ClCG03G000540 (gene) Watermelon (Charleston Gray)

Overview
NameClCG03G000540
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionRing finger protein, putative
LocationCG_Chr03 : 551415 .. 552158 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTCCAATTCCACTTCACTCATTGATTTCGCTCAGAGCATTTTCTCCTACAACAGCAACATCATGCTCGCCGCTCTCATTTCTCTTCTCTTAGTCGTCCTCTTCGTCCTTCTCCTCCACGCCTACGCCAATTGCTTCTTCCCTCACCCTCGCCACCGCCGCCGCACCTCCGTCACTGTCTCTTACGTCTTCGCTCCACCTCGTCGCTCTCGATTCGATTCGGTTCACTTTGATTTAAGTTCCGCTCCTTCGAAAGGCCTCGACCCGTCTGTAATCTCTGCGATTCCTCTGTTCGTTTACGAATCCGAGGAGAAGAAATGTGCGGCGGCGATGGAGTGCGTGATTTGCCTCAGCGAATTTGAAGAACGAGAGCTTGGACGACGCTTGCCGAAATGTAGCCATGGATTTCATCTGGAGTGTATCGATATGTGGCTGAATTCACACGCGAATTGTCCTGTTTGTAGACAGCCGGTGATTGGCGAGGTTGTGGATTGTTCCGATGCGGCAGAGTCCGGCGAGAGAGAAATCGGACGGGAGATTGTGATGGAGGAAGGGCAGAGGAATGAGGGGCAAAATGGTCAGTTTAGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTTTGATCCGCCATTGATGTCCCTTGGAGCGTCTTTGATGCGAATGTTGAGCAGAAACAGATCAGACGGAAGGATTTTCCCCTCCTCCAATGGCGACGAATTGGATGTTTGA

mRNA sequence

ATGGCCTCCAATTCCACTTCACTCATTGATTTCGCTCAGAGCATTTTCTCCTACAACAGCAACATCATGCTCGCCGCTCTCATTTCTCTTCTCTTAGTCGTCCTCTTCGTCCTTCTCCTCCACGCCTACGCCAATTGCTTCTTCCCTCACCCTCGCCACCGCCGCCGCACCTCCGTCACTGTCTCTTACGTCTTCGCTCCACCTCGTCGCTCTCGATTCGATTCGGTTCACTTTGATTTAAGTTCCGCTCCTTCGAAAGGCCTCGACCCGTCTGTAATCTCTGCGATTCCTCTGTTCGTTTACGAATCCGAGGAGAAGAAATGTGCGGCGGCGATGGAGTGCGTGATTTGCCTCAGCGAATTTGAAGAACGAGAGCTTGGACGACGCTTGCCGAAATGTAGCCATGGATTTCATCTGGAGTGTATCGATATGTGGCTGAATTCACACGCGAATTGTCCTGTTTGTAGACAGCCGGTGATTGGCGAGGTTGTGGATTGTTCCGATGCGGCAGAGTCCGGCGAGAGAGAAATCGGACGGGAGATTGTGATGGAGGAAGGGCAGAGGAATGAGGGGCAAAATGGTCAGTTTAGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTTTGATCCGCCATTGATGTCCCTTGGAGCGTCTTTGATGCGAATGTTGAGCAGAAACAGATCAGACGGAAGGATTTTCCCCTCCTCCAATGGCGACGAATTGGATGTTTGA

Coding sequence (CDS)

ATGGCCTCCAATTCCACTTCACTCATTGATTTCGCTCAGAGCATTTTCTCCTACAACAGCAACATCATGCTCGCCGCTCTCATTTCTCTTCTCTTAGTCGTCCTCTTCGTCCTTCTCCTCCACGCCTACGCCAATTGCTTCTTCCCTCACCCTCGCCACCGCCGCCGCACCTCCGTCACTGTCTCTTACGTCTTCGCTCCACCTCGTCGCTCTCGATTCGATTCGGTTCACTTTGATTTAAGTTCCGCTCCTTCGAAAGGCCTCGACCCGTCTGTAATCTCTGCGATTCCTCTGTTCGTTTACGAATCCGAGGAGAAGAAATGTGCGGCGGCGATGGAGTGCGTGATTTGCCTCAGCGAATTTGAAGAACGAGAGCTTGGACGACGCTTGCCGAAATGTAGCCATGGATTTCATCTGGAGTGTATCGATATGTGGCTGAATTCACACGCGAATTGTCCTGTTTGTAGACAGCCGGTGATTGGCGAGGTTGTGGATTGTTCCGATGCGGCAGAGTCCGGCGAGAGAGAAATCGGACGGGAGATTGTGATGGAGGAAGGGCAGAGGAATGAGGGGCAAAATGGTCAGTTTAGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTTTGATCCGCCATTGATGTCCCTTGGAGCGTCTTTGATGCGAATGTTGAGCAGAAACAGATCAGACGGAAGGATTTTCCCCTCCTCCAATGGCGACGAATTGGATGTTTGA

Protein sequence

MASNSTSLIDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHRRRTSVTVSYVFAPPRRSRFDSVHFDLSSAPSKGLDPSVISAIPLFVYESEEKKCAAAMECVICLSEFEERELGRRLPKCSHGFHLECIDMWLNSHANCPVCRQPVIGEVVDCSDAAESGEREIGREIVMEEGQRNEGQNGQFSSSSSSSSSSSSSSSFDPPLMSLGASLMRMLSRNRSDGRIFPSSNGDELDV
Homology
[Close]
BLAST of ClCG03G000540 vs. Swiss-Prot
Match: ATL63_ARATH (RING-H2 finger protein ATL63 OS=Arabidopsis thaliana GN=ATL63 PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.2e-36
Identity = 92/208 (44.23%), Postives = 116/208 (55.77%), Query Frame = 1 

