CsaV3_1G036400 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G036400
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionRING-H2 finger protein
Locationchr1 : 22325744 .. 22326970 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTAAATGTTACGTTACCAAAAAACGGAGAGCCCATTTGGGTTCACGGAGAAAAAGATTCGTTGCATTCTCATAATAAATAAACTAAACACTCTCTCAACTCTTCTTCTACCTCCTTCCTCCGGCCACTGCCTACCGCGGCTCCTTCTCTGCAACTTTCTCAACCTTCCACCACCAACAATGACACCCACTAATTCCACTTCACTCACCCAATTCGCTCAAACCATTTTCTCCTACAACAGTAACATCATGCTCGCCGCTCTCATTTCTCTTCTCTTAGTCGTCCTCTTCGTCCTTCTCCTCCACGCTTACGCCAATTGCTTCTTCCCTCACCCTCGCCACCACCGCCGTACCTCTGTCACCGTCTCCTACGTCCTTGCTCCCCCTCGTCTCTCGCGTTTCGATTCCGTTCCCTTTGATTTAGGTTCCGCTCCGTCCAACTCCAAAGGCCTGGATCCGTCTGTTATCTCTGCCATTCCTCTGTTCGTCTACGAATCTGAGGAGAAGAAATGTGCGGCGGCGGCAGCGGCGATGGAGTGCGTGATTTGCCTCAGTGAATTCGAAGAACGAGAACTTGGACGACGGCTGCCCAAATGTAGGCATGGGTTTCATCTGGAGTGTATTGATATGTGGTTGAATTCTCACGCGAATTGTCCTGTTTGTAGAGAGCCGGTGATTGGCGAGGCTGTTGATTGTTCCGATGCGGTGGAATCAGGCGAGGGAGAAATCGGAAGGGAGACTGTGAATGAGGGGCAAAGCGTTCAATTTAACTCTGATTCCTCCTCCTCTTCTACTTCTTCGGTTGACCCACCGCCATTGATGTCGTCGATTGGAGCGTCATTGATTCGAATATTGAGTAGAAACAGATCAGACGGAAGGATTTTCCCGTCCTCCAATGGCGAAGAATTGGGTGTTTGAATTATGGAAGAAGCATCGCGCCATTTTTGTACAGATTTTCAAGAAATTAAAAATCCCTCTCCTTCCTTTAGTATTAGACTAGTCTCTCATAAAGTATAGTTTCATCCACAAGAAGCAAAATTAGTTTTCTTTTCTTTTCTTTTTAGCTAGGATTCATTTTTCTTCTCTCTTTTCTAAAGTAATTTATATTTTGCATGTTACCTTCATCTTACAAAGTATAAAATAAATTAGGATGGAAATTTTGATGAAAATTTTCAAGAAGTAGATTTAGTTAGTTCTAAACAAAAAAATTCATAATCAGATATCAAAG

mRNA sequence

ATGTTACGTTACCAAAAAACGGAGAGCCCATTTGGGTTCACGGAGAAAAAGATTCGTTGCATTCTCATAATAAATAAACTAAACACTCTCTCAACTCTTCTTCTACCTCCTTCCTCCGGCCACTGCCTACCGCGGCTCCTTCTCTGCAACTTTCTCAACCTTCCACCACCAACAATGACACCCACTAATTCCACTTCACTCACCCAATTCGCTCAAACCATTTTCTCCTACAACAGTAACATCATGCTCGCCGCTCTCATTTCTCTTCTCTTAGTCGTCCTCTTCGTCCTTCTCCTCCACGCTTACGCCAATTGCTTCTTCCCTCACCCTCGCCACCACCGCCGTACCTCTGTCACCGTCTCCTACGTCCTTGCTCCCCCTCGTCTCTCGCGTTTCGATTCCGTTCCCTTTGATTTAGGTTCCGCTCCGTCCAACTCCAAAGGCCTGGATCCGTCTGTTATCTCTGCCATTCCTCTGTTCGTCTACGAATCTGAGGAGAAGAAATGTGCGGCGGCGGCAGCGGCGATGGAGTGCGTGATTTGCCTCAGTGAATTCGAAGAACGAGAACTTGGACGACGGCTGCCCAAATGTAGGCATGGGTTTCATCTGGAGTGTATTGATATGTGGTTGAATTCTCACGCGAATTGTCCTGTTTGTAGAGAGCCGGTGATTGGCGAGGCTGTTGATTGTTCCGATGCGGTGGAATCAGGCGAGGGAGAAATCGGAAGGGAGACTGTGAATGAGGGGCAAAGCGTTCAATTTAACTCTGATTCCTCCTCCTCTTCTACTTCTTCGGTTGACCCACCGCCATTGATGTCGTCGATTGGAGCGTCATTGATTCGAATATTGAGTAGAAACAGATCAGACGGAAGGATTTTCCCGTCCTCCAATGGCGAAGAATTGGGTGTTTGA

Coding sequence (CDS)

