CsaV3_4G006870 (gene) Cucumber (Chinese Long) v3

NameCsaV3_4G006870
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4 : 4671786 .. 4673102 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCCTTTATCAAGACCTTCATTTTCATCTTCCTCATCATCTTCATGTTCCCTAATTCAGGTATACTGTAGATTAGATATTCGAGTTCATTTACTAATTTTTCTATCATTTTGTTTTTTTGTTTGAAAACAAGTGTACATCACTTCATAAGAATTAGGGTTTTGTAAAAAAATTGTTGTCCTAACTTTAATTTATATCTTTTTCAATTGAGATCATCTCACAAATTACTTTAGGGTTTAGATCTCTCTATCCGGGTCAGTGTTCAAAAATGGAAACTAGGGTTCCATAATTTTGCAATTTATTTTTTCTCCCTTTTTTTTGTAGGGGACGCTCATGACCTGAGCTTGAAGAAGGGTTTGAAGCTTTCAAACCCTTGTGGACAGGTGAGAAAAACCCTAATCTGGATTCTTTTTCAAACATTCCAAGTGGAGATCAAACTATCAACATTTAAATTTGAACTTGATTCTATTATATATACTCAACAATTAAACTTCAAAATTTGAAACCTAATTGTCGTTTGAGGTGCATGTTCAACTTCTTTATGTTTTGGAAAATTCTTAAGCTTCTATTAACAACTTAGCTAGTTTTCGAGTTCAAATGTTCGCCCATATTTGTACTTAATTTAAAAAGTTCTTTACAAAATAACTAAGCTTAGGGTTTGAACGATCTAGAGAAGCACTTGGGTTTGGGTTTAGAAAATTGTGGATAAATTAAAAACTCTTTTCTTAAAAGAAAATTGAGAAGCAAATAAAATTTATTTTGATTTTAATTTATCAACGTTCGTGGATTTGCCTAACAAATTAACCCTAGATGAGCAACCATGAGTTCGGCTTTAAAACCTAACCTTTTCACTCCAAACACATTCTTAAAGCTATTGATTTGCATTTGAAATAAACCGTTAGACGTTTTTCTTTGAAAAAGATGCGTTGGATCAGGTATACCCGAACATGTCCACTAGATGGACACCCCTTAGAATCTTCATCATTCCCACTTTCATTAATATAGAAAGAACTAGTACAACAAGAGACAATACAAATATAAAATATTAATATCCACATCAAGATAACTCAAATTTAGCAATAAATCAAGAAACATATCATGCATCCATTTATATCAATGCATGAATGAACAAATTAAACCAGGTATAAAATCATTTATAATTGACCATACTCTTGAAATTACAGTTGATAGTTGAAAAGAACAACAAAGTGACAAGAAAGCTTTTGGGAGCAGAAGCATTTGCAGACTATGCAAGCCCAGATCATAACACAAGACATGAGCCAAGGTTTGGAAACCCCGGAGGTAGAGCTTAA

mRNA sequence

ATGGCTGCCTTTATCAAGACCTTCATTTTCATCTTCCTCATCATCTTCATGTTCCCTAATTCAGGGGACGCTCATGACCTGAGCTTGAAGAAGGGTTTGAAGCTTTCAAACCCTTGTGGACAGTTGATAGTTGAAAAGAACAACAAAGTGACAAGAAAGCTTTTGGGAGCAGAAGCATTTGCAGACTATGCAAGCCCAGATCATAACACAAGACATGAGCCAAGGTTTGGAAACCCCGGAGGTAGAGCTTAA

Coding sequence (CDS)

ATGGCTGCCTTTATCAAGACCTTCATTTTCATCTTCCTCATCATCTTCATGTTCCCTAATTCAGGGGACGCTCATGACCTGAGCTTGAAGAAGGGTTTGAAGCTTTCAAACCCTTGTGGACAGTTGATAGTTGAAAAGAACAACAAAGTGACAAGAAAGCTTTTGGGAGCAGAAGCATTTGCAGACTATGCAAGCCCAGATCATAACACAAGACATGAGCCAAGGTTTGGAAACCCCGGAGGTAGAGCTTAA

Protein sequence

MAAFIKTFIFIFLIIFMFPNSGDAHDLSLKKGLKLSNPCGQLIVEKNNKVTRKLLGAEAFADYASPDHNTRHEPRFGNPGGRA
BLAST of CsaV3_4G006870 vs. NCBI nr
Match: KGN53437.1 (hypothetical protein Csa_4G055320 [Cucumis sativus])

HSP 1 Score: 171.0 bits (432), Expect = 1.7e-39
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0

Query: 1  MAAFIKTFIFIFLIIFMFPNSGDAHDLSLKKGLKLSNPCGQLIVEKNNKVTRKLLGAEAF 60
          MAAFIKTFIFIFLIIFMFPNSGDAHDLSLKKGLKLSNPCGQLIVEKNNKVTRKLLGAEAF
Sbjct: 1  MAAFIKTFIFIFLIIFMFPNSGDAHDLSLKKGLKLSNPCGQLIVEKNNKVTRKLLGAEAF 60

Query: 61 ADYASPDHNTRHEPRFGNPGGRA 84
          ADYASPDHNTRHEPRFGNPGGRA
Sbjct: 61 ADYASPDHNTRHEPRFGNPGGRA 83

BLAST of CsaV3_4G006870 vs. TrEMBL
Match: tr|A0A0A0KYH7|A0A0A0KYH7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G055320 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.1e-39
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0

Query: 1  MAAFIKTFIFIFLIIFMFPNSGDAHDLSLKKGLKLSNPCGQLIVEKNNKVTRKLLGAEAF 60
          MAAFIKTFIFIFLIIFMFPNSGDAHDLSLKKGLKLSNPCGQLIVEKNNKVTRKLLGAEAF
Sbjct: 1  MAAFIKTFIFIFLIIFMFPNSGDAHDLSLKKGLKLSNPCGQLIVEKNNKVTRKLLGAEAF 60

Query: 61 ADYASPDHNTRHEPRFGNPGGRA 84
          ADYASPDHNTRHEPRFGNPGGRA
Sbjct: 61 ADYASPDHNTRHEPRFGNPGGRA 83

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN53437.11.7e-39100.00hypothetical protein Csa_4G055320 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0KYH7|A0A0A0KYH7_CUCSA1.1e-39100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G055320 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G006870.1CsaV3_4G006870.1mRNA