Cp4.1LG02g11910 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG02g11910
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRING-H2 finger protein ATL2
LocationCp4.1LG02 : 10837172 .. 10837915 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTTCAATTCCACTTCACTCTCTGATTTCACTCAGAGCATTTTCTCCTACAACAGCAACGTCATTCTCGCCGCTCTCATTTCTCTTCTCCTCGTCGTCCTCTTTGTCCTTCTCCTCCATGCCTACGCCAATTGTTTCTTCCCTCGGCCTCGCCACCGTCATGCTCAGCGGAGTTCCGTCACTGTCTCCTACGTCCTTGGACCGCCTCGCCTCTCGCGTTTCGAATCGATTCCGTTCGATTTAGGCTTCGCTCAGTCGAAAGGTCTTGACTCGTCTGTAATCTCTGCGATTCCTCTGTTCGTTTATGAATCGGAGGAGAAGAAGTGTGCAACGGTGATGGAGTGCGTGATTTGCCTCAGTGAATTTGAGGAACGAGAAATCGGACGGCGGTTGCCGATATGTAACCATGGATTTCACCTTGAATGCATCGATATGTGGTTGAATTCTCACGCGAATTGTCCTGTTTGTAGAGCGCCAGTAGTTGCAGAGGCGGTGGAATCTGGCGGGTTGAGCGGCGAGAGTGAAATCGGAGAAGAGATTGTAACGGAGGAGCGGACTAATTGTGAGATTCAGAGAAACGAGGAGCAAAACGGTCAGTTTCATTCTTCTTCTTCCTCTTCAAGTTCTTCGACTGATCCGCCATTGATGTCGCTTGGAGCATCTTTGAAGCGAATGTTGAGTAGAAACAGATCGAATGGAAGGATTTTCCCCTCTTCCAATGGCGATGAATTAAATGTTTGA

mRNA sequence

ATGGCGTTCAATTCCACTTCACTCTCTGATTTCACTCAGAGCATTTTCTCCTACAACAGCAACGTCATTCTCGCCGCTCTCATTTCTCTTCTCCTCGTCGTCCTCTTTGTCCTTCTCCTCCATGCCTACGCCAATTGTTTCTTCCCTCGGCCTCGCCACCGTCATGCTCAGCGGAGTTCCGTCACTGTCTCCTACGTCCTTGGACCGCCTCGCCTCTCGCGTTTCGAATCGATTCCGTTCGATTTAGGCTTCGCTCAGTCGAAAGGTCTTGACTCGTCTGTAATCTCTGCGATTCCTCTGTTCGTTTATGAATCGGAGGAGAAGAAGTGTGCAACGGTGATGGAGTGCGTGATTTGCCTCAGTGAATTTGAGGAACGAGAAATCGGACGGCGGTTGCCGATATGTAACCATGGATTTCACCTTGAATGCATCGATATGTGGTTGAATTCTCACGCGAATTGTCCTGTTTGTAGAGCGCCAGTAGTTGCAGAGGCGGTGGAATCTGGCGGGTTGAGCGGCGAGAGTGAAATCGGAGAAGAGATTGTAACGGAGGAGCGGACTAATTGTGAGATTCAGAGAAACGAGGAGCAAAACGGTCAGTTTCATTCTTCTTCTTCCTCTTCAAGTTCTTCGACTGATCCGCCATTGATGTCGCTTGGAGCATCTTTGAAGCGAATGTTGAGTAGAAACAGATCGAATGGAAGGATTTTCCCCTCTTCCAATGGCGATGAATTAAATGTTTGA

Coding sequence (CDS)

ATGGCGTTCAATTCCACTTCACTCTCTGATTTCACTCAGAGCATTTTCTCCTACAACAGCAACGTCATTCTCGCCGCTCTCATTTCTCTTCTCCTCGTCGTCCTCTTTGTCCTTCTCCTCCATGCCTACGCCAATTGTTTCTTCCCTCGGCCTCGCCACCGTCATGCTCAGCGGAGTTCCGTCACTGTCTCCTACGTCCTTGGACCGCCTCGCCTCTCGCGTTTCGAATCGATTCCGTTCGATTTAGGCTTCGCTCAGTCGAAAGGTCTTGACTCGTCTGTAATCTCTGCGATTCCTCTGTTCGTTTATGAATCGGAGGAGAAGAAGTGTGCAACGGTGATGGAGTGCGTGATTTGCCTCAGTGAATTTGAGGAACGAGAAATCGGACGGCGGTTGCCGATATGTAACCATGGATTTCACCTTGAATGCATCGATATGTGGTTGAATTCTCACGCGAATTGTCCTGTTTGTAGAGCGCCAGTAGTTGCAGAGGCGGTGGAATCTGGCGGGTTGAGCGGCGAGAGTGAAATCGGAGAAGAGATTGTAACGGAGGAGCGGACTAATTGTGAGATTCAGAGAAACGAGGAGCAAAACGGTCAGTTTCATTCTTCTTCTTCCTCTTCAAGTTCTTCGACTGATCCGCCATTGATGTCGCTTGGAGCATCTTTGAAGCGAATGTTGAGTAGAAACAGATCGAATGGAAGGATTTTCCCCTCTTCCAATGGCGATGAATTAAATGTTTGA

