MELO3C016661 (gene) Melon (DHL92) v3.5.1

NameMELO3C016661
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionCoffea canephora DH200=94 genomic scaffold, scaffold_120
Locationchr7 : 3259000 .. 3259738 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACAAACCTCCACAAAACCCCAATCCTTCACTCAAATTCTCTTACAAATCTCTTCCCATTTCCCAGCAATCCAAACACATCCCTCACCAACATCCCTTTCTCTTTCCCAATCCACAAATCTCCCAATTTCAAAACTTGTGTCCGTGGCCCTGGCCACAAAGGTTGCGCTGCTCGGCGGAGAGTTCGTTACGACGATGATGAAGATGAAGATGAAGATTACGGCCACAACGATCAGATTGCACTGTTGGAATCCTACACTCAGGCCGCCACGGGAGAGGCACTCATCGTTCATGCCATGGTTGACGGTGAACATGTTGAAGTTCTTGTCTTCAAGGTTTTTCCTCTTTTCTTTTGGATTAATTTACTTCATTTTTACTTTGGTATACCTTGAGAGATTTATTATTTTGGTTAAATAATTAAAATTTTAATCCATATAATTTAGTTGAAAATTAATTTGAGCTACATAGACTGGTTTTCTTTTTCCTTCCAAATCCAGCTTGGCTGGTTCTGTAAAATATTTGAAGTAAAATGATGAGAGAAAATGTGTGGTTTATACATTGTAGGGATTCTCATCATGTTTGAGCTATGGGACATCACCTGATCCATCAAGAAGTGTTGTTCCGGAAAGAGCAACCATTAAATCCATTGATAGAATCAAAGGCCCATTTGATCCATCAAATATCCAATACATTGAGAAGGGTATCACTTGGAATTCATTTAACTTCCCCAAATAA

mRNA sequence

ATGGCAACAAACCTCCACAAAACCCCAATCCTTCACTCAAATTCTCTTACAAATCTCTTCCCATTTCCCAGCAATCCAAACACATCCCTCACCAACATCCCTTTCTCTTTCCCAATCCACAAATCTCCCAATTTCAAAACTTGTGTCCGTGGCCCTGGCCACAAAGGTTGCGCTGCTCGGCGGAGAGTTCGTTACGACGATGATGAAGATGAAGATGAAGATTACGGCCACAACGATCAGATTGCACTGTTGGAATCCTACACTCAGGCCGCCACGGGAGAGGCACTCATCGTTCATGCCATGGTTGACGGTGAACATGTTGAAGTTCTTGTCTTCAAGGGATTCTCATCATGTTTGAGCTATGGGACATCACCTGATCCATCAAGAAGTGTTGTTCCGGAAAGAGCAACCATTAAATCCATTGATAGAATCAAAGGCCCATTTGATCCATCAAATATCCAATACATTGAGAAGGGTATCACTTGGAATTCATTTAACTTCCCCAAATAA

Coding sequence (CDS)

ATGGCAACAAACCTCCACAAAACCCCAATCCTTCACTCAAATTCTCTTACAAATCTCTTCCCATTTCCCAGCAATCCAAACACATCCCTCACCAACATCCCTTTCTCTTTCCCAATCCACAAATCTCCCAATTTCAAAACTTGTGTCCGTGGCCCTGGCCACAAAGGTTGCGCTGCTCGGCGGAGAGTTCGTTACGACGATGATGAAGATGAAGATGAAGATTACGGCCACAACGATCAGATTGCACTGTTGGAATCCTACACTCAGGCCGCCACGGGAGAGGCACTCATCGTTCATGCCATGGTTGACGGTGAACATGTTGAAGTTCTTGTCTTCAAGGGATTCTCATCATGTTTGAGCTATGGGACATCACCTGATCCATCAAGAAGTGTTGTTCCGGAAAGAGCAACCATTAAATCCATTGATAGAATCAAAGGCCCATTTGATCCATCAAATATCCAATACATTGAGAAGGGTATCACTTGGAATTCATTTAACTTCCCCAAATAA

