CsaV3_2G006630 (gene) Cucumber (Chinese Long) v3

NameCsaV3_2G006630
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionRapid ALkalinization Factor
Locationchr2 : 3245269 .. 3247268 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGCATGTTTATAGACCACGTTCTAAATAAGTCTTTCAATTCTCCTTCTTCACACTGTGAACTTCAAAAGCAAAGAGACGAAGCACAACCCACCGACGATTCGCCGGAGCCACCGCCGGAGCTGAATAAACTCTCAATTCTGACTACAATACACTGACAAACGAAGTCAGACAAACTACGACCTTTTTCTTGCATGGCAATGGCCGGATTCAATTCTCCGACCTTCTTCCTGATCTGCGCCGCCGTGTTTCTTATCTTCAGCTGTTCCTCAACCACCGTCCACGCCGGTCTAGGGATCCAACACAGTCTTGCATGGATTCCTAATCAATCTACCTGTAAGGGCTCCATAGCGGAGTGTTTCGGGGGAGAGGAGTTCGAATTTGATTCAGAAATCAACCGCCGTATCTTGGCAACTAGCCAGTACATCAGCTACGGCGCTCTACGAAGGAACAACGTGCCGTGCTCAAGACGTGGTGCATCTTATTACAATTGTCAGCCCGGAGCTCAGGCCAATCCCTATAGCCGTGGATGCAACGCCATTACGAGGTGCAGGAGTTGAGTAATTTGTTTGTACTCTTTGTTTAATAATCCCTCTCTCCTTTTCAATGTTCATTGATCTTTTTCCCCCCTTTCTTTATCTTTTCTTTGATATGGCTATTGGCTTTGATTGTTATACAAATTGAAAAAGGGGATATTGATCATATAGTGTCGTTCTTGTTGTTGTAAGTGTTGAAAGTTGTCGTGTGTTAATTAATTATATATCTCTGCTCAATAATTTGGTAGTCTTTTAGTGGCTTGATTGTTCATCCTTCTTTCTGTTCCTTTTTCCATGGAAGGGAAAAGGAGGAATCGGCAAAGAAAATGAGGAAGAAAACAGACTGTAATTAGTTGAAATTAGGGAGAATCATGAGGATGAATTGATTGTTATTTTGAGTATAGTTCTCTCCTAGAAAATCTCAATGATTGTGTTTCGGGTCTTGTTTTTGGGTTTAGATGAACTTCACATGGTCATTTCTTTCCATTTTCTTGTTTTCTGTTTCTCTTTCATCTTATATTTGCGGCAAAGAATCTTGAACTCTTTAGGGAAAGTATTTAGAGAAAAAAAATTCTAGGAGAAAGCATACTGCCATTTTCATTTTTGGTGCTCTTGAATGAGCTATACTGTTTAGGTTATGTATTTTACTTTAAACCCATCCTGCATTATTAGGATATGTATATATCTGTCAATTGATTGTGGTCTACTTAGTTTGAGTACGTTACCGATGATGATTATGCATTCTATATGTATAACTTCTTCTGGGTCTTGAATGTTTTCGGGCAACGGTTTCAAACTCAGTGGTGTCGTGGTGGCCATCTATGTAGGATGTTGAATGTTCTTCTACTACACTAATTTTTGGTTGGTTGTTTTATGAGATCAGTGGAGTTGTACATTATGTGGATTGGAAACTATATACATCTATGATCTATCTATTTGAGTAAAGGTAAAGATATGTTTTTCTGAATTGTTAAGACTTGAAAGGTGGAGATTTTAAAGTTAAAAGTGTGCCCTCTTGAATACAAATGAGAGTCCCAAATAATTGAGGGTATGATTAGGCTTCTTGGTGAAGGGAATTGAATTTGGCTGAGATTTGAGAAGTGGTTGTGATGTCCTGTTTGTTGTTTGATTTGACACGCTGAGGAAGAAAGCTAGATGTTGGATGGATATTATATCTTTTTTGAGTTTGGTATGATTTTGACATGCCAATTTCCCATTTCCCCTTTTTCATAGTTTAGATGTCAGTTATGTATATGTATATAAACCATGGGTTAGGAATATTTCTGAAGAAAGAAAATCCAAAATTAGAAAACCTCACACGACCTTACTTGAACATGATAGGTTGTAGAGATGAAAGCGCCACCATATTTGACAGCTACTATTTCCTACTTTACCAACCAAACTCTACCAACTGATCGTATGATAGCTTACAAAACAATATCTCCTTATCCTTTCCCTTTCCCCC