ATGTTACGTTACCAAAAAACGGAGAGCCCATTTGGGTTCACGGAGAAAAAGATTCGTTGCATTCTCATAATAAATAAACTAAACACTCTCTCAACTCTTCTTCTACCTCCTTCCTCCGGCCACTGCCTACCGCGGCTCCTTCTCTGCAACTTTCTCAACCTTCCACCACCAACAATGACACCCACTAATTCCACTTCACTCACCCAATTCGCTCAAACCATTTTCTCCTACAACAGTAACATCATGCTCGCCGCTCTCATTTCTCTTCTCTTAGTCGTCCTCTTCGTCCTTCTCCTCCACGCTTACGCCAATTGCTTCTTCCCTCACCCTCGCCACCACCGCCGTACCTCTGTCACCGTCTCCTACGTCCTTGCTCCCCCTCGTCTCTCGCGTTTCGATTCCGTTCCCTTTGATTTAGGTTCCGCTCCGTCCAACTCCAAAGGCCTGGATCCGTCTGTTATCTCTGCCATTCCTCTGTTCGTCTACGAATCTGAGGAGAAGAAATGTGCGGCGGCGGCAGCGGCGATGGAGTGCGTGATTTGCCTCAGTGAATTCGAAGAACGAGAACTTGGACGACGGCTGCCCAAATGTAGGCATGGGTTTCATCTGGAGTGTATTGATATGTGGTTGAATTCTCACGCGAATTGTCCTGTTTGTAGAGAGCCGGTGATTGGCGAGGCTGTTGATTGTTCCGATGCGGTGGAATCAGGCGAGGGAGAAATCGGAAGGGAGACTGTGAATGAGGGGCAAAGCGTTCAATTTAACTCTGATTCCTCCTCCTCTTCTACTTCTTCGGTTGACCCACCGCCATTGATGTCGTCGATTGGAGCGTCATTGATTCGAATATTGAGTAGAAACAGATCAGACGGAAGGATTTTCCCGTCCTCCAATGGCGAAGAATTGGGTGTTTGA

Protein sequence

MLRYQKTESPFGFTEKKIRCILIINKLNTLSTLLLPPSSGHCLPRLLLCNFLNLPPPTMTPTNSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSVTVSYVLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESGEGEIGRETVNEGQSVQFNSDSSSSSTSSVDPPPLMSSIGASLIRILSRNRSDGRIFPSSNGEELGV
Homology
[Close]
BLAST of CsaV3_1G036400 vs. NCBI nr
Match: KGN65829.1 (hypothetical protein Csa_1G532370 [Cucumis sativus])

HSP 1 Score: 572.8 bits (1475), Expect = 7.0e-160
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0 

Query: 1   MLRYQKTESPFGFTEKKIRCILIINKLNTLSTLLLPPSSGHCLPRLLLCNFLNLPPPTMT 60
           MLRYQKTESPFGFTEKKIRCILIINKLNTLSTLLLPPSSGHCLPRLLLCNFLNLPPPTMT
Sbjct: 1   MLRYQKTESPFGFTEKKIRCILIINKLNTLSTLLLPPSSGHCLPRLLLCNFLNLPPPTMT 60

Query: 61  PTNSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSVTV 120
           PTNSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSVTV
Sbjct: 61  PTNSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSVTV 120

Query: 121 SYVLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVI 180
           SYVLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVI
Sbjct: 121 SYVLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVI 180

Query: 181 CLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESGEGE 240
           CLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESGEGE
Sbjct: 181 CLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESGEGE 240

Query: 241 IGRETVNEGQSVQFNSDXXXXXXXXXXXXXLMSSIGASLIRILSRNRSDGRIFPSSNGEE 300
           IGRETVNEGQSVQFNSDXXXXXXXXXXXXXLMSSIGASLIRILSRNRSDGRIFPSSNGEE
Sbjct: 241 IGRETVNEGQSVQFNSDXXXXXXXXXXXXXLMSSIGASLIRILSRNRSDGRIFPSSNGEE 300

Query: 301 LGV 304
           LGV
Sbjct: 301 LGV 303

[Close]
BLAST of CsaV3_1G036400 vs. NCBI nr
Match: XP_004145311.1 (PREDICTED: RING-H2 finger protein ATL63 [Cucumis sativus])

HSP 1 Score: 455.7 bits (1171), Expect = 1.3e-124
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0 

Query: 59  MTPTNSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSV 118
           MTPTNSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSV
Sbjct: 1   MTPTNSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSV 60

Query: 119 TVSYVLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMEC 178
           TVSYVLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMEC
Sbjct: 61  TVSYVLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMEC 120

Query: 179 VICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESGE 238
           VICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESGE
Sbjct: 121 VICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESGE 180

