Carg07055 (gene) Silver-seed gourd

NameCarg07055
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionRING-H2 finger protein
LocationCucurbita_argyrosperma_scaffold_065 : 1175592 .. 1176335 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTTCAATTCCACTTCACTCTCTGATTTCACTCAGAGCATTTTCTCCTACAACAGCAACGTCATTCTCGCCGCTCTCATATCTCTTCTCCTCGTCGTCCTCTTTGTCCTTCTCCTCCATGCCTACGCCAATTGTTTCTTCCCTCGGCCTCGCCACCGCCATGCTCAGCGGAGTTCCGTCAATGTCTCCTACGTCCTTGGACCGCCTCGCCTCTCGCGTTTCGAATCGATTCCGTTCGATTTAGGCTTCGCTCAGTCGAAAGGCCTTGACTCGTCTGTAATCTCTGCGATTCCTCTGTTCGTTTATGAATCGGAGGAGAAGAAGTGTGCAACGGTGATGGAGTGCGTGATTTGCCTCAGTGAATTTGAGGAACGAGAAATCGGACGACGGTTGCCGATATGTAACCATGGATTTCACCTTGAATGTATCGATATGTGGTTGAATTCTCACGCGAATTGTCCTGTTTGTAGAGCGCCAGTAGTCGCAGAGGCGGTGGAATCTGGCCGGTTGAGCGGCGAGAGGGAAATCGGAGAAGAGATTGTAACGGAGGAGCGGACTAATTGTGAGATTCAGAGAAACGAGGAGCAAAACGGTCAGTTTCATTCTTCTTCTTCCTCTTCAAGTTCTTCGACTGATCCGCCATCGATGTCGCTTGGAGCATCTTTGAAGCGAATGTTGAGTAGAAACAGATCGAATGGAAGGATTTTCCCCTCTTCCAATGGCGATGAATTAAATGTTTGA

mRNA sequence

ATGGCGTTCAATTCCACTTCACTCTCTGATTTCACTCAGAGCATTTTCTCCTACAACAGCAACGTCATTCTCGCCGCTCTCATATCTCTTCTCCTCGTCGTCCTCTTTGTCCTTCTCCTCCATGCCTACGCCAATTGTTTCTTCCCTCGGCCTCGCCACCGCCATGCTCAGCGGAGTTCCGTCAATGTCTCCTACGTCCTTGGACCGCCTCGCCTCTCGCGTTTCGAATCGATTCCGTTCGATTTAGGCTTCGCTCAGTCGAAAGGCCTTGACTCGTCTGTAATCTCTGCGATTCCTCTGTTCGTTTATGAATCGGAGGAGAAGAAGTGTGCAACGGTGATGGAGTGCGTGATTTGCCTCAGTGAATTTGAGGAACGAGAAATCGGACGACGGTTGCCGATATGTAACCATGGATTTCACCTTGAATGTATCGATATGTGGTTGAATTCTCACGCGAATTGTCCTGTTTGTAGAGCGCCAGTAGTCGCAGAGGCGGTGGAATCTGGCCGGTTGAGCGGCGAGAGGGAAATCGGAGAAGAGATTGTAACGGAGGAGCGGACTAATTGTGAGATTCAGAGAAACGAGGAGCAAAACGGTCAGTTTCATTCTTCTTCTTCCTCTTCAAGTTCTTCGACTGATCCGCCATCGATGTCGCTTGGAGCATCTTTGAAGCGAATGTTGAGTAGAAACAGATCGAATGGAAGGATTTTCCCCTCTTCCAATGGCGATGAATTAAATGTTTGA

Coding sequence (CDS)