Protein sequence

MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICLSEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGGLSGESEIGEEIVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNGRIFPSSNGDELNV
Homology
[Close]
BLAST of Cp4.1LG02g11910 vs. Swiss-Prot
Match: ATL63_ARATH (RING-H2 finger protein ATL63 OS=Arabidopsis thaliana GN=ATL63 PE=2 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 4.5e-36
Identity = 88/181 (48.62%), Postives = 113/181 (62.43%), Query Frame = 1 

Query: 6   TSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFP------------RPRH 65
           +SLS F + + SYNSNV+LAAL+ LLLVVLFVLLLH YA  F+             R R 
Sbjct: 13  SSLSSFLKILSSYNSNVLLAALVFLLLVVLFVLLLHFYARFFWSPSHQDFSAAARHRRRR 72

Query: 66  RHAQRSSVTVSYVLGPPRLSRFE---SIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKC 125
           R  +R +VT + ++    L  F+   S P        KGLDSSVIS+IPLFVYE  E++ 
Sbjct: 73  RRNRRRTVTTTRIIPSLPLGGFDDGVSSPAATATRDDKGLDSSVISSIPLFVYEENEEEE 132

Query: 126 ATVMECVICLSEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGG 172
               ECVICL  +E  + GR+L  C HGFH+ECIDMWL+SH+ CP+CR+PV+A   +   
Sbjct: 133 DEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSDEEN 192

[Close]
BLAST of Cp4.1LG02g11910 vs. Swiss-Prot
Match: ATL2_ARATH (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2 SV=2)

HSP 1 Score: 109.0 bits (271), Expect = 7.5e-23
Identity = 68/203 (33.50%), Postives = 108/203 (53.20%), Query Frame = 1 

Query: 16  FSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS----VTVSYVLGPPR 75
           ++ +  ++L+A++ L  VV+ ++ LH YA  +  R R RH +R S     T+ +    P 
Sbjct: 24  YAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPS 83

Query: 76  LSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICLSEFEEREIGRR 135
            +    +        S+GLD +VI ++P+F +  E  K    +EC +CLSEFEE E GR 
Sbjct: 84  TAATSVVA-------SRGLDPNVIKSLPVFTFSDETHK--DPIECAVCLSEFEESETGRV 143

Query: 136 LPICNHGFHLECIDMWLNSHANCPVCRAPVVAEA-VESGGLSGESEIGEEIVTEERTNCE 195
           LP C H FH++CIDMW +SH+ CP+CR+ V + A +ES   + E E+   + ++     E
Sbjct: 144 LPNCQHTFHVDCIDMWFHSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDPVLVIE 203

Query: 196 IQRNEEQNGQFHSSSSSSSSSTD 214
              +     + H S SS     D
Sbjct: 204 PSSSSGLTDEPHGSGSSQMLRED 217

[Close]
BLAST of Cp4.1LG02g11910 vs. Swiss-Prot
Match: ATL64_ARATH (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 6.4e-22
Identity = 62/174 (35.63%), Postives = 91/174 (52.30%), Query Frame = 1 

Query: 12  TQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVTVSYVLGPPR 71
           T S ++ N  ++L+++I L + V+ +L  H+YA   F R   R  +R    +  +   PR
Sbjct: 18  TSSGYALNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHNRRIRRRIRSHLRTLSASPR 77

Query: 72  LSRFESIPFDLGFAQSKGLDSSVISAIPLFVYES------EEKKCATVMECVICLSEFEE 131
                           + LD +V+  IP+FVY S      EEK+     EC +CLSEFEE
Sbjct: 78  ---------------DQALDQAVLDKIPIFVYSSKNPPPPEEKE-----ECSVCLSEFEE 137

Query: 132 REIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVA--EAVESGGLSGESEI 178
            + GR LP C H FH++CID W  S + CP+CRAPV    + +E+G  S  S +
Sbjct: 138 EDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPVQPPFQVIETGSSSSSSPL 171

[Close]
BLAST of Cp4.1LG02g11910 vs. Swiss-Prot
Match: ATL5_ARATH (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.6e-20
Identity = 55/148 (37.16%), Postives = 83/148 (56.08%), Query Frame = 1 

Query: 14  SIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVTVSYVLGPPRLS 73
           S +S N  ++LA++I L + V+ +L  H+YA   F R   R  +R S  +  +      +
Sbjct: 20  SRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRRIRRRISAHLRSLAAARDPT 79