Protein sequence

MATNLHKTPILHSNSLTNLFPFPSNPNTSLTNIPFSFPIHKSPNFKTCVRGPGHKGCAARRRVRYDDDEDEDEDYGHNDQIALLESYTQAATGEALIVHAMVDGEHVEVLVFKGFSSCLSYGTSPDPSRSVVPERATIKSIDRIKGPFDPSNIQYIEKGITWNSFNFPK*
BLAST of MELO3C016661 vs. TrEMBL
Match: A0A0A0KJ82_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G021310 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 4.8e-76
Identity = 148/170 (87.06%), Postives = 152/170 (89.41%), Query Frame = 1

Query: 1   MATNLHKTPILHSNSLTNLFPF-PSNPNTSLTNIPFSFP-IHKSPNFKTCVRGPGHKGCA 60
           MATN HKTPILHS SLTNLFP  PSNP  SLTN PFSFP IHKSPNFKTC+  PG   CA
Sbjct: 1   MATNFHKTPILHSISLTNLFPILPSNPKPSLTNTPFSFPLIHKSPNFKTCLPRPGPNRCA 60

Query: 61  ARRRVRY-DDDEDEDEDYGHNDQIALLESYTQAATGEALIVHAMVDGEHVEVLVFKGFSS 120
           ARRRVRY DDDEDEDEDYGHN QIALLESYTQAATGEALIVHAMVDG+HVEVLVFKGFSS
Sbjct: 61  ARRRVRYDDDDEDEDEDYGHNHQIALLESYTQAATGEALIVHAMVDGDHVEVLVFKGFSS 120

Query: 121 CLSYGTSPDPSRSVVPERATIKSIDRIKGPFDPSNIQYIEKGITWNSFNF 168
            LSYGTSPDPSRSV+PERA IK IDRIKGPFDPSNIQYI+KGITWNSFNF
Sbjct: 121 SLSYGTSPDPSRSVLPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNF 170

BLAST of MELO3C016661 vs. TrEMBL
Match: B9T4M8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0053580 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 2.9e-41
Identity = 87/142 (61.27%), Postives = 108/142 (76.06%), Query Frame = 1

Query: 26  PNTSLTNIPFSFPIHKSPNFKTCVRGPGHKGCAARRRVRYDD--DEDEDEDYGHNDQIAL 85
           PNTSL N   + P  KS              C+ARRRVRY+D  D+D+D++YGHN++IA+
Sbjct: 8   PNTSLHNNLITSPAIKSLKLSRTRVPVSWLRCSARRRVRYEDENDDDDDDEYGHNEEIAI 67

Query: 86  LESYTQAATGEALIVHAMVDGEHVEVLVFKGFSSCLSYGTSPDPSRSVVPERATIKSIDR 145
           LE Y+Q+A  EAL+VHA VD +  EVL+FKGFSSCLSY TSPDPS+SV+P RA IKSIDR
Sbjct: 68  LEFYSQSAREEALLVHAAVDEQEAEVLIFKGFSSCLSYKTSPDPSKSVLPARAVIKSIDR 127

Query: 146 IKGPFDPSNIQYIEKGITWNSF 166
           IKGPFDPSNI+Y+EKG+TW +F
Sbjct: 128 IKGPFDPSNIEYLEKGLTWQAF 149

BLAST of MELO3C016661 vs. TrEMBL
Match: A0A068V6V0_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00018016001 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 4.2e-40
Identity = 90/154 (58.44%), Postives = 113/154 (73.38%), Query Frame = 1

Query: 28  TSLTNIPFSFP---------IHKSPNFKTCVRGPG-------HKGCAARRRVRYDDDEDE 87
           TSL++ P S P          +K+ N  + ++G            C+ARRRV Y +DE+E
Sbjct: 9   TSLSSSPCSLPHFSTDSNSTFNKTLNISSFIKGSKLDKRWNLDSKCSARRRVVY-EDEEE 68

Query: 88  DEDYGHNDQIALLESYTQAATGEALIVHAMVDGEHVEVLVFKGFSSCLSYGTSPDPSRSV 147
           DE+YG+N +IA+LE+YTQ+A  EAL+V AMVD E VEVL+FKGFSSCLSYGTSPDPSRSV
Sbjct: 69  DEEYGYNAEIAMLETYTQSARNEALLVKAMVDEEEVEVLIFKGFSSCLSYGTSPDPSRSV 128

Query: 148 VPERATIKSIDRIKGPFDPSNIQYIEKGITWNSF 166
           +P RA IKSIDR+KGPF+PSNI+YIEKG+TW  F
Sbjct: 129 LPTRAEIKSIDRVKGPFEPSNIEYIEKGLTWEIF 161

