CsGy1G023570 (gene) Cucumber (Gy14) v2

NameCsGy1G023570
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionRING-H2 finger protein ATL63 isoform X1
LocationChr1 : 22363969 .. 22364706 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACACCCACTAATTCCACTTCACTCACCCAATTCGCTCAAACCATTTTCTCCTACAACAGTAACATCATGCTCGCCGCTCTCATTTCTCTTCTCTTAGTCGTCCTCTTCGTCCTTCTCCTCCACGCTTACGCCAATTGCTTCTTCCCTCACCCTCGCCACCACCGCCGTACCTCTGTCACCGTCTCCTACGTCCTTGCTCCCCCTCGTCTCTCGCGTTTCGATTCCGTTCCCTTTGATTTAGGTTCCGCTCCGTCCAACTCCAAAGGCCTGGATCCGTCTGTTATCTCTGCCATTCCTCTGTTCGTCTACGAATCTGAGGAGAAGAAATGTGCGGCGGCGGCAGCGGCGATGGAGTGCGTGATTTGCCTCAGTGAATTCGAAGAACGAGAACTTGGACGACGGCTGCCCAAATGTAGGCATGGGTTTCATCTGGAGTGTATTGATATGTGGTTGAATTCTCACGCGAATTGTCCTGTTTGTAGAGAGCCGGTGATTGGCGAGGCTGTTGATTGTTCCGATGCGGTGGAATCAGGCGAGGGAGAAATCGGAAGGGAGACTGTGAATGAGGGGCAAAGCGTTCAATTTAACTCTGATTCCTCCTCCTCTTCTACTTCTTCGGTTGACCCACCGCCATTGATGTCGTCGATTGGAGCGTCATTGATTCGAATATTGAGTAGAAACAGATCAGACGGAAGGATTTTCCCGTCCTCCAATGGCGAAGAATTGGGTGTTTGA

mRNA sequence

ATGACACCCACTAATTCCACTTCACTCACCCAATTCGCTCAAACCATTTTCTCCTACAACAGTAACATCATGCTCGCCGCTCTCATTTCTCTTCTCTTAGTCGTCCTCTTCGTCCTTCTCCTCCACGCTTACGCCAATTGCTTCTTCCCTCACCCTCGCCACCACCGCCGTACCTCTGTCACCGTCTCCTACGTCCTTGCTCCCCCTCGTCTCTCGCGTTTCGATTCCGTTCCCTTTGATTTAGGTTCCGCTCCGTCCAACTCCAAAGGCCTGGATCCGTCTGTTATCTCTGCCATTCCTCTGTTCGTCTACGAATCTGAGGAGAAGAAATGTGCGGCGGCGGCAGCGGCGATGGAGTGCGTGATTTGCCTCAGTGAATTCGAAGAACGAGAACTTGGACGACGGCTGCCCAAATGTAGGCATGGGTTTCATCTGGAGTGTATTGATATGTGGTTGAATTCTCACGCGAATTGTCCTGTTTGTAGAGAGCCGGTGATTGGCGAGGCTGTTGATTGTTCCGATGCGGTGGAATCAGGCGAGGGAGAAATCGGAAGGGAGACTGTGAATGAGGGGCAAAGCGTTCAATTTAACTCTGATTCCTCCTCCTCTTCTACTTCTTCGGTTGACCCACCGCCATTGATGTCGTCGATTGGAGCGTCATTGATTCGAATATTGAGTAGAAACAGATCAGACGGAAGGATTTTCCCGTCCTCCAATGGCGAAGAATTGGGTGTTTGA

Coding sequence (CDS)

ATGACACCCACTAATTCCACTTCACTCACCCAATTCGCTCAAACCATTTTCTCCTACAACAGTAACATCATGCTCGCCGCTCTCATTTCTCTTCTCTTAGTCGTCCTCTTCGTCCTTCTCCTCCACGCTTACGCCAATTGCTTCTTCCCTCACCCTCGCCACCACCGCCGTACCTCTGTCACCGTCTCCTACGTCCTTGCTCCCCCTCGTCTCTCGCGTTTCGATTCCGTTCCCTTTGATTTAGGTTCCGCTCCGTCCAACTCCAAAGGCCTGGATCCGTCTGTTATCTCTGCCATTCCTCTGTTCGTCTACGAATCTGAGGAGAAGAAATGTGCGGCGGCGGCAGCGGCGATGGAGTGCGTGATTTGCCTCAGTGAATTCGAAGAACGAGAACTTGGACGACGGCTGCCCAAATGTAGGCATGGGTTTCATCTGGAGTGTATTGATATGTGGTTGAATTCTCACGCGAATTGTCCTGTTTGTAGAGAGCCGGTGATTGGCGAGGCTGTTGATTGTTCCGATGCGGTGGAATCAGGCGAGGGAGAAATCGGAAGGGAGACTGTGAATGAGGGGCAAAGCGTTCAATTTAACTCTGATTCCTCCTCCTCTTCTACTTCTTCGGTTGACCCACCGCCATTGATGTCGTCGATTGGAGCGTCATTGATTCGAATATTGAGTAGAAACAGATCAGACGGAAGGATTTTCCCGTCCTCCAATGGCGAAGAATTGGGTGTTTGA

Protein sequence

MTPTNSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSVTVSYVLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESGEGEIGRETVNEGQSVQFNSDSSSSSTSSVDPPPLMSSIGASLIRILSRNRSDGRIFPSSNGEELGV
BLAST of CsGy1G023570 vs. NCBI nr
Match: XP_004145311.1 (PREDICTED: RING-H2 finger protein ATL63 [Cucumis sativus])

HSP 1 Score: 453.8 bits (1166), Expect = 3.8e-124
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0

Query: 1   MTPTNSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSV 60
           MTPTNSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSV
Sbjct: 1   MTPTNSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSV 60

Query: 61  TVSYVLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMEC 120
           TVSYVLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMEC
Sbjct: 61  TVSYVLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMEC 120

Query: 121 VICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESGE 180
           VICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESGE
Sbjct: 121 VICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESGE 180

Query: 181 GEIGRETVNEGQSVQFNSDXXXXXXXXXXXXXLMSSIGASLIRILSRNRSDGRIFPSSNG 240
           GEIGRETVNEGQSVQFNSDXXXXXXXXXXXXXLMSSIGASLIRILSRNRSDGRIFPSSNG
Sbjct: 181 GEIGRETVNEGQSVQFNSDXXXXXXXXXXXXXLMSSIGASLIRILSRNRSDGRIFPSSNG 240

Query: 241 EELGV 246
           EELGV
Sbjct: 241 EELGV 245

BLAST of CsGy1G023570 vs. NCBI nr
Match: KGN65829.1 (hypothetical protein Csa_1G532370 [Cucumis sativus])

HSP 1 Score: 453.8 bits (1166), Expect = 3.8e-124
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0

Query: 1   MTPTNSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSV 60
           MTPTNSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSV
Sbjct: 59  MTPTNSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSV 118

Query: 61  TVSYVLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMEC 120
           TVSYVLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMEC
Sbjct: 119 TVSYVLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMEC 178

Query: 121 VICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESGE 180
           VICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESGE
Sbjct: 179 VICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESGE 238

Query: 181 GEIGRETVNEGQSVQFNSDXXXXXXXXXXXXXLMSSIGASLIRILSRNRSDGRIFPSSNG 240
           GEIGRETVNEGQSVQFNSDXXXXXXXXXXXXXLMSSIGASLIRILSRNRSDGRIFPSSNG
Sbjct: 239 GEIGRETVNEGQSVQFNSDXXXXXXXXXXXXXLMSSIGASLIRILSRNRSDGRIFPSSNG 298

Query: 241 EELGV 246
           EELGV
Sbjct: 299 EELGV 303

BLAST of CsGy1G023570 vs. NCBI nr
Match: XP_008457345.1 (PREDICTED: RING-H2 finger protein ATL63 isoform X1 [Cucumis melo] >XP_008457346.1 PREDICTED: RING-H2 finger protein ATL63 isoform X2 [Cucumis melo] >XP_008457348.1 PREDICTED: RING-H2 finger protein ATL63 isoform X3 [Cucumis melo])

HSP 1 Score: 408.7 bits (1049), Expect = 1.4e-110
Identity = 226/246 (91.87%), Postives = 228/246 (92.68%), Query Frame = 0