Query: 74  RFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICLSEFEEREIGRRLP 133
           +  S            LD +V+  IP+FVY  +  + + + EC +CLSEFEE + GR LP
Sbjct: 80  QSSS--------SLSPLDPTVLEKIPIFVYSVKTHE-SPLEECSVCLSEFEEDDEGRVLP 139

Query: 134 ICNHGFHLECIDMWLNSHANCPVCRAPV 162
            C H FH++CID W  S ++CP+CRAPV
Sbjct: 140 KCGHVFHVDCIDTWFRSRSSCPLCRAPV 158

[Close]
BLAST of Cp4.1LG02g11910 vs. Swiss-Prot
Match: ATL41_ARATH (E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana GN=ATL41 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 6.6e-19
Identity = 74/224 (33.04%), Postives = 113/224 (50.45%), Query Frame = 1 

Query: 14  SIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVTVSYVLGPPRLS 73
           S +  NS ++LAA+ SL  V+L V  LH YA   F   R R A R         G P + 
Sbjct: 23  STYDLNSKIMLAAVASLSGVILIVFALHLYAR--FVLRRRREAFR---------GLPVIF 82

Query: 74  RFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICLSEFEEREIGRRLP 133
           R    PF++     +GL+ +VI+++P F   + +   A+  EC +CLS  +E++  R LP
Sbjct: 83  RH---PFEM---PKRGLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELP 142

Query: 134 ICNHGFHLECIDMWLNSHANCPVCRAPVVAE-AVESGGLSGESEIGEEIVTEERTNCEIQ 193
            C H FH++C+D WL + + CPVCR  V     +E     G      +++ E R N  ++
Sbjct: 143 NCKHIFHVDCVDTWLTTCSTCPVCRTEVEPRPRLEPEPREGPVGTAPQLLVETRLNLTVE 202

Query: 194 RNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNGRI 237
                     +SSSSS + T     S   S +++L+R RS+ RI
Sbjct: 203 A---------ASSSSSDNKTVVSPASRLNSFRKILTRERSSNRI 220

[Close]
BLAST of Cp4.1LG02g11910 vs. TrEMBL
Match: A0A0A0LXP0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G532370 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 2.6e-86
Identity = 185/254 (72.83%), Postives = 204/254 (80.31%), Query Frame = 1 

Query: 4   NSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVTV 63
           NSTSL+ F Q+IFSYNSN++LAALISLLLVVLFVLLLHAYANCFFP PRH   +R+SVTV
Sbjct: 63  NSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHH--RRTSVTV 122

Query: 64  SYVLGPPRLSRFESIPFDLGFA--QSKGLDSSVISAIPLFVYESEEKKCATV---MECVI 123
           SYVL PPRLSRF+S+PFDLG A   SKGLD SVISAIPLFVYESEEKKCA     MECVI
Sbjct: 123 SYVLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVI 182

Query: 124 CLSEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGGL--SGESE 183
           CLSEFEERE+GRRLP C HGFHLECIDMWLNSHANCPVCR PV+ EAV+      SGE E
Sbjct: 183 CLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESGEGE 242

Query: 184 IGEEIVTEERTNCEIQRNEEQNGQFHS-SSSSSSSSTDPP--LMSLGASLKRMLSRNRSN 243
           IG E V           NE Q+ QF+S SSSSS+SS DPP  + S+GASL R+LSRNRS+
Sbjct: 243 IGRETV-----------NEGQSVQFNSDSSSSSTSSVDPPPLMSSIGASLIRILSRNRSD 302

Query: 244 GRIFPSSNGDELNV 248
           GRIFPSSNG+EL V
Sbjct: 303 GRIFPSSNGEELGV 303

[Close]
BLAST of Cp4.1LG02g11910 vs. TrEMBL
Match: D7SJU6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g06930 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.5e-49
Identity = 124/255 (48.63%), Postives = 169/255 (66.27%), Query Frame = 1 

Query: 5   STSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVTVS 64
           S+  +DF +S+FSYN NV+LAA++SLLLV+LFVL+LH YA  F    RHR  +RSSV+VS
Sbjct: 11  SSPFTDFMKSVFSYNGNVMLAAIVSLLLVILFVLVLHIYAKWFLAHARHR--RRSSVSVS 70

Query: 65  YVLGPPRLSRFESIPFD--LGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICLSE 124
           +VL P R   F +  F+  L  + +KGLDSS IS+IPLFVY++EE K    +ECVICLS 
Sbjct: 71  HVLRPTRFHHFHTFTFETTLSGSPTKGLDSSAISSIPLFVYKAEEHKHG--LECVICLSV 130

Query: 125 FEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAE----------AVESGGLS 184
           FE+ ++GR LP C H FH++CIDMWL+SH+NCP+CRAP   E           ++ G + 
Sbjct: 131 FEDDDVGRNLPKCGHAFHVQCIDMWLHSHSNCPICRAPAACEKKAVSQPDEAILQEGSIE 190

