CSPI04G11180 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G11180
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionEthylene-responsive transcription factor
LocationChr4 : 9479652 .. 9480377 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATTGACTTCCAGTCGCCGGAGATCCACCGCGGAGCCACCGCGTCCATAATAAAATCAACCAAATTCAAAGCCAGAAACAGAAGTAACAATAATGGCAACAAGTTCGTCGGAGTCCGGCAACGGCCGTCCGGCAGATGGGTAGCGGAAATCAAAGACACAACGAAGAAAATTCGAATGTGGCTCGGAACTTTCGAGACCGCCGAAGAAGCCGCCCGTGCTTACGATGAAGCCGCTTGTCTTCTTCGAGGTTCGAACACAAGAACCAATTTCATTCCTCAAATCTCAACAAATTCCCCAATCGCTTCTCGGATTCGTTCTCTCTTAAACACCAAAAAGACCGTAAATCGAAAACCCCCGGAAAAACCCACCACTTCCGCCGCCGTCTCTGCCGGTTCCGCCGTCGTGGACCCGTCAATTAAAGACGATGGATTGTTCGAGGGAGCGTATAAACCGGATATGACTAATTGTTTGGAAGAAAGAGAGGTGAGTTCTTGTGATTCGTGTTGCTCTGAATCTTGTGAATTGGGGGTTTCATTGGCGGAGAATGGGACAGTGAGTTCAGAGGAATTGGAGTTGTGTGCTTTTGAGAGAATGAAAGTTGAGAGACAAATTTCAGCCTCTTTGTATGCTATTAATGGAGTTCAAGAGTATATGGAGGCTGTTCATGAAGCTTCTGAACCCATTTGGGATCTTCCACCACTCTGTTCTTTGTTCTGTTGA

mRNA sequence

ATGGAAATTGACTTCCAGTCGCCGGAGATCCACCGCGGAGCCACCGCGTCCATAATAAAATCAACCAAATTCAAAGCCAGAAACAGAAGTAACAATAATGGCAACAAGTTCGTCGGAGTCCGGCAACGGCCGTCCGGCAGATGGGTAGCGGAAATCAAAGACACAACGAAGAAAATTCGAATGTGGCTCGGAACTTTCGAGACCGCCGAAGAAGCCGCCCGTGCTTACGATGAAGCCGCTTGTCTTCTTCGAGGTTCGAACACAAGAACCAATTTCATTCCTCAAATCTCAACAAATTCCCCAATCGCTTCTCGGATTCGTTCTCTCTTAAACACCAAAAAGACCGTAAATCGAAAACCCCCGGAAAAACCCACCACTTCCGCCGCCGTCTCTGCCGGTTCCGCCGTCGTGGACCCGTCAATTAAAGACGATGGATTGTTCGAGGGAGCGTATAAACCGGATATGACTAATTGTTTGGAAGAAAGAGAGGTGAGTTCTTGTGATTCGTGTTGCTCTGAATCTTGTGAATTGGGGGTTTCATTGGCGGAGAATGGGACAGTGAGTTCAGAGGAATTGGAGTTGTGTGCTTTTGAGAGAATGAAAGTTGAGAGACAAATTTCAGCCTCTTTGTATGCTATTAATGGAGTTCAAGAGTATATGGAGGCTGTTCATGAAGCTTCTGAACCCATTTGGGATCTTCCACCACTCTGTTCTTTGTTCTGTTGA

Coding sequence (CDS)