Query: 1   MTPTNSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSV 60
           MT +NSTSLTQFAQ+IFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRH RRTSV
Sbjct: 1   MTSSNSTSLTQFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHRRRTSV 60

Query: 61  TVSYVLAPPRLSRFDS-VPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAME 120
           TVSYVLAPPRLSRFDS VPFDLGSAP  SKGLDPSVISAIPLFVYESEEKKC   AA ME
Sbjct: 61  TVSYVLAPPRLSRFDSVVPFDLGSAP--SKGLDPSVISAIPLFVYESEEKKC---AATME 120

Query: 121 CVICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESG 180
           CVICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDA ESG
Sbjct: 121 CVICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAAESG 180

Query: 181 EGEIGRETVNEGQSVQFNSDXXXXXXXXXXXXXLMSSIGASLIRILSRNRSDGRIFPSSN 240
           EGEIGRETVNEGQS QFNSD   XXXXXXX   LMSSIGASLIRILSRNRSDGRIFPSSN
Sbjct: 181 EGEIGRETVNEGQSGQFNSD--SXXXXXXXPPPLMSSIGASLIRILSRNRSDGRIFPSSN 239

Query: 241 GEELGV 246
           GEEL V
Sbjct: 241 GEELDV 239

BLAST of CsGy1G023570 vs. NCBI nr
Match: XP_008457344.1 (PREDICTED: RING-H2 finger protein ATL63 isoform X4 [Cucumis melo])

HSP 1 Score: 398.7 bits (1023), Expect = 1.5e-107
Identity = 229/254 (90.16%), Postives = 231/254 (90.94%), Query Frame = 0

Query: 1   MTPTNSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSV 60
           MT +NSTSLTQFAQ+IFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRH RRTSV
Sbjct: 1   MTSSNSTSLTQFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHRRRTSV 60

Query: 61  TVSYVLAPPRLSRFDS-VPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAME 120
           TVSYVLAPPRLSRFDS VPFDLGSAP  SKGLDPSVISAIPLFVYESEEKKC   AA ME
Sbjct: 61  TVSYVLAPPRLSRFDSVVPFDLGSAP--SKGLDPSVISAIPLFVYESEEKKC---AATME 120

Query: 121 CVICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESG 180
           CVICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDA ESG
Sbjct: 121 CVICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAAESG 180

Query: 181 EGEIGRETVNEGQSVQFNS--------DXXXXXXXXXXXXXLMSSIGASLIRILSRNRSD 240
           EGEIGRETVNEGQS QFNS         XXXXXXXXXXXXX  SSIGASLIRILSRNRSD
Sbjct: 181 EGEIGRETVNEGQSGQFNSXXXXXXXXXXXXXXXXXXXXXXXXSSIGASLIRILSRNRSD 240

Query: 241 GRIFPSSNGEELGV 246
           GRIFPSSNGEEL V
Sbjct: 241 GRIFPSSNGEELDV 249

BLAST of CsGy1G023570 vs. NCBI nr
Match: XP_023519269.1 (RING-H2 finger protein ATL63-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 339.0 bits (868), Expect = 1.4e-89
Identity = 204/266 (76.69%), Postives = 217/266 (81.58%), Query Frame = 0

Query: 5   NSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSVTVSY 64
           NSTSL  FAQ++FSYNSNIMLAALISLLLVVLFVLLLHAYANCFFP PR HRRTSVTVSY
Sbjct: 4   NSTSLIGFAQSVFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPR-HRRTSVTVSY 63

Query: 65  VLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVICL 124
           VL PPRLSRFDSVPFD G+AP  SKGLDPSVISAIPLFVYESEEKKC   AA MECVICL
Sbjct: 64  VLGPPRLSRFDSVPFDSGAAP--SKGLDPSVISAIPLFVYESEEKKC---AAVMECVICL 123

Query: 125 SEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVE----SGE 184
           SEFEERELGRRLPKC HGFHLECIDMWLNSHA+CPVCR PV+G+A DCSDAVE    SGE
Sbjct: 124 SEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDATDCSDAVESGRLSGE 183

Query: 185 GEIGRETV-----------NEGQSVQFNSDXXXXXXXXXXXXXL----------MSSIGA 244
            EIG E V           NEGQ+ QF+S XXXXXXXXXXXXX           + S+GA
Sbjct: 184 REIGGEIVTEERRNCEIQRNEGQNGQFHSXXXXXXXXXXXXXXXXXXXXXXXQPLMSLGA 243

Query: 245 SLIRILSRNRSDGRIFPSSNGEELGV 246
           SL R+LSRNRSDGRIFPSS+G+EL V
Sbjct: 244 SLKRMLSRNRSDGRIFPSSDGDELDV 263

BLAST of CsGy1G023570 vs. TAIR10
Match: AT3G62690.1 (AtL5)

HSP 1 Score: 104.8 bits (260), Expect = 7.9e-23
Identity = 60/149 (40.27%), Postives = 85/149 (57.05%), Query Frame = 0

Query: 17  FSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSVTVSYVLAPPRLSRFDS 76
           +S N  IMLA++I L + V+ +L  H+YA   F   R +RR    +S  L     +R   
Sbjct: 22  YSLNGKIMLASVIILFVAVILILCFHSYARWLF--RRQNRRIRRRISAHLRSLAAAR--- 81

Query: 77  VPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVICLSEFEERELGRRL 136
              D   + S+   LDP+V+  IP+FVY  +  +    +   EC +CLSEFEE + GR L
Sbjct: 82  ---DPTQSSSSLSPLDPTVLEKIPIFVYSVKTHE----SPLEECSVCLSEFEEDDEGRVL 141

Query: 137 PKCRHGFHLECIDMWLNSHANCPVCREPV 166
           PKC H FH++CID W  S ++CP+CR PV
Sbjct: 142 PKCGHVFHVDCIDTWFRSRSSCPLCRAPV 158

BLAST of CsGy1G023570 vs. TAIR10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2)

HSP 1 Score: 99.0 bits (245), Expect = 4.3e-21
Identity = 43/92 (46.74%), Postives = 60/92 (65.22%), Query Frame = 0

Query: 74  FDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVICLSEFEERELG 133
           F + P    ++   S+GLDP+VI ++P+F +  E  K       +EC +CLSEFEE E G
Sbjct: 78  FTADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHK-----DPIECAVCLSEFEESETG 137

Query: 134 RRLPKCRHGFHLECIDMWLNSHANCPVCREPV 166
           R LP C+H FH++CIDMW +SH+ CP+CR  V
Sbjct: 138 RVLPNCQHTFHVDCIDMWFHSHSTCPLCRSLV 164

BLAST of CsGy1G023570 vs. TAIR10
Match: AT2G47560.1 (RING/U-box superfamily protein)

HSP 1 Score: 96.3 bits (238), Expect = 2.8e-20
Identity = 55/149 (36.91%), Postives = 74/149 (49.66%), Query Frame = 0

Query: 17  FSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSVTVSYVLAPPRLSRFDS 76
           ++ N  IML+++I L + V+ +L  H+YA   F   R H R                   
Sbjct: 22  YALNGKIMLSSVIVLFVAVIMILCFHSYARWLF---RRHNRXXXXXXXXXXXTL------ 81

Query: 77  VPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVICLSEFEERELGRRL 136
                 SA    + LD +V+  IP+FVY S  K          C +CLSEFEE + GR L
Sbjct: 82  ------SASPRDQALDQAVLDKIPIFVYSS--KXXXXXXXXXXCSVCLSEFEEEDEGRLL 141

Query: 137 PKCRHGFHLECIDMWLNSHANCPVCREPV 166
           PKC H FH++CID W  S + CP+CR PV
Sbjct: 142 PKCGHSFHVDCIDTWFRSRSTCPLCRAPV 153

BLAST of CsGy1G023570 vs. TAIR10
Match: AT4G15975.1 (RING/U-box superfamily protein)

HSP 1 Score: 94.4 bits (233), Expect = 1.1e-19
Identity = 45/116 (38.79%), Postives = 66/116 (56.90%), Query Frame = 0

Query: 64  YVLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVIC 123
           Y+L     +R  +         S   GL+PS+I ++P+F + +       A  AMEC +C
Sbjct: 25  YLLRSSPFNRTTAASTFFTDPSSTPGGLNPSIIKSLPIFTFSA-----VTALFAMECSVC 84

Query: 124 LSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCR---EPVIGEAVDCSDAV 177
           LSEF++ E GR +P C+H FH++CIDMW +SH++CP+CR   EP  G      D V
Sbjct: 85  LSEFKDNESGRVMPNCKHTFHVDCIDMWFHSHSSCPLCRSLIEPFAGGVKSTMDEV 135

BLAST of CsGy1G023570 vs. TAIR10
Match: AT5G58580.1 (TOXICOS EN LEVADURA 63)

HSP 1 Score: 93.6 bits (231), Expect = 1.8e-19
Identity = 46/97 (47.42%), Postives = 57/97 (58.76%), Query Frame = 0

Query: 75  DSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVICLSEFEERELGR 134
           D V     +A  + KGLD SVIS+IPLFVY                VICL  +E  + GR
Sbjct: 96  DGVSSPAATATRDDKGLDSSVISSIPLFVY---XXXXXXXXXXXXXVICLGLWEAGDFGR 155

Query: 135 RLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVD 172
           +L  C HGFH+ECIDMWL+SH+ CP+CR PV+    D
Sbjct: 156 KLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSD 189

BLAST of CsGy1G023570 vs. Swiss-Prot
Match: sp|Q9LZJ6|ATL5_ARATH (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.4e-21
Identity = 60/149 (40.27%), Postives = 85/149 (57.05%), Query Frame = 0

Query: 17  FSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSVTVSYVLAPPRLSRFDS 76
           +S N  IMLA++I L + V+ +L  H+YA   F   R +RR    +S  L     +R   
Sbjct: 22  YSLNGKIMLASVIILFVAVILILCFHSYARWLF--RRQNRRIRRRISAHLRSLAAAR--- 81

Query: 77  VPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVICLSEFEERELGRRL 136
              D   + S+   LDP+V+  IP+FVY  +  +    +   EC +CLSEFEE + GR L
Sbjct: 82  ---DPTQSSSSLSPLDPTVLEKIPIFVYSVKTHE----SPLEECSVCLSEFEEDDEGRVL 141

Query: 137 PKCRHGFHLECIDMWLNSHANCPVCREPV 166
           PKC H FH++CID W  S ++CP+CR PV
Sbjct: 142 PKCGHVFHVDCIDTWFRSRSSCPLCRAPV 158

BLAST of CsGy1G023570 vs. Swiss-Prot
Match: sp|Q8L9T5|ATL2_ARATH (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 99.0 bits (245), Expect = 7.8e-20
Identity = 43/92 (46.74%), Postives = 60/92 (65.22%), Query Frame = 0

Query: 74  FDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVICLSEFEERELG 133
           F + P    ++   S+GLDP+VI ++P+F +  E  K       +EC +CLSEFEE E G
Sbjct: 78  FTADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHK-----DPIECAVCLSEFEESETG 137

Query: 134 RRLPKCRHGFHLECIDMWLNSHANCPVCREPV 166
           R LP C+H FH++CIDMW +SH+ CP+CR  V
Sbjct: 138 RVLPNCQHTFHVDCIDMWFHSHSTCPLCRSLV 164

BLAST of CsGy1G023570 vs. Swiss-Prot
Match: sp|O22255|ATL64_ARATH (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 5.1e-19
Identity = 55/149 (36.91%), Postives = 74/149 (49.66%), Query Frame = 0

Query: 17  FSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSVTVSYVLAPPRLSRFDS 76
           ++ N  IML+++I L + V+ +L  H+YA   F   R H R                   
Sbjct: 22  YALNGKIMLSSVIVLFVAVIMILCFHSYARWLF---RRHNRXXXXXXXXXXXTL------ 81

Query: 77  VPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVICLSEFEERELGRRL 136
                 SA    + LD +V+  IP+FVY S  K          C +CLSEFEE + GR L
Sbjct: 82  ------SASPRDQALDQAVLDKIPIFVYSS--KXXXXXXXXXXCSVCLSEFEEEDEGRLL 141

