Csa4G192030 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G192030
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionEthylene-responsive transcription factor; contains IPR016177 (DNA-binding, integrase-type)
LocationChr4 : 9416383 .. 9417867 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATTGACTTCCAGTCGCCGGAGATCCACCGCGGAGCCACCGCCTCCATAATAAAATCAACCAAATTCAAAGGCAGAAACAGAAGTAACAATAATGGCAACAAGTTCGTCGGAGTCCGGCAACGGCCGTCCGGCAGATGGGTAGCGGAAATCAAAGACACAACGAAGAAAATTCGAATGTGGCTCGGAACTTTCGAGACCGCCGAAGAAGCCGCCCGTGCTTACGATGAAGCCGCTTGTCTTCTTCGAGGTTCGAACACAAGAACCAATTTCATTCCTCAAATCTCAACAAATTCCCCAATCGCTTCTCGGATTCGTTCTCTCTTAAACACCAAAAAAACCGTAAATCGAAAACCCCCGGAAAAACCCACCACCTCCGCCGCCGTCTCTGCCGGTTCCGCCGTCGTGGACCCGTCAATTAAAGACGATGGATTGTTCGAGGGAGCGTATAAACCGGATATGACTAATTGTTTGGAAGAAAGAGAGGTGAGTTCTTGTGATTCGTGTTGCTCTGAATCTTGTGAATTGGGGGTTTCATTGGCGGAGAATGGGACAGTGAGTTCAGAGGAATTGGAGTTGTGTGCTTTTGAGAGAATGAAAGTTGAGAGACAAATTTCAGCCTCTTTGTATGCTATTAATGGAGTTCAAGAGTATATGGAGGCTGTTCATGAAGCTTCTGAACCCATTTGGGATCTTCCACCACTCTGTTCTTTGTTCTGTTGACGATGATGAAGAAGAAGAAGAAGAAGACAAAGAAAGGGTTTTCTGTTTCTTTCTCTCCCTCTTTTTTGGTTTAAATTTTGTATACAAATTTGTATGTTGATGATCATAAAAGGTAAATTAAAGAAATTAAATGCAACTTTATGTTTTTGTTTCAAAAATATATATATTTCTCTTATTTCCAAATTTCTACTCTCTTTTTTATTCATTTGATCGTTTCGTCTCTTCTGCTGAAGGTGGAGTTGAACCATGCTAATGCATTTTTTCCCTCTCATCTACGTGATTCTAACTCAATACAAATGTGATCTTTTGGTTATACGAATAATATCATATAATATAAAAGAAAATACGTAACCTTCCATGAATAAGAGATTTGAGCCAAATAATTTCACGTTGTCTCTTTTAACATATGTTTACACGCTATACTGATTAAGTTTCAAAAGTAATTGTTTCCACGATAGAAAATATTACCTTTCTCATACAAGCAAAACATTAGCTCTACTTTGTAGAATAAAGAAAACTCGTAAGGGAGACAAATGTCAAAATCTCCTTTGAAGAAGGGACATATTTATAGATTAATTTGTATCATTTGGATAATATGTTCCTTCTTCAAGTTGGTTAAAATTTGAGATGAAGATATATCGATGAAAGAATGCAACTAATGAAATTGAAACTAGAACACTAGACGATAATGAAAGTTTTTTTTTTCCCTTCATATTTTGGTGTTGAAGTTTTAGGAATGACCCTTGTAATGATTCATAG

mRNA sequence

ATGGAAATTGACTTCCAGTCGCCGGAGATCCACCGCGGAGCCACCGCCTCCATAATAAAATCAACCAAATTCAAAGGCAGAAACAGAAGTAACAATAATGGCAACAAGTTCGTCGGAGTCCGGCAACGGCCGTCCGGCAGATGGGTAGCGGAAATCAAAGACACAACGAAGAAAATTCGAATGTGGCTCGGAACTTTCGAGACCGCCGAAGAAGCCGCCCGTGCTTACGATGAAGCCGCTTGTCTTCTTCGAGGTTCGAACACAAGAACCAATTTCATTCCTCAAATCTCAACAAATTCCCCAATCGCTTCTCGGATTCGTTCTCTCTTAAACACCAAAAAAACCGTAAATCGAAAACCCCCGGAAAAACCCACCACCTCCGCCGCCGTCTCTGCCGGTTCCGCCGTCGTGGACCCGTCAATTAAAGACGATGGATTGTTCGAGGGAGCGTATAAACCGGATATGACTAATTGTTTGGAAGAAAGAGAGGTGAGTTCTTGTGATTCGTGTTGCTCTGAATCTTGTGAATTGGGGGTTTCATTGGCGGAGAATGGGACAGTGAGTTCAGAGGAATTGGAGTTGTGTGCTTTTGAGAGAATGAAAGTTGAGAGACAAATTTCAGCCTCTTTGTATGCTATTAATGGAGTTCAAGAGAATGACCCTTGTAATGATTCATAG

Coding sequence (CDS)

ATGGAAATTGACTTCCAGTCGCCGGAGATCCACCGCGGAGCCACCGCCTCCATAATAAAATCAACCAAATTCAAAGGCAGAAACAGAAGTAACAATAATGGCAACAAGTTCGTCGGAGTCCGGCAACGGCCGTCCGGCAGATGGGTAGCGGAAATCAAAGACACAACGAAGAAAATTCGAATGTGGCTCGGAACTTTCGAGACCGCCGAAGAAGCCGCCCGTGCTTACGATGAAGCCGCTTGTCTTCTTCGAGGTTCGAACACAAGAACCAATTTCATTCCTCAAATCTCAACAAATTCCCCAATCGCTTCTCGGATTCGTTCTCTCTTAAACACCAAAAAAACCGTAAATCGAAAACCCCCGGAAAAACCCACCACCTCCGCCGCCGTCTCTGCCGGTTCCGCCGTCGTGGACCCGTCAATTAAAGACGATGGATTGTTCGAGGGAGCGTATAAACCGGATATGACTAATTGTTTGGAAGAAAGAGAGGTGAGTTCTTGTGATTCGTGTTGCTCTGAATCTTGTGAATTGGGGGTTTCATTGGCGGAGAATGGGACAGTGAGTTCAGAGGAATTGGAGTTGTGTGCTTTTGAGAGAATGAAAGTTGAGAGACAAATTTCAGCCTCTTTGTATGCTATTAATGGAGTTCAAGAGAATGACCCTTGTAATGATTCATAG

Protein sequence

MEIDFQSPEIHRGATASIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKPPEKPTTSAAVSAGSAVVDPSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCELGVSLAENGTVSSEELELCAFERMKVERQISASLYAINGVQENDPCNDS*
Homology
[Close]
BLAST of Csa4G192030 vs. Swiss-Prot
Match: RA211_ARATH (Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana GN=RAP2-11 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.9e-33
Identity = 92/213 (43.19%), Postives = 124/213 (58.22%), Query Frame = 1 

Query: 23  KFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACL 82
           K K + +S  N  KFVGVRQRPSG+WVAEIKDTT+KIRMWLGTFETAEEAARAYDEAACL
Sbjct: 8   KQKTKEKSKGNKTKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACL 67

Query: 83  LRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKPPE--KPTTSAA------VSAGS 142
           LRGSNTRTNF      NS ++ +IR+LL+ K+++ ++  +  KP +S        +S  +
Sbjct: 68  LRGSNTRTNFANHFPNNSQLSLKIRNLLHQKQSMKQQQQQQHKPVSSLTDCNINYISTAT 127

Query: 143 AVVDPSIKDDGL---FEGAYKPDMTNCLEEREVSSCDSCCSESCELG----VSLAENGTV 202
           ++   +             Y+PD ++ + + E        S     G    + LA+ G  
Sbjct: 128 SLTTTTTTTTTTAIPLNNVYRPD-SSVIGQPETEGLQLPYSWPLVSGFNHQIPLAQAGGE 187

Query: 203 SSEEL--ELCAFERM---KVERQISASLYAING 216
           +   L       + +   ++ERQISASLYA+NG
Sbjct: 188 THGHLNDHYSTDQHLGLAEIERQISASLYAMNG 219

[Close]
BLAST of Csa4G192030 vs. Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 7.4e-17
Identity = 46/100 (46.00%), Postives = 60/100 (60.00%), Query Frame = 1 

Query: 36  KFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQ 95
           KF GVRQRP G+W AEI+D  K++R+WLGT+ TAEEAA  YD AA  LRG +  TNF   
Sbjct: 121 KFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNFSVT 180

Query: 96  ISTNSPIASRIRSLLNTKKTVNRKPPEKPTTSAAVSAGSA 136
            +T +   +   S +  KK  N K  +  T S+++S  S+
Sbjct: 181 PTTATEKKAPPPSPVKKKKKKNNKSKKSVTASSSISRSSS 220

