Cp4.1LG10g07100 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG10g07100
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionEthylene-responsive transcription factor
LocationCp4.1LG10 : 6125733 .. 6128380 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGTTTTTACGTCAATATGAGTTATATTTTGAACATGGTCAATAGTCGAAATCATATTATTTAACCGTAGTATAATAATAAATTTTAAAAACCGTTCAAAATCTAGAGCAAAGCACAACTTTTAGACTCAGTATTTAACTGAAAAATCTATTTAAAAAGTCAACCAAACATCAAAATGATTTATAACCGAACACTTTAAGTAGTATTCATAACTACAACGTTTTTACCCGGATAAAATACCTTCTAGAAGCCTTAGTCAACCCATAAAATNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTTTAAAATTCAATAATTTTGAATTCCAAAAATTAAAAAAAAAAAATTAAAAGTCAAATCTTTTAATCTCCATTTCACATAAATCCCCAATTCCCAATTTTCCATCAAACAAATATTCTTCTTCTTCAATGGAAATTAACTTCCAGTCGCCGGAGACCCACGGCGGAGCCGCTGTACCAGTGGTCAAAACAAGCAAATTCAAAGGCAAAACCAGAGGGAACAACGGCAACAAGTTCGTCGGAGTCCGGCAGCGGCCGTCGGGCAGATGGGTGGCGGAAATCAAAGACACGACAAGAAAAATCCGAATGTGGTTAGGAACATTCGAGACTGCCGAGGAAGCCGCTCGTGCCTACGATGAAGCCGCCTGTCTTCTCCGAGGTTCGAACACAAGAACTAATTTCTTCATCCCACAAATCTCCACTAATTCCCCAATCGCCTCTCGAATCCGCACCCTTTTAAACAGCAAAAAGCCCCTCGAAAATCCCCCCGCCGCCGCCGCCTCCGCCGCCGTCCCTGCTCCAACAATTCAGGACGGTCGGATGTTTGACGGAGATTATAAACCAGACATGACGAATTGTTCGGAGAAAACAGAGATGGGTTCGTGTTGTTCTTCGGATTCTTGTCGATTTGTTGATGGGTTTTGGAATTCAGAGGATTTGGAGCTTTGTGATTTTGAGAGGATGAAATTTGAGAGGCAAATTTCAGGTTGTTTGTATGCTATGAATGGAGTTCATGAGTATATGGAGGCTGTTCATGAGGCCTCTGAATCCATTTGGGATATTCCTCCGCTCTGTTCGTTGTTCGGTTAATTTGTAGAACAATTCGAAAGGGTATATACGAGCTGGGTTCAGTTGGATTAGCTGGGTGATCGAGCGATTTGAATAGAGTTTACGACCCGACCCACCTTCTATTTTCTGGATTGAGTTGAATTGGGTTGTCCAGTTGTTTTTTTTATTTTATCCAATTTTGTATAGGGATTACGAATATGATCAAGGGCAACCCATGTAAATGGAAGAAAATACGGGCTTGGGCTCTCTGTTAGTTGTATGTAACGTCTCATGTTTAGGATTCATATTTTCAATATCGCTTATGATATGACCATGTTACAAATGGATGCATCTCCCTAACTTCACATCGTTTTGATTAGGGCCTTGTTTTAATCCGTTGAAGGACCCTAGAAGTTCGGGGGATGCTGGTCGAGATGGTGAGACAGCTTCTACACTTTGGTTTTGGAATATTCTTGAGAAAATAGACCCGTTTTTCCTCTTCCTTTTATGATATTTTAGCAGTGGTGTGTTTATCCGGGGTTATTGAAGTTTCCATTACAGATAGGTTGAGAAGTATCTTAAACGAATTACTTGTTTATTGATTCTTATTCAACGAGTTGTTCCCTCGATTGTACGTAAATTAGAGATGTCTAACAGGTGGAGCGAGATAGGGTCTTTCCGTCTTCGGCTCATATTTCAATCCCAATTCTCGCACATTATTTTACTTGTATACAAAATTATATGTAAAAAAATGGGGACAGGGAAGAGACGGGGATGGAGAATTGGAGCAGTGGAAAGTTGTTCACCTCACATGTATTTTTATTTGTAAAATTACCCTTTTGTTCTCTAAATTTTGTGATTTGGTTAGTCTTACTGTTTTAAAATTAAACAACCAACCTAAAGCTTACAAAAATACTCGATTTTATTTAGTAGGGGTATACATTGAACTCAAGAATTCGAACGAACCTAACCTAAATTATAAGAGTTGGGTTAGGCTAGATAGAATTTCAGGTTGGGTTGGGTTGGATTTTTAGAACCCAATCTGATCCGGTTTGGTTACGAGTACAATGTACAAAGGACCAGACCAACCCAACCTAACCCGATTACATAAAAAAAGAAGAAGAAGAAGAAGAAGATACCAAGTTGAGACGAGGCCCAACCTACAATCTTCTGCCTTGGACAACAACCCAGCGCAATATGTTTAGTACTTATGAGGCCAACCCGATTGCTTCTCGAGCCTCCCTGATAGAGCAAGTACACTATACAATACCTACTTGTACTTTCTTCCTTGCACAACGCAGTGAGACTGTCCTCATCAGACATTAGTAAGTACTTCTTCCCTGTCAACGACATGACAATTCCTACTTGCTTCTCGAGTACTTGCCATTGTCATTTGCCAGTCATCTTGCATCGCCACTCTCGTCGGTTGCACCCCTTTCTAGCTTCTACATCTTTTCCCTATTGCAAGTGATCATCTTTCTTTACTCACATAGTGATCCTCTTCCTTCCCGTTTTTTTTTTTTTTTTGTTTAGCTCAACCCGAACCCAATTTCGGATTGA