mRNA sequence

ATGGCAATGGCCGGATTCAATTCTCCGACCTTCTTCCTGATCTGCGCCGCCGTGTTTCTTATCTTCAGCTGTTCCTCAACCACCGTCCACGCCGGTCTAGGGATCCAACACAGTCTTGCATGGATTCCTAATCAATCTACCTGTAAGGGCTCCATAGCGGAGTGTTTCGGGGGAGAGGAGTTCGAATTTGATTCAGAAATCAACCGCCGTATCTTGGCAACTAGCCAGTACATCAGCTACGGCGCTCTACGAAGGAACAACGTGCCGTGCTCAAGACGTGGTGCATCTTATTACAATTGTCAGCCCGGAGCTCAGGCCAATCCCTATAGCCGTGGATGCAACGCCATTACGAGGTTGTAG

Coding sequence (CDS)

ATGGCAATGGCCGGATTCAATTCTCCGACCTTCTTCCTGATCTGCGCCGCCGTGTTTCTTATCTTCAGCTGTTCCTCAACCACCGTCCACGCCGGTCTAGGGATCCAACACAGTCTTGCATGGATTCCTAATCAATCTACCTGTAAGGGCTCCATAGCGGAGTGTTTCGGGGGAGAGGAGTTCGAATTTGATTCAGAAATCAACCGCCGTATCTTGGCAACTAGCCAGTACATCAGCTACGGCGCTCTACGAAGGAACAACGTGCCGTGCTCAAGACGTGGTGCATCTTATTACAATTGTCAGCCCGGAGCTCAGGCCAATCCCTATAGCCGTGGATGCAACGCCATTACGAGGTTGTAG

Protein sequence

MAMAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEEFEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRL
BLAST of CsaV3_2G006630 vs. NCBI nr
Match: KGN60955.1 (hypothetical protein Csa_2G031140 [Cucumis sativus])

HSP 1 Score: 246.9 bits (629), Expect = 3.5e-62
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0

Query: 1   MAMAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEE 60
           MAMAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEE
Sbjct: 1   MAMAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEE 60

Query: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITR 119
           FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITR
Sbjct: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITR 118

BLAST of CsaV3_2G006630 vs. NCBI nr
Match: XP_022937540.1 (protein RALF-like 33 [Cucurbita moschata])

HSP 1 Score: 229.9 bits (585), Expect = 4.4e-57
Identity = 108/118 (91.53%), Postives = 113/118 (95.76%), Query Frame = 0

Query: 1   MAMAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEE 60
           MAMAGFNS TFFLICAAVF++FSCSST VH GLGIQHSL WIPNQSTCKG+IAECFGGEE
Sbjct: 1   MAMAGFNSSTFFLICAAVFVVFSCSSTAVHGGLGIQHSLGWIPNQSTCKGTIAECFGGEE 60

Query: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITR 119
           FEFDSEI+RRILATSQYISYGALRRN VPCSRRGASYYNCQPGAQANPYSRGC+AITR
Sbjct: 61  FEFDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITR 118

BLAST of CsaV3_2G006630 vs. NCBI nr
Match: XP_022966015.1 (protein RALF-like 33 [Cucurbita maxima] >XP_023537429.1 protein RALF-like 33 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 228.0 bits (580), Expect = 1.7e-56
Identity = 107/118 (90.68%), Postives = 112/118 (94.92%), Query Frame = 0

Query: 1   MAMAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEE 60
           MAMAGFNS TFFLICAAVF++FSCSST VH GLGI HSL WIPNQSTCKG+IAECFGGEE
Sbjct: 1   MAMAGFNSSTFFLICAAVFVVFSCSSTAVHGGLGIHHSLGWIPNQSTCKGTIAECFGGEE 60