[Close]
BLAST of Csa4G192030 vs. Swiss-Prot
Match: LEP_ARATH (Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana GN=LEP PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 9.6e-17
Identity = 60/175 (34.29%), Postives = 89/175 (50.86%), Query Frame = 1 

Query: 19  IKSTKFKGRNRSNNN-GNKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYD 78
           + +T  K + + ++  G +F+GVR+RP GR+ AEI+D T K R WLGTF+TAEEAA AYD
Sbjct: 1   MNTTSSKSKKKQDDQVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAALAYD 60

Query: 79  EAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKPPEKPTTSAAV------- 138
            AA  +RG+  RTNF   + ++ P +S + S+++        PP  P ++  V       
Sbjct: 61  RAARSMRGTRARTNF---VYSDMPPSSSVTSIVSPDDPPPPPPPPAPPSNDPVDYMMMFN 120

Query: 139 ---SAGSAVVDPSIK--DDGLFEGA-------YKPDMTNCLEEREVSSCDSCCSE 174
              S  S ++ P     D  +F G+       Y  D +N L        +SC S+
Sbjct: 121 QYSSTDSPMLQPHCDQVDSYMFGGSQSSNSYCYSNDSSNELPPLPSDLSNSCYSQ 172

[Close]
BLAST of Csa4G192030 vs. Swiss-Prot
Match: ABI4_ARATH (Ethylene-responsive transcription factor ABI4 OS=Arabidopsis thaliana GN=ABI4 PE=1 SV=2)

HSP 1 Score: 85.9 bits (211), Expect = 6.2e-16
Identity = 49/121 (40.50%), Postives = 64/121 (52.89%), Query Frame = 1 

Query: 23  KFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACL 82
           K KG+   +N+  ++ GVRQR  G+WVAEI++  K+ R WLGTF TAE+AARAYD AA  
Sbjct: 41  KRKGKGGPDNSKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAVY 100

Query: 83  LRGSNTRTNFIP----QISTNSPIASRIRSLLNTKKTVNRKPPEKPTTSAAVSAGSAVVD 140
           L GS  + N  P     +S++S   S   S   +  +     P  P  +AA   G A   
Sbjct: 101 LYGSRAQLNLTPSSPSSVSSSSSSVSAASSPSTSSSSTQTLRPLLPRPAAATVGGGANFG 160

[Close]
BLAST of Csa4G192030 vs. Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 8.1e-16
Identity = 50/127 (39.37%), Postives = 68/127 (53.54%), Query Frame = 1 

Query: 17  SIIKSTKFKG---RNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAA 76
           S I +  F G   ++      N+F G+RQRP G+W AEI+D  K +R+WLGTF +AEEAA
Sbjct: 97  STITTAGFDGPAAKSAKRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAA 156

Query: 77  RAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKPPEKPTTSAAVSAG 136
           RAYD  A  +RG   + NF    +T     +   +    K +V +KP  KP  +   +A 
Sbjct: 157 RAYDAEARRIRGKKAKVNFPEAPTTAQKRRAGSTTAKAPKSSVEQKPTVKPAFNNLANA- 216

Query: 137 SAVVDPS 141
           +A V PS
Sbjct: 217 NAFVYPS 222

[Close]
BLAST of Csa4G192030 vs. TrEMBL
Match: A0A0A0L1B8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G192030 PE=4 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 3.7e-124
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 1 

Query: 1   MEIDFQSPEIHRGATASIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR 60
           MEIDFQSPEIHRGATASIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR
Sbjct: 1   MEIDFQSPEIHRGATASIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR 60

Query: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKP 120
           MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKP
Sbjct: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKP 120

Query: 121 PEKPTTSAAVSAGSAVVDPSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCELGVS 180
           PEKPTTSAAVSAGSAVVDPSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCELGVS
Sbjct: 121 PEKPTTSAAVSAGSAVVDPSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCELGVS 180

Query: 181 LAENGTVSSEELELCAFERMKVERQISASLYAINGVQENDPCNDS 226
           LAENGTVSSEELELCAFERMKVERQISASLYAINGVQENDPCNDS
Sbjct: 181 LAENGTVSSEELELCAFERMKVERQISASLYAINGVQENDPCNDS 225

[Close]
BLAST of Csa4G192030 vs. TrEMBL
Match: D7TI77_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g07250 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 5.4e-59
Identity = 141/244 (57.79%), Postives = 167/244 (68.44%), Query Frame = 1 

Query: 1   MEIDFQSPEIHRGATASIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR 60
           MEI FQ P+    AT    K  KFKGRNRSN+N NKFVGVRQRPSGRWVAEIKDTT+KIR
Sbjct: 1   MEIQFQQPKGAIPAT----KVRKFKGRNRSNSN-NKFVGVRQRPSGRWVAEIKDTTQKIR 60

Query: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKP 120
           MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIP +S+NSP+ASRIR+LL+ KK    K 
Sbjct: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPNVSSNSPLASRIRTLLDNKK--GAKQ 120

Query: 121 PEK--------------PTTSAAVSAGS-AVVDPSIKDDGLFEGAYKPDMTNCLEEREVS 180
           P++              P  S+  S+GS ++    I++  LF+ AYKPD++NC EE E+ 
Sbjct: 121 PKQTSVDSSNISTTIVTPCASSCTSSGSNSLSSEKIQETQLFDDAYKPDLSNCSEEVELG 180

Query: 181 SCDSCCSESCELG----------VSLAENGTVS-SEELELCAFERMKVERQISASLYAIN 219
           S +S  S     G          + L +NG +  + E E   FERMKVERQISASLYA+N
Sbjct: 181 SSESGLSWGFAAGFDRFSFAQQVLDLPKNGGLQEAAEGEFSEFERMKVERQISASLYAMN 237

[Close]
BLAST of Csa4G192030 vs. TrEMBL
Match: A0A067L5C6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02710 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.5e-58
Identity = 131/248 (52.82%), Postives = 162/248 (65.32%), Query Frame = 1 

Query: 1   MEIDFQSPEIHRGATASIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR 60
           MEI FQ  + H+ ++  + K++KFKGR+R NNN NKFVGVRQRPSGRWVAEIKDTT+KIR
Sbjct: 1   MEIQFQQQKQHKSSSVPVNKTSKFKGRHRPNNNNNKFVGVRQRPSGRWVAEIKDTTQKIR 60

Query: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKP 120
           MWLGTFETAEEAARAYDEAACLLRGSNTRTNFI Q+S +SP+ASRIR+LL  KK   ++ 
Sbjct: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFITQVSLDSPLASRIRNLLKNKKAGKKQQ 120

Query: 121 PEK-------------PTTSAAVSAGSAVVDPS------IKDDGLFEGAYKPDMTNCLEE 180
            E+              T++   S+ S+ +D S      + D   F+  YKPDM+NC EE
Sbjct: 121 REEENLEVSTPSNSTVTTSTCTSSSSSSSIDNSTPSGEIVNDTQFFDDVYKPDMSNCREE 180

Query: 181 REVSSCDSCCSESCELG----------VSLAENGTV-SSEELELCAFERMKVERQISASL 219
            E+    S  S     G          +    N  +  + +LE   F+RMKVERQISASL
Sbjct: 181 FELGPFQSDLSWGFGSGLDRFSFTQEVLDFPRNMLLPETSDLEFTEFDRMKVERQISASL 240

[Close]
BLAST of Csa4G192030 vs. TrEMBL
Match: I1N899_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G113100 PE=4 SV=2)

HSP 1 Score: 232.6 bits (592), Expect = 4.6e-58
Identity = 136/253 (53.75%), Postives = 165/253 (65.22%), Query Frame = 1 

Query: 1   MEIDFQSPEI-HRGATASIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKI 60
           MEI FQ P + H+ +  +I K  KFKGR+R NNN NKFVGVRQRPSGRWVAEIKDTT+KI
Sbjct: 1   MEIQFQQPNLQHQKSGIAITKGGKFKGRSR-NNNTNKFVGVRQRPSGRWVAEIKDTTQKI 60

Query: 61  RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTV--- 120
           RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFI  +S +SP+ASRIR+LLN +K +   
Sbjct: 61  RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFITHVSLDSPLASRIRNLLNNRKGIKKE 120

Query: 121 --------NRKPPEKPTTSAAVSAGSAVVDPSIKDD-------------GLFEGAYKPDM 180
                   N   P   TTS+A S G++    +  D+              LF+ AYKPD+
Sbjct: 121 EDANANANNAPAPRVSTTSSATSTGTSSNSSNGNDNNDQSLSTVTTQSSNLFDDAYKPDL 180

Query: 181 TNCLEERE---VSSCDSCCSESCE-------LGVSLAENGTVSSEELELCAFERMKVERQ 219
           +NC EE E    S+   C     +         +   ++G  ++ +L+L  FERMKVERQ
Sbjct: 181 SNCREEFESGHQSNTSWCFGPVFDRFPMAQIFDIPKIDDGLTNAADLDLSEFERMKVERQ 240

[Close]
BLAST of Csa4G192030 vs. TrEMBL
Match: A0A0B2RSB3_GLYSO (Ethylene-responsive transcription factor RAP2-11 OS=Glycine soja GN=glysoja_011240 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 4.6e-58
Identity = 136/253 (53.75%), Postives = 165/253 (65.22%), Query Frame = 1 

Query: 1   MEIDFQSPEI-HRGATASIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKI 60
           MEI FQ P + H+ +  +I K  KFKGR+R NNN NKFVGVRQRPSGRWVAEIKDTT+KI
Sbjct: 1   MEIQFQQPNLQHQKSGIAITKGGKFKGRSR-NNNTNKFVGVRQRPSGRWVAEIKDTTQKI 60

Query: 61  RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTV--- 120
           RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFI  +S +SP+ASRIR+LLN +K +   
Sbjct: 61  RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFITHVSLDSPLASRIRNLLNNRKGIKKE 120

Query: 121 --------NRKPPEKPTTSAAVSAGSAVVDPSIKDD-------------GLFEGAYKPDM 180
                   N   P   TTS+A S G++    +  D+              LF+ AYKPD+
Sbjct: 121 EDANANANNAPAPRVSTTSSATSTGTSSNSSNGNDNNDQSLSTVTTQSSNLFDDAYKPDL 180

Query: 181 TNCLEERE---VSSCDSCCSESCE-------LGVSLAENGTVSSEELELCAFERMKVERQ 219
           +NC EE E    S+   C     +         +   ++G  ++ +L+L  FERMKVERQ
Sbjct: 181 SNCREEFESGHQSNTSWCFGPVFDRFPMAQIFDIPKIDDGLTNAADLDLSEFERMKVERQ 240

[Close]
BLAST of Csa4G192030 vs. TAIR10
Match: AT5G19790.1 (AT5G19790.1 related to AP2 11)

HSP 1 Score: 144.1 bits (362), Expect = 1.1e-34
Identity = 92/213 (43.19%), Postives = 124/213 (58.22%), Query Frame = 1 

Query: 23  KFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACL 82
           K K + +S  N  KFVGVRQRPSG+WVAEIKDTT+KIRMWLGTFETAEEAARAYDEAACL
Sbjct: 8   KQKTKEKSKGNKTKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACL 67

Query: 83  LRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKPPE--KPTTSAA------VSAGS 142
           LRGSNTRTNF      NS ++ +IR+LL+ K+++ ++  +  KP +S        +S  +
Sbjct: 68  LRGSNTRTNFANHFPNNSQLSLKIRNLLHQKQSMKQQQQQQHKPVSSLTDCNINYISTAT 127

Query: 143 AVVDPSIKDDGL---FEGAYKPDMTNCLEEREVSSCDSCCSESCELG----VSLAENGTV 202
           ++   +             Y+PD ++ + + E        S     G    + LA+ G  
Sbjct: 128 SLTTTTTTTTTTAIPLNNVYRPD-SSVIGQPETEGLQLPYSWPLVSGFNHQIPLAQAGGE 187

Query: 203 SSEEL--ELCAFERM---KVERQISASLYAING 216
           +   L       + +   ++ERQISASLYA+NG
Sbjct: 188 THGHLNDHYSTDQHLGLAEIERQISASLYAMNG 219

[Close]
BLAST of Csa4G192030 vs. TAIR10
Match: AT4G23750.1 (AT4G23750.1 cytokinin response factor 2)

HSP 1 Score: 89.0 bits (219), Expect = 4.1e-18
Identity = 46/100 (46.00%), Postives = 60/100 (60.00%), Query Frame = 1 

Query: 36  KFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQ 95
           KF GVRQRP G+W AEI+D  K++R+WLGT+ TAEEAA  YD AA  LRG +  TNF   
Sbjct: 121 KFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNFSVT 180

Query: 96  ISTNSPIASRIRSLLNTKKTVNRKPPEKPTTSAAVSAGSA 136
            +T +   +   S +  KK  N K  +  T S+++S  S+
Sbjct: 181 PTTATEKKAPPPSPVKKKKKKNNKSKKSVTASSSISRSSS 220

[Close]
BLAST of Csa4G192030 vs. TAIR10
Match: AT5G13910.1 (AT5G13910.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 88.6 bits (218), Expect = 5.4e-18
Identity = 60/175 (34.29%), Postives = 89/175 (50.86%), Query Frame = 1 

Query: 19  IKSTKFKGRNRSNNN-GNKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYD 78
           + +T  K + + ++  G +F+GVR+RP GR+ AEI+D T K R WLGTF+TAEEAA AYD
Sbjct: 1   MNTTSSKSKKKQDDQVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAALAYD 60

Query: 79  EAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKPPEKPTTSAAV------- 138
            AA  +RG+  RTNF   + ++ P +S + S+++        PP  P ++  V       
Sbjct: 61  RAARSMRGTRARTNF---VYSDMPPSSSVTSIVSPDDPPPPPPPPAPPSNDPVDYMMMFN 120

Query: 139 ---SAGSAVVDPSIK--DDGLFEGA-------YKPDMTNCLEEREVSSCDSCCSE 174
              S  S ++ P     D  +F G+       Y  D +N L        +SC S+
Sbjct: 121 QYSSTDSPMLQPHCDQVDSYMFGGSQSSNSYCYSNDSSNELPPLPSDLSNSCYSQ 172

[Close]
BLAST of Csa4G192030 vs. TAIR10
Match: AT2G40220.1 (AT2G40220.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 85.9 bits (211), Expect = 3.5e-17
Identity = 49/121 (40.50%), Postives = 64/121 (52.89%), Query Frame = 1 

Query: 23  KFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACL 82
           K KG+   +N+  ++ GVRQR  G+WVAEI++  K+ R WLGTF TAE+AARAYD AA  
Sbjct: 41  KRKGKGGPDNSKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAVY 100

Query: 83  LRGSNTRTNFIP----QISTNSPIASRIRSLLNTKKTVNRKPPEKPTTSAAVSAGSAVVD 140
           L GS  + N  P     +S++S   S   S   +  +     P  P  +AA   G A   
Sbjct: 101 LYGSRAQLNLTPSSPSSVSSSSSSVSAASSPSTSSSSTQTLRPLLPRPAAATVGGGANFG 160

[Close]
BLAST of Csa4G192030 vs. TAIR10
Match: AT5G18560.1 (AT5G18560.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 84.0 bits (206), Expect = 1.3e-16
Identity = 49/115 (42.61%), Postives = 65/115 (56.52%), Query Frame = 1 

Query: 10  IHRGATASIIKST---KFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTF 69
           IH+  +A+   +T   + +GR        +F+GVR+RP GR+ AEI+D T K R WLGTF
Sbjct: 25  IHQNTSANTTTTTTTGERRGRRSKQAEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTF 84

Query: 70  ETAEEAARAYDEAACLLRGSNTRTNF------IPQISTNSPIASRIRSLLNTKKT 116
           +TA EAA AYD AA  +RG+  RTNF      +  I TN  + S I S  N  ++
Sbjct: 85  DTAHEAALAYDRAALSMRGTQARTNFVYTPTDVHTILTNPNLHSLIVSPYNNNQS 139

[Close]
BLAST of Csa4G192030 vs. NCBI nr
Match: gi|700198773|gb|KGN53931.1| (hypothetical protein Csa_4G192030 [Cucumis sativus])

HSP 1 Score: 452.2 bits (1162), Expect = 5.3e-124
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 1 

Query: 1   MEIDFQSPEIHRGATASIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR 60
           MEIDFQSPEIHRGATASIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR
Sbjct: 1   MEIDFQSPEIHRGATASIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR 60

Query: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKP 120
           MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKP
Sbjct: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKP 120

Query: 121 PEKPTTSAAVSAGSAVVDPSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCELGVS 180
           PEKPTTSAAVSAGSAVVDPSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCELGVS
Sbjct: 121 PEKPTTSAAVSAGSAVVDPSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCELGVS 180

Query: 181 LAENGTVSSEELELCAFERMKVERQISASLYAINGVQENDPCNDS 226
           LAENGTVSSEELELCAFERMKVERQISASLYAINGVQENDPCNDS
Sbjct: 181 LAENGTVSSEELELCAFERMKVERQISASLYAINGVQENDPCNDS 225

[Close]
BLAST of Csa4G192030 vs. NCBI nr
Match: gi|449462796|ref|XP_004149126.1| (PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Cucumis sativus])

HSP 1 Score: 435.3 bits (1118), Expect = 6.7e-119
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 1 

Query: 1   MEIDFQSPEIHRGATASIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR 60
           MEIDFQSPEIHRGATASIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR
Sbjct: 1   MEIDFQSPEIHRGATASIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR 60

Query: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKP 120
           MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKP
Sbjct: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKP 120

Query: 121 PEKPTTSAAVSAGSAVVDPSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCELGVS 180
           PEKPTTSAAVSAGSAVVDPSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCELGVS
Sbjct: 121 PEKPTTSAAVSAGSAVVDPSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCELGVS 180

Query: 181 LAENGTVSSEELELCAFERMKVERQISASLYAINGVQE 219
           LAENGTVSSEELELCAFERMKVERQISASLYAINGVQE
Sbjct: 181 LAENGTVSSEELELCAFERMKVERQISASLYAINGVQE 218

[Close]
BLAST of Csa4G192030 vs. NCBI nr
Match: gi|659082707|ref|XP_008441991.1| (PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Cucumis melo])

HSP 1 Score: 412.9 bits (1060), Expect = 3.6e-112
Identity = 211/219 (96.35%), Postives = 211/219 (96.35%), Query Frame = 1 

Query: 1   MEIDFQSPEIHRGATA-SIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKI 60
           MEIDFQS EIH GATA SIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKI
Sbjct: 1   MEIDFQSSEIHGGATASSIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKI 60

Query: 61  RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRK 120
           RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRK
Sbjct: 61  RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRK 120

Query: 121 PPEKPTTSAAVSAGSAVVDPSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCELGV 180
           P E PTTS A SAGSAVV PSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCELGV
Sbjct: 121 PLETPTTSVAASAGSAVVGPSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCELGV 180

Query: 181 SLAENGTVSSEELELCAFERMKVERQISASLYAINGVQE 219
           SLAENGTVSSEELELCAFERMKVERQISASLYAINGVQE
Sbjct: 181 SLAENGTVSSEELELCAFERMKVERQISASLYAINGVQE 219

[Close]
BLAST of Csa4G192030 vs. NCBI nr
Match: gi|225441591|ref|XP_002281619.1| (PREDICTED: ethylene-responsive transcription factor RAP2-11 [Vitis vinifera])

HSP 1 Score: 235.7 bits (600), Expect = 7.8e-59
Identity = 141/244 (57.79%), Postives = 167/244 (68.44%), Query Frame = 1 

Query: 1   MEIDFQSPEIHRGATASIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR 60
           MEI FQ P+    AT    K  KFKGRNRSN+N NKFVGVRQRPSGRWVAEIKDTT+KIR
Sbjct: 1   MEIQFQQPKGAIPAT----KVRKFKGRNRSNSN-NKFVGVRQRPSGRWVAEIKDTTQKIR 60

Query: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKP 120
           MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIP +S+NSP+ASRIR+LL+ KK    K 
Sbjct: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPNVSSNSPLASRIRTLLDNKK--GAKQ 120

Query: 121 PEK--------------PTTSAAVSAGS-AVVDPSIKDDGLFEGAYKPDMTNCLEEREVS 180
           P++              P  S+  S+GS ++    I++  LF+ AYKPD++NC EE E+ 
Sbjct: 121 PKQTSVDSSNISTTIVTPCASSCTSSGSNSLSSEKIQETQLFDDAYKPDLSNCSEEVELG 180

Query: 181 SCDSCCSESCELG----------VSLAENGTVS-SEELELCAFERMKVERQISASLYAIN 219
           S +S  S     G          + L +NG +  + E E   FERMKVERQISASLYA+N
Sbjct: 181 SSESGLSWGFAAGFDRFSFAQQVLDLPKNGGLQEAAEGEFSEFERMKVERQISASLYAMN 237

[Close]
BLAST of Csa4G192030 vs. NCBI nr
Match: gi|802585450|ref|XP_012070434.1| (PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Jatropha curcas])

HSP 1 Score: 233.0 bits (593), Expect = 5.0e-58
Identity = 131/248 (52.82%), Postives = 162/248 (65.32%), Query Frame = 1 

Query: 1   MEIDFQSPEIHRGATASIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR 60
           MEI FQ  + H+ ++  + K++KFKGR+R NNN NKFVGVRQRPSGRWVAEIKDTT+KIR
Sbjct: 1   MEIQFQQQKQHKSSSVPVNKTSKFKGRHRPNNNNNKFVGVRQRPSGRWVAEIKDTTQKIR 60

Query: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKP 120
           MWLGTFETAEEAARAYDEAACLLRGSNTRTNFI Q+S +SP+ASRIR+LL  KK   ++ 
Sbjct: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFITQVSLDSPLASRIRNLLKNKKAGKKQQ 120

Query: 121 PEK-------------PTTSAAVSAGSAVVDPS------IKDDGLFEGAYKPDMTNCLEE 180
            E+              T++   S+ S+ +D S      + D   F+  YKPDM+NC EE
Sbjct: 121 REEENLEVSTPSNSTVTTSTCTSSSSSSSIDNSTPSGEIVNDTQFFDDVYKPDMSNCREE 180

Query: 181 REVSSCDSCCSESCELG----------VSLAENGTV-SSEELELCAFERMKVERQISASL 219
            E+    S  S     G          +    N  +  + +LE   F+RMKVERQISASL
Sbjct: 181 FELGPFQSDLSWGFGSGLDRFSFTQEVLDFPRNMLLPETSDLEFTEFDRMKVERQISASL 240

The following BLAST results are available for this feature:
BLAST of Csa4G192030 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RA211_ARATH1.9e-3343.19Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana GN=RAP2... [more]
CRF2_ARATH7.4e-1746.00Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE... [more]
LEP_ARATH9.6e-1734.29Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana GN=LEP PE=2... [more]
ABI4_ARATH6.2e-1640.50Ethylene-responsive transcription factor ABI4 OS=Arabidopsis thaliana GN=ABI4 PE... [more]
ERF1_ORYSJ8.1e-1639.37Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=ER... [more]
BLAST of Csa4G192030 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1B8_CUCSA3.7e-124100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G192030 PE=4 SV=1[more]
D7TI77_VITVI5.4e-5957.79Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g07250 PE=4 SV=... [more]
A0A067L5C6_JATCU3.5e-5852.82Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02710 PE=4 SV=1[more]
I1N899_SOYBN4.6e-5853.75Uncharacterized protein OS=Glycine max GN=GLYMA_19G113100 PE=4 SV=2[more]
A0A0B2RSB3_GLYSO4.6e-5853.75Ethylene-responsive transcription factor RAP2-11 OS=Glycine soja GN=glysoja_0112... [more]
BLAST of Csa4G192030 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G19790.11.1e-3443.19 related to AP2 11[more]
AT4G23750.14.1e-1846.00 cytokinin response factor 2[more]
AT5G13910.15.4e-1834.29 Integrase-type DNA-binding superfamily protein[more]
AT2G40220.13.5e-1740.50 Integrase-type DNA-binding superfamily protein[more]
AT5G18560.11.3e-1642.61 Integrase-type DNA-binding superfamily protein[more]
BLAST of Csa4G192030 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700198773|gb|KGN53931.1|5.3e-124100.00hypothetical protein Csa_4G192030 [Cucumis sativus][more]
gi|449462796|ref|XP_004149126.1|6.7e-119100.00PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Cucumis sativu... [more]
gi|659082707|ref|XP_008441991.1|3.6e-11296.35PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Cucumis melo][more]
gi|225441591|ref|XP_002281619.1|7.8e-5957.79PREDICTED: ethylene-responsive transcription factor RAP2-11 [Vitis vinifera][more]
gi|802585450|ref|XP_012070434.1|5.0e-5852.82PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Jatropha curca... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
IPR017392AP2/ERF-transcript_factor
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G192030.1Csa4G192030.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 37..48
score: 6.8E-8coord: 59..75
score: 6.
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 36..92
score: 3.2
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 36..85
score: 2.4
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 36..99
score: 1.3
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 36..93
score: 19
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 36..93
score: 1.63
IPR017392AP2/ERF transcription factor ERF/PTI6PANTHERPTHR31194SHN SHINE , DNA BINDING / TRANSCRIPTION FACTORcoord: 35..218
score: 3.6
NoneNo IPR availablePANTHERPTHR31194:SF5SUBFAMILY NOT NAMEDcoord: 35..218
score: 3.6