Query: 185 -GESEIGEEIVTEERTNCE--IQRNEEQNG----QFHSSSSSSSSSTDPPLMSLGASLKR 241
             E+ IG+  + +E +  E  ++  + +NG      H S S+SSS +     SLG+SLKR
Sbjct: 191 LSEAFIGDLGLIDEDSPMELVVEIPDSENGNAVTDIHDSLSASSSLSSQS-SSLGSSLKR 250

[Close]
BLAST of Cp4.1LG02g11910 vs. TrEMBL
Match: A0A061GXF4_THECC (Toxicos en levadura 2, putative OS=Theobroma cacao GN=TCM_042177 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.3e-47
Identity = 126/253 (49.80%), Postives = 157/253 (62.06%), Query Frame = 1 

Query: 9   SDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVTVSYVLG 68
           S    SI SY+ NV+LAA+ISLLLV+LFVLLLH YA  F  + R R ++ SS++VS+V  
Sbjct: 17  SHLLNSISSYDGNVMLAAVISLLLVILFVLLLHVYAKWFLAQARQR-SRSSSMSVSHVFR 76

Query: 69  PPRLSRFESIPFDLGFAQS--KGLDSSVISAIPLFVYESEEKKCATVMECVICLSEFEER 128
           P R  RF +  FD  F  S  KGLDSSVIS+IPLFVY  EE K    +ECVICLS FE+ 
Sbjct: 77  PDRFHRFHAFTFDTTFRSSPLKGLDSSVISSIPLFVYTMEEYKHN--LECVICLSPFEDD 136

Query: 129 EIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVA---------EAVESGGLSGESEI 188
           ++GR LP C H FH+ECIDMWL SH+NCP+CRAPV++          ++ES G+    E+
Sbjct: 137 DVGRNLPKCGHCFHVECIDMWLQSHSNCPICRAPVLSNDKVADSEVSSLESVGVLLNREV 196

Query: 189 G---EEIVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNG 248
           G     +  +  T      N           S+SSSS      SLG SLKRMLSRNRS  
Sbjct: 197 GVIDGNLRLDNLTELSDSNNRPTAAADDDILSASSSSLTLS-SSLGCSLKRMLSRNRSER 256

[Close]
BLAST of Cp4.1LG02g11910 vs. TrEMBL
Match: V4SCT6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029990mg PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 5.8e-46
Identity = 123/263 (46.77%), Postives = 157/263 (59.70%), Query Frame = 1 

Query: 8   LSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVTVSYVL 67
           L+ F +++ SY+ NV+LAA++SLLLV+LFVLLLH YA  F  + R R + RSS++VS+VL
Sbjct: 2   LNHFLENVSSYDGNVLLAAIVSLLLVILFVLLLHIYAKWFLAQARQRRS-RSSMSVSHVL 61

Query: 68  GPPRLSRFESIPFD-------------LGFAQSKGLDSSVISAIPLFVYESEEKKCATVM 127
            P R   F S  FD             +  + SKGLD+S+I++IPLFVY S E K    +
Sbjct: 62  LPARFHHFHSFTFDVDNNANNNINNTTISSSSSKGLDASLIASIPLFVYTSSEYKQG--L 121

Query: 128 ECVICLSEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGGLSGE 187
           ECVICLS FEE ++GR LP C HGFH+ECIDMWL+SH NCPVCRAPV  E       S E
Sbjct: 122 ECVICLSAFEESDVGRSLPKCGHGFHVECIDMWLHSHLNCPVCRAPVAGEKKVENLDSTE 181

Query: 188 SEIGEEIVTEERTNCE-----------IQRNEEQNGQFHSSSSSSSSSTDPPLMSLGASL 247
           +  G  I  E   N E           ++R  + +   H     + S +     SLG SL
Sbjct: 182 NNEGNSI--EAVANSELLQVVVEGEPRLERVSDASNCDHEVVGITDSISASASSSLGCSL 241

[Close]
BLAST of Cp4.1LG02g11910 vs. TrEMBL
Match: B9HND1_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0009s07800g PE=4 SV=2)

HSP 1 Score: 191.0 bits (484), Expect = 1.7e-45
Identity = 122/239 (51.05%), Postives = 151/239 (63.18%), Query Frame = 1 

Query: 8   LSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVTVSYVL 67
           +S    SI SY+SN++LAA+ISLL+V+LFVLLLH YA  F  + R+R  + SSVT S+VL
Sbjct: 13  MSHLINSISSYDSNIMLAAVISLLVVILFVLLLHIYAKWFLAQARNRR-RSSSVTASHVL 72