Query: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITR 119
           FEFDSEI+RRILATSQYISYGALRRN VPCSRRGASYYNCQPGAQANPYSRGC+AITR
Sbjct: 61  FEFDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITR 118

BLAST of CsaV3_2G006630 vs. NCBI nr
Match: XP_022150733.1 (protein RALF-like 33 [Momordica charantia])

HSP 1 Score: 218.0 bits (554), Expect = 1.7e-53
Identity = 103/118 (87.29%), Postives = 112/118 (94.92%), Query Frame = 0

Query: 1   MAMAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEE 60
           MAMAGF+SPT FLICAAVF++F+CSST VH GLGI HSLAWIP+QS+CKGSIAECFGGEE
Sbjct: 1   MAMAGFHSPT-FLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEE 60

Query: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITR 119
           FEFDSEI+RRILATSQYISYGAL+RN VPCSRRGASYYNCQPGAQANPY RGC+AITR
Sbjct: 61  FEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITR 117

BLAST of CsaV3_2G006630 vs. NCBI nr
Match: XP_022999036.1 (protein RALF-like 33 [Cucurbita maxima])

HSP 1 Score: 215.3 bits (547), Expect = 1.1e-52
Identity = 102/116 (87.93%), Postives = 108/116 (93.10%), Query Frame = 0

Query: 3   MAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEEFE 62
           MAGFNSPTF LICA VF++FS SST V   LGIQHS+AWIPNQ+TCKGSIAECFGGEEFE
Sbjct: 1   MAGFNSPTFLLICATVFVVFSFSSTAVLGSLGIQHSVAWIPNQATCKGSIAECFGGEEFE 60

Query: 63  FDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITR 119
           FDSEI+RRILATSQYISYGALRRN VPCSRRGASYYNCQPGAQANPYSRGC+AITR
Sbjct: 61  FDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITR 116

BLAST of CsaV3_2G006630 vs. TAIR10
Match: AT4G15800.1 (ralf-like 33)

HSP 1 Score: 130.6 bits (327), Expect = 6.6e-31
Identity = 67/97 (69.07%), Postives = 76/97 (78.35%), Query Frame = 0

Query: 28  TVH---AGLGIQHSLAWIPNQSTCKGSIAEC---FGGEEFEFDSEINRRILATSQYISYG 87
           TVH   A +  Q S  ++P +S C G+IAEC      EEFE DSEINRRILAT++YISYG
Sbjct: 17  TVHFLFAAVTSQSSGDFVPIESKCNGTIAECSLSTAEEEFEMDSEINRRILATTKYISYG 76

Query: 88  ALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITR 119
           ALRRN VPCSRRGASYYNC+ GAQANPYSRGC+AITR
Sbjct: 77  ALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITR 113

BLAST of CsaV3_2G006630 vs. TAIR10
Match: AT1G02900.1 (rapid alkalinization factor 1)

HSP 1 Score: 127.9 bits (320), Expect = 4.3e-30
Identity = 69/113 (61.06%), Postives = 79/113 (69.91%), Query Frame = 0

Query: 10  TFFLICAAVFLIFSCSSTTVHAGLGIQ-HSLAWI---PNQSTCKGSIAECFGGEEFEFDS 69
           T FL    + ++F  SS  V AG       +AW     N S C GSIAEC G EE E DS
Sbjct: 6   TLFL-TLTILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHGSIAECIGAEEEEMDS 65

Query: 70  EINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITR 119
           EINRRILAT++YISY +L+RN+VPCSRRGASYYNCQ GAQANPYSRGC+ I R
Sbjct: 66  EINRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIAR 117

BLAST of CsaV3_2G006630 vs. TAIR10
Match: AT3G16570.1 (rapid alkalinization factor 23)

HSP 1 Score: 122.5 bits (306), Expect = 1.8e-28
Identity = 61/93 (65.59%), Postives = 70/93 (75.27%), Query Frame = 0