BLAST of MELO3C016661 vs. TrEMBL
Match: A0A0D2W0L8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G182800 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.7e-39
Identity = 90/147 (61.22%), Postives = 111/147 (75.51%), Query Frame = 1

Query: 22  FPSNPNTSLTNIPFSFPIHKSPNFKTCVRGPGHK-GCAA-RRRVRYDDDEDEDE-DYGHN 81
           FP   N+  TN        K+  FK C     H+  CAA RRR+RY++D+DE+E + G+N
Sbjct: 21  FPKEINSLKTNRSAIVVAVKA--FKFCNYRRAHRISCAAARRRIRYENDDDEEEKENGYN 80

Query: 82  DQIALLESYTQAATGEALIVHAMVDGEHVEVLVFKGFSSCLSYGTSPDPSRSVVPERATI 141
            +IA+LE Y+Q+A  EALIVHA+VD + VEVL+FKGFSSCLSYGTSPDPS+SV+P+RA I
Sbjct: 81  KEIAMLEIYSQSAREEALIVHALVDEQQVEVLIFKGFSSCLSYGTSPDPSKSVIPKRAVI 140

Query: 142 KSIDRIKGPFDPSNIQYIEKGITWNSF 166
            SIDRIKGPFDPSNIQYIEKG+ W SF
Sbjct: 141 NSIDRIKGPFDPSNIQYIEKGLDWESF 165

BLAST of MELO3C016661 vs. TrEMBL
Match: D7T8K4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05820 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 4.7e-39
Identity = 78/110 (70.91%), Postives = 98/110 (89.09%), Query Frame = 1

Query: 57  CAARRRVRY-DDDEDEDEDYGHNDQIALLESYTQAATGEALIVHAMVDGEHVEVLVFKGF 116
           C ARRRVRY D+DE E+++YGHN +IA+LE Y+Q+A GEAL+VHAMVD + VEVL+FKGF
Sbjct: 52  CRARRRVRYEDEDEGEEDEYGHNAEIAMLELYSQSARGEALLVHAMVDDQDVEVLIFKGF 111

Query: 117 SSCLSYGTSPDPSRSVVPERATIKSIDRIKGPFDPSNIQYIEKGITWNSF 166
           SSCLSY TSPDPS+S++P RA IKSIDRIKGPF+PS+I+YIEKG+ W++F
Sbjct: 112 SSCLSYRTSPDPSKSILPARAVIKSIDRIKGPFNPSDIEYIEKGLAWDAF 161

BLAST of MELO3C016661 vs. TAIR10
Match: AT2G01755.1 (AT2G01755.1 unknown protein)

HSP 1 Score: 131.7 bits (330), Expect = 4.2e-31
Identity = 65/110 (59.09%), Postives = 84/110 (76.36%), Query Frame = 1

Query: 57  CAARRRVRYDDD-EDEDEDYGHNDQIALLESYTQAATGEALIVHAMVDGEHVEVLVFKGF 116
           C ARRRVR +   EDEDE YG+N+++A+LE Y+Q+   EALIV A+VD E VEV++FKG 
Sbjct: 58  CGARRRVRDEGGGEDEDEMYGYNEEMAMLEIYSQSCREEALIVTAIVDDEEVEVVIFKGV 117

Query: 117 SSCLSYGTSPDPSRSVVPERATIKSIDRIKGPFDPSNIQYIEKGITWNSF 166
           SSCLS  T+ DP+RSV+PERA I  IDR++GPFDPS I YI++ I++ +F
Sbjct: 118 SSCLSGETAVDPARSVLPERAVITKIDRVRGPFDPSQIHYIQRDISFQAF 167

BLAST of MELO3C016661 vs. NCBI nr
Match: gi|659102980|ref|XP_008452414.1| (PREDICTED: uncharacterized protein LOC103493452 [Cucumis melo])

HSP 1 Score: 354.8 bits (909), Expect = 8.6e-95
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1

Query: 1   MATNLHKTPILHSNSLTNLFPFPSNPNTSLTNIPFSFPIHKSPNFKTCVRGPGHKGCAAR 60
           MATNLHKTPILHSNSLTNLFPFPSNPNTSLTNIPFSFPIHKSPNFKTCVRGPGHKGCAAR
Sbjct: 1   MATNLHKTPILHSNSLTNLFPFPSNPNTSLTNIPFSFPIHKSPNFKTCVRGPGHKGCAAR 60