Query: 239 GEIGRETVNEGQSVQFNSDXXXXXXXXXXXXXLMSSIGASLIRILSRNRSDGRIFPSSNG 298
           GEIGRETVNEGQSVQFNSDXXXXXXXXXXXXXLMSSIGASLIRILSRNRSDGRIFPSSNG
Sbjct: 181 GEIGRETVNEGQSVQFNSDXXXXXXXXXXXXXLMSSIGASLIRILSRNRSDGRIFPSSNG 240

Query: 299 EELGV 304
           EELGV
Sbjct: 241 EELGV 245

[Close]
BLAST of CsaV3_1G036400 vs. NCBI nr
Match: XP_008457345.1 (PREDICTED: RING-H2 finger protein ATL63 isoform X1 [Cucumis melo] >XP_008457346.1 PREDICTED: RING-H2 finger protein ATL63 isoform X2 [Cucumis melo] >XP_008457348.1 PREDICTED: RING-H2 finger protein ATL63 isoform X3 [Cucumis melo])

HSP 1 Score: 410.6 bits (1054), Expect = 4.6e-111
Identity = 226/246 (91.87%), Postives = 228/246 (92.68%), Query Frame = 0 

Query: 59  MTPTNSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSV 118
           MT +NSTSLTQFAQ+IFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRH RRTSV
Sbjct: 1   MTSSNSTSLTQFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHRRRTSV 60

Query: 119 TVSYVLAPPRLSRFDS-VPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAME 178
           TVSYVLAPPRLSRFDS VPFDLGSAP  SKGLDPSVISAIPLFVYESEEKKC   AA ME
Sbjct: 61  TVSYVLAPPRLSRFDSVVPFDLGSAP--SKGLDPSVISAIPLFVYESEEKKC---AATME 120

Query: 179 CVICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESG 238
           CVICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDA ESG
Sbjct: 121 CVICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAAESG 180

Query: 239 EGEIGRETVNEGQSVQFNSDXXXXXXXXXXXXXLMSSIGASLIRILSRNRSDGRIFPSSN 298
           EGEIGRETVNEGQS QFNSD   XXXXXXX   LMSSIGASLIRILSRNRSDGRIFPSSN
Sbjct: 181 EGEIGRETVNEGQSGQFNSD--SXXXXXXXPPPLMSSIGASLIRILSRNRSDGRIFPSSN 239

Query: 299 GEELGV 304
           GEEL V
Sbjct: 241 GEELDV 239

[Close]
BLAST of CsaV3_1G036400 vs. NCBI nr
Match: XP_008457344.1 (PREDICTED: RING-H2 finger protein ATL63 isoform X4 [Cucumis melo])

HSP 1 Score: 400.6 bits (1028), Expect = 4.8e-108
Identity = 229/254 (90.16%), Postives = 231/254 (90.94%), Query Frame = 0 

Query: 59  MTPTNSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSV 118
           MT +NSTSLTQFAQ+IFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRH RRTSV
Sbjct: 1   MTSSNSTSLTQFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHRRRTSV 60

Query: 119 TVSYVLAPPRLSRFDS-VPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAME 178
           TVSYVLAPPRLSRFDS VPFDLGSAP  SKGLDPSVISAIPLFVYESEEKKC   AA ME
Sbjct: 61  TVSYVLAPPRLSRFDSVVPFDLGSAP--SKGLDPSVISAIPLFVYESEEKKC---AATME 120

Query: 179 CVICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESG 238
           CVICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDA ESG
Sbjct: 121 CVICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAAESG 180

Query: 239 EGEIGRETVNEGQSVQFNS--------DXXXXXXXXXXXXXLMSSIGASLIRILSRNRSD 298
           EGEIGRETVNEGQS QFNS         XXXXXXXXXXXXX  SSIGASLIRILSRNRSD
Sbjct: 181 EGEIGRETVNEGQSGQFNSXXXXXXXXXXXXXXXXXXXXXXXXSSIGASLIRILSRNRSD 240

Query: 299 GRIFPSSNGEELGV 304
           GRIFPSSNGEEL V
Sbjct: 241 GRIFPSSNGEELDV 249

[Close]
BLAST of CsaV3_1G036400 vs. NCBI nr
Match: XP_023519269.1 (RING-H2 finger protein ATL63-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 340.5 bits (872), Expect = 5.9e-90
Identity = 204/266 (76.69%), Postives = 217/266 (81.58%), Query Frame = 0 

Query: 63  NSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSVTVSY 122
           NSTSL  FAQ++FSYNSNIMLAALISLLLVVLFVLLLHAYANCFFP PR HRRTSVTVSY
Sbjct: 4   NSTSLIGFAQSVFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPR-HRRTSVTVSY 63

Query: 123 VLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVICL 182
           VL PPRLSRFDSVPFD G+AP  SKGLDPSVISAIPLFVYESEEKKC   AA MECVICL
Sbjct: 64  VLGPPRLSRFDSVPFDSGAAP--SKGLDPSVISAIPLFVYESEEKKC---AAVMECVICL 123

