CsaV3_2G006630 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGGCATGTTTATAGACCACGTTCTAAATAAGTCTTTCAATTCTCCTTCTTCACACTGTGAACTTCAAAAGCAAAGAGACGAAGCACAACCCACCGACGATTCGCCGGAGCCACCGCCGGAGCTGAATAAACTCTCAATTCTGACTACAATACACTGACAAACGAAGTCAGACAAACTACGACCTTTTTCTTGCATGGCAATGGCCGGATTCAATTCTCCGACCTTCTTCCTGATCTGCGCCGCCGTGTTTCTTATCTTCAGCTGTTCCTCAACCACCGTCCACGCCGGTCTAGGGATCCAACACAGTCTTGCATGGATTCCTAATCAATCTACCTGTAAGGGCTCCATAGCGGAGTGTTTCGGGGGAGAGGAGTTCGAATTTGATTCAGAAATCAACCGCCGTATCTTGGCAACTAGCCAGTACATCAGCTACGGCGCTCTACGAAGGAACAACGTGCCGTGCTCAAGACGTGGTGCATCTTATTACAATTGTCAGCCCGGAGCTCAGGCCAATCCCTATAGCCGTGGATGCAACGCCATTACGAGGTGCAGGAGTTGAGTAATTTGTTTGTACTCTTTGTTTAATAATCCCTCTCTCCTTTTCAATGTTCATTGATCTTTTTCCCCCCTTTCTTTATCTTTTCTTTGATATGGCTATTGGCTTTGATTGTTATACAAATTGAAAAAGGGGATATTGATCATATAGTGTCGTTCTTGTTGTTGTAAGTGTTGAAAGTTGTCGTGTGTTAATTAATTATATATCTCTGCTCAATAATTTGGTAGTCTTTTAGTGGCTTGATTGTTCATCCTTCTTTCTGTTCCTTTTTCCATGGAAGGGAAAAGGAGGAATCGGCAAAGAAAATGAGGAAGAAAACAGACTGTAATTAGTTGAAATTAGGGAGAATCATGAGGATGAATTGATTGTTATTTTGAGTATAGTTCTCTCCTAGAAAATCTCAATGATTGTGTTTCGGGTCTTGTTTTTGGGTTTAGATGAACTTCACATGGTCATTTCTTTCCATTTTCTTGTTTTCTGTTTCTCTTTCATCTTATATTTGCGGCAAAGAATCTTGAACTCTTTAGGGAAAGTATTTAGAGAAAAAAAATTCTAGGAGAAAGCATACTGCCATTTTCATTTTTGGTGCTCTTGAATGAGCTATACTGTTTAGGTTATGTATTTTACTTTAAACCCATCCTGCATTATTAGGATATGTATATATCTGTCAATTGATTGTGGTCTACTTAGTTTGAGTACGTTACCGATGATGATTATGCATTCTATATGTATAACTTCTTCTGGGTCTTGAATGTTTTCGGGCAACGGTTTCAAACTCAGTGGTGTCGTGGTGGCCATCTATGTAGGATGTTGAATGTTCTTCTACTACACTAATTTTTGGTTGGTTGTTTTATGAGATCAGTGGAGTTGTACATTATGTGGATTGGAAACTATATACATCTATGATCTATCTATTTGAGTAAAGGTAAAGATATGTTTTTCTGAATTGTTAAGACTTGAAAGGTGGAGATTTTAAAGTTAAAAGTGTGCCCTCTTGAATACAAATGAGAGTCCCAAATAATTGAGGGTATGATTAGGCTTCTTGGTGAAGGGAATTGAATTTGGCTGAGATTTGAGAAGTGGTTGTGATGTCCTGTTTGTTGTTTGATTTGACACGCTGAGGAAGAAAGCTAGATGTTGGATGGATATTATATCTTTTTTGAGTTTGGTATGATTTTGACATGCCAATTTCCCATTTCCCCTTTTTCATAGTTTAGATGTCAGTTATGTATATGTATATAAACCATGGGTTAGGAATATTTCTGAAGAAAGAAAATCCAAAATTAGAAAACCTCACACGACCTTACTTGAACATGATAGGTTGTAGAGATGAAAGCGCCACCATATTTGACAGCTACTATTTCCTACTTTACCAACCAAACTCTACCAACTGATCGTATGATAGCTTACAAAACAATATCTCCTTATCCTTTCCCTTTCCCCC ATGGCAATGGCCGGATTCAATTCTCCGACCTTCTTCCTGATCTGCGCCGCCGTGTTTCTTATCTTCAGCTGTTCCTCAACCACCGTCCACGCCGGTCTAGGGATCCAACACAGTCTTGCATGGATTCCTAATCAATCTACCTGTAAGGGCTCCATAGCGGAGTGTTTCGGGGGAGAGGAGTTCGAATTTGATTCAGAAATCAACCGCCGTATCTTGGCAACTAGCCAGTACATCAGCTACGGCGCTCTACGAAGGAACAACGTGCCGTGCTCAAGACGTGGTGCATCTTATTACAATTGTCAGCCCGGAGCTCAGGCCAATCCCTATAGCCGTGGATGCAACGCCATTACGAGGTTGTAG