A0A0L4E2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652740 PE=4 SV=1) HSP 1 Score: 255.8 bits (652), Expect = 5.0e-65 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of CsaV3_4G036890 vs. TrEMBL
Match: tr|A0A1S3BVQ9|A0A1S3BVQ9_CUCME (uncharacterized protein LOC103493778 OS=Cucumis melo OX=3656 GN=LOC103493778 PE=4 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 4.1e-51 Identity = 105/121 (86.78%), Postives = 109/121 (90.08%), Query Frame = 0
BLAST of CsaV3_4G036890 vs. TrEMBL
Match: tr|A0A2I4ES19|A0A2I4ES19_9ROSI (uncharacterized protein LOC108992173 OS=Juglans regia OX=51240 GN=LOC108992173 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 3.6e-15 Identity = 62/125 (49.60%), Postives = 75/125 (60.00%), Query Frame = 0
BLAST of CsaV3_4G036890 vs. TrEMBL
Match: tr|A0A2P4IPA0|A0A2P4IPA0_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_29721 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 5.2e-14 Identity = 60/128 (46.88%), Postives = 77/128 (60.16%), Query Frame = 0
BLAST of CsaV3_4G036890 vs. TrEMBL
Match: tr|W9RJD0|W9RJD0_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_008530 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 2.6e-13 Identity = 46/86 (53.49%), Postives = 60/86 (69.77%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |