MELO3C004224 (gene) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ACACTGTGAACTCCAAGAGCAAGAGACGAAGCACACCCCCACCGACGATTCGCCGGAGCAACACCGCCGGAGCTGAAGAAACTGTCAATTCCGAGTAGAAGACACTGAGAAACGAAGACAGAGAAAGTACGACCTTTTTTCTTGCATGGCAATGGCCGGATTCAATTCTCCGACCTTCTTCCTGATCTCCGCCGCCGTGTTTCTTATCTTCAGCTGTTCCTCAACCGCCGTCCACGCCGGTATTGGGATCCAAAACAGTCTTGCATGGATTCCTAATCAATCTACCTGTAAGGGCTCCATAGCGGAGTGTTTCGGGGGAGAGGAGTTTGAATTTGATTCAGAAATCAACCGCCGTATCTTGGCAACTAGCCAGTACATCAGCTACGGCGCTCTTCGGAGGAACAACGTGCCGTGCTCGAGACGTGGTGCGTCTTATTACAATTGTCAGCCCGGAGCTCAGGCCAATCCCTATAGCCGTGGATGCAACGCCATTACGAGGTGCAGGAGTTGAGTAATTTGTTTGTACTCTTTGTTTAATAATCTCTCTCTCCTTTTCAATGTTCATTGATCCTTCCCCCCCCCTCTTTATCTTTTCTTTGATATGGCTTTGATTGTTATACAAATTGAAAAAGGGGACATTGATCATATAGCGTCGTTCTTGTTGTTGTAAGTGTTGAAAATTGTTGTGTGTTAATTAATTATATATCTCTGCTCAATAATTTGGTAGTCCTTTAGTGGCTTGAATGTTCATCCTTCTTTCTTTTCCTTTTTCCATTGAAGGGAAAAAGATGAATCTGCAAAGAAAACGAGGAAGAAGAAAAATTGTAATTAGTTGAAATTAGGGAGAATC ACACTGTGAACTCCAAGAGCAAGAGACGAAGCACACCCCCACCGACGATTCGCCGGAGCAACACCGCCGGAGCTGAAGAAACTGTCAATTCCGAGTAGAAGACACTGAGAAACGAAGACAGAGAAAGTACGACCTTTTTTCTTGCATGGCAATGGCCGGATTCAATTCTCCGACCTTCTTCCTGATCTCCGCCGCCGTGTTTCTTATCTTCAGCTGTTCCTCAACCGCCGTCCACGCCGGTATTGGGATCCAAAACAGTCTTGCATGGATTCCTAATCAATCTACCTGTAAGGGCTCCATAGCGGAGTGTTTCGGGGGAGAGGAGTTTGAATTTGATTCAGAAATCAACCGCCGTATCTTGGCAACTAGCCAGTACATCAGCTACGGCGCTCTTCGGAGGAACAACGTGCCGTGCTCGAGACGTGGTGCGTCTTATTACAATTGTCAGCCCGGAGCTCAGGCCAATCCCTATAGCCGTGGATGCAACGCCATTACGAGGTGCAGGAGTTGAGTAATTTGTTTGTACTCTTTGTTTAATAATCTCTCTCTCCTTTTCAATGTTCATTGATCCTTCCCCCCCCCTCTTTATCTTTTCTTTGATATGGCTTTGATTGTTATACAAATTGAAAAAGGGGACATTGATCATATAGCGTCGTTCTTGTTGTTGTAAGTGTTGAAAATTGTTGTGTGTTAATTAATTATATATCTCTGCTCAATAATTTGGTAGTCCTTTAGTGGCTTGAATGTTCATCCTTCTTTCTTTTCCTTTTTCCATTGAAGGGAAAAAGATGAATCTGCAAAGAAAACGAGGAAGAAGAAAAATTGTAATTAGTTGAAATTAGGGAGAATC ATGGCAATGGCCGGATTCAATTCTCCGACCTTCTTCCTGATCTCCGCCGCCGTGTTTCTTATCTTCAGCTGTTCCTCAACCGCCGTCCACGCCGGTATTGGGATCCAAAACAGTCTTGCATGGATTCCTAATCAATCTACCTGTAAGGGCTCCATAGCGGAGTGTTTCGGGGGAGAGGAGTTTGAATTTGATTCAGAAATCAACCGCCGTATCTTGGCAACTAGCCAGTACATCAGCTACGGCGCTCTTCGGAGGAACAACGTGCCGTGCTCGAGACGTGGTGCGTCTTATTACAATTGTCAGCCCGGAGCTCAGGCCAATCCCTATAGCCGTGGATGCAACGCCATTACGAGGTGCAGGAGTTGA MAMAGFNSPTFFLISAAVFLIFSCSSTAVHAGIGIQNSLAWIPNQSTCKGSIAECFGGEEFEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCRS*
BLAST of MELO3C004224 vs. Swiss-Prot
Match: RLF1_ARATH (Protein RALF-like 1 OS=Arabidopsis thaliana GN=RALF1 PE=1 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 9.7e-32 Identity = 72/116 (62.07%), Postives = 81/116 (69.83%), Query Frame = 1
BLAST of MELO3C004224 vs. Swiss-Prot
Match: RLF33_ARATH (Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 4.8e-31 Identity = 66/93 (70.97%), Postives = 74/93 (79.57%), Query Frame = 1
BLAST of MELO3C004224 vs. Swiss-Prot
Match: RALF_TOBAC (Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 9.1e-30 Identity = 66/95 (69.47%), Postives = 73/95 (76.84%), Query Frame = 1
BLAST of MELO3C004224 vs. Swiss-Prot
Match: RLF23_ARATH (Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 1.3e-28 Identity = 63/95 (66.32%), Postives = 70/95 (73.68%), Query Frame = 1
BLAST of MELO3C004224 vs. Swiss-Prot
Match: RLF22_ARATH (Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 8.5e-28 Identity = 59/76 (77.63%), Postives = 63/76 (82.89%), Query Frame = 1
BLAST of MELO3C004224 vs. TrEMBL