Query: 61  RRVRYDDDEDEDEDYGHNDQIALLESYTQAATGEALIVHAMVDGEHVEVLVFKGFSSCLS 120
           RRVRYDDDEDEDEDYGHNDQIALLESYTQAATGEALIVHAMVDGEHVEVLVFKGFSSCLS
Sbjct: 61  RRVRYDDDEDEDEDYGHNDQIALLESYTQAATGEALIVHAMVDGEHVEVLVFKGFSSCLS 120

Query: 121 YGTSPDPSRSVVPERATIKSIDRIKGPFDPSNIQYIEKGITWNSFNFPK 170
           YGTSPDPSRSVVPERATIKSIDRIKGPFDPSNIQYIEKGITWNSFNFPK
Sbjct: 121 YGTSPDPSRSVVPERATIKSIDRIKGPFDPSNIQYIEKGITWNSFNFPK 169

BLAST of MELO3C016661 vs. NCBI nr
Match: gi|778698045|ref|XP_004142303.2| (PREDICTED: uncharacterized protein LOC101213440 [Cucumis sativus])

HSP 1 Score: 292.0 bits (746), Expect = 6.9e-76
Identity = 148/170 (87.06%), Postives = 152/170 (89.41%), Query Frame = 1

Query: 1   MATNLHKTPILHSNSLTNLFPF-PSNPNTSLTNIPFSFP-IHKSPNFKTCVRGPGHKGCA 60
           MATN HKTPILHS SLTNLFP  PSNP  SLTN PFSFP IHKSPNFKTC+  PG   CA
Sbjct: 1   MATNFHKTPILHSISLTNLFPILPSNPKPSLTNTPFSFPLIHKSPNFKTCLPRPGPNRCA 60

Query: 61  ARRRVRY-DDDEDEDEDYGHNDQIALLESYTQAATGEALIVHAMVDGEHVEVLVFKGFSS 120
           ARRRVRY DDDEDEDEDYGHN QIALLESYTQAATGEALIVHAMVDG+HVEVLVFKGFSS
Sbjct: 61  ARRRVRYDDDDEDEDEDYGHNHQIALLESYTQAATGEALIVHAMVDGDHVEVLVFKGFSS 120

Query: 121 CLSYGTSPDPSRSVVPERATIKSIDRIKGPFDPSNIQYIEKGITWNSFNF 168
            LSYGTSPDPSRSV+PERA IK IDRIKGPFDPSNIQYI+KGITWNSFNF
Sbjct: 121 SLSYGTSPDPSRSVLPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNF 170

BLAST of MELO3C016661 vs. NCBI nr
Match: gi|223526995|gb|EEF29189.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 176.4 bits (446), Expect = 4.2e-41
Identity = 87/142 (61.27%), Postives = 108/142 (76.06%), Query Frame = 1

Query: 26  PNTSLTNIPFSFPIHKSPNFKTCVRGPGHKGCAARRRVRYDD--DEDEDEDYGHNDQIAL 85
           PNTSL N   + P  KS              C+ARRRVRY+D  D+D+D++YGHN++IA+
Sbjct: 8   PNTSLHNNLITSPAIKSLKLSRTRVPVSWLRCSARRRVRYEDENDDDDDDEYGHNEEIAI 67

Query: 86  LESYTQAATGEALIVHAMVDGEHVEVLVFKGFSSCLSYGTSPDPSRSVVPERATIKSIDR 145
           LE Y+Q+A  EAL+VHA VD +  EVL+FKGFSSCLSY TSPDPS+SV+P RA IKSIDR
Sbjct: 68  LEFYSQSAREEALLVHAAVDEQEAEVLIFKGFSSCLSYKTSPDPSKSVLPARAVIKSIDR 127

Query: 146 IKGPFDPSNIQYIEKGITWNSF 166
           IKGPFDPSNI+Y+EKG+TW +F
Sbjct: 128 IKGPFDPSNIEYLEKGLTWQAF 149

BLAST of MELO3C016661 vs. NCBI nr
Match: gi|1000939505|ref|XP_002533197.2| (PREDICTED: uncharacterized protein LOC8270677 [Ricinus communis])