ATGGAAATTGACTTCCAGTCGCCGGAGATCCACCGCGGAGCCACCGCGTCCATAATAAAATCAACCAAATTCAAAGCCAGAAACAGAAGTAACAATAATGGCAACAAGTTCGTCGGAGTCCGGCAACGGCCGTCCGGCAGATGGGTAGCGGAAATCAAAGACACAACGAAGAAAATTCGAATGTGGCTCGGAACTTTCGAGACCGCCGAAGAAGCCGCCCGTGCTTACGATGAAGCCGCTTGTCTTCTTCGAGGTTCGAACACAAGAACCAATTTCATTCCTCAAATCTCAACAAATTCCCCAATCGCTTCTCGGATTCGTTCTCTCTTAAACACCAAAAAGACCGTAAATCGAAAACCCCCGGAAAAACCCACCACTTCCGCCGCCGTCTCTGCCGGTTCCGCCGTCGTGGACCCGTCAATTAAAGACGATGGATTGTTCGAGGGAGCGTATAAACCGGATATGACTAATTGTTTGGAAGAAAGAGAGGTGAGTTCTTGTGATTCGTGTTGCTCTGAATCTTGTGAATTGGGGGTTTCATTGGCGGAGAATGGGACAGTGAGTTCAGAGGAATTGGAGTTGTGTGCTTTTGAGAGAATGAAAGTTGAGAGACAAATTTCAGCCTCTTTGTATGCTATTAATGGAGTTCAAGAGTATATGGAGGCTGTTCATGAAGCTTCTGAACCCATTTGGGATCTTCCACCACTCTGTTCTTTGTTCTGTTGA
Homology
[Close]
BLAST of CSPI04G11180 vs. Swiss-Prot
Match: RA211_ARATH (Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana GN=RAP2-11 PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 3.6e-38
Identity = 104/245 (42.45%), Postives = 143/245 (58.37%), Query Frame = 1 

Query: 23  KFKARNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACL 82
           K K + +S  N  KFVGVRQRPSG+WVAEIKDTT+KIRMWLGTFETAEEAARAYDEAACL
Sbjct: 8   KQKTKEKSKGNKTKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACL 67

Query: 83  LRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKPPE--KPTTSAA------VSAGS 142
           LRGSNTRTNF      NS ++ +IR+LL+ K+++ ++  +  KP +S        +S  +
Sbjct: 68  LRGSNTRTNFANHFPNNSQLSLKIRNLLHQKQSMKQQQQQQHKPVSSLTDCNINYISTAT 127

Query: 143 AVVDPSIKDDGL---FEGAYKPDMTNCLEEREVSSCDSCCSESCELG----VSLAENGTV 202
           ++   +             Y+PD ++ + + E        S     G    + LA+ G  
Sbjct: 128 SLTTTTTTTTTTAIPLNNVYRPD-SSVIGQPETEGLQLPYSWPLVSGFNHQIPLAQAGGE 187

Query: 203 SSEEL--ELCAFERM---KVERQISASLYAINGVQEYME------AVHEASEPIWDLPPL 242
           +   L       + +   ++ERQISASLYA+NG   Y +      A+ + ++PIWDLP L
Sbjct: 188 THGHLNDHYSTDQHLGLAEIERQISASLYAMNGANSYYDNMNAEYAIFDPTDPIWDLPSL 247

[Close]
BLAST of CSPI04G11180 vs. Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.1e-15
Identity = 46/100 (46.00%), Postives = 62/100 (62.00%), Query Frame = 1 

Query: 36  KFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQ 95
           KF GVRQRP G+W AEI+D  K++R+WLGT+ TAEEAA  YD AA  LRG +  TNF   
Sbjct: 121 KFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNFSVT 180

Query: 96  ISTNSPIASRIRSLLNTKKTVNRKPPEKPTTSAAVSAGSA 136
            +T +   +   S +  KK  N K  +  T S+++S  S+
Sbjct: 181 PTTATEKKAPPPSPVKKKKKKNNKSKKSVTASSSISRSSS 220

[Close]
BLAST of CSPI04G11180 vs. Swiss-Prot
Match: CRF1_ARATH (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 9.6e-15
Identity = 37/59 (62.71%), Postives = 45/59 (76.27%), Query Frame = 1 

Query: 36  KFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIP 95
           KF GVRQRP G+W AEI+D ++++R+WLGTF+TAEEAA  YD AA  LRG N   NF P
Sbjct: 86  KFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFPP 144

[Close]
BLAST of CSPI04G11180 vs. Swiss-Prot
Match: LEP_ARATH (Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana GN=LEP PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.6e-14
Identity = 60/175 (34.29%), Postives = 92/175 (52.57%), Query Frame = 1 

Query: 19  IKSTKFKARNRSNNN-GNKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYD 78
           + +T  K++ + ++  G +F+GVR+RP GR+ AEI+D T K R WLGTF+TAEEAA AYD
Sbjct: 1   MNTTSSKSKKKQDDQVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAALAYD 60