Query: 43  PNQSTCKGSIAEC-------------FG----GEEFEFDSEINRRILATSQYISYGALRR 102
           P ++ C+G+IAEC             +G    GEEFE DSEINRRILAT +YISYGALRR
Sbjct: 42  PFETECRGTIAECSVSAALGDGGDLFYGGGEMGEEFEMDSEINRRILATRRYISYGALRR 101

Query: 103 NNVPCSRRGASYYNCQPGAQANPYSRGCNAITR 119
           N +PCSRRGASYYNC+ GAQANPYSRGC+AITR
Sbjct: 102 NTIPCSRRGASYYNCRRGAQANPYSRGCSAITR 134

BLAST of CsaV3_2G006630 vs. TAIR10
Match: AT3G05490.1 (ralf-like 22)

HSP 1 Score: 119.4 bits (298), Expect = 1.5e-27
Identity = 57/74 (77.03%), Postives = 63/74 (85.14%), Query Frame = 0

Query: 46  STCKGSIAECFG-GEEFEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGA 105
           S C GSIAEC    EE EFDS+I+RRILA  +YISYGA+RRN+VPCSRRGASYYNCQ GA
Sbjct: 43  SGCTGSIAECIAEEEEMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGA 102

Query: 106 QANPYSRGCNAITR 119
           QANPYSRGC+ ITR
Sbjct: 103 QANPYSRGCSTITR 116

BLAST of CsaV3_2G006630 vs. TAIR10
Match: AT2G33775.1 (ralf-like 19)

HSP 1 Score: 82.4 bits (202), Expect = 2.1e-16
Identity = 45/81 (55.56%), Postives = 54/81 (66.67%), Query Frame = 0

Query: 41  WIPNQSTCKGSIAECFG--GE-EFEFDSEINRRILATSQ-YISYGALRRNNVPCSRRGAS 100
           W   +S   G    C G  GE ++  DSE NRR LA  + YISYGALR+NNVPCSRRG S
Sbjct: 25  WTLTKSCVNGQ--GCIGEDGELDYLMDSETNRRQLAARRSYISYGALRKNNVPCSRRGRS 84

Query: 101 YYNCQPGAQANPYSRGCNAIT 118
           YY+C+   +ANPY RGC+ IT
Sbjct: 85  YYDCKKRKRANPYRRGCSVIT 103

BLAST of CsaV3_2G006630 vs. Swiss-Prot
Match: sp|Q8L9P8|RLF33_ARATH (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.2e-29
Identity = 67/97 (69.07%), Postives = 76/97 (78.35%), Query Frame = 0

Query: 28  TVH---AGLGIQHSLAWIPNQSTCKGSIAEC---FGGEEFEFDSEINRRILATSQYISYG 87
           TVH   A +  Q S  ++P +S C G+IAEC      EEFE DSEINRRILAT++YISYG
Sbjct: 17  TVHFLFAAVTSQSSGDFVPIESKCNGTIAECSLSTAEEEFEMDSEINRRILATTKYISYG 76

Query: 88  ALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITR 119
           ALRRN VPCSRRGASYYNC+ GAQANPYSRGC+AITR
Sbjct: 77  ALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITR 113

BLAST of CsaV3_2G006630 vs. Swiss-Prot
Match: sp|Q9SRY3|RLF1_ARATH (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 7.7e-29
Identity = 69/113 (61.06%), Postives = 79/113 (69.91%), Query Frame = 0

Query: 10  TFFLICAAVFLIFSCSSTTVHAGLGIQ-HSLAWI---PNQSTCKGSIAECFGGEEFEFDS 69
           T FL    + ++F  SS  V AG       +AW     N S C GSIAEC G EE E DS
Sbjct: 6   TLFL-TLTILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHGSIAECIGAEEEEMDS 65

Query: 70  EINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITR 119
           EINRRILAT++YISY +L+RN+VPCSRRGASYYNCQ GAQANPYSRGC+ I R
Sbjct: 66  EINRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIAR 117

BLAST of CsaV3_2G006630 vs. Swiss-Prot
Match: sp|Q945T0|RALF_TOBAC (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.5e-27
Identity = 66/114 (57.89%), Postives = 79/114 (69.30%), Query Frame = 0