ATGGCGTTCAATTCCACTTCACTCTCTGATTTCACTCAGAGCATTTTCTCCTACAACAGCAACGTCATTCTCGCCGCTCTCATATCTCTTCTCCTCGTCGTCCTCTTTGTCCTTCTCCTCCATGCCTACGCCAATTGTTTCTTCCCTCGGCCTCGCCACCGCCATGCTCAGCGGAGTTCCGTCAATGTCTCCTACGTCCTTGGACCGCCTCGCCTCTCGCGTTTCGAATCGATTCCGTTCGATTTAGGCTTCGCTCAGTCGAAAGGCCTTGACTCGTCTGTAATCTCTGCGATTCCTCTGTTCGTTTATGAATCGGAGGAGAAGAAGTGTGCAACGGTGATGGAGTGCGTGATTTGCCTCAGTGAATTTGAGGAACGAGAAATCGGACGACGGTTGCCGATATGTAACCATGGATTTCACCTTGAATGTATCGATATGTGGTTGAATTCTCACGCGAATTGTCCTGTTTGTAGAGCGCCAGTAGTCGCAGAGGCGGTGGAATCTGGCCGGTTGAGCGGCGAGAGGGAAATCGGAGAAGAGATTGTAACGGAGGAGCGGACTAATTGTGAGATTCAGAGAAACGAGGAGCAAAACGGTCAGTTTCATTCTTCTTCTTCCTCTTCAAGTTCTTCGACTGATCCGCCATCGATGTCGCTTGGAGCATCTTTGAAGCGAATGTTGAGTAGAAACAGATCGAATGGAAGGATTTTCCCCTCTTCCAATGGCGATGAATTAAATGTTTGA

Protein sequence

MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVNVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICLSEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGRLSGEREIGEEIVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPSMSLGASLKRMLSRNRSNGRIFPSSNGDELNV
BLAST of Carg07055 vs. NCBI nr
Match: XP_022949238.1 (RING-H2 finger protein ATL63-like [Cucurbita moschata])

HSP 1 Score: 434.5 bits (1116), Expect = 2.4e-118
Identity = 245/247 (99.19%), Postives = 245/247 (99.19%), Query Frame = 0

Query: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60
           MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS
Sbjct: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60

Query: 61  VNVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120
           V VSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL
Sbjct: 61  VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120

Query: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGRLSGEREIGEE 180
           SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGRLSGEREIGEE
Sbjct: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGRLSGEREIGEE 180

Query: 181 IVTEERTNCEIQRNEXXXXXXXXXXXXXXXXXXXXXMSLGASLKRMLSRNRSNGRIFPSS 240
           IVTEERTNCEIQRNEXXXXXXXXXXXXXXXXXXXX MSLGASLKRMLSRNRSNGRIFPSS
Sbjct: 181 IVTEERTNCEIQRNEXXXXXXXXXXXXXXXXXXXXLMSLGASLKRMLSRNRSNGRIFPSS 240

Query: 241 NGDELNV 248
           NGDELNV
Sbjct: 241 NGDELNV 247

BLAST of Carg07055 vs. NCBI nr
Match: XP_023521602.1 (RING-H2 finger protein ATL63-like [Cucurbita pepo subsp. pepo] >XP_023521603.1 RING-H2 finger protein ATL63-like [Cucurbita pepo subsp. pepo] >XP_023523166.1 RING-H2 finger protein ATL63-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 429.5 bits (1103), Expect = 7.8e-117
Identity = 242/247 (97.98%), Postives = 242/247 (97.98%), Query Frame = 0

Query: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60
           MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS
Sbjct: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60

Query: 61  VNVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120
           V VSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL
Sbjct: 61  VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120

Query: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGRLSGEREIGEE 180
           SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESG LSGE EIGEE
Sbjct: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGGLSGESEIGEE 180

Query: 181 IVTEERTNCEIQRNEXXXXXXXXXXXXXXXXXXXXXMSLGASLKRMLSRNRSNGRIFPSS 240
           IVTEERTNCEIQRNE XXXXXXXXXXXXXXXXXXX MSLGASLKRMLSRNRSNGRIFPSS
Sbjct: 181 IVTEERTNCEIQRNEEXXXXXXXXXXXXXXXXXXXLMSLGASLKRMLSRNRSNGRIFPSS 240

Query: 241 NGDELNV 248
           NGDELNV
Sbjct: 241 NGDELNV 247

BLAST of Carg07055 vs. NCBI nr
Match: XP_022998608.1 (RING-H2 finger protein ATL63-like [Cucurbita maxima])

HSP 1 Score: 428.3 bits (1100), Expect = 1.7e-116
Identity = 240/247 (97.17%), Postives = 242/247 (97.98%), Query Frame = 0

Query: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60
           MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS
Sbjct: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60

Query: 61  VNVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120
           V VSYVLGPPRLSRF+SIPFDLGFAQSKGLDSSVIS IPLFVYESEEKKCATVMECVICL
Sbjct: 61  VTVSYVLGPPRLSRFDSIPFDLGFAQSKGLDSSVISTIPLFVYESEEKKCATVMECVICL 120

Query: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGRLSGEREIGEE 180
           SEFEEREIGRRLPICNHGFHL+CIDMWLNSHANCPVCRAPVVAEAVES RLSGEREIGEE
Sbjct: 121 SEFEEREIGRRLPICNHGFHLDCIDMWLNSHANCPVCRAPVVAEAVESSRLSGEREIGEE 180

Query: 181 IVTEERTNCEIQRNEXXXXXXXXXXXXXXXXXXXXXMSLGASLKRMLSRNRSNGRIFPSS 240
           IVTEERTNCEIQRNEXXXXXXXXXXXXXXXXXXX  MSLGASLKRMLSRNRSNGRIFPSS
Sbjct: 181 IVTEERTNCEIQRNEXXXXXXXXXXXXXXXXXXXPLMSLGASLKRMLSRNRSNGRIFPSS 240

Query: 241 NGDELNV 248
           NGDELNV
Sbjct: 241 NGDELNV 247

BLAST of Carg07055 vs. NCBI nr
Match: XP_022970592.1 (RING-H2 finger protein ATL63-like [Cucurbita maxima])

HSP 1 Score: 361.7 bits (927), Expect = 2.0e-96
Identity = 213/262 (81.30%), Postives = 229/262 (87.40%), Query Frame = 0

Query: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60
           MAFNSTSL  F QSIFSYNSN++LAALISLLLVVLFVLLLHAYANCFFP+PRHR   R+S
Sbjct: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHR---RTS 60

Query: 61  VNVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120
           V VSYVLGPPRLSRF+S+PFD G A SKGLD SVISAIPLFVYESEEKKC  VMECVICL
Sbjct: 61  VTVSYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCTAVMECVICL 120

Query: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVV------AEAVESGRLSGE 180
           SEFEERE+GRRLP C+HGFHLECIDMWLNSHA+CPVCRAPV+      ++AVESGRLSGE
Sbjct: 121 SEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGE 180

Query: 181 REIGEEIVTEERTNCEIQRNE---------XXXXXXXXXXXXXXXXXXXXXMSLGASLKR 240
           REIG EIVTEER+NCEIQRNE         XXXXXXXXXXXXXXXXXX   MSLGASLKR
Sbjct: 181 REIGGEIVTEERSNCEIQRNEGQNGQFYSXXXXXXXXXXXXXXXXXXXQPLMSLGASLKR 240

Query: 241 MLSRNRSNGRIFPSSNGDELNV 248
           MLSRNRS+GRIFPSS+GDEL+V
Sbjct: 241 MLSRNRSDGRIFPSSDGDELDV 259

BLAST of Carg07055 vs. NCBI nr
Match: XP_023519269.1 (RING-H2 finger protein ATL63-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 360.5 bits (924), Expect = 4.5e-96
Identity = 213/266 (80.08%), Postives = 229/266 (86.09%), Query Frame = 0

Query: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60
           MAFNSTSL  F QS+FSYNSN++LAALISLLLVVLFVLLLHAYANCFFP+PRHR   R+S
Sbjct: 1   MAFNSTSLIGFAQSVFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHR---RTS 60

Query: 61  VNVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120
           V VSYVLGPPRLSRF+S+PFD G A SKGLD SVISAIPLFVYESEEKKCA VMECVICL
Sbjct: 61  VTVSYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICL 120

Query: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVV------AEAVESGRLSGE 180
           SEFEERE+GRRLP C+HGFHLECIDMWLNSHA+CPVCRAPV+      ++AVESGRLSGE
Sbjct: 121 SEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDATDCSDAVESGRLSGE 180

Query: 181 REIGEEIVTEERTNCEIQRNE-------------XXXXXXXXXXXXXXXXXXXXXMSLGA 240
           REIG EIVTEER NCEIQRNE             XXXXXXXXXXXXXXXXXX   MSLGA
Sbjct: 181 REIGGEIVTEERRNCEIQRNEGQNGQFHSXXXXXXXXXXXXXXXXXXXXXXXQPLMSLGA 240

Query: 241 SLKRMLSRNRSNGRIFPSSNGDELNV 248
           SLKRMLSRNRS+GRIFPSS+GDEL+V
Sbjct: 241 SLKRMLSRNRSDGRIFPSSDGDELDV 263

BLAST of Carg07055 vs. TAIR10
Match: AT3G62690.1 (AtL5)

HSP 1 Score: 100.9 bits (250), Expect = 1.2e-21
Identity = 55/148 (37.16%), Postives = 84/148 (56.76%), Query Frame = 0