Query: 3   SNSTSLIDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFP------------- 62
           S  +SL  F + + SYNSN++LAAL+ LLLVVLFVLLLH YA  F+              
Sbjct: 10  SVKSSLSSFLKILSSYNSNVLLAALVFLLLVVLFVLLLHFYARFFWSPSHQDFSAAARHR 69

Query: 63  --HPRHRRRTSVTVSYVFAPPRRSRFDSVHFDLSSAP--SKGLDPSVISAIPLFVYESEE 122
               R+RRRT  T   + + P     D V    ++A    KGLD SVIS+IPLFVYE  E
Sbjct: 70  RRRRRNRRRTVTTTRIIPSLPLGGFDDGVSSPAATATRDDKGLDSSVISSIPLFVYEENE 129

Query: 123 KKCAAAMECVICLSEFEERELGRRLPKCSHGFHLECIDMWLNSHANCPVCRQPVIGEVVD 182
           ++     ECVICL  +E  + GR+L  C HGFH+ECIDMWL+SH+ CP+CR PV+  V D
Sbjct: 130 EEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSD 189

Query: 183 CSD---AAESGEREIGREIVMEEGQRNE 191
             +   A  + E E    + M     NE
Sbjct: 190 EENLKLAVNAVEEEAEVRLQMSPAGENE 217

[Close]
BLAST of ClCG03G000540 vs. Swiss-Prot
Match: ATL2_ARATH (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 3.3e-26
Identity = 64/168 (38.10%), Postives = 93/168 (55.36%), Query Frame = 1 

Query: 16  FSYNSNIMLAALISLLLVVLFVLLLHAYANCFF--PHPRHRRRTS----VTVSYVFAPPR 75
           ++ +  IML+A++ L  VV+ ++ LH YA  +      RH RR S     T+ +  A P 
Sbjct: 24  YAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPS 83

Query: 76  RSRFDSVHFDLSSAPSKGLDPSVISAIPLFVYESEEKKCAAAMECVICLSEFEERELGRR 135
            +         S   S+GLDP+VI ++P+F +  E  K    +EC +CLSEFEE E GR 
Sbjct: 84  TAA-------TSVVASRGLDPNVIKSLPVFTFSDETHK--DPIECAVCLSEFEESETGRV 143

Query: 136 LPKCSHGFHLECIDMWLNSHANCPVCRQPVIGEVVDCSDAAESGEREI 178
           LP C H FH++CIDMW +SH+ CP+CR  ++  +      A + ERE+
Sbjct: 144 LPNCQHTFHVDCIDMWFHSHSTCPLCRS-LVESLAGIESTAAAREREV 181

[Close]
BLAST of ClCG03G000540 vs. Swiss-Prot
Match: ATL5_ARATH (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 9.5e-26
Identity = 74/206 (35.92%), Postives = 102/206 (49.51%), Query Frame = 1 

Query: 9   IDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHRRRTSVTVSYVFAPP 68
           ++   S +S N  IMLA++I L + V+ +L  H+YA   F     R R  ++        
Sbjct: 15  MNHGSSRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRRIRRRISAHL----- 74

Query: 69  RRSRFDSVHFDLSSAPSKGLDPSVISAIPLFVYESEEKKCAAAMECVICLSEFEERELGR 128
            RS   +     SS+    LDP+V+  IP+FVY  +  + +   EC +CLSEFEE + GR
Sbjct: 75  -RSLAAARDPTQSSSSLSPLDPTVLEKIPIFVYSVKTHE-SPLEECSVCLSEFEEDDEGR 134

Query: 129 RLPKCSHGFHLECIDMWLNSHANCPVCRQPVIGEVVDCSDAAESGEREIGREIVMEEGQR 188
            LPKC H FH++CID W  S ++CP+CR PV         A    E E    +       
Sbjct: 135 VLPKCGHVFHVDCIDTWFRSRSSCPLCRAPV-------QPAQPVTEPEPVAAVFPSVKPI 194

Query: 189 NEGQNGQFSSSSSSSSSSSSSSSFDP 215
            + + G  SSS  S SS+ SSSS  P
Sbjct: 195 EDTEAGSSSSSDESESSTPSSSSGSP 206

[Close]
BLAST of ClCG03G000540 vs. Swiss-Prot
Match: ATL64_ARATH (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.9e-24
Identity = 64/158 (40.51%), Postives = 85/158 (53.80%), Query Frame = 1 

Query: 9   IDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHRRRTSVTVSYVFAPP 68
           +    S ++ N  IML+++I L + V+ +L  H+YA   F   RH RR            
Sbjct: 15  VSHTSSGYALNGKIMLSSVIVLFVAVIMILCFHSYARWLFR--RHNRRI----------- 74

Query: 69  RRSRFDSVHFDLSSAP-SKGLDPSVISAIPLFVYES------EEKKCAAAMECVICLSEF 128
            R R  S    LS++P  + LD +V+  IP+FVY S      EEK+     EC +CLSEF
Sbjct: 75  -RRRIRSHLRTLSASPRDQALDQAVLDKIPIFVYSSKNPPPPEEKE-----ECSVCLSEF 134

Query: 129 EERELGRRLPKCSHGFHLECIDMWLNSHANCPVCRQPV 160
           EE + GR LPKC H FH++CID W  S + CP+CR PV
Sbjct: 135 EEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPV 153

[Close]
BLAST of ClCG03G000540 vs. Swiss-Prot
Match: ATL41_ARATH (E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana GN=ATL41 PE=1 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.9e-22
Identity = 76/226 (33.63%), Postives = 112/226 (49.56%), Query Frame = 1 

Query: 14  SIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHRRRTSVTVSYVFAPPRRSRF 73
           S +  NS IMLAA+ SL  V+L V  LH YA       R RR     +  +F  P     
Sbjct: 23  STYDLNSKIMLAAVASLSGVILIVFALHLYARFVL---RRRREAFRGLPVIFRHP----- 82

Query: 74  DSVHFDLSSAPSKGLDPSVISAIPLFVYESEEKKCAAAMECVICLSEFEERELGRRLPKC 133
               F++   P +GL+P+VI+++P F   + +   A+A EC +CLS  +E++  R LP C
Sbjct: 83  ----FEM---PKRGLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNC 142

Query: 134 SHGFHLECIDMWLNSHANCPVCRQPVIGEVVDCSDAAESGERE--IG-REIVMEEGQRNE 193
            H FH++C+D WL + + CPVCR       V+     E   RE  +G    ++ E + N 
Sbjct: 143 KHIFHVDCVDTWLTTCSTCPVCRTE-----VEPRPRLEPEPREGPVGTAPQLLVETRLN- 202

Query: 194 GQNGQFSSSSSSSSSSSSSSSFDPPLMSLGASLMRMLSRNRSDGRI 237
                  +  ++SSSSS + +   P   L  S  ++L+R RS  RI
Sbjct: 203 ------LTVEAASSSSSDNKTVVSPASRLN-SFRKILTRERSSNRI 220

[Close]
BLAST of ClCG03G000540 vs. TrEMBL
Match: A0A0A0LXP0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G532370 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 4.9e-106
Identity = 208/251 (82.87%), Postives = 218/251 (86.85%), Query Frame = 1 

Query: 3   SNSTSLIDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHRRRTSVTVS 62
           +NSTSL  FAQ+IFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRH RRTSVTVS
Sbjct: 62  TNSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSVTVS 121

Query: 63  YVFAPPRRSRFDSVHFDLSSAPS--KGLDPSVISAIPLFVYESEEKKCAAA---MECVIC 122
           YV APPR SRFDSV FDL SAPS  KGLDPSVISAIPLFVYESEEKKCAAA   MECVIC
Sbjct: 122 YVLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVIC 181

Query: 123 LSEFEERELGRRLPKCSHGFHLECIDMWLNSHANCPVCRQPVIGEVVDCSDAAESGEREI 182
           LSEFEERELGRRLPKC HGFHLECIDMWLNSHANCPVCR+PVIGE VDCSDA ESGE EI
Sbjct: 182 LSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESGEGEI 241

Query: 183 GREIVMEEGQRNEGQNGQFSSSSSSSSSSSSSSSFDPPLM-SLGASLMRMLSRNRSDGRI 242
           GRE V      NEGQ+ QF+S SSSSS+SS      PPLM S+GASL+R+LSRNRSDGRI
Sbjct: 242 GRETV------NEGQSVQFNSDSSSSSTSSVD---PPPLMSSIGASLIRILSRNRSDGRI 301

Query: 243 FPSSNGDELDV 248
           FPSSNG+EL V
Sbjct: 302 FPSSNGEELGV 303

[Close]
BLAST of ClCG03G000540 vs. TrEMBL
Match: D7SJU6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g06930 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 6.1e-56
Identity = 129/261 (49.43%), Postives = 168/261 (64.37%), Query Frame = 1 

Query: 2   ASNSTSLIDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHRRRTSVTV 61
           +S S+   DF +S+FSYN N+MLAA++SLLLV+LFVL+LH YA  F  H RHRRR+SV+V
Sbjct: 8   SSISSPFTDFMKSVFSYNGNVMLAAIVSLLLVILFVLVLHIYAKWFLAHARHRRRSSVSV 67

Query: 62  SYVFAPPRRSRFDSVHFD--LSSAPSKGLDPSVISAIPLFVYESEEKKCAAAMECVICLS 121
           S+V  P R   F +  F+  LS +P+KGLD S IS+IPLFVY++EE K    +ECVICLS
Sbjct: 68  SHVLRPTRFHHFHTFTFETTLSGSPTKGLDSSAISSIPLFVYKAEEHK--HGLECVICLS 127

Query: 122 EFEERELGRRLPKCSHGFHLECIDMWLNSHANCPVCRQPVIGE--VVDCSDAA--ESGER 181
            FE+ ++GR LPKC H FH++CIDMWL+SH+NCP+CR P   E   V   D A  + G  
Sbjct: 128 VFEDDDVGRNLPKCGHAFHVQCIDMWLHSHSNCPICRAPAACEKKAVSQPDEAILQEGSI 187

Query: 182 EIGREIVMEEGQRNE------------GQNG----QFSSSSSSSSSSSSSSSFDPPLMSL 241
           E+    + + G  +E             +NG        S S+SSS SS SS      SL
Sbjct: 188 ELSEAFIGDLGLIDEDSPMELVVEIPDSENGNAVTDIHDSLSASSSLSSQSS------SL 247

[Close]
BLAST of ClCG03G000540 vs. TrEMBL
Match: A0A0D2QKV6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G147000 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 4.9e-53
Identity = 115/250 (46.00%), Postives = 161/250 (64.40%), Query Frame = 1 

Query: 8   LIDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHRRRTSVTVSYVFAP 67
           L +   +I SY  N++LAA+ISLLLV+LFVLLLH YA  F  H R R R+S T+S+VF  
Sbjct: 16  LSNLVSTISSYEGNVLLAAIISLLLVILFVLLLHLYAKWFLAHARQRSRSSSTLSHVFPH 75

Query: 68  PRRSRFDSVHFD---LSSAPSKGLDPSVISAIPLFVYESEE-------KKCAAAMECVIC 127
            R   F +  FD    +S+PSKGLDPS+IS+IPLFV++ +E       K     ++CV+C
Sbjct: 76  DRFRHFHAFSFDNNASASSPSKGLDPSLISSIPLFVFKLDEHSDNNNKKHGLHNLDCVVC 135

Query: 128 LSEFEERELGRRLPKCSHGFHLECIDMWLNSHANCPVCRQPVIGEVVDCSDAAESGEREI 187
           LS FE+ ++GR LPKC HGFHLECIDMWL+SH+NCP+CR PV+  + + +++  S    +
Sbjct: 136 LSPFEDNDVGRNLPKCGHGFHLECIDMWLHSHSNCPICRAPVL--LTNDAESQVSSAETV 195

Query: 188 GREIVMEEGQRNEGQNGQFSSSSSSSSSSSSSSSFDPPLMSLGASLMRMLSRNRSDGRIF 247
           G  +       + G++ Q ++         S+SS      S+G SL RMLSRNRS+ ++F
Sbjct: 196 GESL-------DSGRHHQIAAPIDDDDDDLSASS------SIGCSLKRMLSRNRSESKVF 250

[Close]
BLAST of ClCG03G000540 vs. TrEMBL
Match: A0A061GXF4_THECC (Toxicos en levadura 2, putative OS=Theobroma cacao GN=TCM_042177 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.1e-52
Identity = 125/246 (50.81%), Postives = 163/246 (66.26%), Query Frame = 1 

Query: 14  SIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHRRRTS-VTVSYVFAPPRRSR 73
           SI SY+ N+MLAA+ISLLLV+LFVLLLH YA  F    R R R+S ++VS+VF P R  R
Sbjct: 22  SISSYDGNVMLAAVISLLLVILFVLLLHVYAKWFLAQARQRSRSSSMSVSHVFRPDRFHR 81

Query: 74  FDSVHFDLS--SAPSKGLDPSVISAIPLFVYESEEKKCAAAMECVICLSEFEERELGRRL 133
           F +  FD +  S+P KGLD SVIS+IPLFVY  EE K    +ECVICLS FE+ ++GR L
Sbjct: 82  FHAFTFDTTFRSSPLKGLDSSVISSIPLFVYTMEEYK--HNLECVICLSPFEDDDVGRNL 141

Query: 134 PKCSHGFHLECIDMWLNSHANCPVCRQPVIG--EVVDCS-DAAESGEREIGREIVMEEGQ 193
           PKC H FH+ECIDMWL SH+NCP+CR PV+   +V D    + ES    + RE+ + +G 
Sbjct: 142 PKCGHCFHVECIDMWLQSHSNCPICRAPVLSNDKVADSEVSSLESVGVLLNREVGVIDGN 201

Query: 194 RNEGQNGQFSSSSSSSSSS------SSSSSFDPPLMSLGASLMRMLSRNRSDGRIFPSSN 248
                  + S S++  +++      S+SSS      SLG SL RMLSRNRS+ ++FPSSN
Sbjct: 202 LRLDNLTELSDSNNRPTAAADDDILSASSSSLTLSSSLGCSLKRMLSRNRSERKVFPSSN 261

[Close]
BLAST of ClCG03G000540 vs. TrEMBL
Match: W9QQP8_9ROSA (RING-H2 finger protein ATL2 OS=Morus notabilis GN=L484_011677 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.0e-51
Identity = 124/243 (51.03%), Postives = 154/243 (63.37%), Query Frame = 1 

Query: 13  QSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFP------HPRHRRRTSVTVSYVFA 72
           +SIF+Y+SN+MLAALISLL V+LFVLLLH YA  F        H RHR  TSV VS V +
Sbjct: 20  ESIFAYDSNVMLAALISLLFVILFVLLLHVYAKWFLAQAHTQAHRRHRS-TSVAVSRVLS 79

Query: 73  PPRRSRFDSVHF-----DLSSAP--SKGLDPSVISAIPLFVYESEEKKCAAAMECVICLS 132
           P R +      F      LS+AP  SKGLD S ISAIPLFVY  E+    A +ECVICLS
Sbjct: 80  PARFNNLPPSSFVIDLASLSTAPANSKGLDASAISAIPLFVYGGEK----AGLECVICLS 139

Query: 133 EFEERELGRRLPKCSHGFHLECIDMWLNSHANCPVCRQPVIGEVVDCSDAAESGEREIG- 192
            F++ E+GRRLPKC H FH EC+DMWL SH+NCP+CR PV+ EV+  +    + +   G 
Sbjct: 140 GFDDGEVGRRLPKCGHEFHRECVDMWLGSHSNCPICRAPVVSEVISFAGDGTAADAVAGD 199

Query: 193 REIVMEEGQRNEGQNGQFSSSSSSSSSSSSSSSFDPPLMSLGASLMRMLSRNRSDGRIFP 242
            + V      + G NG+ S  S S SSSSS SSF       G SL RMLS+N S+ ++FP
Sbjct: 200 GDSVTVLDVSSSGDNGESSVGSDSCSSSSSPSSF-------GCSLKRMLSKNWSENKVFP 250

[Close]
BLAST of ClCG03G000540 vs. TAIR10
Match: AT5G58580.1 (AT5G58580.1 TOXICOS EN LEVADURA 63)

HSP 1 Score: 154.8 bits (390), Expect = 6.7e-38
Identity = 92/208 (44.23%), Postives = 116/208 (55.77%), Query Frame = 1 