Query: 9   PTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWI-PNQS--TCKGSIAECFG-GEEFEFD 68
           P+  ++C  +   F        A  G   +  W+ P +S   CKGSI EC    EEFE D
Sbjct: 4   PSGLILCVLIGAFFISM-----AAAGDSGAYDWVMPARSGGGCKGSIGECIAEEEEFELD 63

Query: 69  SEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITR 119
           SE NRRILAT +YISYGAL++N+VPCSRRGASYYNC+PGAQANPYSRGC+AITR
Sbjct: 64  SESNRRILATKKYISYGALQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAITR 112

BLAST of CsaV3_2G006630 vs. Swiss-Prot
Match: sp|Q9LUS7|RLF23_ARATH (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.2e-27
Identity = 61/93 (65.59%), Postives = 70/93 (75.27%), Query Frame = 0

Query: 43  PNQSTCKGSIAEC-------------FG----GEEFEFDSEINRRILATSQYISYGALRR 102
           P ++ C+G+IAEC             +G    GEEFE DSEINRRILAT +YISYGALRR
Sbjct: 42  PFETECRGTIAECSVSAALGDGGDLFYGGGEMGEEFEMDSEINRRILATRRYISYGALRR 101

Query: 103 NNVPCSRRGASYYNCQPGAQANPYSRGCNAITR 119
           N +PCSRRGASYYNC+ GAQANPYSRGC+AITR
Sbjct: 102 NTIPCSRRGASYYNCRRGAQANPYSRGCSAITR 134

BLAST of CsaV3_2G006630 vs. Swiss-Prot
Match: sp|Q9MA62|RLF22_ARATH (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 2.7e-26
Identity = 57/74 (77.03%), Postives = 63/74 (85.14%), Query Frame = 0

Query: 46  STCKGSIAECFG-GEEFEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGA 105
           S C GSIAEC    EE EFDS+I+RRILA  +YISYGA+RRN+VPCSRRGASYYNCQ GA
Sbjct: 43  SGCTGSIAECIAEEEEMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGA 102

Query: 106 QANPYSRGCNAITR 119
           QANPYSRGC+ ITR
Sbjct: 103 QANPYSRGCSTITR 116

BLAST of CsaV3_2G006630 vs. TrEMBL
Match: tr|A0A0A0LFW9|A0A0A0LFW9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G031140 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 2.3e-62
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0

Query: 1   MAMAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEE 60
           MAMAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEE
Sbjct: 1   MAMAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEE 60

Query: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITR 119
           FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITR
Sbjct: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITR 118

BLAST of CsaV3_2G006630 vs. TrEMBL
Match: tr|A0A2C9VHY5|A0A2C9VHY5_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_08G118000 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.0e-38
Identity = 83/110 (75.45%), Postives = 93/110 (84.55%), Query Frame = 0

Query: 12  FLICAAVFLIFSC-SSTTVHAGLGIQHSLAWIPNQSTCKGSIAECF--GGEEFEFDSEIN 71
           F+ICAA+F++ S  +STTVH G   QH L WIP +S+CKGSIAEC    GEEFE DSEI+
Sbjct: 9   FMICAALFILISMNASTTVHGGGDHQHQLGWIPIRSSCKGSIAECLASNGEEFELDSEIS 68

Query: 72  RRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITR 119
           RRILATS YISYGAL+RN VPCSRRGASYYNCQPGAQANPYSRGC+AITR
Sbjct: 69  RRILATSSYISYGALQRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITR 118

BLAST of CsaV3_2G006630 vs. TrEMBL
Match: tr|A0A2I4GPT3|A0A2I4GPT3_9ROSI (protein RALF-like 33 OS=Juglans regia OX=51240 GN=LOC109009756 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 3.1e-35
Identity = 82/117 (70.09%), Postives = 92/117 (78.63%), Query Frame = 0

Query: 3   MAG-FNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEEF 62
           MAG F S   F ICA V L+FS SS+TVHAG    H L +IP  S+CKG++AEC   EEF
Sbjct: 1   MAGIFYSSAVFGICALV-LVFSSSSSTVHAGGLSHHQLGFIPAGSSCKGTVAECLAAEEF 60