HSP 1 Score: 176.4 bits (446), Expect = 4.2e-41
Identity = 87/142 (61.27%), Postives = 108/142 (76.06%), Query Frame = 1

Query: 26  PNTSLTNIPFSFPIHKSPNFKTCVRGPGHKGCAARRRVRYDD--DEDEDEDYGHNDQIAL 85
           PNTSL N   + P  KS              C+ARRRVRY+D  D+D+D++YGHN++IA+
Sbjct: 23  PNTSLHNNLITSPAIKSLKLSRTRVPVSWLRCSARRRVRYEDENDDDDDDEYGHNEEIAI 82

Query: 86  LESYTQAATGEALIVHAMVDGEHVEVLVFKGFSSCLSYGTSPDPSRSVVPERATIKSIDR 145
           LE Y+Q+A  EAL+VHA VD +  EVL+FKGFSSCLSY TSPDPS+SV+P RA IKSIDR
Sbjct: 83  LEFYSQSAREEALLVHAAVDEQEAEVLIFKGFSSCLSYKTSPDPSKSVLPARAVIKSIDR 142

Query: 146 IKGPFDPSNIQYIEKGITWNSF 166
           IKGPFDPSNI+Y+EKG+TW +F
Sbjct: 143 IKGPFDPSNIEYLEKGLTWQAF 164

BLAST of MELO3C016661 vs. NCBI nr
Match: gi|661880004|emb|CDP16252.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 172.6 bits (436), Expect = 6.1e-40
Identity = 90/154 (58.44%), Postives = 113/154 (73.38%), Query Frame = 1

Query: 28  TSLTNIPFSFP---------IHKSPNFKTCVRGPG-------HKGCAARRRVRYDDDEDE 87
           TSL++ P S P          +K+ N  + ++G            C+ARRRV Y +DE+E
Sbjct: 9   TSLSSSPCSLPHFSTDSNSTFNKTLNISSFIKGSKLDKRWNLDSKCSARRRVVY-EDEEE 68

Query: 88  DEDYGHNDQIALLESYTQAATGEALIVHAMVDGEHVEVLVFKGFSSCLSYGTSPDPSRSV 147
           DE+YG+N +IA+LE+YTQ+A  EAL+V AMVD E VEVL+FKGFSSCLSYGTSPDPSRSV
Sbjct: 69  DEEYGYNAEIAMLETYTQSARNEALLVKAMVDEEEVEVLIFKGFSSCLSYGTSPDPSRSV 128

Query: 148 VPERATIKSIDRIKGPFDPSNIQYIEKGITWNSF 166
           +P RA IKSIDR+KGPF+PSNI+YIEKG+TW  F
Sbjct: 129 LPTRAEIKSIDRVKGPFEPSNIEYIEKGLTWEIF 161

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KJ82_CUCSA4.8e-7687.06Uncharacterized protein OS=Cucumis sativus GN=Csa_5G021310 PE=4 SV=1[more]
B9T4M8_RICCO2.9e-4161.27Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0053580 PE=4 SV=1[more]
A0A068V6V0_COFCA4.2e-4058.44Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00018016001 PE=4 SV=1[more]
A0A0D2W0L8_GOSRA2.7e-3961.22Uncharacterized protein OS=Gossypium raimondii GN=B456_012G182800 PE=4 SV=1[more]
D7T8K4_VITVI4.7e-3970.91Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05820 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
AT2G01755.14.2e-3159.09 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659102980|ref|XP_008452414.1|8.6e-95100.00PREDICTED: uncharacterized protein LOC103493452 [Cucumis melo][more]
gi|778698045|ref|XP_004142303.2|6.9e-7687.06PREDICTED: uncharacterized protein LOC101213440 [Cucumis sativus][more]
gi|223526995|gb|EEF29189.1|4.2e-4161.27conserved hypothetical protein [Ricinus communis][more]
gi|1000939505|ref|XP_002533197.2|4.2e-4161.27PREDICTED: uncharacterized protein LOC8270677 [Ricinus communis][more]
gi|661880004|emb|CDP16252.1|6.1e-4058.44unnamed protein product [Coffea canephora][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0009507 chloroplast
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C016661T1MELO3C016661T1mRNA


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36729FAMILY NOT NAMEDcoord: 57..165
score: 1.7
NoneNo IPR availablePANTHERPTHR36729:SF1SUBFAMILY NOT NAMEDcoord: 57..165
score: 1.7