Query: 3   SNSTSLIDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFP------------- 62
           S  +SL  F + + SYNSN++LAAL+ LLLVVLFVLLLH YA  F+              
Sbjct: 10  SVKSSLSSFLKILSSYNSNVLLAALVFLLLVVLFVLLLHFYARFFWSPSHQDFSAAARHR 69

Query: 63  --HPRHRRRTSVTVSYVFAPPRRSRFDSVHFDLSSAP--SKGLDPSVISAIPLFVYESEE 122
               R+RRRT  T   + + P     D V    ++A    KGLD SVIS+IPLFVYE  E
Sbjct: 70  RRRRRNRRRTVTTTRIIPSLPLGGFDDGVSSPAATATRDDKGLDSSVISSIPLFVYEENE 129

Query: 123 KKCAAAMECVICLSEFEERELGRRLPKCSHGFHLECIDMWLNSHANCPVCRQPVIGEVVD 182
           ++     ECVICL  +E  + GR+L  C HGFH+ECIDMWL+SH+ CP+CR PV+  V D
Sbjct: 130 EEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSD 189

Query: 183 CSD---AAESGEREIGREIVMEEGQRNE 191
             +   A  + E E    + M     NE
Sbjct: 190 EENLKLAVNAVEEEAEVRLQMSPAGENE 217

[Close]
BLAST of ClCG03G000540 vs. TAIR10
Match: AT3G16720.1 (AT3G16720.1 TOXICOS EN LEVADURA 2)

HSP 1 Score: 120.2 bits (300), Expect = 1.8e-27
Identity = 64/168 (38.10%), Postives = 93/168 (55.36%), Query Frame = 1 

Query: 16  FSYNSNIMLAALISLLLVVLFVLLLHAYANCFF--PHPRHRRRTS----VTVSYVFAPPR 75
           ++ +  IML+A++ L  VV+ ++ LH YA  +      RH RR S     T+ +  A P 
Sbjct: 24  YAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPS 83

Query: 76  RSRFDSVHFDLSSAPSKGLDPSVISAIPLFVYESEEKKCAAAMECVICLSEFEERELGRR 135
            +         S   S+GLDP+VI ++P+F +  E  K    +EC +CLSEFEE E GR 
Sbjct: 84  TAA-------TSVVASRGLDPNVIKSLPVFTFSDETHK--DPIECAVCLSEFEESETGRV 143

Query: 136 LPKCSHGFHLECIDMWLNSHANCPVCRQPVIGEVVDCSDAAESGEREI 178
           LP C H FH++CIDMW +SH+ CP+CR  ++  +      A + ERE+
Sbjct: 144 LPNCQHTFHVDCIDMWFHSHSTCPLCRS-LVESLAGIESTAAAREREV 181

[Close]
BLAST of ClCG03G000540 vs. TAIR10
Match: AT3G62690.1 (AT3G62690.1 AtL5)

HSP 1 Score: 118.6 bits (296), Expect = 5.3e-27
Identity = 74/206 (35.92%), Postives = 102/206 (49.51%), Query Frame = 1 

Query: 9   IDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHRRRTSVTVSYVFAPP 68
           ++   S +S N  IMLA++I L + V+ +L  H+YA   F     R R  ++        
Sbjct: 15  MNHGSSRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRRIRRRISAHL----- 74

Query: 69  RRSRFDSVHFDLSSAPSKGLDPSVISAIPLFVYESEEKKCAAAMECVICLSEFEERELGR 128
            RS   +     SS+    LDP+V+  IP+FVY  +  + +   EC +CLSEFEE + GR
Sbjct: 75  -RSLAAARDPTQSSSSLSPLDPTVLEKIPIFVYSVKTHE-SPLEECSVCLSEFEEDDEGR 134

Query: 129 RLPKCSHGFHLECIDMWLNSHANCPVCRQPVIGEVVDCSDAAESGEREIGREIVMEEGQR 188
            LPKC H FH++CID W  S ++CP+CR PV         A    E E    +       
Sbjct: 135 VLPKCGHVFHVDCIDTWFRSRSSCPLCRAPV-------QPAQPVTEPEPVAAVFPSVKPI 194

Query: 189 NEGQNGQFSSSSSSSSSSSSSSSFDP 215
            + + G  SSS  S SS+ SSSS  P
Sbjct: 195 EDTEAGSSSSSDESESSTPSSSSGSP 206

[Close]
BLAST of ClCG03G000540 vs. TAIR10
Match: AT2G47560.1 (AT2G47560.1 RING/U-box superfamily protein)

HSP 1 Score: 112.1 bits (279), Expect = 5.0e-25
Identity = 64/158 (40.51%), Postives = 85/158 (53.80%), Query Frame = 1 

Query: 9   IDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHRRRTSVTVSYVFAPP 68
           +    S ++ N  IML+++I L + V+ +L  H+YA   F   RH RR            
Sbjct: 15  VSHTSSGYALNGKIMLSSVIVLFVAVIMILCFHSYARWLFR--RHNRRI----------- 74

Query: 69  RRSRFDSVHFDLSSAP-SKGLDPSVISAIPLFVYES------EEKKCAAAMECVICLSEF 128
            R R  S    LS++P  + LD +V+  IP+FVY S      EEK+     EC +CLSEF
Sbjct: 75  -RRRIRSHLRTLSASPRDQALDQAVLDKIPIFVYSSKNPPPPEEKE-----ECSVCLSEF 134

Query: 129 EERELGRRLPKCSHGFHLECIDMWLNSHANCPVCRQPV 160
           EE + GR LPKC H FH++CID W  S + CP+CR PV
Sbjct: 135 EEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPV 153

[Close]
BLAST of ClCG03G000540 vs. TAIR10
Match: AT2G42360.1 (AT2G42360.1 RING/U-box superfamily protein)