Query: 68  GPPRLSRFESIPFDLGFAQS--KGLDSSVISAIPLFVYESEEKKCATVMECVICLSEFEE 127
            P R     +   D  F+ S  KGLD+SVIS+IPLFVY++EE  C   +ECVICLS FEE
Sbjct: 73  LPSRFHHLHNFTIDTTFSTSTSKGLDTSVISSIPLFVYKAEE--CKQGLECVICLSPFEE 132

Query: 128 REIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAE--AVESGGLSGESEIGEEI-- 187
            E GR L  C HGFH+ECIDMWLNSH+NCPVCRAP V++   + S G S E+   E    
Sbjct: 133 NEAGRSLTRCGHGFHVECIDMWLNSHSNCPVCRAPAVSDDNDIASDGKSMEASTRESTDD 192

Query: 188 -----VTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNGR 236
                V + R    I  +E  N   +    S S ST     SLG+SLKRMLSRNRS  +
Sbjct: 193 RGLSDVGDSRLEIVISNSENGNLAVNCDCLSESPSTS---SSLGSSLKRMLSRNRSESK 245

[Close]
BLAST of Cp4.1LG02g11910 vs. TAIR10
Match: AT5G58580.1 (AT5G58580.1 TOXICOS EN LEVADURA 63)

HSP 1 Score: 152.9 bits (385), Expect = 2.6e-37
Identity = 88/181 (48.62%), Postives = 113/181 (62.43%), Query Frame = 1 

Query: 6   TSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFP------------RPRH 65
           +SLS F + + SYNSNV+LAAL+ LLLVVLFVLLLH YA  F+             R R 
Sbjct: 13  SSLSSFLKILSSYNSNVLLAALVFLLLVVLFVLLLHFYARFFWSPSHQDFSAAARHRRRR 72

Query: 66  RHAQRSSVTVSYVLGPPRLSRFE---SIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKC 125
           R  +R +VT + ++    L  F+   S P        KGLDSSVIS+IPLFVYE  E++ 
Sbjct: 73  RRNRRRTVTTTRIIPSLPLGGFDDGVSSPAATATRDDKGLDSSVISSIPLFVYEENEEEE 132

Query: 126 ATVMECVICLSEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGG 172
               ECVICL  +E  + GR+L  C HGFH+ECIDMWL+SH+ CP+CR+PV+A   +   
Sbjct: 133 DEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSDEEN 192

[Close]
BLAST of Cp4.1LG02g11910 vs. TAIR10
Match: AT3G16720.1 (AT3G16720.1 TOXICOS EN LEVADURA 2)

HSP 1 Score: 109.0 bits (271), Expect = 4.2e-24
Identity = 68/203 (33.50%), Postives = 108/203 (53.20%), Query Frame = 1 

Query: 16  FSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS----VTVSYVLGPPR 75
           ++ +  ++L+A++ L  VV+ ++ LH YA  +  R R RH +R S     T+ +    P 
Sbjct: 24  YAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPS 83

Query: 76  LSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICLSEFEEREIGRR 135
            +    +        S+GLD +VI ++P+F +  E  K    +EC +CLSEFEE E GR 
Sbjct: 84  TAATSVVA-------SRGLDPNVIKSLPVFTFSDETHK--DPIECAVCLSEFEESETGRV 143

Query: 136 LPICNHGFHLECIDMWLNSHANCPVCRAPVVAEA-VESGGLSGESEIGEEIVTEERTNCE 195
           LP C H FH++CIDMW +SH+ CP+CR+ V + A +ES   + E E+   + ++     E
Sbjct: 144 LPNCQHTFHVDCIDMWFHSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDPVLVIE 203

Query: 196 IQRNEEQNGQFHSSSSSSSSSTD 214
              +     + H S SS     D
Sbjct: 204 PSSSSGLTDEPHGSGSSQMLRED 217

[Close]
BLAST of Cp4.1LG02g11910 vs. TAIR10
Match: AT2G47560.1 (AT2G47560.1 RING/U-box superfamily protein)

HSP 1 Score: 105.9 bits (263), Expect = 3.6e-23
Identity = 62/174 (35.63%), Postives = 91/174 (52.30%), Query Frame = 1 

Query: 12  TQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVTVSYVLGPPR 71
           T S ++ N  ++L+++I L + V+ +L  H+YA   F R   R  +R    +  +   PR
Sbjct: 18  TSSGYALNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHNRRIRRRIRSHLRTLSASPR 77

Query: 72  LSRFESIPFDLGFAQSKGLDSSVISAIPLFVYES------EEKKCATVMECVICLSEFEE 131
                           + LD +V+  IP+FVY S      EEK+     EC +CLSEFEE
Sbjct: 78  ---------------DQALDQAVLDKIPIFVYSSKNPPPPEEKE-----ECSVCLSEFEE 137

Query: 132 REIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVA--EAVESGGLSGESEI 178
            + GR LP C H FH++CID W  S + CP+CRAPV    + +E+G  S  S +
Sbjct: 138 EDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPVQPPFQVIETGSSSSSSPL 171