Query: 79  EAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKPPEKPTTSAAV------- 138
            AA  +RG+  RTNF   + ++ P +S + S+++        PP  P ++  V       
Sbjct: 61  RAARSMRGTRARTNF---VYSDMPPSSSVTSIVSPDDPPPPPPPPAPPSNDPVDYMMMFN 120

Query: 139 ---SAGSAVVDPSIK--DDGLFEGA-------YKPDMTNCLEEREVSSCDSCCSE 174
              S  S ++ P     D  +F G+       Y  D +N L        +SC S+
Sbjct: 121 QYSSTDSPMLQPHCDQVDSYMFGGSQSSNSYCYSNDSSNELPPLPSDLSNSCYSQ 172

[Close]
BLAST of CSPI04G11180 vs. Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.8e-14
Identity = 47/115 (40.87%), Postives = 66/115 (57.39%), Query Frame = 1 

Query: 26  ARNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLLRG 85
           A++      N+F G+RQRP G+W AEI+D  K +R+WLGTF +AEEAARAYD  A  +RG
Sbjct: 109 AKSAKRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAARAYDAEARRIRG 168

Query: 86  SNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKPPEKPTTSAAVSAGSAVVDPS 141
              + NF    +T     +   +    K +V +KP  KP  +   +A +A V PS
Sbjct: 169 KKAKVNFPEAPTTAQKRRAGSTTAKAPKSSVEQKPTVKPAFNNLANA-NAFVYPS 222

[Close]
BLAST of CSPI04G11180 vs. TrEMBL
Match: A0A0A0L1B8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G192030 PE=4 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 1.2e-115
Identity = 217/218 (99.54%), Postives = 217/218 (99.54%), Query Frame = 1 

Query: 1   MEIDFQSPEIHRGATASIIKSTKFKARNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR 60
           MEIDFQSPEIHRGATASIIKSTKFK RNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR
Sbjct: 1   MEIDFQSPEIHRGATASIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR 60

Query: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKP 120
           MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKP
Sbjct: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKP 120

Query: 121 PEKPTTSAAVSAGSAVVDPSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCELGVS 180
           PEKPTTSAAVSAGSAVVDPSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCELGVS
Sbjct: 121 PEKPTTSAAVSAGSAVVDPSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCELGVS 180

Query: 181 LAENGTVSSEELELCAFERMKVERQISASLYAINGVQE 219
           LAENGTVSSEELELCAFERMKVERQISASLYAINGVQE
Sbjct: 181 LAENGTVSSEELELCAFERMKVERQISASLYAINGVQE 218

[Close]
BLAST of CSPI04G11180 vs. TrEMBL
Match: D7TI77_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g07250 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 3.1e-68
Identity = 156/267 (58.43%), Postives = 186/267 (69.66%), Query Frame = 1 

Query: 1   MEIDFQSPEIHRGATASIIKSTKFKARNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR 60
           MEI FQ P+    AT    K  KFK RNRSN+N NKFVGVRQRPSGRWVAEIKDTT+KIR
Sbjct: 1   MEIQFQQPKGAIPAT----KVRKFKGRNRSNSN-NKFVGVRQRPSGRWVAEIKDTTQKIR 60

Query: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKP 120
           MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIP +S+NSP+ASRIR+LL+ KK    K 
Sbjct: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPNVSSNSPLASRIRTLLDNKK--GAKQ 120

Query: 121 PEK--------------PTTSAAVSAGS-AVVDPSIKDDGLFEGAYKPDMTNCLEEREVS 180
           P++              P  S+  S+GS ++    I++  LF+ AYKPD++NC EE E+ 
Sbjct: 121 PKQTSVDSSNISTTIVTPCASSCTSSGSNSLSSEKIQETQLFDDAYKPDLSNCSEEVELG 180

Query: 181 SCDSCCSESCELG----------VSLAENGTVS-SEELELCAFERMKVERQISASLYAIN 240
           S +S  S     G          + L +NG +  + E E   FERMKVERQISASLYA+N
Sbjct: 181 SSESGLSWGFAAGFDRFSFAQQVLDLPKNGGLQEAAEGEFSEFERMKVERQISASLYAMN 240