ATGGCAATGGCCGGATTCAATTCTCCGACCTTCTTCCTGATCTGCGCCGCCGTGTTTCTTATCTTCAGCTGTTCCTCAACCACCGTCCACGCCGGTCTAGGGATCCAACACAGTCTTGCATGGATTCCTAATCAATCTACCTGTAAGGGCTCCATAGCGGAGTGTTTCGGGGGAGAGGAGTTCGAATTTGATTCAGAAATCAACCGCCGTATCTTGGCAACTAGCCAGTACATCAGCTACGGCGCTCTACGAAGGAACAACGTGCCGTGCTCAAGACGTGGTGCATCTTATTACAATTGTCAGCCCGGAGCTCAGGCCAATCCCTATAGCCGTGGATGCAACGCCATTACGAGGTTGTAG MAMAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEEFEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRL
BLAST of CsaV3_2G006630 vs. NCBI nr
Match: KGN60955.1 (hypothetical protein Csa_2G031140 [Cucumis sativus]) HSP 1 Score: 246.9 bits (629), Expect = 3.5e-62 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of CsaV3_2G006630 vs. NCBI nr
Match: XP_022937540.1 (protein RALF-like 33 [Cucurbita moschata]) HSP 1 Score: 229.9 bits (585), Expect = 4.4e-57 Identity = 108/118 (91.53%), Postives = 113/118 (95.76%), Query Frame = 0
BLAST of CsaV3_2G006630 vs. NCBI nr
Match: XP_022966015.1 (protein RALF-like 33 [Cucurbita maxima] >XP_023537429.1 protein RALF-like 33 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 228.0 bits (580), Expect = 1.7e-56 Identity = 107/118 (90.68%), Postives = 112/118 (94.92%), Query Frame = 0
BLAST of CsaV3_2G006630 vs. NCBI nr
Match: XP_022150733.1 (protein RALF-like 33 [Momordica charantia]) HSP 1 Score: 218.0 bits (554), Expect = 1.7e-53 Identity = 103/118 (87.29%), Postives = 112/118 (94.92%), Query Frame = 0
BLAST of CsaV3_2G006630 vs. NCBI nr
Match: XP_022999036.1 (protein RALF-like 33 [Cucurbita maxima]) HSP 1 Score: 215.3 bits (547), Expect = 1.1e-52 Identity = 102/116 (87.93%), Postives = 108/116 (93.10%), Query Frame = 0
BLAST of CsaV3_2G006630 vs. TAIR10
Match: AT4G15800.1 (ralf-like 33) HSP 1 Score: 130.6 bits (327), Expect = 6.6e-31 Identity = 67/97 (69.07%), Postives = 76/97 (78.35%), Query Frame = 0
BLAST of CsaV3_2G006630 vs. TAIR10
Match: AT1G02900.1 (rapid alkalinization factor 1) HSP 1 Score: 127.9 bits (320), Expect = 4.3e-30 Identity = 69/113 (61.06%), Postives = 79/113 (69.91%), Query Frame = 0
BLAST of CsaV3_2G006630 vs. TAIR10
Match: AT3G16570.1 (rapid alkalinization factor 23) HSP 1 Score: 122.5 bits (306), Expect = 1.8e-28 Identity = 61/93 (65.59%), Postives = 70/93 (75.27%), Query Frame = 0
BLAST of CsaV3_2G006630 vs. TAIR10
Match: AT3G05490.1 (ralf-like 22) HSP 1 Score: 119.4 bits (298), Expect = 1.5e-27 Identity = 57/74 (77.03%), Postives = 63/74 (85.14%), Query Frame = 0
BLAST of CsaV3_2G006630 vs. TAIR10