Query: 137 PKCRHGFHLECIDMWLNSHANCPVCREPV 166
           PKC H FH++CID W  S + CP+CR PV
Sbjct: 142 PKCGHSFHVDCIDTWFRSRSTCPLCRAPV 153

BLAST of CsGy1G023570 vs. Swiss-Prot
Match: sp|Q8LF65|ATL17_ARATH (RING-H2 finger protein ATL17 OS=Arabidopsis thaliana OX=3702 GN=ATL17 PE=2 SV=2)

HSP 1 Score: 93.6 bits (231), Expect = 3.3e-18
Identity = 45/116 (38.79%), Postives = 65/116 (56.03%), Query Frame = 0

Query: 64  YVLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVIC 123
           Y+L     +R  +         S   GL+PS+I ++P+F + +       A  AMEC +C
Sbjct: 25  YLLRSSPFNRTTAASTFFTDPSSTPGGLNPSIIKSLPIFTFSA-----VTALFAMECSVC 84

Query: 124 LSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCR---EPVIGEAVDCSDAV 177
           LSEF++ E GR +P C+H FH+ CIDMW +SH++CP+CR   EP  G      D V
Sbjct: 85  LSEFKDNESGRVMPNCKHTFHVHCIDMWFHSHSSCPLCRSQIEPFAGGVKSSMDEV 135

BLAST of CsGy1G023570 vs. Swiss-Prot
Match: sp|Q9LUZ9|ATL63_ARATH (RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.3e-18
Identity = 46/97 (47.42%), Postives = 57/97 (58.76%), Query Frame = 0

Query: 75  DSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVICLSEFEERELGR 134
           D V     +A  + KGLD SVIS+IPLFVY                VICL  +E  + GR
Sbjct: 96  DGVSSPAATATRDDKGLDSSVISSIPLFVY---XXXXXXXXXXXXXVICLGLWEAGDFGR 155

Query: 135 RLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVD 172
           +L  C HGFH+ECIDMWL+SH+ CP+CR PV+    D
Sbjct: 156 KLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSD 189

BLAST of CsGy1G023570 vs. TrEMBL
Match: tr|A0A0A0LXP0|A0A0A0LXP0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532370 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 2.5e-124
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0

Query: 1   MTPTNSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSV 60
           MTPTNSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSV
Sbjct: 59  MTPTNSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSV 118

Query: 61  TVSYVLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMEC 120
           TVSYVLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMEC
Sbjct: 119 TVSYVLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMEC 178

Query: 121 VICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESGE 180
           VICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESGE
Sbjct: 179 VICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESGE 238

Query: 181 GEIGRETVNEGQSVQFNSDXXXXXXXXXXXXXLMSSIGASLIRILSRNRSDGRIFPSSNG 240
           GEIGRETVNEGQSVQFNSDXXXXXXXXXXXXXLMSSIGASLIRILSRNRSDGRIFPSSNG
Sbjct: 239 GEIGRETVNEGQSVQFNSDXXXXXXXXXXXXXLMSSIGASLIRILSRNRSDGRIFPSSNG 298

Query: 241 EELGV 246
           EELGV
Sbjct: 299 EELGV 303

BLAST of CsGy1G023570 vs. TrEMBL
Match: tr|A0A1S3C6K6|A0A1S3C6K6_CUCME (RING-H2 finger protein ATL63 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497058 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 9.4e-111
Identity = 226/246 (91.87%), Postives = 228/246 (92.68%), Query Frame = 0

Query: 1   MTPTNSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSV 60
           MT +NSTSLTQFAQ+IFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRH RRTSV
Sbjct: 1   MTSSNSTSLTQFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHRRRTSV 60

Query: 61  TVSYVLAPPRLSRFDS-VPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAME 120
           TVSYVLAPPRLSRFDS VPFDLGSAP  SKGLDPSVISAIPLFVYESEEKKC   AA ME
Sbjct: 61  TVSYVLAPPRLSRFDSVVPFDLGSAP--SKGLDPSVISAIPLFVYESEEKKC---AATME 120

Query: 121 CVICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESG 180
           CVICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDA ESG
Sbjct: 121 CVICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAAESG 180

