Csa5G021310 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCTGAATAGCTTCCACCTTATCTGCAATGGTCAAAATTCCTCCACATTTTCCTTTCAACTTTCATCCAACAAAACACATAATTCAAAACCAAAAATGGCAACAAACTTCCACAAAACCCCAATCCTTCACTCAATTTCTCTTACAAATCTCTTCCCAATACTTCCCAGCAATCCAAAACCATCTCTCACCAACACCCCTTTCTCTTTCCCATTAATCCATAAATCACCCAATTTCAAAACTTGTCTCCCTCGCCCTGGCCCCAATCGTTGCGCTGCTCGGCGGAGAGTTCGTTACGACGACGACGACGAAGATGAAGATGAAGATTACGGCCACAACCATCAGATTGCACTGTTGGAATCCTACACTCAGGCCGCCACAGGAGAAGCACTCATCGTTCATGCCATGGTTGACGGTGACCATGTTGAAGTTCTTGTCTTCAAGGTTTTTCCTCTTTTCTGTTCAGAGATTTATTGTTTTGGTTAAATAATTAGAATATAATTTTTAGTAATGTTTAGTAGATAAAGAAGAAGAAGAGTTGTTAAAAACTGAAAAAGAATATAAACGGAGTAGAAAATGTGTGGAATGATTAATATTATATTTGTAGGGATTCTCATCAAGTTTGAGCTATGGGACATCACCTGATCCATCAAGAAGTGTTCTTCCCGAAAGAGCAATCATTAAATTCATTGATAGAATCAAAGGCCCATTTGATCCATCAAATATCCAATACATTCAGAAGGGTATCACTTGGAATTCATTTAACTTCCTCAATTAA ATGGCAACAAACTTCCACAAAACCCCAATCCTTCACTCAATTTCTCTTACAAATCTCTTCCCAATACTTCCCAGCAATCCAAAACCATCTCTCACCAACACCCCTTTCTCTTTCCCATTAATCCATAAATCACCCAATTTCAAAACTTGTCTCCCTCGCCCTGGCCCCAATCGTTGCGCTGCTCGGCGGAGAGTTCGTTACGACGACGACGACGAAGATGAAGATGAAGATTACGGCCACAACCATCAGATTGCACTGTTGGAATCCTACACTCAGGCCGCCACAGGAGAAGCACTCATCGTTCATGCCATGGTTGACGGTGACCATGTTGAAGTTCTTGTCTTCAAGGGATTCTCATCAAGTTTGAGCTATGGGACATCACCTGATCCATCAAGAAGTGTTCTTCCCGAAAGAGCAATCATTAAATTCATTGATAGAATCAAAGGCCCATTTGATCCATCAAATATCCAATACATTCAGAAGGGTATCACTTGGAATTCATTTAACTTCCTCAATTAA ATGGCAACAAACTTCCACAAAACCCCAATCCTTCACTCAATTTCTCTTACAAATCTCTTCCCAATACTTCCCAGCAATCCAAAACCATCTCTCACCAACACCCCTTTCTCTTTCCCATTAATCCATAAATCACCCAATTTCAAAACTTGTCTCCCTCGCCCTGGCCCCAATCGTTGCGCTGCTCGGCGGAGAGTTCGTTACGACGACGACGACGAAGATGAAGATGAAGATTACGGCCACAACCATCAGATTGCACTGTTGGAATCCTACACTCAGGCCGCCACAGGAGAAGCACTCATCGTTCATGCCATGGTTGACGGTGACCATGTTGAAGTTCTTGTCTTCAAGGGATTCTCATCAAGTTTGAGCTATGGGACATCACCTGATCCATCAAGAAGTGTTCTTCCCGAAAGAGCAATCATTAAATTCATTGATAGAATCAAAGGCCCATTTGATCCATCAAATATCCAATACATTCAGAAGGGTATCACTTGGAATTCATTTAACTTCCTCAATTAA MATNFHKTPILHSISLTNLFPILPSNPKPSLTNTPFSFPLIHKSPNFKTCLPRPGPNRCAARRRVRYDDDDEDEDEDYGHNHQIALLESYTQAATGEALIVHAMVDGDHVEVLVFKGFSSSLSYGTSPDPSRSVLPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNFLN*
BLAST of Csa5G021310 vs. TrEMBL
Match: A0A0A0KJ82_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G021310 PE=4 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 3.3e-96 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 1
BLAST of Csa5G021310 vs. TrEMBL
Match: B9T4M8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0053580 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 9.6e-40 Identity = 89/150 (59.33%), Postives = 113/150 (75.33%), Query Frame = 1
BLAST of Csa5G021310 vs. TrEMBL
Match: D7T8K4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05820 PE=4 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 1.6e-39 Identity = 77/111 (69.37%), Postives = 98/111 (88.29%), Query Frame = 1
BLAST of Csa5G021310 vs. TrEMBL
Match: B9HJH1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s13480g PE=4 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 2.4e-38 Identity = 80/113 (70.80%), Postives = 99/113 (87.61%), Query Frame = 1
BLAST of Csa5G021310 vs. TrEMBL
Match: A0A072VF21_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_1g032560 PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 3.1e-38 Identity = 74/110 (67.27%), Postives = 94/110 (85.45%), Query Frame = 1
BLAST of Csa5G021310 vs. TAIR10
Match: AT2G01755.1 (AT2G01755.1 unknown protein) HSP 1 Score: 132.5 bits (332), Expect = 2.5e-31 Identity = 65/110 (59.09%), Postives = 83/110 (75.45%), Query Frame = 1
BLAST of Csa5G021310 vs. NCBI nr
Match: gi|778698045|ref|XP_004142303.2| (PREDICTED: uncharacterized protein LOC101213440 [Cucumis sativus]) HSP 1 Score: 359.0 bits (920), Expect = 4.7e-96 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 1
BLAST of Csa5G021310 vs. NCBI nr
Match: gi|659102980|ref|XP_008452414.1| (PREDICTED: uncharacterized protein LOC103493452 [Cucumis melo]) HSP 1 Score: 292.0 bits (746), Expect = 7.0e-76 Identity = 148/170 (87.06%), Postives = 152/170 (89.41%), Query Frame = 1
BLAST of Csa5G021310 vs. NCBI nr
Match: gi|658062188|ref|XP_008366983.1| (PREDICTED: uncharacterized protein LOC103430615 [Malus domestica]) HSP 1 Score: 178.7 bits (452), Expect = 8.6e-42 Identity = 87/125 (69.60%), Postives = 103/125 (82.40%), Query Frame = 1
BLAST of Csa5G021310 vs. NCBI nr
Match: gi|657993744|ref|XP_008389168.1| (PREDICTED: uncharacterized protein LOC103451535 [Malus domestica]) HSP 1 Score: 178.7 bits (452), Expect = 8.6e-42 Identity = 87/125 (69.60%), Postives = 103/125 (82.40%), Query Frame = 1
BLAST of Csa5G021310 vs. NCBI nr
Match: gi|1000939505|ref|XP_002533197.2| (PREDICTED: uncharacterized protein LOC8270677 [Ricinus communis]) HSP 1 Score: 172.2 bits (435), Expect = 8.1e-40 Identity = 89/152 (58.55%), Postives = 114/152 (75.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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