mRNA sequence

ATGAATTCGCCGGAGACCCACGGCGGAGCCGCTGTACCAGTGGTCAAAACAAGCAAATTCAAAGGCAAAACCAGAGGGAACAACGGCAACAAGTTCGTCGGAGTCCGGCAGCGGCCGTCGGGCAGATGGGTGGCGGAAATCAAAGACACGACAAGAAAAATCCGAATGTGGTTAGGAACATTCGAGACTGCCGAGGAAGCCGCTCGTGCCTACGATGAAGCCGCCTGTCTTCTCCGAGGTTCGAACACAAGAACTAATTTCTTCATCCCACAAATCTCCACTAATTCCCCAATCGCCTCTCGAATCCGCACCCTTTTAAACAGCAAAAAGCCCCTCGAAAATCCCCCCGCCGCCGCCGCCTCCGCCGCCGTCCCTGCTCCAACAATTCAGGACGGTCGGATGTTTGACGGAGATTATAAACCAGACATGACGAATTGTTCGGAGAAAACAGAGATGGGTTCGTGTTGTTCTTCGGATTCTTGTCGATTTGTTGATGGGTTTTGGAATTCAGAGGATTTGGAGCTTTGTGATTTTGAGAGGATGAAATTTGAGAGGCAAATTTCAGGGCCTTGTTTTAATCCGTTGAAGGACCCTAGAAGTTCGGGGGATGCTGGTCGAGATGGTGAGACAGCTTCTACACTTTGGTTTTGGAATATTCTTGAGAAAATAGACCCGGAAGAGACGGGGATGGAGAATTGGAGCAGTGGAAAGTTGTTCACCTCACATCTCAACCCGAACCCAATTTCGGATTGA

Coding sequence (CDS)

ATGAATTCGCCGGAGACCCACGGCGGAGCCGCTGTACCAGTGGTCAAAACAAGCAAATTCAAAGGCAAAACCAGAGGGAACAACGGCAACAAGTTCGTCGGAGTCCGGCAGCGGCCGTCGGGCAGATGGGTGGCGGAAATCAAAGACACGACAAGAAAAATCCGAATGTGGTTAGGAACATTCGAGACTGCCGAGGAAGCCGCTCGTGCCTACGATGAAGCCGCCTGTCTTCTCCGAGGTTCGAACACAAGAACTAATTTCTTCATCCCACAAATCTCCACTAATTCCCCAATCGCCTCTCGAATCCGCACCCTTTTAAACAGCAAAAAGCCCCTCGAAAATCCCCCCGCCGCCGCCGCCTCCGCCGCCGTCCCTGCTCCAACAATTCAGGACGGTCGGATGTTTGACGGAGATTATAAACCAGACATGACGAATTGTTCGGAGAAAACAGAGATGGGTTCGTGTTGTTCTTCGGATTCTTGTCGATTTGTTGATGGGTTTTGGAATTCAGAGGATTTGGAGCTTTGTGATTTTGAGAGGATGAAATTTGAGAGGCAAATTTCAGGGCCTTGTTTTAATCCGTTGAAGGACCCTAGAAGTTCGGGGGATGCTGGTCGAGATGGTGAGACAGCTTCTACACTTTGGTTTTGGAATATTCTTGAGAAAATAGACCCGGAAGAGACGGGGATGGAGAATTGGAGCAGTGGAAAGTTGTTCACCTCACATCTCAACCCGAACCCAATTTCGGATTGA

Protein sequence

MNSPETHGGAAVPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTRKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFFIPQISTNSPIASRIRTLLNSKKPLENPPAAAASAAVPAPTIQDGRMFDGDYKPDMTNCSEKTEMGSCCSSDSCRFVDGFWNSEDLELCDFERMKFERQISGPCFNPLKDPRSSGDAGRDGETASTLWFWNILEKIDPEETGMENWSSGKLFTSHLNPNPISD
Homology
[Close]
BLAST of Cp4.1LG10g07100 vs. Swiss-Prot
Match: RA211_ARATH (Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana GN=RAP2-11 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 5.4e-29
Identity = 67/95 (70.53%), Postives = 78/95 (82.11%), Query Frame = 1 

Query: 19  KFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTRKIRMWLGTFETAEEAARAYDEAACLL 78
           K K K++GN   KFVGVRQRPSG+WVAEIKDTT+KIRMWLGTFETAEEAARAYDEAACLL
Sbjct: 10  KTKEKSKGNK-TKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLL 69