Query: 241 GVQEYMEAVHEASEPIWDLPPLCSLFC 242
           GVQEYM+ VH+ S+ +WDLPPLCSLFC
Sbjct: 241 GVQEYMDTVHDPSDALWDLPPLCSLFC 260

[Close]
BLAST of CSPI04G11180 vs. TrEMBL
Match: I1N899_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G113100 PE=4 SV=2)

HSP 1 Score: 262.3 bits (669), Expect = 5.8e-67
Identity = 151/276 (54.71%), Postives = 184/276 (66.67%), Query Frame = 1 

Query: 1   MEIDFQSPEI-HRGATASIIKSTKFKARNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKI 60
           MEI FQ P + H+ +  +I K  KFK R+R NNN NKFVGVRQRPSGRWVAEIKDTT+KI
Sbjct: 1   MEIQFQQPNLQHQKSGIAITKGGKFKGRSR-NNNTNKFVGVRQRPSGRWVAEIKDTTQKI 60

Query: 61  RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTV--- 120
           RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFI  +S +SP+ASRIR+LLN +K +   
Sbjct: 61  RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFITHVSLDSPLASRIRNLLNNRKGIKKE 120

Query: 121 --------NRKPPEKPTTSAAVSAGSAVVDPSIKDD-------------GLFEGAYKPDM 180
                   N   P   TTS+A S G++    +  D+              LF+ AYKPD+
Sbjct: 121 EDANANANNAPAPRVSTTSSATSTGTSSNSSNGNDNNDQSLSTVTTQSSNLFDDAYKPDL 180

Query: 181 TNCLEERE---VSSCDSCCSESCE-------LGVSLAENGTVSSEELELCAFERMKVERQ 240
           +NC EE E    S+   C     +         +   ++G  ++ +L+L  FERMKVERQ
Sbjct: 181 SNCREEFESGHQSNTSWCFGPVFDRFPMAQIFDIPKIDDGLTNAADLDLSEFERMKVERQ 240

Query: 241 ISASLYAINGVQEYMEAVHEASEPIWDLPPLCSLFC 242
           ISASLYAINGVQEYME V +++E +WDLPPLCSLFC
Sbjct: 241 ISASLYAINGVQEYMETVQDSNETLWDLPPLCSLFC 275

[Close]
BLAST of CSPI04G11180 vs. TrEMBL
Match: A0A0B2RSB3_GLYSO (Ethylene-responsive transcription factor RAP2-11 OS=Glycine soja GN=glysoja_011240 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 5.8e-67
Identity = 151/276 (54.71%), Postives = 184/276 (66.67%), Query Frame = 1 

Query: 1   MEIDFQSPEI-HRGATASIIKSTKFKARNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKI 60
           MEI FQ P + H+ +  +I K  KFK R+R NNN NKFVGVRQRPSGRWVAEIKDTT+KI
Sbjct: 1   MEIQFQQPNLQHQKSGIAITKGGKFKGRSR-NNNTNKFVGVRQRPSGRWVAEIKDTTQKI 60

Query: 61  RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTV--- 120
           RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFI  +S +SP+ASRIR+LLN +K +   
Sbjct: 61  RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFITHVSLDSPLASRIRNLLNNRKGIKKE 120

Query: 121 --------NRKPPEKPTTSAAVSAGSAVVDPSIKDD-------------GLFEGAYKPDM 180
                   N   P   TTS+A S G++    +  D+              LF+ AYKPD+
Sbjct: 121 EDANANANNAPAPRVSTTSSATSTGTSSNSSNGNDNNDQSLSTVTTQSSNLFDDAYKPDL 180

Query: 181 TNCLEERE---VSSCDSCCSESCE-------LGVSLAENGTVSSEELELCAFERMKVERQ 240
           +NC EE E    S+   C     +         +   ++G  ++ +L+L  FERMKVERQ
Sbjct: 181 SNCREEFESGHQSNTSWCFGPVFDRFPMAQIFDIPKIDDGLTNAADLDLSEFERMKVERQ 240

Query: 241 ISASLYAINGVQEYMEAVHEASEPIWDLPPLCSLFC 242
           ISASLYAINGVQEYME V +++E +WDLPPLCSLFC
Sbjct: 241 ISASLYAINGVQEYMETVQDSNETLWDLPPLCSLFC 275