[Close]
BLAST of Cp4.1LG02g11910 vs. TAIR10
Match: AT3G62690.1 (AT3G62690.1 AtL5)

HSP 1 Score: 99.8 bits (247), Expect = 2.6e-21
Identity = 55/148 (37.16%), Postives = 83/148 (56.08%), Query Frame = 1 

Query: 14  SIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVTVSYVLGPPRLS 73
           S +S N  ++LA++I L + V+ +L  H+YA   F R   R  +R S  +  +      +
Sbjct: 20  SRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRRIRRRISAHLRSLAAARDPT 79

Query: 74  RFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICLSEFEEREIGRRLP 133
           +  S            LD +V+  IP+FVY  +  + + + EC +CLSEFEE + GR LP
Sbjct: 80  QSSS--------SLSPLDPTVLEKIPIFVYSVKTHE-SPLEECSVCLSEFEEDDEGRVLP 139

Query: 134 ICNHGFHLECIDMWLNSHANCPVCRAPV 162
            C H FH++CID W  S ++CP+CRAPV
Sbjct: 140 KCGHVFHVDCIDTWFRSRSSCPLCRAPV 158

[Close]
BLAST of Cp4.1LG02g11910 vs. TAIR10
Match: AT2G42360.1 (AT2G42360.1 RING/U-box superfamily protein)

HSP 1 Score: 95.9 bits (237), Expect = 3.7e-20
Identity = 74/224 (33.04%), Postives = 113/224 (50.45%), Query Frame = 1 

Query: 14  SIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVTVSYVLGPPRLS 73
           S +  NS ++LAA+ SL  V+L V  LH YA   F   R R A R         G P + 
Sbjct: 23  STYDLNSKIMLAAVASLSGVILIVFALHLYAR--FVLRRRREAFR---------GLPVIF 82

Query: 74  RFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICLSEFEEREIGRRLP 133
           R    PF++     +GL+ +VI+++P F   + +   A+  EC +CLS  +E++  R LP
Sbjct: 83  RH---PFEM---PKRGLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELP 142

Query: 134 ICNHGFHLECIDMWLNSHANCPVCRAPVVAE-AVESGGLSGESEIGEEIVTEERTNCEIQ 193
            C H FH++C+D WL + + CPVCR  V     +E     G      +++ E R N  ++
Sbjct: 143 NCKHIFHVDCVDTWLTTCSTCPVCRTEVEPRPRLEPEPREGPVGTAPQLLVETRLNLTVE 202

Query: 194 RNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRSNGRI 237
                     +SSSSS + T     S   S +++L+R RS+ RI
Sbjct: 203 A---------ASSSSSDNKTVVSPASRLNSFRKILTRERSSNRI 220

[Close]
BLAST of Cp4.1LG02g11910 vs. NCBI nr
Match: gi|659115017|ref|XP_008457345.1| (PREDICTED: RING-H2 finger protein ATL63 isoform X2 [Cucumis melo])

HSP 1 Score: 341.3 bits (874), Expect = 1.4e-90
Identity = 188/248 (75.81%), Postives = 205/248 (82.66%), Query Frame = 1 

Query: 4   NSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVTV 63
           NSTSL+ F QSIFSYNSN++LAALISLLLVVLFVLLLHAYANCFFP PRHR  +R+SVTV
Sbjct: 5   NSTSLTQFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHR--RRTSVTV 64

Query: 64  SYVLGPPRLSRFESI-PFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICLSE 123
           SYVL PPRLSRF+S+ PFDLG A SKGLD SVISAIPLFVYESEEKKCA  MECVICLSE
Sbjct: 65  SYVLAPPRLSRFDSVVPFDLGSAPSKGLDPSVISAIPLFVYESEEKKCAATMECVICLSE 124

Query: 124 FEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVE--SGGLSGESEIGEE 183
           FEERE+GRRLP C HGFHLECIDMWLNSHANCPVCR PV+ EAV+      SGE EIG E
Sbjct: 125 FEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAAESGEGEIGRE 184

Query: 184 IVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLM-SLGASLKRMLSRNRSNGRIFPS 243
            V           NE Q+GQF+S SSSSSS   PPLM S+GASL R+LSRNRS+GRIFPS
Sbjct: 185 TV-----------NEGQSGQFNSDSSSSSSIDPPPLMSSIGASLIRILSRNRSDGRIFPS 239

Query: 244 SNGDELNV 248
           SNG+EL+V
Sbjct: 245 SNGEELDV 239

[Close]
BLAST of Cp4.1LG02g11910 vs. NCBI nr
Match: gi|659115015|ref|XP_008457344.1| (PREDICTED: RING-H2 finger protein ATL63 isoform X1 [Cucumis melo])

HSP 1 Score: 336.7 bits (862), Expect = 3.5e-89
Identity = 189/258 (73.26%), Postives = 207/258 (80.23%), Query Frame = 1 