Query: 181 EGEIGRETVNEGQSVQFNSDXXXXXXXXXXXXXLMSSIGASLIRILSRNRSDGRIFPSSN 240
           EGEIGRETVNEGQS QFNSD   XXXXXXX   LMSSIGASLIRILSRNRSDGRIFPSSN
Sbjct: 181 EGEIGRETVNEGQSGQFNSD--SXXXXXXXPPPLMSSIGASLIRILSRNRSDGRIFPSSN 239

Query: 241 GEELGV 246
           GEEL V
Sbjct: 241 GEELDV 239

BLAST of CsGy1G023570 vs. TrEMBL
Match: tr|A0A1S3C4V4|A0A1S3C4V4_CUCME (RING-H2 finger protein ATL63 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103497058 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 9.7e-108
Identity = 229/254 (90.16%), Postives = 231/254 (90.94%), Query Frame = 0

Query: 1   MTPTNSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSV 60
           MT +NSTSLTQFAQ+IFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRH RRTSV
Sbjct: 1   MTSSNSTSLTQFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHRRRTSV 60

Query: 61  TVSYVLAPPRLSRFDS-VPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAME 120
           TVSYVLAPPRLSRFDS VPFDLGSAP  SKGLDPSVISAIPLFVYESEEKKC   AA ME
Sbjct: 61  TVSYVLAPPRLSRFDSVVPFDLGSAP--SKGLDPSVISAIPLFVYESEEKKC---AATME 120

Query: 121 CVICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESG 180
           CVICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDA ESG
Sbjct: 121 CVICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAAESG 180

Query: 181 EGEIGRETVNEGQSVQFNS--------DXXXXXXXXXXXXXLMSSIGASLIRILSRNRSD 240
           EGEIGRETVNEGQS QFNS         XXXXXXXXXXXXX  SSIGASLIRILSRNRSD
Sbjct: 181 EGEIGRETVNEGQSGQFNSXXXXXXXXXXXXXXXXXXXXXXXXSSIGASLIRILSRNRSD 240

Query: 241 GRIFPSSNGEELGV 246
           GRIFPSSNGEEL V
Sbjct: 241 GRIFPSSNGEELDV 249

BLAST of CsGy1G023570 vs. TrEMBL
Match: tr|A0A2R6P6C5|A0A2R6P6C5_ACTCH (RING-H2 finger protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc31825 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.4e-50
Identity = 124/251 (49.40%), Postives = 162/251 (64.54%), Query Frame = 0

Query: 5   NSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSVTVSY 64
           +S S++    TIFSYN N++LAA++SLLLV+LFVLLLH YA  F    RH RR SV+VS+
Sbjct: 7   SSNSVSNLLHTIFSYNGNVLLAAIVSLLLVILFVLLLHVYAKWFLSQARHRRRRSVSVSH 66

Query: 65  VLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVICL 124
           VL P R   F+++ FD   + S +KGL+ S I++IPLF+YES   K       +ECVICL
Sbjct: 67  VLGPSRFHHFNTLSFDTAFSGSPTKGLEASAIASIPLFLYESHHHK-----NGLECVICL 126

Query: 125 SEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVI------GEAVD------C 184
           S FEE ELGR LPKC HGFH ECIDMW  SH++CP+CR P++      GE +D       
Sbjct: 127 SVFEEGELGRLLPKCGHGFHSECIDMWFRSHSSCPICRGPIVPAGESKGEEIDLVSNNVI 186

Query: 185 SDAV-ESGEGEIGRETVNEGQSVQFNSDXXXXXXXXXXXXXLMSSIGASLIRILSRNRSD 243
            D++ E    EI  E  N  ++V   SD      XXXXXX   +++G SL R+LSR+RS+
Sbjct: 187 VDSINEEPALEIVVEVPNSDENVVVTSDSLSACSXXXXXXSQAATLGGSLKRMLSRDRSE 246

BLAST of CsGy1G023570 vs. TrEMBL
Match: tr|A0A2R6QJC0|A0A2R6QJC0_ACTCH (RING-H2 finger protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc16527 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 7.8e-49
Identity = 119/252 (47.22%), Postives = 160/252 (63.49%), Query Frame = 0