Query: 63  EFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITR 119
           E  SEI+RRILATS YISYGAL+RN VPCSRRGASYYNCQ GAQANPYSRGC++ITR
Sbjct: 61  ELGSEISRRILATSGYISYGALQRNTVPCSRRGASYYNCQGGAQANPYSRGCSSITR 116

BLAST of CsaV3_2G006630 vs. TrEMBL
Match: tr|A5BUA5|A5BUA5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_037723 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.2e-34
Identity = 77/114 (67.54%), Postives = 90/114 (78.95%), Query Frame = 0

Query: 7   NSPTFFLICA--AVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEEFEFD 66
           NS  F LICA  AV ++ + SS    +G  +Q  L WIP +S C+GSIAEC  GEEFE D
Sbjct: 3   NSSAFVLICAIMAVHMVLT-SSAVDFSGDHLQFQLGWIPARSACQGSIAECLAGEEFEMD 62

Query: 67  SEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITR 119
           SEINRRILA+ +YISYGAL RN+VPCSRRGASYYNC+PGAQANPY+RGC+AITR
Sbjct: 63  SEINRRILASKRYISYGALSRNSVPCSRRGASYYNCRPGAQANPYTRGCSAITR 115

BLAST of CsaV3_2G006630 vs. TrEMBL
Match: tr|F6HDF3|F6HDF3_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0020g01490 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.2e-34
Identity = 77/114 (67.54%), Postives = 90/114 (78.95%), Query Frame = 0

Query: 7   NSPTFFLICA--AVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEEFEFD 66
           NS  F LICA  AV ++ + SS    +G  +Q  L WIP +S C+GSIAEC  GEEFE D
Sbjct: 3   NSSAFVLICAIMAVHMVLT-SSAVDFSGDHLQFQLGWIPARSACQGSIAECLAGEEFEMD 62

Query: 67  SEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITR 119
           SEINRRILA+ +YISYGAL RN+VPCSRRGASYYNC+PGAQANPY+RGC+AITR
Sbjct: 63  SEINRRILASKRYISYGALSRNSVPCSRRGASYYNCRPGAQANPYTRGCSAITR 115

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN60955.13.5e-62100.00hypothetical protein Csa_2G031140 [Cucumis sativus][more]
XP_022937540.14.4e-5791.53protein RALF-like 33 [Cucurbita moschata][more]
XP_022966015.11.7e-5690.68protein RALF-like 33 [Cucurbita maxima] >XP_023537429.1 protein RALF-like 33 [Cu... [more]
XP_022150733.11.7e-5387.29protein RALF-like 33 [Momordica charantia][more]
XP_022999036.11.1e-5287.93protein RALF-like 33 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT4G15800.16.6e-3169.07ralf-like 33[more]
AT1G02900.14.3e-3061.06rapid alkalinization factor 1[more]
AT3G16570.11.8e-2865.59rapid alkalinization factor 23[more]
AT3G05490.11.5e-2777.03ralf-like 22[more]
AT2G33775.12.1e-1655.56ralf-like 19[more]
Match NameE-valueIdentityDescription
sp|Q8L9P8|RLF33_ARATH1.2e-2969.07Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1[more]
sp|Q9SRY3|RLF1_ARATH7.7e-2961.06Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1[more]
sp|Q945T0|RALF_TOBAC2.5e-2757.89Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1[more]
sp|Q9LUS7|RLF23_ARATH3.2e-2765.59Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV... [more]
sp|Q9MA62|RLF22_ARATH2.7e-2677.03Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
tr|A0A0A0LFW9|A0A0A0LFW9_CUCSA2.3e-62100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G031140 PE=4 SV=1[more]
tr|A0A2C9VHY5|A0A2C9VHY5_MANES1.0e-3875.45Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_08G118000 PE=4 SV=... [more]
tr|A0A2I4GPT3|A0A2I4GPT3_9ROSI3.1e-3570.09protein RALF-like 33 OS=Juglans regia OX=51240 GN=LOC109009756 PE=4 SV=1[more]
tr|A5BUA5|A5BUA5_VITVI1.2e-3467.54Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_037723 PE=4 SV=1[more]
tr|F6HDF3|F6HDF3_VITVI1.2e-3467.54Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0020g01490 PE=4 SV=... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008801RALF
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0019722 calcium-mediated signaling
cellular_component GO:0005575 cellular_component
cellular_component GO:0005622 intracellular
cellular_component GO:0009506 plasmodesma
molecular_function GO:0003674 molecular_function
molecular_function GO:0004871 signal transducer activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G006630.1CsaV3_2G006630.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008801Rapid ALkalinization FactorPFAMPF05498RALFcoord: 59..118
e-value: 1.5E-28
score: 99.3
NoneNo IPR availablePANTHERPTHR33136FAMILY NOT NAMEDcoord: 10..118
NoneNo IPR availablePANTHERPTHR33136:SF4SUBFAMILY NOT NAMEDcoord: 10..118