Query: 14  SIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVNVSYVLGPPRLS 73
           S +S N  ++LA++I L + V+ +L  H+YA   F R   R  +R S ++  +      +
Sbjct: 20  SRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRRIRRRISAHLRSLAAARDPT 79

Query: 74  RFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICLSEFEEREIGRRLP 133
           +  S            LD +V+  IP+FVY  +  + + + EC +CLSEFEE + GR LP
Sbjct: 80  QSSS--------SLSPLDPTVLEKIPIFVYSVKTHE-SPLEECSVCLSEFEEDDEGRVLP 139

Query: 134 ICNHGFHLECIDMWLNSHANCPVCRAPV 162
            C H FH++CID W  S ++CP+CRAPV
Sbjct: 140 KCGHVFHVDCIDTWFRSRSSCPLCRAPV 158

BLAST of Carg07055 vs. TAIR10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2)

HSP 1 Score: 99.0 bits (245), Expect = 4.4e-21
Identity = 46/92 (50.00%), Postives = 64/92 (69.57%), Query Frame = 0

Query: 87  SKGLDSSVISAIPLFVYESEEKKCATVMECVICLSEFEEREIGRRLPICNHGFHLECIDM 146
           S+GLD +VI ++P+F +  E  K    +EC +CLSEFEE E GR LP C H FH++CIDM
Sbjct: 92  SRGLDPNVIKSLPVFTFSDETHK--DPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDM 151

Query: 147 WLNSHANCPVCRAPVVAEA-VESGRLSGEREI 178
           W +SH+ CP+CR+ V + A +ES   + ERE+
Sbjct: 152 WFHSHSTCPLCRSLVESLAGIESTAAAREREV 181

BLAST of Carg07055 vs. TAIR10
Match: AT5G58580.1 (TOXICOS EN LEVADURA 63)

HSP 1 Score: 98.6 bits (244), Expect = 5.7e-21
Identity = 47/95 (49.47%), Postives = 58/95 (61.05%), Query Frame = 0

Query: 77  SIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICLSEFEEREIGRRLPICN 136
           S P        KGLDSSVIS+IPLFVY             VICL  +E  + GR+L  C 
Sbjct: 99  SSPAATATRDDKGLDSSVISSIPLFVYXXXXXXXXXXXXXVICLGLWEAGDFGRKLRNCG 158

Query: 137 HGFHLECIDMWLNSHANCPVCRAPVVAEAVESGRL 172
           HGFH+ECIDMWL+SH+ CP+CR+PV+A   +   L
Sbjct: 159 HGFHVECIDMWLSSHSTCPLCRSPVLAAVSDEENL 193

BLAST of Carg07055 vs. TAIR10
Match: AT2G47560.1 (RING/U-box superfamily protein)

HSP 1 Score: 96.7 bits (239), Expect = 2.2e-20
Identity = 55/164 (33.54%), Postives = 81/164 (49.39%), Query Frame = 0

Query: 12  TQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVNVSYVLGPPR 71
           T S ++ N  ++L+++I L + V+ +L  H+YA   F R               +   PR
Sbjct: 18  TSSGYALNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHNRXXXXXXXXXXXTLSASPR 77

Query: 72  LSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESE-EKKCATVMECVICLSEFEEREIGR 131
                           + LD +V+  IP+FVY S+          C +CLSEFEE + GR
Sbjct: 78  ---------------DQALDQAVLDKIPIFVYSSKXXXXXXXXXXCSVCLSEFEEEDEGR 137

Query: 132 RLPICNHGFHLECIDMWLNSHANCPVCRAPVVA--EAVESGRLS 173
            LP C H FH++CID W  S + CP+CRAPV    + +E+G  S
Sbjct: 138 LLPKCGHSFHVDCIDTWFRSRSTCPLCRAPVQPPFQVIETGSSS 166

BLAST of Carg07055 vs. TAIR10
Match: AT1G53820.1 (RING/U-box superfamily protein)

HSP 1 Score: 93.6 bits (231), Expect = 1.8e-19
Identity = 54/144 (37.50%), Postives = 82/144 (56.94%), Query Frame = 0

Query: 22  VILAALISLLLVVLFVLLLHAYANCFFPRPRHR---HAQRSSVNVSYVLG-PPRLSRFES 81
           V+L +++S+   +LF+LLLH YA  F+ R       +  +S    S V+G  PR  RF  
Sbjct: 24  VLLFSIVSIFTGILFLLLLHLYARLFWWRVEQHFNLNLIQSDDPGSTVIGRNPRRRRFVF 83