HSP 1 Score: 107.1 bits (266), Expect = 1.6e-23
Identity = 76/226 (33.63%), Postives = 112/226 (49.56%), Query Frame = 1 

Query: 14  SIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHRRRTSVTVSYVFAPPRRSRF 73
           S +  NS IMLAA+ SL  V+L V  LH YA       R RR     +  +F  P     
Sbjct: 23  STYDLNSKIMLAAVASLSGVILIVFALHLYARFVL---RRRREAFRGLPVIFRHP----- 82

Query: 74  DSVHFDLSSAPSKGLDPSVISAIPLFVYESEEKKCAAAMECVICLSEFEERELGRRLPKC 133
               F++   P +GL+P+VI+++P F   + +   A+A EC +CLS  +E++  R LP C
Sbjct: 83  ----FEM---PKRGLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNC 142

Query: 134 SHGFHLECIDMWLNSHANCPVCRQPVIGEVVDCSDAAESGERE--IG-REIVMEEGQRNE 193
            H FH++C+D WL + + CPVCR       V+     E   RE  +G    ++ E + N 
Sbjct: 143 KHIFHVDCVDTWLTTCSTCPVCRTE-----VEPRPRLEPEPREGPVGTAPQLLVETRLN- 202

Query: 194 GQNGQFSSSSSSSSSSSSSSSFDPPLMSLGASLMRMLSRNRSDGRI 237
                  +  ++SSSSS + +   P   L  S  ++L+R RS  RI
Sbjct: 203 ------LTVEAASSSSSDNKTVVSPASRLN-SFRKILTRERSSNRI 220

[Close]
BLAST of ClCG03G000540 vs. NCBI nr
Match: gi|659115015|ref|XP_008457344.1| (PREDICTED: RING-H2 finger protein ATL63 isoform X1 [Cucumis melo])

HSP 1 Score: 418.3 bits (1074), Expect = 9.3e-114
Identity = 219/253 (86.56%), Postives = 227/253 (89.72%), Query Frame = 1 

Query: 2   ASNSTSLIDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHRRRTSVTV 61
           +SNSTSL  FAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHRRRTSVTV
Sbjct: 3   SSNSTSLTQFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHRRRTSVTV 62

Query: 62  SYVFAPPRRSRFDSV-HFDLSSAPSKGLDPSVISAIPLFVYESEEKKCAAAMECVICLSE 121
           SYV APPR SRFDSV  FDL SAPSKGLDPSVISAIPLFVYESEEKKCAA MECVICLSE
Sbjct: 63  SYVLAPPRLSRFDSVVPFDLGSAPSKGLDPSVISAIPLFVYESEEKKCAATMECVICLSE 122

Query: 122 FEERELGRRLPKCSHGFHLECIDMWLNSHANCPVCRQPVIGEVVDCSDAAESGEREIGRE 181
           FEERELGRRLPKC HGFHLECIDMWLNSHANCPVCR+PVIGE VDCSDAAESGE EIGRE
Sbjct: 123 FEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAAESGEGEIGRE 182

Query: 182 IVMEEGQRNEGQNGQF----SSSSSSSSSSSSSSSFDPP--LMSLGASLMRMLSRNRSDG 241
            V      NEGQ+GQF    SSSSSSSSSSSSSSS DPP  + S+GASL+R+LSRNRSDG
Sbjct: 183 TV------NEGQSGQFNSDSSSSSSSSSSSSSSSSIDPPPLMSSIGASLIRILSRNRSDG 242

Query: 242 RIFPSSNGDELDV 248
           RIFPSSNG+ELDV
Sbjct: 243 RIFPSSNGEELDV 249

[Close]
BLAST of ClCG03G000540 vs. NCBI nr
Match: gi|659115017|ref|XP_008457345.1| (PREDICTED: RING-H2 finger protein ATL63 isoform X2 [Cucumis melo])

HSP 1 Score: 406.0 bits (1042), Expect = 4.8e-110
Identity = 212/248 (85.48%), Postives = 220/248 (88.71%), Query Frame = 1 

Query: 2   ASNSTSLIDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHRRRTSVTV 61
           +SNSTSL  FAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHRRRTSVTV
Sbjct: 3   SSNSTSLTQFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHRRRTSVTV 62

Query: 62  SYVFAPPRRSRFDSV-HFDLSSAPSKGLDPSVISAIPLFVYESEEKKCAAAMECVICLSE 121
           SYV APPR SRFDSV  FDL SAPSKGLDPSVISAIPLFVYESEEKKCAA MECVICLSE
Sbjct: 63  SYVLAPPRLSRFDSVVPFDLGSAPSKGLDPSVISAIPLFVYESEEKKCAATMECVICLSE 122

Query: 122 FEERELGRRLPKCSHGFHLECIDMWLNSHANCPVCRQPVIGEVVDCSDAAESGEREIGRE 181
           FEERELGRRLPKC HGFHLECIDMWLNSHANCPVCR+PVIGE VDCSDAAESGE EIGRE
Sbjct: 123 FEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAAESGEGEIGRE 182

Query: 182 IVMEEGQRNEGQNGQFSSSSSSSSSSSSSSSFDPPLM-SLGASLMRMLSRNRSDGRIFPS 241
            V      NEGQ+GQF+S SSSSSS        PPLM S+GASL+R+LSRNRSDGRIFPS
Sbjct: 183 TV------NEGQSGQFNSDSSSSSSID-----PPPLMSSIGASLIRILSRNRSDGRIFPS 239

Query: 242 SNGDELDV 248
           SNG+ELDV
Sbjct: 243 SNGEELDV 239

[Close]
BLAST of ClCG03G000540 vs. NCBI nr
Match: gi|449455140|ref|XP_004145311.1| (PREDICTED: RING-H2 finger protein ATL63 [Cucumis sativus])