Query: 4   NSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVTV 63
           NSTSL+ F QSIFSYNSN++LAALISLLLVVLFVLLLHAYANCFFP PRHR  +R+SVTV
Sbjct: 5   NSTSLTQFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHR--RRTSVTV 64

Query: 64  SYVLGPPRLSRFESI-PFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICLSE 123
           SYVL PPRLSRF+S+ PFDLG A SKGLD SVISAIPLFVYESEEKKCA  MECVICLSE
Sbjct: 65  SYVLAPPRLSRFDSVVPFDLGSAPSKGLDPSVISAIPLFVYESEEKKCAATMECVICLSE 124

Query: 124 FEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVE--SGGLSGESEIGEE 183
           FEERE+GRRLP C HGFHLECIDMWLNSHANCPVCR PV+ EAV+      SGE EIG E
Sbjct: 125 FEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAAESGEGEIGRE 184

Query: 184 IVTEERTNCEIQRNEEQNGQFH---------SSSSSSSSSTDPP--LMSLGASLKRMLSR 243
            V           NE Q+GQF+         SSSSSSSSS DPP  + S+GASL R+LSR
Sbjct: 185 TV-----------NEGQSGQFNSDSSSSSSSSSSSSSSSSIDPPPLMSSIGASLIRILSR 244

Query: 244 NRSNGRIFPSSNGDELNV 248
           NRS+GRIFPSSNG+EL+V
Sbjct: 245 NRSDGRIFPSSNGEELDV 249

[Close]
BLAST of Cp4.1LG02g11910 vs. NCBI nr
Match: gi|449455140|ref|XP_004145311.1| (PREDICTED: RING-H2 finger protein ATL63 [Cucumis sativus])

HSP 1 Score: 326.6 bits (836), Expect = 3.7e-86
Identity = 185/254 (72.83%), Postives = 204/254 (80.31%), Query Frame = 1 

Query: 4   NSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVTV 63
           NSTSL+ F Q+IFSYNSN++LAALISLLLVVLFVLLLHAYANCFFP PRH   +R+SVTV
Sbjct: 5   NSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHH--RRTSVTV 64

Query: 64  SYVLGPPRLSRFESIPFDLGFA--QSKGLDSSVISAIPLFVYESEEKKCATV---MECVI 123
           SYVL PPRLSRF+S+PFDLG A   SKGLD SVISAIPLFVYESEEKKCA     MECVI
Sbjct: 65  SYVLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVI 124

Query: 124 CLSEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGGL--SGESE 183
           CLSEFEERE+GRRLP C HGFHLECIDMWLNSHANCPVCR PV+ EAV+      SGE E
Sbjct: 125 CLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESGEGE 184

Query: 184 IGEEIVTEERTNCEIQRNEEQNGQFHS-SSSSSSSSTDPP--LMSLGASLKRMLSRNRSN 243
           IG E V           NE Q+ QF+S SSSSS+SS DPP  + S+GASL R+LSRNRS+
Sbjct: 185 IGRETV-----------NEGQSVQFNSDSSSSSTSSVDPPPLMSSIGASLIRILSRNRSD 244

Query: 244 GRIFPSSNGDELNV 248
           GRIFPSSNG+EL V
Sbjct: 245 GRIFPSSNGEELGV 245

[Close]
BLAST of Cp4.1LG02g11910 vs. NCBI nr
Match: gi|700210733|gb|KGN65829.1| (hypothetical protein Csa_1G532370 [Cucumis sativus])

HSP 1 Score: 326.6 bits (836), Expect = 3.7e-86
Identity = 185/254 (72.83%), Postives = 204/254 (80.31%), Query Frame = 1 

Query: 4   NSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVTV 63
           NSTSL+ F Q+IFSYNSN++LAALISLLLVVLFVLLLHAYANCFFP PRH   +R+SVTV
Sbjct: 63  NSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHH--RRTSVTV 122

Query: 64  SYVLGPPRLSRFESIPFDLGFA--QSKGLDSSVISAIPLFVYESEEKKCATV---MECVI 123
           SYVL PPRLSRF+S+PFDLG A   SKGLD SVISAIPLFVYESEEKKCA     MECVI
Sbjct: 123 SYVLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVI 182

Query: 124 CLSEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESGGL--SGESE 183
           CLSEFEERE+GRRLP C HGFHLECIDMWLNSHANCPVCR PV+ EAV+      SGE E
Sbjct: 183 CLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESGEGE 242

Query: 184 IGEEIVTEERTNCEIQRNEEQNGQFHS-SSSSSSSSTDPP--LMSLGASLKRMLSRNRSN 243
           IG E V           NE Q+ QF+S SSSSS+SS DPP  + S+GASL R+LSRNRS+
Sbjct: 243 IGRETV-----------NEGQSVQFNSDSSSSSTSSVDPPPLMSSIGASLIRILSRNRSD 302