Query: 79  RGSNTRTNFFIPQISTNSPIASRIRTLLNSKKPLE 114
           RGSNTRTN F      NS ++ +IR LL+ K+ ++
Sbjct: 70  RGSNTRTN-FANHFPNNSQLSLKIRNLLHQKQSMK 102

[Close]
BLAST of Cp4.1LG10g07100 vs. Swiss-Prot
Match: LEP_ARATH (Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana GN=LEP PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 4.0e-16
Identity = 49/109 (44.95%), Postives = 68/109 (62.39%), Query Frame = 1 

Query: 17  TSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTRKIRMWLGTFETAEEAARAYDEAAC 76
           +SK K K     G +F+GVR+RP GR+ AEI+D T K R WLGTF+TAEEAA AYD AA 
Sbjct: 5   SSKSKKKQDDQVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAALAYDRAAR 64

Query: 77  LLRGSNTRTNFFIPQISTNSPIASRIRTLLNSKKPLENPPAAAASAAVP 126
            +RG+  RTNF    + ++ P +S + ++++   P   PP  A  +  P
Sbjct: 65  SMRGTRARTNF----VYSDMPPSSSVTSIVSPDDPPPPPPPPAPPSNDP 109

[Close]
BLAST of Cp4.1LG10g07100 vs. Swiss-Prot
Match: CRF1_ARATH (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 5.3e-16
Identity = 46/89 (51.69%), Postives = 57/89 (64.04%), Query Frame = 1 

Query: 12  VPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTRKIRMWLGTFETAEEAARAY 71
           VPVV T+  +         KF GVRQRP G+W AEI+D +R++R+WLGTF+TAEEAA  Y
Sbjct: 76  VPVVVTTATR---------KFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVY 135

Query: 72  DEAACLLRGSNTRTNFFIPQISTNSPIAS 101
           D AA  LRG N   NF  P ++ N   AS
Sbjct: 136 DNAAIQLRGPNAELNFPPPPVTENVEEAS 155

[Close]
BLAST of Cp4.1LG10g07100 vs. Swiss-Prot
Match: ERF76_ARATH (Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana GN=ERF11 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.4e-15
Identity = 53/123 (43.09%), Postives = 73/123 (59.35%), Query Frame = 1 

Query: 13  PVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTRKIRMWLGTFETAEEAARAYD 72
           P VKT+  K  T   NG ++ GVR+RP GR+ AEI+D  +K R+WLGTF+T EEAARAYD
Sbjct: 3   PTVKTAAVK--TNEGNGVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYD 62

Query: 73  EAACLLRGSNTRTNFFIPQISTNSPIASRIRTL-----LNSKKPLENPPAAAASAAVPAP 131
           + A   RG+  +TNF  P  + N+   S  ++L     + S  P  N  + + S+  P P
Sbjct: 63  KRAIEFRGAKAKTNF--PCYNINAHCLSLTQSLSQSSTVESSFPNLNLGSDSVSSRFPFP 121

[Close]
BLAST of Cp4.1LG10g07100 vs. Swiss-Prot
Match: ERF84_ARATH (Ethylene-responsive transcription factor ERF084 OS=Arabidopsis thaliana GN=ERF084 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.8e-15
Identity = 40/72 (55.56%), Postives = 50/72 (69.44%), Query Frame = 1 

Query: 21  KGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTRKIRMWLGTFETAEEAARAYDEAACLLRG 80
           +G+        F+GVR+RP GRW AEI+D   + R WLGTF+TAEEAARAYD AA  LRG
Sbjct: 105 RGRKMPQKTGGFMGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRG 164

Query: 81  SNTRTNFFIPQI 93
           +  +TNF IP +
Sbjct: 165 TKAKTNFVIPPL 176

[Close]
BLAST of Cp4.1LG10g07100 vs. TrEMBL
Match: A0A0A0L1B8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G192030 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 2.4e-63
Identity = 135/206 (65.53%), Postives = 157/206 (76.21%), Query Frame = 1 

Query: 3   SPETHGGAAVPVVKTSKFKGKTRGNN-GNKFVGVRQRPSGRWVAEIKDTTRKIRMWLGTF 62
           SPE H GA   ++K++KFKG+ R NN GNKFVGVRQRPSGRWVAEIKDTT+KIRMWLGTF
Sbjct: 7   SPEIHRGATASIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTF 66

Query: 63  ETAEEAARAYDEAACLLRGSNTRTNFFIPQISTNSPIASRIRTLLNSKKPLENPP----- 122
           ETAEEAARAYDEAACLLRGSNTRTN FIPQISTNSPIASRIR+LLN+KK +   P     
Sbjct: 67  ETAEEAARAYDEAACLLRGSNTRTN-FIPQISTNSPIASRIRSLLNTKKTVNRKPPEKPT 126

Query: 123 ---AAAASAAVPAPTIQDGRMFDGDYKPDMTNCSEKTEMGSC--CSSDSCRF-----VDG 182
              A +A +AV  P+I+D  +F+G YKPDMTNC E+ E+ SC  C S+SC        +G
Sbjct: 127 TSAAVSAGSAVVDPSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCELGVSLAENG 186