HSP 1 Score: 392.1 bits (1006), Expect = 7.1e-106
Identity = 208/251 (82.87%), Postives = 218/251 (86.85%), Query Frame = 1 

Query: 3   SNSTSLIDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHRRRTSVTVS 62
           +NSTSL  FAQ+IFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRH RRTSVTVS
Sbjct: 4   TNSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSVTVS 63

Query: 63  YVFAPPRRSRFDSVHFDLSSAPS--KGLDPSVISAIPLFVYESEEKKCAAA---MECVIC 122
           YV APPR SRFDSV FDL SAPS  KGLDPSVISAIPLFVYESEEKKCAAA   MECVIC
Sbjct: 64  YVLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVIC 123

Query: 123 LSEFEERELGRRLPKCSHGFHLECIDMWLNSHANCPVCRQPVIGEVVDCSDAAESGEREI 182
           LSEFEERELGRRLPKC HGFHLECIDMWLNSHANCPVCR+PVIGE VDCSDA ESGE EI
Sbjct: 124 LSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESGEGEI 183

Query: 183 GREIVMEEGQRNEGQNGQFSSSSSSSSSSSSSSSFDPPLM-SLGASLMRMLSRNRSDGRI 242
           GRE V      NEGQ+ QF+S SSSSS+SS      PPLM S+GASL+R+LSRNRSDGRI
Sbjct: 184 GRETV------NEGQSVQFNSDSSSSSTSSVD---PPPLMSSIGASLIRILSRNRSDGRI 243

Query: 243 FPSSNGDELDV 248
           FPSSNG+EL V
Sbjct: 244 FPSSNGEELGV 245

[Close]
BLAST of ClCG03G000540 vs. NCBI nr
Match: gi|700210733|gb|KGN65829.1| (hypothetical protein Csa_1G532370 [Cucumis sativus])

HSP 1 Score: 392.1 bits (1006), Expect = 7.1e-106
Identity = 208/251 (82.87%), Postives = 218/251 (86.85%), Query Frame = 1 

Query: 3   SNSTSLIDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHRRRTSVTVS 62
           +NSTSL  FAQ+IFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRH RRTSVTVS
Sbjct: 62  TNSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSVTVS 121

Query: 63  YVFAPPRRSRFDSVHFDLSSAPS--KGLDPSVISAIPLFVYESEEKKCAAA---MECVIC 122
           YV APPR SRFDSV FDL SAPS  KGLDPSVISAIPLFVYESEEKKCAAA   MECVIC
Sbjct: 122 YVLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVIC 181

Query: 123 LSEFEERELGRRLPKCSHGFHLECIDMWLNSHANCPVCRQPVIGEVVDCSDAAESGEREI 182
           LSEFEERELGRRLPKC HGFHLECIDMWLNSHANCPVCR+PVIGE VDCSDA ESGE EI
Sbjct: 182 LSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESGEGEI 241

Query: 183 GREIVMEEGQRNEGQNGQFSSSSSSSSSSSSSSSFDPPLM-SLGASLMRMLSRNRSDGRI 242
           GRE V      NEGQ+ QF+S SSSSS+SS      PPLM S+GASL+R+LSRNRSDGRI
Sbjct: 242 GRETV------NEGQSVQFNSDSSSSSTSSVD---PPPLMSSIGASLIRILSRNRSDGRI 301

Query: 243 FPSSNGDELDV 248
           FPSSNG+EL V
Sbjct: 302 FPSSNGEELGV 303

[Close]
BLAST of ClCG03G000540 vs. NCBI nr
Match: gi|225434526|ref|XP_002278655.1| (PREDICTED: RING-H2 finger protein ATL63 [Vitis vinifera])

HSP 1 Score: 225.7 bits (574), Expect = 8.8e-56
Identity = 129/261 (49.43%), Postives = 168/261 (64.37%), Query Frame = 1 

Query: 2   ASNSTSLIDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHRRRTSVTV 61
           +S S+   DF +S+FSYN N+MLAA++SLLLV+LFVL+LH YA  F  H RHRRR+SV+V
Sbjct: 8   SSISSPFTDFMKSVFSYNGNVMLAAIVSLLLVILFVLVLHIYAKWFLAHARHRRRSSVSV 67

Query: 62  SYVFAPPRRSRFDSVHFD--LSSAPSKGLDPSVISAIPLFVYESEEKKCAAAMECVICLS 121
           S+V  P R   F +  F+  LS +P+KGLD S IS+IPLFVY++EE K    +ECVICLS
Sbjct: 68  SHVLRPTRFHHFHTFTFETTLSGSPTKGLDSSAISSIPLFVYKAEEHK--HGLECVICLS 127

Query: 122 EFEERELGRRLPKCSHGFHLECIDMWLNSHANCPVCRQPVIGE--VVDCSDAA--ESGER 181
            FE+ ++GR LPKC H FH++CIDMWL+SH+NCP+CR P   E   V   D A  + G  
Sbjct: 128 VFEDDDVGRNLPKCGHAFHVQCIDMWLHSHSNCPICRAPAACEKKAVSQPDEAILQEGSI 187

Query: 182 EIGREIVMEEGQRNE------------GQNG----QFSSSSSSSSSSSSSSSFDPPLMSL 241
           E+    + + G  +E             +NG        S S+SSS SS SS      SL
Sbjct: 188 ELSEAFIGDLGLIDEDSPMELVVEIPDSENGNAVTDIHDSLSASSSLSSQSS------SL 247