Query: 82  IPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICLSEFEEREIGRRLPICNH 141
                    + GLDS ++ +I + V++  + K    +EC +CLS+  + +  R LP CNH
Sbjct: 84  AQSQEDPLHNAGLDSKILQSIHVVVFKCTDFKDG--LECAVCLSDLVDGDKARVLPRCNH 143

Query: 142 GFHLECIDMWLNSHANCPVCRAPV 162
           GFH++CIDMW  SH+ CP+CR  V
Sbjct: 144 GFHVDCIDMWFQSHSTCPLCRNTV 165

BLAST of Carg07055 vs. Swiss-Prot
Match: sp|Q9LZJ6|ATL5_ARATH (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.1e-20
Identity = 55/148 (37.16%), Postives = 84/148 (56.76%), Query Frame = 0

Query: 14  SIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVNVSYVLGPPRLS 73
           S +S N  ++LA++I L + V+ +L  H+YA   F R   R  +R S ++  +      +
Sbjct: 20  SRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRRIRRRISAHLRSLAAARDPT 79

Query: 74  RFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICLSEFEEREIGRRLP 133
           +  S            LD +V+  IP+FVY  +  + + + EC +CLSEFEE + GR LP
Sbjct: 80  QSSS--------SLSPLDPTVLEKIPIFVYSVKTHE-SPLEECSVCLSEFEEDDEGRVLP 139

Query: 134 ICNHGFHLECIDMWLNSHANCPVCRAPV 162
            C H FH++CID W  S ++CP+CRAPV
Sbjct: 140 KCGHVFHVDCIDTWFRSRSSCPLCRAPV 158

BLAST of Carg07055 vs. Swiss-Prot
Match: sp|Q8L9T5|ATL2_ARATH (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 99.0 bits (245), Expect = 7.9e-20
Identity = 46/92 (50.00%), Postives = 64/92 (69.57%), Query Frame = 0

Query: 87  SKGLDSSVISAIPLFVYESEEKKCATVMECVICLSEFEEREIGRRLPICNHGFHLECIDM 146
           S+GLD +VI ++P+F +  E  K    +EC +CLSEFEE E GR LP C H FH++CIDM
Sbjct: 92  SRGLDPNVIKSLPVFTFSDETHK--DPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDM 151

Query: 147 WLNSHANCPVCRAPVVAEA-VESGRLSGEREI 178
           W +SH+ CP+CR+ V + A +ES   + ERE+
Sbjct: 152 WFHSHSTCPLCRSLVESLAGIESTAAAREREV 181

BLAST of Carg07055 vs. Swiss-Prot
Match: sp|Q9LUZ9|ATL63_ARATH (RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.0e-19
Identity = 47/95 (49.47%), Postives = 58/95 (61.05%), Query Frame = 0

Query: 77  SIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICLSEFEEREIGRRLPICN 136
           S P        KGLDSSVIS+IPLFVY             VICL  +E  + GR+L  C 
Sbjct: 99  SSPAATATRDDKGLDSSVISSIPLFVYXXXXXXXXXXXXXVICLGLWEAGDFGRKLRNCG 158

Query: 137 HGFHLECIDMWLNSHANCPVCRAPVVAEAVESGRL 172
           HGFH+ECIDMWL+SH+ CP+CR+PV+A   +   L
Sbjct: 159 HGFHVECIDMWLSSHSTCPLCRSPVLAAVSDEENL 193

BLAST of Carg07055 vs. Swiss-Prot
Match: sp|O22255|ATL64_ARATH (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.9e-19
Identity = 55/164 (33.54%), Postives = 81/164 (49.39%), Query Frame = 0

Query: 12  TQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVNVSYVLGPPR 71
           T S ++ N  ++L+++I L + V+ +L  H+YA   F R               +   PR
Sbjct: 18  TSSGYALNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHNRXXXXXXXXXXXTLSASPR 77

Query: 72  LSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESE-EKKCATVMECVICLSEFEEREIGR 131
                           + LD +V+  IP+FVY S+          C +CLSEFEE + GR
Sbjct: 78  ---------------DQALDQAVLDKIPIFVYSSKXXXXXXXXXXCSVCLSEFEEEDEGR 137

Query: 132 RLPICNHGFHLECIDMWLNSHANCPVCRAPVVA--EAVESGRLS 173
            LP C H FH++CID W  S + CP+CRAPV    + +E+G  S
Sbjct: 138 LLPKCGHSFHVDCIDTWFRSRSTCPLCRAPVQPPFQVIETGSSS 166