Query: 183 FWNSEDLELCDFERMKFERQISGPCF 193
             +SE+LELC FERMK ERQIS   +
Sbjct: 187 TVSSEELELCAFERMKVERQISASLY 211

[Close]
BLAST of Cp4.1LG10g07100 vs. TrEMBL
Match: D7TI77_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g07250 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 5.3e-47
Identity = 106/178 (59.55%), Postives = 128/178 (71.91%), Query Frame = 1 

Query: 11  AVPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTRKIRMWLGTFETAEEAARA 70
           A+P  K  KFKG+ R N+ NKFVGVRQRPSGRWVAEIKDTT+KIRMWLGTFETAEEAARA
Sbjct: 11  AIPATKVRKFKGRNRSNSNNKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARA 70

Query: 71  YDEAACLLRGSNTRTNFFIPQISTNSPIASRIRTLLNSKKPLENP--------------- 130
           YDEAACLLRGSNTRTNF IP +S+NSP+ASRIRTLL++KK  + P               
Sbjct: 71  YDEAACLLRGSNTRTNF-IPNVSSNSPLASRIRTLLDNKKGAKQPKQTSVDSSNISTTIV 130

Query: 131 -PAAAA-----SAAVPAPTIQDGRMFDGDYKPDMTNCSEKTEMGSCCSSDSCRFVDGF 168
            P A++     S ++ +  IQ+ ++FD  YKPD++NCSE+ E+GS  S  S  F  GF
Sbjct: 131 TPCASSCTSSGSNSLSSEKIQETQLFDDAYKPDLSNCSEEVELGSSESGLSWGFAAGF 187

[Close]
BLAST of Cp4.1LG10g07100 vs. TrEMBL
Match: A0A067L5C6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02710 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.4e-44
Identity = 116/232 (50.00%), Postives = 139/232 (59.91%), Query Frame = 1 

Query: 7   HGGAAVPVVKTSKFKGKTR-GNNGNKFVGVRQRPSGRWVAEIKDTTRKIRMWLGTFETAE 66
           H  ++VPV KTSKFKG+ R  NN NKFVGVRQRPSGRWVAEIKDTT+KIRMWLGTFETAE
Sbjct: 11  HKSSSVPVNKTSKFKGRHRPNNNNNKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAE 70

Query: 67  EAARAYDEAACLLRGSNTRTNFFIPQISTNSPIASRIRTLL------------------- 126
           EAARAYDEAACLLRGSNTRTNF I Q+S +SP+ASRIR LL                   
Sbjct: 71  EAARAYDEAACLLRGSNTRTNF-ITQVSLDSPLASRIRNLLKNKKAGKKQQREEENLEVS 130

Query: 127 ---NSKKPLENPPAAAASAAVPAPT-----IQDGRMFDGDYKPDMTNCSEKTEMGSCCSS 186
              NS        ++++S+++   T     + D + FD  YKPDM+NC E+ E+G   S 
Sbjct: 131 TPSNSTVTTSTCTSSSSSSSIDNSTPSGEIVNDTQFFDDVYKPDMSNCREEFELGPFQSD 190

Query: 187 DSCRFVDG------------------FWNSEDLELCDFERMKFERQISGPCF 193
            S  F  G                     + DLE  +F+RMK ERQIS   +
Sbjct: 191 LSWGFGSGLDRFSFTQEVLDFPRNMLLPETSDLEFTEFDRMKVERQISASLY 241

[Close]
BLAST of Cp4.1LG10g07100 vs. TrEMBL
Match: A0A151TQV7_CAJCA (Ethylene-responsive transcription factor RAP2-11 OS=Cajanus cajan GN=KK1_008632 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 9.3e-44
Identity = 115/222 (51.80%), Postives = 137/222 (61.71%), Query Frame = 1 

Query: 7   HGGAAVPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTRKIRMWLGTFETAEE 66
           H  A + + K  KFKG++R NN NKFVGVRQRPSGRWVAEIKDTT+KIRMWLGTFETAEE
Sbjct: 12  HQKAGIAITKGGKFKGRSRNNNTNKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEE 71

Query: 67  AARAYDEAACLLRGSNTRTNFFIPQISTNSPIASRIRTLLNSKKPLE-------NPP--- 126
           AARAYDEAACLLRGSNTRTN FI  +S +SP+ASRIR LLN++K ++       N P   
Sbjct: 72  AARAYDEAACLLRGSNTRTN-FITHVSLDSPLASRIRNLLNNRKGIKKEEDSNANAPRVS 131

Query: 127 ---AAAASAAVPAPTIQDG-----------------------RMFDGDYKPDMTNCSEKT 186
              +A+A A+  A T                            +FD  YKPD++NC E+ 
Sbjct: 132 TISSASAGASTSASTNTSTNSSSDNDNNNNNKSLSNVATQSSNLFDDAYKPDLSNCREEY 191

Query: 187 EMGSCCSSDSCRFVDGFWNSEDLELCDFERMKFERQISGPCF 193
           E  S  S+ S  F   F    D EL +FERMK ERQIS   +
Sbjct: 192 E-SSHQSNASWGFGPVF--DPDFELSEFERMKVERQISASLY 229

