Carg00140 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAACCACCTCCAAACATCCCCAATCCTTCACTCCGATTCTCTCCCCACCGTTCTCCGGCCATTTTCCGGCGACCTAAACACAACTCCAACCAAAATCACTTCCTCTTTCTCTTTCACAATCCACGATTCGCTAAATTTCAGAGCTCGCCGCCGCCGCCAACGCCTTAACGATTGCGCTGCTCGGCGGAGAGTCCGATACGATGATGAAGAAGATGAAGATGAAGAGTATGGCCACAATGAACAGATTGCGCTTCTGGAATCCTACACTCAGGCCGCCGCCGGCGAGGCGCTGATCGTTCACGCGGCGCTCGATGGCGACCTCGTTGAAGTTCTCGTCTTCAAGGTTTTTCTTCGTTTCTTTAAATTTAGGGTTTAGGTTAGATTAAAAATTTTAATTGAGAATGAGATGTAAAAATTGGACAGGGATTCTCATCGTGCTTGAGCTATGCGACTTCATCTGATCCATCCAGAAGTGTTCTTCCAGCAAGAGCAACGATTCAATCCATTGATAGAATCAAAGGCCCTTTTGATCCATCAAATATCGAATACATTGAGAGGGGTATCACTTGGGAATCATTCAACTTCCCTCCATAG ATGGCGAACCACCTCCAAACATCCCCAATCCTTCACTCCGATTCTCTCCCCACCGTTCTCCGGCCATTTTCCGGCGACCTAAACACAACTCCAACCAAAATCACTTCCTCTTTCTCTTTCACAATCCACGATTCGCTAAATTTCAGAGCTCGCCGCCGCCGCCAACGCCTTAACGATTGCGCTGCTCGGCGGAGAGTCCGATACGATGATGAAGAAGATGAAGATGAAGAGTATGGCCACAATGAACAGATTGCGCTTCTGGAATCCTACACTCAGGCCGCCGCCGGCGAGGCGCTGATCGTTCACGCGGCGCTCGATGGCGACCTCGTTGAAGTTCTCGTCTTCAAGGGATTCTCATCGTGCTTGAGCTATGCGACTTCATCTGATCCATCCAGAAGTGTTCTTCCAGCAAGAGCAACGATTCAATCCATTGATAGAATCAAAGGCCCTTTTGATCCATCAAATATCGAATACATTGAGAGGGGTATCACTTGGGAATCATTCAACTTCCCTCCATAG ATGGCGAACCACCTCCAAACATCCCCAATCCTTCACTCCGATTCTCTCCCCACCGTTCTCCGGCCATTTTCCGGCGACCTAAACACAACTCCAACCAAAATCACTTCCTCTTTCTCTTTCACAATCCACGATTCGCTAAATTTCAGAGCTCGCCGCCGCCGCCAACGCCTTAACGATTGCGCTGCTCGGCGGAGAGTCCGATACGATGATGAAGAAGATGAAGATGAAGAGTATGGCCACAATGAACAGATTGCGCTTCTGGAATCCTACACTCAGGCCGCCGCCGGCGAGGCGCTGATCGTTCACGCGGCGCTCGATGGCGACCTCGTTGAAGTTCTCGTCTTCAAGGGATTCTCATCGTGCTTGAGCTATGCGACTTCATCTGATCCATCCAGAAGTGTTCTTCCAGCAAGAGCAACGATTCAATCCATTGATAGAATCAAAGGCCCTTTTGATCCATCAAATATCGAATACATTGAGAGGGGTATCACTTGGGAATCATTCAACTTCCCTCCATAG MANHLQTSPILHSDSLPTVLRPFSGDLNTTPTKITSSFSFTIHDSLNFRARRRRQRLNDCAARRRVRYDDEEDEDEEYGHNEQIALLESYTQAAAGEALIVHAALDGDLVEVLVFKGFSSCLSYATSSDPSRSVLPARATIQSIDRIKGPFDPSNIEYIERGITWESFNFPP
BLAST of Carg00140 vs. NCBI nr
Match: XP_022942665.1 (uncharacterized protein LOC111447634 [Cucurbita moschata]) HSP 1 Score: 273.1 bits (697), Expect = 6.5e-70 Identity = 149/171 (87.13%), Postives = 151/171 (88.30%), Query Frame = 0
BLAST of Carg00140 vs. NCBI nr
Match: XP_022985163.1 (uncharacterized protein LOC111483247 [Cucurbita maxima]) HSP 1 Score: 230.7 bits (587), Expect = 3.7e-57 Identity = 150/171 (87.72%), Postives = 154/171 (90.06%), Query Frame = 0
BLAST of Carg00140 vs. NCBI nr
Match: XP_023550628.1 (uncharacterized protein LOC111808712 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 202.6 bits (514), Expect = 1.1e-48 Identity = 140/170 (82.35%), Postives = 142/170 (83.53%), Query Frame = 0
BLAST of Carg00140 vs. NCBI nr
Match: XP_008452414.1 (PREDICTED: uncharacterized protein LOC103493452 [Cucumis melo]) HSP 1 Score: 184.5 bits (467), Expect = 3.0e-43 Identity = 117/171 (68.42%), Postives = 130/171 (76.02%), Query Frame = 0
BLAST of Carg00140 vs. NCBI nr
Match: XP_022146835.1 (uncharacterized protein LOC111015943 [Momordica charantia]) HSP 1 Score: 182.2 bits (461), Expect = 1.5e-42 Identity = 103/171 (60.23%), Postives = 115/171 (67.25%), Query Frame = 0
BLAST of Carg00140 vs. TAIR10
Match: AT2G01755.1 (unknown protein) HSP 1 Score: 110.5 bits (275), Expect = 1.0e-24 Identity = 52/90 (57.78%), Postives = 71/90 (78.89%), Query Frame = 0
BLAST of Carg00140 vs. TrEMBL
Match: tr|A0A1S3BTQ8|A0A1S3BTQ8_CUCME (uncharacterized protein LOC103493452 OS=Cucumis melo OX=3656 GN=LOC103493452 PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 2.0e-43 Identity = 117/171 (68.42%), Postives = 130/171 (76.02%), Query Frame = 0
BLAST of Carg00140 vs. TrEMBL
Match: tr|A0A0A0KJ82|A0A0A0KJ82_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G021310 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 1.9e-33 Identity = 112/172 (65.12%), Postives = 122/172 (70.93%), Query Frame = 0
BLAST of Carg00140 vs. TrEMBL
Match: tr|A0A1S3VPT1|A0A1S3VPT1_VIGRR (uncharacterized protein LOC106777331 OS=Vigna radiata var. radiata OX=3916 GN=LOC106777331 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 1.1e-30 Identity = 63/90 (70.00%), Postives = 79/90 (87.78%), Query Frame = 0
BLAST of Carg00140 vs. TrEMBL
Match: tr|A0A0L9UUN4|A0A0L9UUN4_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan06g156500 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 1.1e-30 Identity = 63/90 (70.00%), Postives = 79/90 (87.78%), Query Frame = 0
BLAST of Carg00140 vs. TrEMBL
Match: tr|A0A0S3T1Y2|A0A0S3T1Y2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.10G022500 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 1.1e-30 Identity = 63/90 (70.00%), Postives = 79/90 (87.78%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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