Query: 244 GRIFPSSNGDELNV 248
           GRIFPSSNG+EL V
Sbjct: 303 GRIFPSSNGEELGV 303

[Close]
BLAST of Cp4.1LG02g11910 vs. NCBI nr
Match: gi|645216474|ref|XP_008221319.1| (PREDICTED: RING-H2 finger protein ATL63 [Prunus mume])

HSP 1 Score: 206.8 bits (525), Expect = 4.2e-50
Identity = 128/263 (48.67%), Postives = 165/263 (62.74%), Query Frame = 1 

Query: 8   LSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSSVTVSYVL 67
           L     +IFSY+ NV+LAAL+SLLLV+LFVLLLH YA  F  +  HR  +RSS+TVS VL
Sbjct: 18  LKQLFATIFSYDGNVLLAALVSLLLVILFVLLLHVYAKWFLAQAHHRR-RRSSMTVSRVL 77

Query: 68  GPPRLSRFESIPFDLGF---AQSKGLDSSVISAIPLFVYESEEKKCAT-------VMECV 127
           GP R   F +   D GF   A SKGLD   ISAIPLFVY++EEKK           MECV
Sbjct: 78  GPNRFQHFHTFTLDPGFSGSASSKGLDLKTISAIPLFVYKTEEKKEERNYENGFLEMECV 137

Query: 128 ICLSEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVAEAVESG---GLSGE 187
           ICLS FE++++GR LP C H FH+ECIDMWL SH NCP+CRAP+V  A   G     + +
Sbjct: 138 ICLSPFEDKDVGRNLPKCGHCFHVECIDMWLGSHMNCPICRAPIVTSADGIGMGIDTTSD 197

Query: 188 SEIGEE------------IVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLMSLGAS 245
             +GEE            +  ++     + R + +     SSSSSSSSS+ P  +++G S
Sbjct: 198 QAVGEEESVAIDVLDSGYVENDDLVRVGVMRTDSEP---TSSSSSSSSSSSP--LTVGCS 257

The following BLAST results are available for this feature:
BLAST of Cp4.1LG02g11910 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATL63_ARATH4.5e-3648.62RING-H2 finger protein ATL63 OS=Arabidopsis thaliana GN=ATL63 PE=2 SV=1[more]
ATL2_ARATH7.5e-2333.50RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2 SV=2[more]
ATL64_ARATH6.4e-2235.63RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2 SV=1[more]
ATL5_ARATH4.6e-2037.16RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=1[more]
ATL41_ARATH6.6e-1933.04E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana GN=ATL41 PE=1 SV=1[more]
BLAST of Cp4.1LG02g11910 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXP0_CUCSA2.6e-8672.83Uncharacterized protein OS=Cucumis sativus GN=Csa_1G532370 PE=4 SV=1[more]
D7SJU6_VITVI2.5e-4948.63Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g06930 PE=4 SV=... [more]
A0A061GXF4_THECC2.3e-4749.80Toxicos en levadura 2, putative OS=Theobroma cacao GN=TCM_042177 PE=4 SV=1[more]
V4SCT6_9ROSI5.8e-4646.77Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029990mg PE=4 SV=1[more]
B9HND1_POPTR1.7e-4551.05Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0009s07800g P... [more]
BLAST of Cp4.1LG02g11910 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G58580.12.6e-3748.62 TOXICOS EN LEVADURA 63[more]
AT3G16720.14.2e-2433.50 TOXICOS EN LEVADURA 2[more]
AT2G47560.13.6e-2335.63 RING/U-box superfamily protein[more]
AT3G62690.12.6e-2137.16 AtL5[more]
AT2G42360.13.7e-2033.04 RING/U-box superfamily protein[more]
BLAST of Cp4.1LG02g11910 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659115017|ref|XP_008457345.1|1.4e-9075.81PREDICTED: RING-H2 finger protein ATL63 isoform X2 [Cucumis melo][more]
gi|659115015|ref|XP_008457344.1|3.5e-8973.26PREDICTED: RING-H2 finger protein ATL63 isoform X1 [Cucumis melo][more]
gi|449455140|ref|XP_004145311.1|3.7e-8672.83PREDICTED: RING-H2 finger protein ATL63 [Cucumis sativus][more]
gi|700210733|gb|KGN65829.1|3.7e-8672.83hypothetical protein Csa_1G532370 [Cucumis sativus][more]
gi|645216474|ref|XP_008221319.1|4.2e-5048.67PREDICTED: RING-H2 finger protein ATL63 [Prunus mume][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009987 cellular process
biological_process GO:0050789 regulation of biological process
biological_process GO:0008150 biological_process
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0012505 endomembrane system
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0005575 cellular_component
cellular_component GO:0044464 cell part
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g11910.1Cp4.1LG02g11910.1mRNA