[Close]
BLAST of Cp4.1LG10g07100 vs. TrEMBL
Match: I1N899_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G113100 PE=4 SV=2)

HSP 1 Score: 182.6 bits (462), Expect = 6.0e-43
Identity = 112/235 (47.66%), Postives = 138/235 (58.72%), Query Frame = 1 

Query: 7   HGGAAVPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTRKIRMWLGTFETAEE 66
           H  + + + K  KFKG++R NN NKFVGVRQRPSGRWVAEIKDTT+KIRMWLGTFETAEE
Sbjct: 12  HQKSGIAITKGGKFKGRSRNNNTNKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEE 71

Query: 67  AARAYDEAACLLRGSNTRTNFFIPQISTNSPIASRIRTLLNSKKPLENPPAAAASA-AVP 126
           AARAYDEAACLLRGSNTRTN FI  +S +SP+ASRIR LLN++K ++    A A+A   P
Sbjct: 72  AARAYDEAACLLRGSNTRTN-FITHVSLDSPLASRIRNLLNNRKGIKKEEDANANANNAP 131

Query: 127 APTIQ----------DGRMFDGD---------------------YKPDMTNCSEKTEMGS 186
           AP +                +G+                     YKPD++NC E+ E G 
Sbjct: 132 APRVSTTSSATSTGTSSNSSNGNDNNDQSLSTVTTQSSNLFDDAYKPDLSNCREEFESGH 191

Query: 187 CCSSDSC--RFVDGF---------------WNSEDLELCDFERMKFERQISGPCF 193
             ++  C     D F                N+ DL+L +FERMK ERQIS   +
Sbjct: 192 QSNTSWCFGPVFDRFPMAQIFDIPKIDDGLTNAADLDLSEFERMKVERQISASLY 245

[Close]
BLAST of Cp4.1LG10g07100 vs. TAIR10
Match: AT5G19790.1 (AT5G19790.1 related to AP2 11)

HSP 1 Score: 129.4 bits (324), Expect = 3.1e-30
Identity = 67/95 (70.53%), Postives = 78/95 (82.11%), Query Frame = 1 

Query: 19  KFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTRKIRMWLGTFETAEEAARAYDEAACLL 78
           K K K++GN   KFVGVRQRPSG+WVAEIKDTT+KIRMWLGTFETAEEAARAYDEAACLL
Sbjct: 10  KTKEKSKGNK-TKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLL 69

Query: 79  RGSNTRTNFFIPQISTNSPIASRIRTLLNSKKPLE 114
           RGSNTRTN F      NS ++ +IR LL+ K+ ++
Sbjct: 70  RGSNTRTN-FANHFPNNSQLSLKIRNLLHQKQSMK 102

[Close]
BLAST of Cp4.1LG10g07100 vs. TAIR10
Match: AT5G13910.1 (AT5G13910.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 86.7 bits (213), Expect = 2.3e-17
Identity = 49/109 (44.95%), Postives = 68/109 (62.39%), Query Frame = 1 

Query: 17  TSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTRKIRMWLGTFETAEEAARAYDEAAC 76
           +SK K K     G +F+GVR+RP GR+ AEI+D T K R WLGTF+TAEEAA AYD AA 
Sbjct: 5   SSKSKKKQDDQVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAALAYDRAAR 64

Query: 77  LLRGSNTRTNFFIPQISTNSPIASRIRTLLNSKKPLENPPAAAASAAVP 126
            +RG+  RTNF    + ++ P +S + ++++   P   PP  A  +  P
Sbjct: 65  SMRGTRARTNF----VYSDMPPSSSVTSIVSPDDPPPPPPPPAPPSNDP 109

[Close]
BLAST of Cp4.1LG10g07100 vs. TAIR10
Match: AT4G11140.1 (AT4G11140.1 cytokinin response factor 1)

HSP 1 Score: 86.3 bits (212), Expect = 3.0e-17
Identity = 46/89 (51.69%), Postives = 57/89 (64.04%), Query Frame = 1 

Query: 12  VPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTRKIRMWLGTFETAEEAARAY 71
           VPVV T+  +         KF GVRQRP G+W AEI+D +R++R+WLGTF+TAEEAA  Y
Sbjct: 76  VPVVVTTATR---------KFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVY 135

Query: 72  DEAACLLRGSNTRTNFFIPQISTNSPIAS 101
           D AA  LRG N   NF  P ++ N   AS
Sbjct: 136 DNAAIQLRGPNAELNFPPPPVTENVEEAS 155

[Close]
BLAST of Cp4.1LG10g07100 vs. TAIR10
Match: AT1G28370.1 (AT1G28370.1 ERF domain protein 11)

HSP 1 Score: 83.6 bits (205), Expect = 1.9e-16
Identity = 53/123 (43.09%), Postives = 73/123 (59.35%), Query Frame = 1 

Query: 13  PVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTRKIRMWLGTFETAEEAARAYD 72
           P VKT+  K  T   NG ++ GVR+RP GR+ AEI+D  +K R+WLGTF+T EEAARAYD
Sbjct: 3   PTVKTAAVK--TNEGNGVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYD 62