Match: A0A0A0LFW9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G031140 PE=4 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 2.2e-62 Identity = 117/121 (96.69%), Postives = 119/121 (98.35%), Query Frame = 1
BLAST of MELO3C004224 vs. TrEMBL
Match: F6HDF3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01490 PE=4 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 1.0e-35 Identity = 77/115 (66.96%), Postives = 91/115 (79.13%), Query Frame = 1
BLAST of MELO3C004224 vs. TrEMBL
Match: A5BUA5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037723 PE=4 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 1.0e-35 Identity = 77/115 (66.96%), Postives = 91/115 (79.13%), Query Frame = 1
BLAST of MELO3C004224 vs. TrEMBL
Match: A0A061F478_THECC (Rapid alkalinization factor 1, putative OS=Theobroma cacao GN=TCM_026650 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 5.0e-35 Identity = 73/115 (63.48%), Postives = 85/115 (73.91%), Query Frame = 1
BLAST of MELO3C004224 vs. TrEMBL
Match: I1LBA3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G152000 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 6.6e-35 Identity = 82/120 (68.33%), Postives = 90/120 (75.00%), Query Frame = 1
BLAST of MELO3C004224 vs. TAIR10
Match: AT1G02900.1 (AT1G02900.1 rapid alkalinization factor 1) HSP 1 Score: 137.5 bits (345), Expect = 5.5e-33 Identity = 72/116 (62.07%), Postives = 81/116 (69.83%), Query Frame = 1
BLAST of MELO3C004224 vs. TAIR10
Match: AT4G15800.1 (AT4G15800.1 ralf-like 33) HSP 1 Score: 135.2 bits (339), Expect = 2.7e-32 Identity = 66/93 (70.97%), Postives = 74/93 (79.57%), Query Frame = 1
BLAST of MELO3C004224 vs. TAIR10
Match: AT3G16570.1 (AT3G16570.1 rapid alkalinization factor 23) HSP 1 Score: 127.1 bits (318), Expect = 7.4e-30 Identity = 63/95 (66.32%), Postives = 70/95 (73.68%), Query Frame = 1
BLAST of MELO3C004224 vs. TAIR10
Match: AT3G05490.1 (AT3G05490.1 ralf-like 22) HSP 1 Score: 124.4 bits (311), Expect = 4.8e-29 Identity = 59/76 (77.63%), Postives = 63/76 (82.89%), Query Frame = 1
BLAST of MELO3C004224 vs. TAIR10
Match: AT2G33775.1 (AT2G33775.1 ralf-like 19) HSP 1 Score: 85.1 bits (209), Expect = 3.2e-17 Identity = 44/83 (53.01%), Postives = 52/83 (62.65%), Query Frame = 1
BLAST of MELO3C004224 vs. NCBI nr
Match: gi|659070254|ref|XP_008454184.1| (PREDICTED: protein RALF-like 33 [Cucumis melo]) HSP 1 Score: 252.3 bits (643), Expect = 4.3e-64 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 1
BLAST of MELO3C004224 vs. NCBI nr
Match: gi|700205836|gb|KGN60955.1| (hypothetical protein Csa_2G031140 [Cucumis sativus]) HSP 1 Score: 246.1 bits (627), Expect = 3.1e-62 Identity = 117/121 (96.69%), Postives = 119/121 (98.35%), Query Frame = 1
BLAST of MELO3C004224 vs. NCBI nr
Match: gi|147862659|emb|CAN83593.1| (hypothetical protein VITISV_037723 [Vitis vinifera]) HSP 1 Score: 157.5 bits (397), Expect = 1.5e-35 Identity = 77/115 (66.96%), Postives = 91/115 (79.13%), Query Frame = 1
BLAST of MELO3C004224 vs. NCBI nr
Match: gi|297736875|emb|CBI26076.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 157.5 bits (397), Expect = 1.5e-35 Identity = 77/115 (66.96%), Postives = 91/115 (79.13%), Query Frame = 1
BLAST of MELO3C004224 vs. NCBI nr
Match: gi|225432308|ref|XP_002273386.1| (PREDICTED: protein RALF-like 33 [Vitis vinifera]) HSP 1 Score: 157.5 bits (397), Expect = 1.5e-35 Identity = 77/115 (66.96%), Postives = 91/115 (79.13%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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