Query: 183 SEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVE----SGE 242
           SEFEERELGRRLPKC HGFHLECIDMWLNSHA+CPVCR PV+G+A DCSDAVE    SGE
Sbjct: 124 SEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDATDCSDAVESGRLSGE 183

Query: 243 GEIGRETV-----------NEGQSVQFNSDXXXXXXXXXXXXXL----------MSSIGA 302
            EIG E V           NEGQ+ QF+S XXXXXXXXXXXXX           + S+GA
Sbjct: 184 REIGGEIVTEERRNCEIQRNEGQNGQFHSXXXXXXXXXXXXXXXXXXXXXXXQPLMSLGA 243

Query: 303 SLIRILSRNRSDGRIFPSSNGEELGV 304
           SL R+LSRNRSDGRIFPSS+G+EL V
Sbjct: 244 SLKRMLSRNRSDGRIFPSSDGDELDV 263

[Close]
BLAST of CsaV3_1G036400 vs. TAIR10
Match: AT3G62690.1 (AtL5)

HSP 1 Score: 104.8 bits (260), Expect = 9.8e-23
Identity = 60/149 (40.27%), Postives = 85/149 (57.05%), Query Frame = 0 

Query: 75  FSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSVTVSYVLAPPRLSRFDS 134
           +S N  IMLA++I L + V+ +L  H+YA   F   R +RR    +S  L     +R   
Sbjct: 22  YSLNGKIMLASVIILFVAVILILCFHSYARWLF--RRQNRRIRRRISAHLRSLAAAR--- 81

Query: 135 VPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVICLSEFEERELGRRL 194
              D   + S+   LDP+V+  IP+FVY  +  +    +   EC +CLSEFEE + GR L
Sbjct: 82  ---DPTQSSSSLSPLDPTVLEKIPIFVYSVKTHE----SPLEECSVCLSEFEEDDEGRVL 141

Query: 195 PKCRHGFHLECIDMWLNSHANCPVCREPV 224
           PKC H FH++CID W  S ++CP+CR PV
Sbjct: 142 PKCGHVFHVDCIDTWFRSRSSCPLCRAPV 158

[Close]
BLAST of CsaV3_1G036400 vs. TAIR10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2)

HSP 1 Score: 99.0 bits (245), Expect = 5.4e-21
Identity = 43/92 (46.74%), Postives = 60/92 (65.22%), Query Frame = 0 

Query: 132 FDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVICLSEFEERELG 191
           F + P    ++   S+GLDP+VI ++P+F +  E  K       +EC +CLSEFEE E G
Sbjct: 78  FTADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHK-----DPIECAVCLSEFEESETG 137

Query: 192 RRLPKCRHGFHLECIDMWLNSHANCPVCREPV 224
           R LP C+H FH++CIDMW +SH+ CP+CR  V
Sbjct: 138 RVLPNCQHTFHVDCIDMWFHSHSTCPLCRSLV 164

[Close]
BLAST of CsaV3_1G036400 vs. TAIR10
Match: AT2G47560.1 (RING/U-box superfamily protein)

HSP 1 Score: 96.3 bits (238), Expect = 3.5e-20
Identity = 55/149 (36.91%), Postives = 74/149 (49.66%), Query Frame = 0 

Query: 75  FSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSVTVSYVLAPPRLSRFDS 134
           ++ N  IML+++I L + V+ +L  H+YA   F   R H R                   
Sbjct: 22  YALNGKIMLSSVIVLFVAVIMILCFHSYARWLF---RRHNRXXXXXXXXXXXTL------ 81

Query: 135 VPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVICLSEFEERELGRRL 194
                 SA    + LD +V+  IP+FVY S  K          C +CLSEFEE + GR L
Sbjct: 82  ------SASPRDQALDQAVLDKIPIFVYSS--KXXXXXXXXXXCSVCLSEFEEEDEGRLL 141

Query: 195 PKCRHGFHLECIDMWLNSHANCPVCREPV 224
           PKC H FH++CID W  S + CP+CR PV
Sbjct: 142 PKCGHSFHVDCIDTWFRSRSTCPLCRAPV 153

[Close]
BLAST of CsaV3_1G036400 vs. TAIR10
Match: AT4G15975.1 (RING/U-box superfamily protein)

HSP 1 Score: 94.4 bits (233), Expect = 1.3e-19
Identity = 45/116 (38.79%), Postives = 66/116 (56.90%), Query Frame = 0 

Query: 122 YVLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVIC 181
           Y+L     +R  +         S   GL+PS+I ++P+F + +       A  AMEC +C
Sbjct: 25  YLLRSSPFNRTTAASTFFTDPSSTPGGLNPSIIKSLPIFTFSA-----VTALFAMECSVC 84

Query: 182 LSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCR---EPVIGEAVDCSDAV 235
           LSEF++ E GR +P C+H FH++CIDMW +SH++CP+CR   EP  G      D V
Sbjct: 85  LSEFKDNESGRVMPNCKHTFHVDCIDMWFHSHSSCPLCRSLIEPFAGGVKSTMDEV 135