Query: 73  EAACLLRGSNTRTNFFIPQISTNSPIASRIRTL-----LNSKKPLENPPAAAASAAVPAP 131
           + A   RG+  +TNF  P  + N+   S  ++L     + S  P  N  + + S+  P P
Sbjct: 63  KRAIEFRGAKAKTNF--PCYNINAHCLSLTQSLSQSSTVESSFPNLNLGSDSVSSRFPFP 121

[Close]
BLAST of Cp4.1LG10g07100 vs. TAIR10
Match: AT1G80580.1 (AT1G80580.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 82.8 bits (203), Expect = 3.3e-16
Identity = 40/72 (55.56%), Postives = 50/72 (69.44%), Query Frame = 1 

Query: 21  KGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTRKIRMWLGTFETAEEAARAYDEAACLLRG 80
           +G+        F+GVR+RP GRW AEI+D   + R WLGTF+TAEEAARAYD AA  LRG
Sbjct: 105 RGRKMPQKTGGFMGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRG 164

Query: 81  SNTRTNFFIPQI 93
           +  +TNF IP +
Sbjct: 165 TKAKTNFVIPPL 176

[Close]
BLAST of Cp4.1LG10g07100 vs. NCBI nr
Match: gi|659082707|ref|XP_008441991.1| (PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Cucumis melo])

HSP 1 Score: 250.8 bits (639), Expect = 2.6e-63
Identity = 140/207 (67.63%), Postives = 161/207 (77.78%), Query Frame = 1 

Query: 3   SPETHGGA-AVPVVKTSKFKGKTRGNN-GNKFVGVRQRPSGRWVAEIKDTTRKIRMWLGT 62
           S E HGGA A  ++K++KFKG+ R NN GNKFVGVRQRPSGRWVAEIKDTT+KIRMWLGT
Sbjct: 7   SSEIHGGATASSIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIRMWLGT 66

Query: 63  FETAEEAARAYDEAACLLRGSNTRTNFFIPQISTNSPIASRIRTLLNSK-----KPLENP 122
           FETAEEAARAYDEAACLLRGSNTRTN FIPQISTNSPIASRIR+LLN+K     KPLE P
Sbjct: 67  FETAEEAARAYDEAACLLRGSNTRTN-FIPQISTNSPIASRIRSLLNTKKTVNRKPLETP 126

Query: 123 P---AAAASAAVPAPTIQDGRMFDGDYKPDMTNCSEKTEMGSC--CSSDSCRF-----VD 182
               AA+A +AV  P+I+D  +F+G YKPDMTNC E+ E+ SC  C S+SC        +
Sbjct: 127 TTSVAASAGSAVVGPSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCELGVSLAEN 186

Query: 183 GFWNSEDLELCDFERMKFERQISGPCF 193
           G  +SE+LELC FERMK ERQIS   +
Sbjct: 187 GTVSSEELELCAFERMKVERQISASLY 212

[Close]
BLAST of Cp4.1LG10g07100 vs. NCBI nr
Match: gi|449462796|ref|XP_004149126.1| (PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Cucumis sativus])

HSP 1 Score: 250.4 bits (638), Expect = 3.4e-63
Identity = 135/206 (65.53%), Postives = 157/206 (76.21%), Query Frame = 1 

Query: 3   SPETHGGAAVPVVKTSKFKGKTRGNN-GNKFVGVRQRPSGRWVAEIKDTTRKIRMWLGTF 62
           SPE H GA   ++K++KFKG+ R NN GNKFVGVRQRPSGRWVAEIKDTT+KIRMWLGTF
Sbjct: 7   SPEIHRGATASIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTF 66

Query: 63  ETAEEAARAYDEAACLLRGSNTRTNFFIPQISTNSPIASRIRTLLNSKKPLENPP----- 122
           ETAEEAARAYDEAACLLRGSNTRTN FIPQISTNSPIASRIR+LLN+KK +   P     
Sbjct: 67  ETAEEAARAYDEAACLLRGSNTRTN-FIPQISTNSPIASRIRSLLNTKKTVNRKPPEKPT 126

Query: 123 ---AAAASAAVPAPTIQDGRMFDGDYKPDMTNCSEKTEMGSC--CSSDSCRF-----VDG 182
              A +A +AV  P+I+D  +F+G YKPDMTNC E+ E+ SC  C S+SC        +G
Sbjct: 127 TSAAVSAGSAVVDPSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCELGVSLAENG 186

Query: 183 FWNSEDLELCDFERMKFERQISGPCF 193
             +SE+LELC FERMK ERQIS   +
Sbjct: 187 TVSSEELELCAFERMKVERQISASLY 211

[Close]
BLAST of Cp4.1LG10g07100 vs. NCBI nr
Match: gi|700198773|gb|KGN53931.1| (hypothetical protein Csa_4G192030 [Cucumis sativus])

HSP 1 Score: 250.4 bits (638), Expect = 3.4e-63
Identity = 135/206 (65.53%), Postives = 157/206 (76.21%), Query Frame = 1 