The following BLAST results are available for this feature:
BLAST of ClCG03G000540 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATL63_ARATH1.2e-3644.23RING-H2 finger protein ATL63 OS=Arabidopsis thaliana GN=ATL63 PE=2 SV=1[more]
ATL2_ARATH3.3e-2638.10RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2 SV=2[more]
ATL5_ARATH9.5e-2635.92RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=1[more]
ATL64_ARATH8.9e-2440.51RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2 SV=1[more]
ATL41_ARATH2.9e-2233.63E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana GN=ATL41 PE=1 SV=1[more]
BLAST of ClCG03G000540 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXP0_CUCSA4.9e-10682.87Uncharacterized protein OS=Cucumis sativus GN=Csa_1G532370 PE=4 SV=1[more]
D7SJU6_VITVI6.1e-5649.43Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g06930 PE=4 SV=... [more]
A0A0D2QKV6_GOSRA4.9e-5346.00Uncharacterized protein OS=Gossypium raimondii GN=B456_003G147000 PE=4 SV=1[more]
A0A061GXF4_THECC1.1e-5250.81Toxicos en levadura 2, putative OS=Theobroma cacao GN=TCM_042177 PE=4 SV=1[more]
W9QQP8_9ROSA2.0e-5151.03RING-H2 finger protein ATL2 OS=Morus notabilis GN=L484_011677 PE=4 SV=1[more]
BLAST of ClCG03G000540 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G58580.16.7e-3844.23 TOXICOS EN LEVADURA 63[more]
AT3G16720.11.8e-2738.10 TOXICOS EN LEVADURA 2[more]
AT3G62690.15.3e-2735.92 AtL5[more]
AT2G47560.15.0e-2540.51 RING/U-box superfamily protein[more]
AT2G42360.11.6e-2333.63 RING/U-box superfamily protein[more]
BLAST of ClCG03G000540 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659115015|ref|XP_008457344.1|9.3e-11486.56PREDICTED: RING-H2 finger protein ATL63 isoform X1 [Cucumis melo][more]
gi|659115017|ref|XP_008457345.1|4.8e-11085.48PREDICTED: RING-H2 finger protein ATL63 isoform X2 [Cucumis melo][more]
gi|449455140|ref|XP_004145311.1|7.1e-10682.87PREDICTED: RING-H2 finger protein ATL63 [Cucumis sativus][more]
gi|700210733|gb|KGN65829.1|7.1e-10682.87hypothetical protein Csa_1G532370 [Cucumis sativus][more]
gi|225434526|ref|XP_002278655.1|8.8e-5649.43PREDICTED: RING-H2 finger protein ATL63 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009987 cellular process
biological_process GO:0050789 regulation of biological process
biological_process GO:0044267 cellular protein metabolic process
biological_process GO:0050794 regulation of cellular process
biological_process GO:0006970 response to osmotic stress
cellular_component GO:0044464 cell part
cellular_component GO:0005575 cellular_component
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0012505 endomembrane system
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0005768 endosome
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG03G000540.1ClCG03G000540.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 113..156
score: 2.3
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 114..155
score: 1.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 114..156
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 112..159
score: 4.3
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 77..181
score: 2.5E-70coord: 1..61
score: 2.5
NoneNo IPR availablePANTHERPTHR14155:SF135RING-H2 FINGER PROTEIN ATL63coord: 77..181
score: 2.5E-70coord: 1..61
score: 2.5
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 113..160
score: 4.24

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG03G000540Csa1G532370Cucumber (Chinese Long) v2cuwcgB047
ClCG03G000540MELO3C020529Melon (DHL92) v3.5.1mewcgB149
ClCG03G000540Cla008146Watermelon (97103) v1wcgwmB223
ClCG03G000540Cla97C03G051320Watermelon (97103) v2wcgwmbB186
ClCG03G000540Bhi08G000400Wax gourdwcgwgoB340
ClCG03G000540CSPI01G24090Wild cucumber (PI 183967)cpiwcgB050
ClCG03G000540Cucsa.151710Cucumber (Gy14) v1cgywcgB256
ClCG03G000540CmaCh13G000500Cucurbita maxima (Rimu)cmawcgB194
ClCG03G000540CmaCh01G006860Cucurbita maxima (Rimu)cmawcgB404
ClCG03G000540CmoCh01G007140Cucurbita moschata (Rifu)cmowcgB403
ClCG03G000540CmoCh13G000410Cucurbita moschata (Rifu)cmowcgB184
ClCG03G000540Lsi02G012600Bottle gourd (USVL1VR-Ls)lsiwcgB185
ClCG03G000540Cp4.1LG20g07950Cucurbita pepo (Zucchini)cpewcgB467
ClCG03G000540Cp4.1LG02g11910Cucurbita pepo (Zucchini)cpewcgB503
ClCG03G000540CsGy1G023570Cucumber (Gy14) v2cgybwcgB044
ClCG03G000540MELO3C020529.2Melon (DHL92) v3.6.1medwcgB141
ClCG03G000540Carg26032Silver-seed gourdcarwcgB0599
ClCG03G000540Carg07055Silver-seed gourdcarwcgB0504
ClCG03G000540CsaV3_1G036400Cucumber (Chinese Long) v3cucwcgB051
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG03G000540Watermelon (97103) v2wcgwmbB187
ClCG03G000540Wax gourdwcgwgoB337
ClCG03G000540Watermelon (Charleston Gray)wcgwcgB140
ClCG03G000540Cucurbita maxima (Rimu)cmawcgB646
ClCG03G000540Cucurbita moschata (Rifu)cmowcgB648
ClCG03G000540Cucurbita moschata (Rifu)cmowcgB649
ClCG03G000540Cucurbita pepo (Zucchini)cpewcgB380
ClCG03G000540Silver-seed gourdcarwcgB0648