[Close]
BLAST of CsaV3_1G036400 vs. TAIR10
Match: AT5G58580.1 (TOXICOS EN LEVADURA 63)

HSP 1 Score: 93.6 bits (231), Expect = 2.3e-19
Identity = 46/97 (47.42%), Postives = 57/97 (58.76%), Query Frame = 0 

Query: 133 DSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVICLSEFEERELGR 192
           D V     +A  + KGLD SVIS+IPLFVY                VICL  +E  + GR
Sbjct: 96  DGVSSPAATATRDDKGLDSSVISSIPLFVY---XXXXXXXXXXXXXVICLGLWEAGDFGR 155

Query: 193 RLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVD 230
           +L  C HGFH+ECIDMWL+SH+ CP+CR PV+    D
Sbjct: 156 KLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSD 189

[Close]
BLAST of CsaV3_1G036400 vs. Swiss-Prot
Match: sp|Q9LZJ6|ATL5_ARATH (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.8e-21
Identity = 60/149 (40.27%), Postives = 85/149 (57.05%), Query Frame = 0 

Query: 75  FSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSVTVSYVLAPPRLSRFDS 134
           +S N  IMLA++I L + V+ +L  H+YA   F   R +RR    +S  L     +R   
Sbjct: 22  YSLNGKIMLASVIILFVAVILILCFHSYARWLF--RRQNRRIRRRISAHLRSLAAAR--- 81

Query: 135 VPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVICLSEFEERELGRRL 194
              D   + S+   LDP+V+  IP+FVY  +  +    +   EC +CLSEFEE + GR L
Sbjct: 82  ---DPTQSSSSLSPLDPTVLEKIPIFVYSVKTHE----SPLEECSVCLSEFEEDDEGRVL 141

Query: 195 PKCRHGFHLECIDMWLNSHANCPVCREPV 224
           PKC H FH++CID W  S ++CP+CR PV
Sbjct: 142 PKCGHVFHVDCIDTWFRSRSSCPLCRAPV 158

[Close]
BLAST of CsaV3_1G036400 vs. Swiss-Prot
Match: sp|Q8L9T5|ATL2_ARATH (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 99.0 bits (245), Expect = 9.7e-20
Identity = 43/92 (46.74%), Postives = 60/92 (65.22%), Query Frame = 0 

Query: 132 FDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVICLSEFEERELG 191
           F + P    ++   S+GLDP+VI ++P+F +  E  K       +EC +CLSEFEE E G
Sbjct: 78  FTADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHK-----DPIECAVCLSEFEESETG 137

Query: 192 RRLPKCRHGFHLECIDMWLNSHANCPVCREPV 224
           R LP C+H FH++CIDMW +SH+ CP+CR  V
Sbjct: 138 RVLPNCQHTFHVDCIDMWFHSHSTCPLCRSLV 164

[Close]
BLAST of CsaV3_1G036400 vs. Swiss-Prot
Match: sp|O22255|ATL64_ARATH (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 6.3e-19
Identity = 55/149 (36.91%), Postives = 74/149 (49.66%), Query Frame = 0 

Query: 75  FSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSVTVSYVLAPPRLSRFDS 134
           ++ N  IML+++I L + V+ +L  H+YA   F   R H R                   
Sbjct: 22  YALNGKIMLSSVIVLFVAVIMILCFHSYARWLF---RRHNRXXXXXXXXXXXTL------ 81

Query: 135 VPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVICLSEFEERELGRRL 194
                 SA    + LD +V+  IP+FVY S  K          C +CLSEFEE + GR L
Sbjct: 82  ------SASPRDQALDQAVLDKIPIFVYSS--KXXXXXXXXXXCSVCLSEFEEEDEGRLL 141

Query: 195 PKCRHGFHLECIDMWLNSHANCPVCREPV 224
           PKC H FH++CID W  S + CP+CR PV
Sbjct: 142 PKCGHSFHVDCIDTWFRSRSTCPLCRAPV 153

[Close]
BLAST of CsaV3_1G036400 vs. Swiss-Prot
Match: sp|Q8LF65|ATL17_ARATH (RING-H2 finger protein ATL17 OS=Arabidopsis thaliana OX=3702 GN=ATL17 PE=2 SV=2)

HSP 1 Score: 93.6 bits (231), Expect = 4.1e-18
Identity = 45/116 (38.79%), Postives = 65/116 (56.03%), Query Frame = 0 

Query: 122 YVLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVIC 181
           Y+L     +R  +         S   GL+PS+I ++P+F + +       A  AMEC +C
Sbjct: 25  YLLRSSPFNRTTAASTFFTDPSSTPGGLNPSIIKSLPIFTFSA-----VTALFAMECSVC 84

Query: 182 LSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCR---EPVIGEAVDCSDAV 235
           LSEF++ E GR +P C+H FH+ CIDMW +SH++CP+CR   EP  G      D V
Sbjct: 85  LSEFKDNESGRVMPNCKHTFHVHCIDMWFHSHSSCPLCRSQIEPFAGGVKSSMDEV 135