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_2G006630CSPI02G04290Wild cucumber (PI 183967)cpicucB080
CsaV3_2G006630Cucsa.091080Cucumber (Gy14) v1cgycucB097
CsaV3_2G006630CmaCh17G003240Cucurbita maxima (Rimu)cmacucB0421
CsaV3_2G006630CmaCh05G011240Cucurbita maxima (Rimu)cmacucB0930
CsaV3_2G006630CmaCh08G012260Cucurbita maxima (Rimu)cmacucB1045
CsaV3_2G006630CmaCh12G010600Cucurbita maxima (Rimu)cmacucB0202
CsaV3_2G006630CmoCh12G010730Cucurbita moschata (Rifu)cmocucB0185
CsaV3_2G006630CmoCh05G011360Cucurbita moschata (Rifu)cmocucB0922
CsaV3_2G006630CmoCh08G012000Cucurbita moschata (Rifu)cmocucB1029
CsaV3_2G006630CmoCh17G003110Cucurbita moschata (Rifu)cmocucB0416
CsaV3_2G006630Cp4.1LG12g02690Cucurbita pepo (Zucchini)cpecucB0149
CsaV3_2G006630Cp4.1LG07g08990Cucurbita pepo (Zucchini)cpecucB1014
CsaV3_2G006630Cp4.1LG17g00620Cucurbita pepo (Zucchini)cpecucB0376
CsaV3_2G006630Cp4.1LG11g09060Cucurbita pepo (Zucchini)cpecucB0110
CsaV3_2G006630CsGy2G004400Cucumber (Gy14) v2cgybcucB064
CsaV3_2G006630Carg05502Silver-seed gourdcarcucB0077
CsaV3_2G006630Carg26765Silver-seed gourdcarcucB0778
CsaV3_2G006630Carg23292Silver-seed gourdcarcucB0920
CsaV3_2G006630Cla019924Watermelon (97103) v1cucwmB159
CsaV3_2G006630Cla009305Watermelon (97103) v1cucwmB190
CsaV3_2G006630MELO3C004224Melon (DHL92) v3.5.1cucmeB141
CsaV3_2G006630ClCG02G015440Watermelon (Charleston Gray)cucwcgB137
CsaV3_2G006630ClCG06G005140Watermelon (Charleston Gray)cucwcgB165
CsaV3_2G006630Lsi11G005880Bottle gourd (USVL1VR-Ls)cuclsiB108
CsaV3_2G006630MELO3C004224.2Melon (DHL92) v3.6.1cucmedB134
CsaV3_2G006630Cla97C02G041210Watermelon (97103) v2cucwmbB123
CsaV3_2G006630Cla97C06G114640Watermelon (97103) v2cucwmbB153
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_2G006630Cucumber (Chinese Long) v3cuccucB013
CsaV3_2G006630Cucurbita maxima (Rimu)cmacucB0934
CsaV3_2G006630Cucumber (Gy14) v2cgybcucB022
CsaV3_2G006630Cucurbita moschata (Rifu)cmocucB0924
CsaV3_2G006630Cucurbita pepo (Zucchini)cpecucB0115
CsaV3_2G006630Melon (DHL92) v3.5.1cucmeB119
CsaV3_2G006630Melon (DHL92) v3.6.1cucmedB113
CsaV3_2G006630Wax gourdcucwgoB136