CmaCh04G010330 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAGCTTGACCTTATCTCGAAAGGCCGAAATTCCGCCCTCATCGCATTTCTTTCAAAAACAAAATGGCGAACCACCTCCAAACATCCCCAATCCTTCACTCCGATTCTCTCCCCACCGTTCTCCGGCCATTTTCCGGCGACCTAAACACAACTCCAACCAAAATCTCTTTCTCTTTCTCTTTCACAATCCACGATTCGCTAAATTTCAGACCTCGCCGTCGCCAACGCCCTAACGATTGCGCTGCTCGGCGGAGAGTCCGATACGATGATGAAGAAGATGAAGATGAAGAGTATGGCCACAATGAACAGATTTCGCTGCTGGAATCCTACACTCAGGCCGCCGCCGGCGAGGCGCTGATCGTTCACGCGGCGCTCGATGGCGACCTTGTTGAAGTTCTCGTTTTCAAGGTTTTTCTTCGTTTCTTTAAATTTAGGGTTTAGGTTAGATTAAAATTTTTAATTGAGAATGAGATGTAAAATTGGACAGGGATTCTCATCATGCTTGAGCTATGCGACTTCATCTGATCCATCCAGAAGTGTTCTTCCAGCAAGAGCAACGATTCAATCCATTGATAGAATCAAGGGCCCATTTGATCCATCAAATATCGAATACATTCAGAAGGGTGTCACTTGGGAATCATTCAACTTCCCTACATAGCTCAATACCATACCATTCGTTCTTACAACCATCATTGTGTTAATTAATTGAATATCATTTCATTACTTCAATTTTATCAAATCCTCTCGGCAGGTTTAAATTTTA AGAGCTTGACCTTATCTCGAAAGGCCGAAATTCCGCCCTCATCGCATTTCTTTCAAAAACAAAATGGCGAACCACCTCCAAACATCCCCAATCCTTCACTCCGATTCTCTCCCCACCGTTCTCCGGCCATTTTCCGGCGACCTAAACACAACTCCAACCAAAATCTCTTTCTCTTTCTCTTTCACAATCCACGATTCGCTAAATTTCAGACCTCGCCGTCGCCAACGCCCTAACGATTGCGCTGCTCGGCGGAGAGTCCGATACGATGATGAAGAAGATGAAGATGAAGAGTATGGCCACAATGAACAGATTTCGCTGCTGGAATCCTACACTCAGGCCGCCGCCGGCGAGGCGCTGATCGTTCACGCGGCGCTCGATGGCGACCTTGTTGAAGTTCTCGTTTTCAAGGGATTCTCATCATGCTTGAGCTATGCGACTTCATCTGATCCATCCAGAAGTGTTCTTCCAGCAAGAGCAACGATTCAATCCATTGATAGAATCAAGGGCCCATTTGATCCATCAAATATCGAATACATTCAGAAGGGTGTCACTTGGGAATCATTCAACTTCCCTACATAGCTCAATACCATACCATTCGTTCTTACAACCATCATTGTGTTAATTAATTGAATATCATTTCATTACTTCAATTTTATCAAATCCTCTCGGCAGGTTTAAATTTTA ATGGCGAACCACCTCCAAACATCCCCAATCCTTCACTCCGATTCTCTCCCCACCGTTCTCCGGCCATTTTCCGGCGACCTAAACACAACTCCAACCAAAATCTCTTTCTCTTTCTCTTTCACAATCCACGATTCGCTAAATTTCAGACCTCGCCGTCGCCAACGCCCTAACGATTGCGCTGCTCGGCGGAGAGTCCGATACGATGATGAAGAAGATGAAGATGAAGAGTATGGCCACAATGAACAGATTTCGCTGCTGGAATCCTACACTCAGGCCGCCGCCGGCGAGGCGCTGATCGTTCACGCGGCGCTCGATGGCGACCTTGTTGAAGTTCTCGTTTTCAAGGGATTCTCATCATGCTTGAGCTATGCGACTTCATCTGATCCATCCAGAAGTGTTCTTCCAGCAAGAGCAACGATTCAATCCATTGATAGAATCAAGGGCCCATTTGATCCATCAAATATCGAATACATTCAGAAGGGTGTCACTTGGGAATCATTCAACTTCCCTACATAG MANHLQTSPILHSDSLPTVLRPFSGDLNTTPTKISFSFSFTIHDSLNFRPRRRQRPNDCAARRRVRYDDEEDEDEEYGHNEQISLLESYTQAAAGEALIVHAALDGDLVEVLVFKGFSSCLSYATSSDPSRSVLPARATIQSIDRIKGPFDPSNIEYIQKGVTWESFNFPT
BLAST of CmaCh04G010330 vs. TrEMBL
Match: A0A0A0KJ82_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G021310 PE=4 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 2.7e-50 Identity = 114/171 (66.67%), Postives = 127/171 (74.27%), Query Frame = 1
BLAST of CmaCh04G010330 vs. TrEMBL