[Close]
BLAST of CsaV3_1G036400 vs. Swiss-Prot
Match: sp|Q9LUZ9|ATL63_ARATH (RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 4.1e-18
Identity = 46/97 (47.42%), Postives = 57/97 (58.76%), Query Frame = 0 

Query: 133 DSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVICLSEFEERELGR 192
           D V     +A  + KGLD SVIS+IPLFVY                VICL  +E  + GR
Sbjct: 96  DGVSSPAATATRDDKGLDSSVISSIPLFVY---XXXXXXXXXXXXXVICLGLWEAGDFGR 155

Query: 193 RLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVD 230
           +L  C HGFH+ECIDMWL+SH+ CP+CR PV+    D
Sbjct: 156 KLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSD 189

[Close]
BLAST of CsaV3_1G036400 vs. TrEMBL
Match: tr|A0A0A0LXP0|A0A0A0LXP0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532370 PE=4 SV=1)

HSP 1 Score: 572.8 bits (1475), Expect = 4.6e-160
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0 

Query: 1   MLRYQKTESPFGFTEKKIRCILIINKLNTLSTLLLPPSSGHCLPRLLLCNFLNLPPPTMT 60
           MLRYQKTESPFGFTEKKIRCILIINKLNTLSTLLLPPSSGHCLPRLLLCNFLNLPPPTMT
Sbjct: 1   MLRYQKTESPFGFTEKKIRCILIINKLNTLSTLLLPPSSGHCLPRLLLCNFLNLPPPTMT 60

Query: 61  PTNSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSVTV 120
           PTNSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSVTV
Sbjct: 61  PTNSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSVTV 120

Query: 121 SYVLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVI 180
           SYVLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVI
Sbjct: 121 SYVLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVI 180

Query: 181 CLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESGEGE 240
           CLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESGEGE
Sbjct: 181 CLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESGEGE 240

Query: 241 IGRETVNEGQSVQFNSDXXXXXXXXXXXXXLMSSIGASLIRILSRNRSDGRIFPSSNGEE 300
           IGRETVNEGQSVQFNSDXXXXXXXXXXXXXLMSSIGASLIRILSRNRSDGRIFPSSNGEE
Sbjct: 241 IGRETVNEGQSVQFNSDXXXXXXXXXXXXXLMSSIGASLIRILSRNRSDGRIFPSSNGEE 300

Query: 301 LGV 304
           LGV
Sbjct: 301 LGV 303

[Close]
BLAST of CsaV3_1G036400 vs. TrEMBL
Match: tr|A0A1S3C6K6|A0A1S3C6K6_CUCME (RING-H2 finger protein ATL63 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497058 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 3.1e-111
Identity = 226/246 (91.87%), Postives = 228/246 (92.68%), Query Frame = 0 

Query: 59  MTPTNSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSV 118
           MT +NSTSLTQFAQ+IFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRH RRTSV
Sbjct: 1   MTSSNSTSLTQFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHRRRTSV 60

Query: 119 TVSYVLAPPRLSRFDS-VPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAME 178
           TVSYVLAPPRLSRFDS VPFDLGSAP  SKGLDPSVISAIPLFVYESEEKKC   AA ME
Sbjct: 61  TVSYVLAPPRLSRFDSVVPFDLGSAP--SKGLDPSVISAIPLFVYESEEKKC---AATME 120

Query: 179 CVICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESG 238
           CVICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDA ESG
Sbjct: 121 CVICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAAESG 180

Query: 239 EGEIGRETVNEGQSVQFNSDXXXXXXXXXXXXXLMSSIGASLIRILSRNRSDGRIFPSSN 298
           EGEIGRETVNEGQS QFNSD   XXXXXXX   LMSSIGASLIRILSRNRSDGRIFPSSN
Sbjct: 181 EGEIGRETVNEGQSGQFNSD--SXXXXXXXPPPLMSSIGASLIRILSRNRSDGRIFPSSN 239

Query: 299 GEELGV 304
           GEEL V
Sbjct: 241 GEELDV 239

[Close]
BLAST of CsaV3_1G036400 vs. TrEMBL
Match: tr|A0A1S3C4V4|A0A1S3C4V4_CUCME (RING-H2 finger protein ATL63 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103497058 PE=4 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 3.2e-108
Identity = 229/254 (90.16%), Postives = 231/254 (90.94%), Query Frame = 0 

Query: 59  MTPTNSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSV 118
           MT +NSTSLTQFAQ+IFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRH RRTSV
Sbjct: 1   MTSSNSTSLTQFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHRRRTSV 60

Query: 119 TVSYVLAPPRLSRFDS-VPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAME 178
           TVSYVLAPPRLSRFDS VPFDLGSAP  SKGLDPSVISAIPLFVYESEEKKC   AA ME
Sbjct: 61  TVSYVLAPPRLSRFDSVVPFDLGSAP--SKGLDPSVISAIPLFVYESEEKKC---AATME 120