BLAST of Carg07055 vs. Swiss-Prot
Match: sp|P0C035|ATL60_ARATH (RING-H2 finger protein ATL60 OS=Arabidopsis thaliana OX=3702 GN=ATL60 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.3e-18
Identity = 54/144 (37.50%), Postives = 82/144 (56.94%), Query Frame = 0

Query: 22  VILAALISLLLVVLFVLLLHAYANCFFPRPRHR---HAQRSSVNVSYVLG-PPRLSRFES 81
           V+L +++S+   +LF+LLLH YA  F+ R       +  +S    S V+G  PR  RF  
Sbjct: 24  VLLFSIVSIFTGILFLLLLHLYARLFWWRVEQHFNLNLIQSDDPGSTVIGRNPRRRRFVF 83

Query: 82  IPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICLSEFEEREIGRRLPICNH 141
                    + GLDS ++ +I + V++  + K    +EC +CLS+  + +  R LP CNH
Sbjct: 84  AQSQEDPLHNAGLDSKILQSIHVVVFKCTDFKDG--LECAVCLSDLVDGDKARVLPRCNH 143

Query: 142 GFHLECIDMWLNSHANCPVCRAPV 162
           GFH++CIDMW  SH+ CP+CR  V
Sbjct: 144 GFHVDCIDMWFQSHSTCPLCRNTV 165

BLAST of Carg07055 vs. TrEMBL
Match: tr|A0A1S3C4V4|A0A1S3C4V4_CUCME (RING-H2 finger protein ATL63 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103497058 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 1.9e-82
Identity = 192/247 (77.73%), Postives = 209/247 (84.62%), Query Frame = 0

Query: 4   NSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVNV 63
           NSTSL+ F QSIFSYNSN++LAALISLLLVVLFVLLLHAYANCFFP PRHR  +R+SV V
Sbjct: 5   NSTSLTQFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHR--RRTSVTV 64

Query: 64  SYVLGPPRLSRFES-IPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICLSE 123
           SYVL PPRLSRF+S +PFDLG A SKGLD SVISAIPLFVYESEEKKCA  MECVICLSE
Sbjct: 65  SYVLAPPRLSRFDSVVPFDLGSAPSKGLDPSVISAIPLFVYESEEKKCAATMECVICLSE 124

Query: 124 FEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVE--SGRLSGEREIGEE 183
           FEERE+GRRLP C HGFHLECIDMWLNSHANCPVCR PV+ EAV+      SGE EIG E
Sbjct: 125 FEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAAESGEGEIGRE 184

Query: 184 IVTEERTNCEIQRNEXXXXXXXXXXXXXXXXXXXXXMSLGASLKRMLSRNRSNGRIFPSS 243
            V E ++        XXXXXXXXXXXXXXXXXXXXX S+GASL R+LSRNRS+GRIFPSS
Sbjct: 185 TVNEGQSGQFNSXXXXXXXXXXXXXXXXXXXXXXXXSSIGASLIRILSRNRSDGRIFPSS 244

Query: 244 NGDELNV 248
           NG+EL+V
Sbjct: 245 NGEELDV 249

BLAST of Carg07055 vs. TrEMBL
Match: tr|A0A1S3C6K6|A0A1S3C6K6_CUCME (RING-H2 finger protein ATL63 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497058 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 7.0e-82
Identity = 180/247 (72.87%), Postives = 197/247 (79.76%), Query Frame = 0

Query: 4   NSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVNV 63
           NSTSL+ F QSIFSYNSN++LAALISLLLVVLFVLLLHAYANCFFP PRHR  +R+SV V
Sbjct: 5   NSTSLTQFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHR--RRTSVTV 64

Query: 64  SYVLGPPRLSRFES-IPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICLSE 123
           SYVL PPRLSRF+S +PFDLG A SKGLD SVISAIPLFVYESEEKKCA  MECVICLSE
Sbjct: 65  SYVLAPPRLSRFDSVVPFDLGSAPSKGLDPSVISAIPLFVYESEEKKCAATMECVICLSE 124

Query: 124 FEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVE--SGRLSGEREIGEE 183
           FEERE+GRRLP C HGFHLECIDMWLNSHANCPVCR PV+ EAV+      SGE EIG E
Sbjct: 125 FEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAAESGEGEIGRE 184