Query: 3   SPETHGGAAVPVVKTSKFKGKTRGNN-GNKFVGVRQRPSGRWVAEIKDTTRKIRMWLGTF 62
           SPE H GA   ++K++KFKG+ R NN GNKFVGVRQRPSGRWVAEIKDTT+KIRMWLGTF
Sbjct: 7   SPEIHRGATASIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTF 66

Query: 63  ETAEEAARAYDEAACLLRGSNTRTNFFIPQISTNSPIASRIRTLLNSKKPLENPP----- 122
           ETAEEAARAYDEAACLLRGSNTRTN FIPQISTNSPIASRIR+LLN+KK +   P     
Sbjct: 67  ETAEEAARAYDEAACLLRGSNTRTN-FIPQISTNSPIASRIRSLLNTKKTVNRKPPEKPT 126

Query: 123 ---AAAASAAVPAPTIQDGRMFDGDYKPDMTNCSEKTEMGSC--CSSDSCRF-----VDG 182
              A +A +AV  P+I+D  +F+G YKPDMTNC E+ E+ SC  C S+SC        +G
Sbjct: 127 TSAAVSAGSAVVDPSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCELGVSLAENG 186

Query: 183 FWNSEDLELCDFERMKFERQISGPCF 193
             +SE+LELC FERMK ERQIS   +
Sbjct: 187 TVSSEELELCAFERMKVERQISASLY 211

[Close]
BLAST of Cp4.1LG10g07100 vs. NCBI nr
Match: gi|225441591|ref|XP_002281619.1| (PREDICTED: ethylene-responsive transcription factor RAP2-11 [Vitis vinifera])

HSP 1 Score: 196.1 bits (497), Expect = 7.6e-47
Identity = 106/178 (59.55%), Postives = 128/178 (71.91%), Query Frame = 1 

Query: 11  AVPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTRKIRMWLGTFETAEEAARA 70
           A+P  K  KFKG+ R N+ NKFVGVRQRPSGRWVAEIKDTT+KIRMWLGTFETAEEAARA
Sbjct: 11  AIPATKVRKFKGRNRSNSNNKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARA 70

Query: 71  YDEAACLLRGSNTRTNFFIPQISTNSPIASRIRTLLNSKKPLENP--------------- 130
           YDEAACLLRGSNTRTNF IP +S+NSP+ASRIRTLL++KK  + P               
Sbjct: 71  YDEAACLLRGSNTRTNF-IPNVSSNSPLASRIRTLLDNKKGAKQPKQTSVDSSNISTTIV 130

Query: 131 -PAAAA-----SAAVPAPTIQDGRMFDGDYKPDMTNCSEKTEMGSCCSSDSCRFVDGF 168
            P A++     S ++ +  IQ+ ++FD  YKPD++NCSE+ E+GS  S  S  F  GF
Sbjct: 131 TPCASSCTSSGSNSLSSEKIQETQLFDDAYKPDLSNCSEEVELGSSESGLSWGFAAGF 187

[Close]
BLAST of Cp4.1LG10g07100 vs. NCBI nr
Match: gi|802585450|ref|XP_012070434.1| (PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Jatropha curcas])

HSP 1 Score: 188.0 bits (476), Expect = 2.1e-44
Identity = 116/232 (50.00%), Postives = 139/232 (59.91%), Query Frame = 1 

Query: 7   HGGAAVPVVKTSKFKGKTR-GNNGNKFVGVRQRPSGRWVAEIKDTTRKIRMWLGTFETAE 66
           H  ++VPV KTSKFKG+ R  NN NKFVGVRQRPSGRWVAEIKDTT+KIRMWLGTFETAE
Sbjct: 11  HKSSSVPVNKTSKFKGRHRPNNNNNKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAE 70

Query: 67  EAARAYDEAACLLRGSNTRTNFFIPQISTNSPIASRIRTLL------------------- 126
           EAARAYDEAACLLRGSNTRTNF I Q+S +SP+ASRIR LL                   
Sbjct: 71  EAARAYDEAACLLRGSNTRTNF-ITQVSLDSPLASRIRNLLKNKKAGKKQQREEENLEVS 130

Query: 127 ---NSKKPLENPPAAAASAAVPAPT-----IQDGRMFDGDYKPDMTNCSEKTEMGSCCSS 186
              NS        ++++S+++   T     + D + FD  YKPDM+NC E+ E+G   S 
Sbjct: 131 TPSNSTVTTSTCTSSSSSSSIDNSTPSGEIVNDTQFFDDVYKPDMSNCREEFELGPFQSD 190

Query: 187 DSCRFVDG------------------FWNSEDLELCDFERMKFERQISGPCF 193
            S  F  G                     + DLE  +F+RMK ERQIS   +
Sbjct: 191 LSWGFGSGLDRFSFTQEVLDFPRNMLLPETSDLEFTEFDRMKVERQISASLY 241

