CSPI05G00550 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAACAAAAATTATAAAACAAAAGTAGAGAGACTGAATAGCTTCCACCTTATCTGCAATGGTCAAAATTCCTCCACATTTTCCTTCAACTTTCATCCAACAAAACACATAATTCAAAACCAAAAATGGCAACAAACTTCCACAAAACCCCAATCCTTCACTCAATTTCTCTTACAAATCTCTTCCCAATACTTCCCACCAATCCAAAACCATCTCTCACCAACACCCCTTTCTCTTTCCCATTAATCCATAAATCACCCAATTTCAAAACTTGTCTCCCTCGCCCTGCCCCCAATGGTTGCGCTGCTCGGCGGAGAGTTCGTTACGACGACGAAGATGAAGATGAAGATTACGGCCACAACCATCAGATTGCACTGTTGGAATCCTACACTCAGGCCGCCACAGGAGAAGCACTCATCGTTCATGCCATGGTTGACGGTGACCATGTTGAAGTTCTTGTCTTCAAGGTTTTTCCTCTTTTCTGTTCAGAGATTTATGGTTTTGGTTAAATAATTAGAATATAATTTTTAGTAATGTTTAGTAGATAAAGAAGAAGAAGAGTTGTTAAAAACTGAAAAAGAATATAAACGGAGTAGAAAATGTGTGGAATGATTAATATTATATTTGTAGGGATTCTCATCAAGTTTGAGCTATGGGACATCACCTGATCCATCAAGAAGTGTTCTTCCCGAAAGAGCAATCATTAAATTCATTGATAGAATCAAAGGCCCATTTGATCCATCAAATATCCAATACATTCAGAAGGGTATCACTTGGAATTCATTTAACTTCCTCAATTAATTCATATCAACTTCTTTTCTTCCAATTCATTTTTACCATTTTCTTAACTTTAATCGCATCTCTCTTTTCTGACAAAACTTAGAATTTCAAACAATACCATAATGATCGGGAATCAAAATTCATACTTGAACA ATGGCAACAAACTTCCACAAAACCCCAATCCTTCACTCAATTTCTCTTACAAATCTCTTCCCAATACTTCCCACCAATCCAAAACCATCTCTCACCAACACCCCTTTCTCTTTCCCATTAATCCATAAATCACCCAATTTCAAAACTTGTCTCCCTCGCCCTGCCCCCAATGGTTGCGCTGCTCGGCGGAGAGTTCGTTACGACGACGAAGATGAAGATGAAGATTACGGCCACAACCATCAGATTGCACTGTTGGAATCCTACACTCAGGCCGCCACAGGAGAAGCACTCATCGTTCATGCCATGGTTGACGGTGACCATGTTGAAGTTCTTGTCTTCAAGGGATTCTCATCAAGTTTGAGCTATGGGACATCACCTGATCCATCAAGAAGTGTTCTTCCCGAAAGAGCAATCATTAAATTCATTGATAGAATCAAAGGCCCATTTGATCCATCAAATATCCAATACATTCAGAAGGAATTTCAAACAATACCATAA ATGGCAACAAACTTCCACAAAACCCCAATCCTTCACTCAATTTCTCTTACAAATCTCTTCCCAATACTTCCCACCAATCCAAAACCATCTCTCACCAACACCCCTTTCTCTTTCCCATTAATCCATAAATCACCCAATTTCAAAACTTGTCTCCCTCGCCCTGCCCCCAATGGTTGCGCTGCTCGGCGGAGAGTTCGTTACGACGACGAAGATGAAGATGAAGATTACGGCCACAACCATCAGATTGCACTGTTGGAATCCTACACTCAGGCCGCCACAGGAGAAGCACTCATCGTTCATGCCATGGTTGACGGTGACCATGTTGAAGTTCTTGTCTTCAAGGGATTCTCATCAAGTTTGAGCTATGGGACATCACCTGATCCATCAAGAAGTGTTCTTCCCGAAAGAGCAATCATTAAATTCATTGATAGAATCAAAGGCCCATTTGATCCATCAAATATCCAATACATTCAGAAGGAATTTCAAACAATACCATAA
BLAST of CSPI05G00550 vs. TrEMBL
Match: A0A0A0KJ82_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G021310 PE=4 SV=1) HSP 1 Score: 342.4 bits (877), Expect = 3.1e-91 Identity = 167/172 (97.09%), Postives = 168/172 (97.67%), Query Frame = 1
BLAST of CSPI05G00550 vs. TrEMBL
Match: A0A068V6V0_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00018016001 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 4.7e-39 Identity = 78/108 (72.22%), Postives = 95/108 (87.96%), Query Frame = 1
BLAST of CSPI05G00550 vs. TrEMBL
Match: B9T4M8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0053580 PE=4 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 5.2e-38 Identity = 87/150 (58.00%), Postives = 110/150 (73.33%), Query Frame = 1
BLAST of CSPI05G00550 vs. TrEMBL
Match: B9HJH1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s13480g PE=4 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 5.2e-38 Identity = 80/112 (71.43%), Postives = 96/112 (85.71%), Query Frame = 1
BLAST of CSPI05G00550 vs. TrEMBL
Match: D7T8K4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05820 PE=4 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 6.8e-38 Identity = 77/110 (70.00%), Postives = 95/110 (86.36%), Query Frame = 1
BLAST of CSPI05G00550 vs. TAIR10
Match: AT2G01755.1 (AT2G01755.1 unknown protein) HSP 1 Score: 130.2 bits (326), Expect = 1.2e-30 Identity = 65/110 (59.09%), Postives = 85/110 (77.27%), Query Frame = 1
BLAST of CSPI05G00550 vs. NCBI nr
Match: gi|778698045|ref|XP_004142303.2| (PREDICTED: uncharacterized protein LOC101213440 [Cucumis sativus]) HSP 1 Score: 342.4 bits (877), Expect = 4.5e-91 Identity = 167/172 (97.09%), Postives = 168/172 (97.67%), Query Frame = 1
BLAST of CSPI05G00550 vs. NCBI nr
Match: gi|659102980|ref|XP_008452414.1| (PREDICTED: uncharacterized protein LOC103493452 [Cucumis melo]) HSP 1 Score: 288.1 bits (736), Expect = 1.0e-74 Identity = 146/169 (86.39%), Postives = 151/169 (89.35%), Query Frame = 1
BLAST of CSPI05G00550 vs. NCBI nr
Match: gi|657993744|ref|XP_008389168.1| (PREDICTED: uncharacterized protein LOC103451535 [Malus domestica]) HSP 1 Score: 173.7 bits (439), Expect = 2.7e-40 Identity = 84/125 (67.20%), Postives = 100/125 (80.00%), Query Frame = 1
BLAST of CSPI05G00550 vs. NCBI nr
Match: gi|658062188|ref|XP_008366983.1| (PREDICTED: uncharacterized protein LOC103430615 [Malus domestica]) HSP 1 Score: 173.7 bits (439), Expect = 2.7e-40 Identity = 84/125 (67.20%), Postives = 100/125 (80.00%), Query Frame = 1
BLAST of CSPI05G00550 vs. NCBI nr
Match: gi|661880004|emb|CDP16252.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 169.1 bits (427), Expect = 6.8e-39 Identity = 78/108 (72.22%), Postives = 95/108 (87.96%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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