Query: 184 IVTEERTNCEIQRNEXXXXXXXXXXXXXXXXXXXXXMSLGASLKRMLSRNRSNGRIFPSS 243
            V E ++    Q N          XXXXXXX      S+GASL R+LSRNRS+GRIFPSS
Sbjct: 185 TVNEGQSG---QFNS-------DSXXXXXXXPPPLMSSIGASLIRILSRNRSDGRIFPSS 239

Query: 244 NGDELNV 248
           NG+EL+V
Sbjct: 245 NGEELDV 239

BLAST of Carg07055 vs. TrEMBL
Match: tr|A0A0A0LXP0|A0A0A0LXP0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532370 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.5e-79
Identity = 184/251 (73.31%), Postives = 202/251 (80.48%), Query Frame = 0

Query: 4   NSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVNV 63
           NSTSL+ F Q+IFSYNSN++LAALISLLLVVLFVLLLHAYANCFFP PRH   +R+SV V
Sbjct: 63  NSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHH--RRTSVTV 122

Query: 64  SYVLGPPRLSRFESIPFDLGFA--QSKGLDSSVISAIPLFVYESEEKKC---ATVMECVI 123
           SYVL PPRLSRF+S+PFDLG A   SKGLD SVISAIPLFVYESEEKKC   A  MECVI
Sbjct: 123 SYVLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVI 182

Query: 124 CLSEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGRL--SGERE 183
           CLSEFEERE+GRRLP C HGFHLECIDMWLNSHANCPVCR PV+ EAV+      SGE E
Sbjct: 183 CLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESGEGE 242

Query: 184 IGEEIVTEERTNCEIQRNEXXXXXXXXXXXXXXXXXXXXXMSLGASLKRMLSRNRSNGRI 243
           IG E V E ++   +Q N       XXXXXXXXXXXXX   S+GASL R+LSRNRS+GRI
Sbjct: 243 IGRETVNEGQS---VQFNS-----DXXXXXXXXXXXXXLMSSIGASLIRILSRNRSDGRI 302

Query: 244 FPSSNGDELNV 248
           FPSSNG+EL V
Sbjct: 303 FPSSNGEELGV 303

BLAST of Carg07055 vs. TrEMBL
Match: tr|A0A2R6QJC0|A0A2R6QJC0_ACTCH (RING-H2 finger protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc16527 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.7e-49
Identity = 131/256 (51.17%), Postives = 160/256 (62.50%), Query Frame = 0

Query: 4   NSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVNV 63
           +S ++S F  +IFSYN N++LAA++SLLLV+LFVLLLH Y   F  + RHR  +R SV+V
Sbjct: 11  SSDAVSSFLHTIFSYNGNILLAAIVSLLLVILFVLLLHVYVKWFLSQARHR--RRRSVSV 70

Query: 64  SYVLGPPRLSRFESIPFDLGFAQS--KGLDSSVISAIPLFVYESEEKKCATVMECVICLS 123
           S+VLGP R   F ++ FD  F+ S  KGL++S I +IPLFVYES   K    +ECVICLS
Sbjct: 71  SHVLGPARFHHFNTLAFDTAFSSSPTKGLEASAIDSIPLFVYESYHHK--NGLECVICLS 130

Query: 124 EFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGRL---------- 183
            FEE E+GR LP C HGFH ECIDMWL SH++CP+CR PVV     +G            
Sbjct: 131 LFEEGEVGRLLPKCGHGFHSECIDMWLRSHSSCPICRGPVVPVGKSNGEEIDLVSNNVIL 190

Query: 184 -SGEREIGEEIVTEERTNCEIQRNEXXXXXXXXXXXXXXXXXXXXXMSLGASLKRMLSRN 243
            S   E   EIV E   + E   NE           XXXXXXX    +LG SLKRMLSR+
Sbjct: 191 DSINEEPALEIVVEVPNSDE---NEVVVISDSLSACXXXXXXXSQAATLGGSLKRMLSRD 250

Query: 244 RSNGRIFPSSNGDELN 247
           RS  +I PSSN DE N
Sbjct: 251 RSERKIHPSSNFDESN 259

BLAST of Carg07055 vs. TrEMBL
Match: tr|A0A2R6P6C5|A0A2R6P6C5_ACTCH (RING-H2 finger protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc31825 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 8.7e-48
Identity = 126/256 (49.22%), Postives = 156/256 (60.94%), Query Frame = 0