Match: A0A151S584_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_028225 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 4.7e-39 Identity = 81/110 (73.64%), Postives = 96/110 (87.27%), Query Frame = 1
BLAST of CmaCh04G010330 vs. TrEMBL
Match: V7C4Y9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G017900g PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 8.0e-39 Identity = 88/156 (56.41%), Postives = 112/156 (71.79%), Query Frame = 1
BLAST of CmaCh04G010330 vs. TrEMBL
Match: B9T4M8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0053580 PE=4 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 1.8e-38 Identity = 79/111 (71.17%), Postives = 99/111 (89.19%), Query Frame = 1
BLAST of CmaCh04G010330 vs. TrEMBL
Match: A0A151S594_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_028235 PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 4.0e-38 Identity = 80/110 (72.73%), Postives = 95/110 (86.36%), Query Frame = 1
BLAST of CmaCh04G010330 vs. TAIR10
Match: AT2G01755.1 (AT2G01755.1 unknown protein) HSP 1 Score: 125.6 bits (314), Expect = 3.0e-29 Identity = 63/110 (57.27%), Postives = 85/110 (77.27%), Query Frame = 1
BLAST of CmaCh04G010330 vs. NCBI nr
Match: gi|659102980|ref|XP_008452414.1| (PREDICTED: uncharacterized protein LOC103493452 [Cucumis melo]) HSP 1 Score: 226.1 bits (575), Expect = 4.7e-56 Identity = 121/171 (70.76%), Postives = 138/171 (80.70%), Query Frame = 1
BLAST of CmaCh04G010330 vs. NCBI nr
Match: gi|778698045|ref|XP_004142303.2| (PREDICTED: uncharacterized protein LOC101213440 [Cucumis sativus]) HSP 1 Score: 206.5 bits (524), Expect = 3.8e-50 Identity = 114/171 (66.67%), Postives = 127/171 (74.27%), Query Frame = 1
BLAST of CmaCh04G010330 vs. NCBI nr
Match: gi|1009154839|ref|XP_015895389.1| (PREDICTED: uncharacterized protein LOC107429249 [Ziziphus jujuba]) HSP 1 Score: 175.6 bits (444), Expect = 7.2e-41 Identity = 97/171 (56.73%), Postives = 123/171 (71.93%), Query Frame = 1
BLAST of CmaCh04G010330 vs. NCBI nr
Match: gi|951051199|ref|XP_014520391.1| (PREDICTED: uncharacterized protein LOC106777331 [Vigna radiata var. radiata]) HSP 1 Score: 174.9 bits (442), Expect = 1.2e-40 Identity = 90/148 (60.81%), Postives = 113/148 (76.35%), Query Frame = 1
BLAST of CmaCh04G010330 vs. NCBI nr
Match: gi|1012338739|gb|KYP49985.1| (hypothetical protein KK1_028225 [Cajanus cajan]) HSP 1 Score: 169.1 bits (427), Expect = 6.8e-39 Identity = 81/110 (73.64%), Postives = 96/110 (87.27%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|