Query: 5   NSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSVTVSY 64
           +S +++ F  TIFSYN NI+LAA++SLLLV+LFVLLLH Y   F    RH RR SV+VS+
Sbjct: 11  SSDAVSSFLHTIFSYNGNILLAAIVSLLLVILFVLLLHVYVKWFLSQARHRRRRSVSVSH 70

Query: 65  VLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVICL 124
           VL P R   F+++ FD   + S +KGL+ S I +IPLFVYES   K       +ECVICL
Sbjct: 71  VLGPARFHHFNTLAFDTAFSSSPTKGLEASAIDSIPLFVYESYHHK-----NGLECVICL 130

Query: 125 SEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVESGEGEIG 184
           S FEE E+GR LPKC HGFH ECIDMWL SH++CP+CR PV+       + ++     + 
Sbjct: 131 SLFEEGEVGRLLPKCGHGFHSECIDMWLRSHSSCPICRGPVVPVGKSNGEEIDLVSNNVI 190

Query: 185 RETVNEGQSVQF--------------NSDXXXXXXXXXXXXXLMSSIGASLIRILSRNRS 243
            +++NE  +++                SD     XXXXXXX   +++G SL R+LSR+RS
Sbjct: 191 LDSINEEPALEIVVEVPNSDENEVVVISDSLSACXXXXXXXSQAATLGGSLKRMLSRDRS 250

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004145311.13.8e-124100.00PREDICTED: RING-H2 finger protein ATL63 [Cucumis sativus][more]
KGN65829.13.8e-124100.00hypothetical protein Csa_1G532370 [Cucumis sativus][more]
XP_008457345.11.4e-11091.87PREDICTED: RING-H2 finger protein ATL63 isoform X1 [Cucumis melo] >XP_008457346.... [more]
XP_008457344.11.5e-10790.16PREDICTED: RING-H2 finger protein ATL63 isoform X4 [Cucumis melo][more]
XP_023519269.11.4e-8976.69RING-H2 finger protein ATL63-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT3G62690.17.9e-2340.27AtL5[more]
AT3G16720.14.3e-2146.74TOXICOS EN LEVADURA 2[more]
AT2G47560.12.8e-2036.91RING/U-box superfamily protein[more]
AT4G15975.11.1e-1938.79RING/U-box superfamily protein[more]
AT5G58580.11.8e-1947.42TOXICOS EN LEVADURA 63[more]
Match NameE-valueIdentityDescription
sp|Q9LZJ6|ATL5_ARATH1.4e-2140.27RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1[more]
sp|Q8L9T5|ATL2_ARATH7.8e-2046.74RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2[more]
sp|O22255|ATL64_ARATH5.1e-1936.91RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1[more]
sp|Q8LF65|ATL17_ARATH3.3e-1838.79RING-H2 finger protein ATL17 OS=Arabidopsis thaliana OX=3702 GN=ATL17 PE=2 SV=2[more]
sp|Q9LUZ9|ATL63_ARATH3.3e-1847.42RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
tr|A0A0A0LXP0|A0A0A0LXP0_CUCSA2.5e-124100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532370 PE=4 SV=1[more]
tr|A0A1S3C6K6|A0A1S3C6K6_CUCME9.4e-11191.87RING-H2 finger protein ATL63 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497058 ... [more]
tr|A0A1S3C4V4|A0A1S3C4V4_CUCME9.7e-10890.16RING-H2 finger protein ATL63 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103497058 ... [more]
tr|A0A2R6P6C5|A0A2R6P6C5_ACTCH2.4e-5049.40RING-H2 finger protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00... [more]
tr|A0A2R6QJC0|A0A2R6QJC0_ACTCH7.8e-4947.22RING-H2 finger protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G023570.1CsGy1G023570.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 120..161
e-value: 8.7E-7
score: 38.6
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 119..162
e-value: 6.4E-12
score: 45.5
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 120..162
score: 12.43
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 81..166
e-value: 3.2E-20
score: 73.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..213
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 22..212
NoneNo IPR availablePANTHERPTHR14155:SF417SUBFAMILY NOT NAMEDcoord: 22..212
NoneNo IPR availableCDDcd16461RING-H2_EL5_likecoord: 119..162
e-value: 2.13085E-17
score: 72.3427
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 119..166

The following gene(s) are paralogous to this gene:

None