Query: 4   NSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVNV 63
           +S S+S+   +IFSYN NV+LAA++SLLLV+LFVLLLH YA  F  + RHR  +R SV+V
Sbjct: 7   SSNSVSNLLHTIFSYNGNVLLAAIVSLLLVILFVLLLHVYAKWFLSQARHR--RRRSVSV 66

Query: 64  SYVLGPPRLSRFESIPFDLGFAQS--KGLDSSVISAIPLFVYESEEKKCATVMECVICLS 123
           S+VLGP R   F ++ FD  F+ S  KGL++S I++IPLF+YES   K    +ECVICLS
Sbjct: 67  SHVLGPSRFHHFNTLSFDTAFSGSPTKGLEASAIASIPLFLYESHHHK--NGLECVICLS 126

Query: 124 EFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGRLSGER------ 183
            FEE E+GR LP C HGFH ECIDMW  SH++CP+CR P+    V +G   GE       
Sbjct: 127 VFEEGELGRLLPKCGHGFHSECIDMWFRSHSSCPICRGPI----VPAGESKGEEIDLVSN 186

Query: 184 -----EIGEEIVTEERTNCEIQRNEXXXXXXXXXXXXXXXXXXXXXMSLGASLKRMLSRN 243
                 I EE   E                       XXXXXX    +LG SLKRMLSR+
Sbjct: 187 NVIVDSINEEPALEIVVEVPNSDENVVVTSDSLSACSXXXXXXSQAATLGGSLKRMLSRD 246

Query: 244 RSNGRIFPSSNGDELN 247
           RS  +I PSSN DE N
Sbjct: 247 RSERKIHPSSNFDESN 254

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022949238.12.4e-11899.19RING-H2 finger protein ATL63-like [Cucurbita moschata][more]
XP_023521602.17.8e-11797.98RING-H2 finger protein ATL63-like [Cucurbita pepo subsp. pepo] >XP_023521603.1 R... [more]
XP_022998608.11.7e-11697.17RING-H2 finger protein ATL63-like [Cucurbita maxima][more]
XP_022970592.12.0e-9681.30RING-H2 finger protein ATL63-like [Cucurbita maxima][more]
XP_023519269.14.5e-9680.08RING-H2 finger protein ATL63-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT3G62690.11.2e-2137.16AtL5[more]
AT3G16720.14.4e-2150.00TOXICOS EN LEVADURA 2[more]
AT5G58580.15.7e-2149.47TOXICOS EN LEVADURA 63[more]
AT2G47560.12.2e-2033.54RING/U-box superfamily protein[more]
AT1G53820.11.8e-1937.50RING/U-box superfamily protein[more]
Match NameE-valueIdentityDescription
sp|Q9LZJ6|ATL5_ARATH2.1e-2037.16RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1[more]
sp|Q8L9T5|ATL2_ARATH7.9e-2050.00RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2[more]
sp|Q9LUZ9|ATL63_ARATH1.0e-1949.47RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1[more]
sp|O22255|ATL64_ARATH3.9e-1933.54RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1[more]
sp|P0C035|ATL60_ARATH3.3e-1837.50RING-H2 finger protein ATL60 OS=Arabidopsis thaliana OX=3702 GN=ATL60 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
tr|A0A1S3C4V4|A0A1S3C4V4_CUCME1.9e-8277.73RING-H2 finger protein ATL63 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103497058 ... [more]
tr|A0A1S3C6K6|A0A1S3C6K6_CUCME7.0e-8272.87RING-H2 finger protein ATL63 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497058 ... [more]
tr|A0A0A0LXP0|A0A0A0LXP0_CUCSA1.5e-7973.31Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532370 PE=4 SV=1[more]
tr|A0A2R6QJC0|A0A2R6QJC0_ACTCH2.7e-4951.17RING-H2 finger protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00... [more]
tr|A0A2R6P6C5|A0A2R6P6C5_ACTCH8.7e-4849.22RING-H2 finger protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg07055-RACarg07055-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 116..157
e-value: 1.2E-6
score: 38.1
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 115..158
e-value: 3.3E-12
score: 46.4
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 116..158
score: 12.297
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 81..163
e-value: 8.9E-22
score: 78.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..224
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..224
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 28..212
NoneNo IPR availablePANTHERPTHR14155:SF292E3 UBIQUITIN-PROTEIN LIGASE RING1-RELATEDcoord: 28..212
NoneNo IPR availableCDDcd16461RING-H2_EL5_likecoord: 115..158
e-value: 2.43808E-17
score: 72.3427
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 100..162