Match: AT2G33775.1 (ralf-like 19) HSP 1 Score: 82.4 bits (202), Expect = 2.1e-16 Identity = 45/81 (55.56%), Postives = 54/81 (66.67%), Query Frame = 0
BLAST of CsaV3_2G006630 vs. Swiss-Prot
Match: sp|Q8L9P8|RLF33_ARATH (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 1.2e-29 Identity = 67/97 (69.07%), Postives = 76/97 (78.35%), Query Frame = 0
BLAST of CsaV3_2G006630 vs. Swiss-Prot
Match: sp|Q9SRY3|RLF1_ARATH (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 7.7e-29 Identity = 69/113 (61.06%), Postives = 79/113 (69.91%), Query Frame = 0
BLAST of CsaV3_2G006630 vs. Swiss-Prot
Match: sp|Q945T0|RALF_TOBAC (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 2.5e-27 Identity = 66/114 (57.89%), Postives = 79/114 (69.30%), Query Frame = 0
BLAST of CsaV3_2G006630 vs. Swiss-Prot
Match: sp|Q9LUS7|RLF23_ARATH (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 3.2e-27 Identity = 61/93 (65.59%), Postives = 70/93 (75.27%), Query Frame = 0
BLAST of CsaV3_2G006630 vs. Swiss-Prot
Match: sp|Q9MA62|RLF22_ARATH (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 2.7e-26 Identity = 57/74 (77.03%), Postives = 63/74 (85.14%), Query Frame = 0
BLAST of CsaV3_2G006630 vs. TrEMBL
Match: tr|A0A0A0LFW9|A0A0A0LFW9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G031140 PE=4 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 2.3e-62 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of CsaV3_2G006630 vs. TrEMBL
Match: tr|A0A2C9VHY5|A0A2C9VHY5_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_08G118000 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 1.0e-38 Identity = 83/110 (75.45%), Postives = 93/110 (84.55%), Query Frame = 0
BLAST of CsaV3_2G006630 vs. TrEMBL
Match: tr|A0A2I4GPT3|A0A2I4GPT3_9ROSI (protein RALF-like 33 OS=Juglans regia OX=51240 GN=LOC109009756 PE=4 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 3.1e-35 Identity = 82/117 (70.09%), Postives = 92/117 (78.63%), Query Frame = 0
BLAST of CsaV3_2G006630 vs. TrEMBL
Match: tr|A5BUA5|A5BUA5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_037723 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.2e-34 Identity = 77/114 (67.54%), Postives = 90/114 (78.95%), Query Frame = 0
BLAST of CsaV3_2G006630 vs. TrEMBL
Match: tr|F6HDF3|F6HDF3_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0020g01490 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.2e-34 Identity = 77/114 (67.54%), Postives = 90/114 (78.95%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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