Query: 179 CVICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESG 238
           CVICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDA ESG
Sbjct: 121 CVICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAAESG 180

Query: 239 EGEIGRETVNEGQSVQFNS--------DXXXXXXXXXXXXXLMSSIGASLIRILSRNRSD 298
           EGEIGRETVNEGQS QFNS         XXXXXXXXXXXXX  SSIGASLIRILSRNRSD
Sbjct: 181 EGEIGRETVNEGQSGQFNSXXXXXXXXXXXXXXXXXXXXXXXXSSIGASLIRILSRNRSD 240

Query: 299 GRIFPSSNGEELGV 304
           GRIFPSSNGEEL V
Sbjct: 241 GRIFPSSNGEELDV 249

[Close]
BLAST of CsaV3_1G036400 vs. TrEMBL
Match: tr|A0A2R6P6C5|A0A2R6P6C5_ACTCH (RING-H2 finger protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc31825 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.0e-50
Identity = 124/251 (49.40%), Postives = 162/251 (64.54%), Query Frame = 0 

Query: 63  NSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSVTVSY 122
           +S S++    TIFSYN N++LAA++SLLLV+LFVLLLH YA  F    RH RR SV+VS+
Sbjct: 7   SSNSVSNLLHTIFSYNGNVLLAAIVSLLLVILFVLLLHVYAKWFLSQARHRRRRSVSVSH 66

Query: 123 VLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVICL 182
           VL P R   F+++ FD   + S +KGL+ S I++IPLF+YES   K       +ECVICL
Sbjct: 67  VLGPSRFHHFNTLSFDTAFSGSPTKGLEASAIASIPLFLYESHHHK-----NGLECVICL 126

Query: 183 SEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVI------GEAVD------C 242
           S FEE ELGR LPKC HGFH ECIDMW  SH++CP+CR P++      GE +D       
Sbjct: 127 SVFEEGELGRLLPKCGHGFHSECIDMWFRSHSSCPICRGPIVPAGESKGEEIDLVSNNVI 186

Query: 243 SDAV-ESGEGEIGRETVNEGQSVQFNSDXXXXXXXXXXXXXLMSSIGASLIRILSRNRSD 301
            D++ E    EI  E  N  ++V   SD      XXXXXX   +++G SL R+LSR+RS+
Sbjct: 187 VDSINEEPALEIVVEVPNSDENVVVTSDSLSACSXXXXXXSQAATLGGSLKRMLSRDRSE 246

[Close]
BLAST of CsaV3_1G036400 vs. TrEMBL
Match: tr|A0A2R6QJC0|A0A2R6QJC0_ACTCH (RING-H2 finger protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc16527 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 3.3e-49
Identity = 119/252 (47.22%), Postives = 160/252 (63.49%), Query Frame = 0 

Query: 63  NSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSVTVSY 122
           +S +++ F  TIFSYN NI+LAA++SLLLV+LFVLLLH Y   F    RH RR SV+VS+
Sbjct: 11  SSDAVSSFLHTIFSYNGNILLAAIVSLLLVILFVLLLHVYVKWFLSQARHRRRRSVSVSH 70

Query: 123 VLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVICL 182
           VL P R   F+++ FD   + S +KGL+ S I +IPLFVYES   K       +ECVICL
Sbjct: 71  VLGPARFHHFNTLAFDTAFSSSPTKGLEASAIDSIPLFVYESYHHK-----NGLECVICL 130

Query: 183 SEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESGEGEIG 242
           S FEE E+GR LPKC HGFH ECIDMWL SH++CP+CR PV+       + ++     + 
Sbjct: 131 SLFEEGEVGRLLPKCGHGFHSECIDMWLRSHSSCPICRGPVVPVGKSNGEEIDLVSNNVI 190

Query: 243 RETVNEGQSVQF--------------NSDXXXXXXXXXXXXXLMSSIGASLIRILSRNRS 301
            +++NE  +++                SD     XXXXXXX   +++G SL R+LSR+RS
Sbjct: 191 LDSINEEPALEIVVEVPNSDENEVVVISDSLSACXXXXXXXSQAATLGGSLKRMLSRDRS 250