The following BLAST results are available for this feature:
BLAST of Cp4.1LG10g07100 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RA211_ARATH5.4e-2970.53Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana GN=RAP2... [more]
LEP_ARATH4.0e-1644.95Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana GN=LEP PE=2... [more]
CRF1_ARATH5.3e-1651.69Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE... [more]
ERF76_ARATH3.4e-1543.09Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana GN=ERF11 PE=... [more]
ERF84_ARATH5.8e-1555.56Ethylene-responsive transcription factor ERF084 OS=Arabidopsis thaliana GN=ERF08... [more]
BLAST of Cp4.1LG10g07100 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1B8_CUCSA2.4e-6365.53Uncharacterized protein OS=Cucumis sativus GN=Csa_4G192030 PE=4 SV=1[more]
D7TI77_VITVI5.3e-4759.55Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g07250 PE=4 SV=... [more]
A0A067L5C6_JATCU1.4e-4450.00Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02710 PE=4 SV=1[more]
A0A151TQV7_CAJCA9.3e-4451.80Ethylene-responsive transcription factor RAP2-11 OS=Cajanus cajan GN=KK1_008632 ... [more]
I1N899_SOYBN6.0e-4347.66Uncharacterized protein OS=Glycine max GN=GLYMA_19G113100 PE=4 SV=2[more]
BLAST of Cp4.1LG10g07100 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G19790.13.1e-3070.53 related to AP2 11[more]
AT5G13910.12.3e-1744.95 Integrase-type DNA-binding superfamily protein[more]
AT4G11140.13.0e-1751.69 cytokinin response factor 1[more]
AT1G28370.11.9e-1643.09 ERF domain protein 11[more]
AT1G80580.13.3e-1655.56 Integrase-type DNA-binding superfamily protein[more]
BLAST of Cp4.1LG10g07100 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659082707|ref|XP_008441991.1|2.6e-6367.63PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Cucumis melo][more]
gi|449462796|ref|XP_004149126.1|3.4e-6365.53PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Cucumis sativu... [more]
gi|700198773|gb|KGN53931.1|3.4e-6365.53hypothetical protein Csa_4G192030 [Cucumis sativus][more]
gi|225441591|ref|XP_002281619.1|7.6e-4759.55PREDICTED: ethylene-responsive transcription factor RAP2-11 [Vitis vinifera][more]
gi|802585450|ref|XP_012070434.1|2.1e-4450.00PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Jatropha curca... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR017392AP2/ERF-transcript_factor
IPR016177DNA-bd_dom_sf
IPR001471AP2/ERF_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g07100.1Cp4.1LG10g07100.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 32..43
score: 8.0E-8coord: 54..70
score: 8.
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 31..87
score: 5.8
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 31..80
score: 3.0
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 31..94
score: 1.0
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 31..88
score: 19
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 31..88
score: 3.14
IPR017392AP2/ERF transcription factor ERF/PTI6PANTHERPTHR31194SHN SHINE , DNA BINDING / TRANSCRIPTION FACTORcoord: 30..188
score: 3.7
NoneNo IPR availablePANTHERPTHR31194:SF5SUBFAMILY NOT NAMEDcoord: 30..188
score: 3.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG10g07100Cucsa.334870Cucumber (Gy14) v1cgycpeB0874
Cp4.1LG10g07100CmaCh03G002370Cucurbita maxima (Rimu)cmacpeB656
Cp4.1LG10g07100CmaCh07G011600Cucurbita maxima (Rimu)cmacpeB867
Cp4.1LG10g07100CmoCh03G002510Cucurbita moschata (Rifu)cmocpeB606
Cp4.1LG10g07100CmoCh07G012070Cucurbita moschata (Rifu)cmocpeB804
Cp4.1LG10g07100Csa4G192030Cucumber (Chinese Long) v2cpecuB079
Cp4.1LG10g07100MELO3C008810Melon (DHL92) v3.5.1cpemeB067
Cp4.1LG10g07100CSPI04G11180Wild cucumber (PI 183967)cpecpiB073
Cp4.1LG10g07100MELO3C008810.2Melon (DHL92) v3.6.1cpemedB088
Cp4.1LG10g07100CsaV3_4G012210Cucumber (Chinese Long) v3cpecucB0083
Cp4.1LG10g07100CsGy4G010740Cucumber (Gy14) v2cgybcpeB473
Cp4.1LG10g07100Carg19567Silver-seed gourdcarcpeB0891
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG10g07100Cucurbita pepo (Zucchini)cpecpeB077
Cp4.1LG10g07100Cucumber (Gy14) v1cgycpeB0905
Cp4.1LG10g07100Cucurbita maxima (Rimu)cmacpeB864
Cp4.1LG10g07100Cucurbita moschata (Rifu)cmocpeB807
Cp4.1LG10g07100Wild cucumber (PI 183967)cpecpiB076
Cp4.1LG10g07100Bottle gourd (USVL1VR-Ls)cpelsiB048
Cp4.1LG10g07100Watermelon (Charleston Gray)cpewcgB072
Cp4.1LG10g07100Watermelon (97103) v1cpewmB079
Cp4.1LG10g07100Melon (DHL92) v3.5.1cpemeB070
Cp4.1LG10g07100Cucumber (Gy14) v2cgybcpeB472
Cp4.1LG10g07100Melon (DHL92) v3.6.1cpemedB089
Cp4.1LG10g07100Silver-seed gourdcarcpeB0399
Cp4.1LG10g07100Cucumber (Chinese Long) v3cpecucB0085
Cp4.1LG10g07100Wax gourdcpewgoB0085