The following BLAST results are available for this feature:
BLAST of CsaV3_1G036400 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN65829.17.0e-160100.00hypothetical protein Csa_1G532370 [Cucumis sativus][more]
XP_004145311.11.3e-124100.00PREDICTED: RING-H2 finger protein ATL63 [Cucumis sativus][more]
XP_008457345.14.6e-11191.87PREDICTED: RING-H2 finger protein ATL63 isoform X1 [Cucumis melo] >XP_008457346.... [more]
XP_008457344.14.8e-10890.16PREDICTED: RING-H2 finger protein ATL63 isoform X4 [Cucumis melo][more]
XP_023519269.15.9e-9076.69RING-H2 finger protein ATL63-like [Cucurbita pepo subsp. pepo][more]
BLAST of CsaV3_1G036400 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G62690.19.8e-2340.27AtL5[more]
AT3G16720.15.4e-2146.74TOXICOS EN LEVADURA 2[more]
AT2G47560.13.5e-2036.91RING/U-box superfamily protein[more]
AT4G15975.11.3e-1938.79RING/U-box superfamily protein[more]
AT5G58580.12.3e-1947.42TOXICOS EN LEVADURA 63[more]
BLAST of CsaV3_1G036400 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LZJ6|ATL5_ARATH1.8e-2140.27RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1[more]
sp|Q8L9T5|ATL2_ARATH9.7e-2046.74RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2[more]
sp|O22255|ATL64_ARATH6.3e-1936.91RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1[more]
sp|Q8LF65|ATL17_ARATH4.1e-1838.79RING-H2 finger protein ATL17 OS=Arabidopsis thaliana OX=3702 GN=ATL17 PE=2 SV=2[more]
sp|Q9LUZ9|ATL63_ARATH4.1e-1847.42RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1[more]
BLAST of CsaV3_1G036400 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LXP0|A0A0A0LXP0_CUCSA4.6e-160100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532370 PE=4 SV=1[more]
tr|A0A1S3C6K6|A0A1S3C6K6_CUCME3.1e-11191.87RING-H2 finger protein ATL63 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497058 ... [more]
tr|A0A1S3C4V4|A0A1S3C4V4_CUCME3.2e-10890.16RING-H2 finger protein ATL63 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103497058 ... [more]
tr|A0A2R6P6C5|A0A2R6P6C5_ACTCH1.0e-5049.40RING-H2 finger protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00... [more]
tr|A0A2R6QJC0|A0A2R6QJC0_ACTCH3.3e-4947.22RING-H2 finger protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009987 cellular process
biological_process GO:0008150 biological_process
biological_process GO:0050789 regulation of biological process
cellular_component GO:0005575 cellular_component
cellular_component GO:0044464 cell part
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0012505 endomembrane system
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G036400.1CsaV3_1G036400.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 178..219
e-value: 8.7E-7
score: 38.6
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 177..220
e-value: 8.8E-12
score: 45.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 178..220
score: 12.43
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 140..224
e-value: 5.7E-20
score: 72.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 251..271
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 80..270
NoneNo IPR availablePANTHERPTHR14155:SF417SUBFAMILY NOT NAMEDcoord: 80..270
NoneNo IPR availableCDDcd16461RING-H2_EL5_likecoord: 177..220
e-value: 1.09097E-16
score: 71.1871
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 177..224

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_1G036400CSPI01G24090Wild cucumber (PI 183967)cpicucB000
CsaV3_1G036400Cucsa.151710Cucumber (Gy14) v1cgycucB230
CsaV3_1G036400CmaCh13G000500Cucurbita maxima (Rimu)cmacucB0250
CsaV3_1G036400CmaCh01G006860Cucurbita maxima (Rimu)cmacucB0512
CsaV3_1G036400CmoCh13G000410Cucurbita moschata (Rifu)cmocucB0236
CsaV3_1G036400CmoCh01G007140Cucurbita moschata (Rifu)cmocucB0500
CsaV3_1G036400Cp4.1LG20g07950Cucurbita pepo (Zucchini)cpecucB0625
CsaV3_1G036400Cp4.1LG02g11910Cucurbita pepo (Zucchini)cpecucB0658
CsaV3_1G036400CsGy1G023570Cucumber (Gy14) v2cgybcucB001
CsaV3_1G036400Carg07055Silver-seed gourdcarcucB0556
CsaV3_1G036400Carg26032Silver-seed gourdcarcucB0649
CsaV3_1G036400Cla008146Watermelon (97103) v1cucwmB026
CsaV3_1G036400MELO3C020529Melon (DHL92) v3.5.1cucmeB025
CsaV3_1G036400ClCG03G000540Watermelon (Charleston Gray)cucwcgB051
CsaV3_1G036400Lsi02G012600Bottle gourd (USVL1VR-Ls)cuclsiB031
CsaV3_1G036400MELO3C020529.2Melon (DHL92) v3.6.1cucmedB023
CsaV3_1G036400Cla97C03G051320Watermelon (97103) v2cucwmbB042
CsaV3_1G036400Bhi08G000400Wax gourdcucwgoB050
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G036400Silver-seed gourdcarcucB0693
CsaV3_1G036400Cucurbita maxima (Rimu)cmacucB0821
CsaV3_1G036400Cucurbita maxima (Rimu)cmacucB0822
CsaV3_1G036400Cucurbita moschata (Rifu)cmocucB0804
CsaV3_1G036400Cucurbita moschata (Rifu)cmocucB0806
CsaV3_1G036400Cucurbita pepo (Zucchini)cpecucB0476
CsaV3_1G036400Watermelon (Charleston Gray)cucwcgB066
CsaV3_1G036400Watermelon (97103) v1cucwmB073