[Close]
BLAST of CSPI04G11180 vs. TrEMBL
Match: A2Q5W1_MEDTR (ERF transcription factor OS=Medicago truncatula GN=ERN PE=2 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 2.4e-65
Identity = 150/271 (55.35%), Postives = 178/271 (65.68%), Query Frame = 1 

Query: 1   MEIDFQSPEIHRGATASII--KSTKFKARNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKK 60
           MEI FQ P +        +  K  KFK RNR++NN NKFVGVRQRPSGRWVAEIKDTT+K
Sbjct: 1   MEIQFQQPNMQNQKAGISVTNKGGKFKGRNRNSNNTNKFVGVRQRPSGRWVAEIKDTTQK 60

Query: 61  IRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKK---- 120
           IRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFI  +S +SP+ASRIR+LLN +K    
Sbjct: 61  IRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFITHVSLDSPLASRIRNLLNNRKGDKK 120

Query: 121 ----TVNRKPPEKPTTSAAVSA--------GSAVVDPSIKDDGLFEGAYKPDMTNCLEER 180
                V   P    TT +  S          S +   + ++  LFE AYKPD++NC   +
Sbjct: 121 QEDGAVASAPSNSKTTISNTSTITSNDDNKESTLSTCATRNTELFEDAYKPDLSNC---K 180

Query: 181 EVSSCDSCCSESCELG-----------VSLAENGTVS-SEELELCAFERMKVERQISASL 240
           EV    S  + SC  G           + +A+N  ++ +  LEL  FERMKVERQISASL
Sbjct: 181 EVFESGSQSNISCGFGPFFDHFSFTQLLDMAKNDDITDASSLELSEFERMKVERQISASL 240

Query: 241 YAINGVQEYMEAVHEASEPIWDLPPLCSLFC 242
           YAINGV EYME V E++E +WDLPPLCSLFC
Sbjct: 241 YAINGVHEYMETVQESNEALWDLPPLCSLFC 268

[Close]
BLAST of CSPI04G11180 vs. TAIR10
Match: AT5G19790.1 (AT5G19790.1 related to AP2 11)

HSP 1 Score: 159.8 bits (403), Expect = 2.0e-39
Identity = 104/245 (42.45%), Postives = 143/245 (58.37%), Query Frame = 1 

Query: 23  KFKARNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACL 82
           K K + +S  N  KFVGVRQRPSG+WVAEIKDTT+KIRMWLGTFETAEEAARAYDEAACL
Sbjct: 8   KQKTKEKSKGNKTKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACL 67

Query: 83  LRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKPPE--KPTTSAA------VSAGS 142
           LRGSNTRTNF      NS ++ +IR+LL+ K+++ ++  +  KP +S        +S  +
Sbjct: 68  LRGSNTRTNFANHFPNNSQLSLKIRNLLHQKQSMKQQQQQQHKPVSSLTDCNINYISTAT 127

Query: 143 AVVDPSIKDDGL---FEGAYKPDMTNCLEEREVSSCDSCCSESCELG----VSLAENGTV 202
           ++   +             Y+PD ++ + + E        S     G    + LA+ G  
Sbjct: 128 SLTTTTTTTTTTAIPLNNVYRPD-SSVIGQPETEGLQLPYSWPLVSGFNHQIPLAQAGGE 187

Query: 203 SSEEL--ELCAFERM---KVERQISASLYAINGVQEYME------AVHEASEPIWDLPPL 242
           +   L       + +   ++ERQISASLYA+NG   Y +      A+ + ++PIWDLP L
Sbjct: 188 THGHLNDHYSTDQHLGLAEIERQISASLYAMNGANSYYDNMNAEYAIFDPTDPIWDLPSL 247

[Close]
BLAST of CSPI04G11180 vs. TAIR10
Match: AT4G23750.1 (AT4G23750.1 cytokinin response factor 2)

HSP 1 Score: 85.1 bits (209), Expect = 6.4e-17
Identity = 46/100 (46.00%), Postives = 62/100 (62.00%), Query Frame = 1 

Query: 36  KFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQ 95
           KF GVRQRP G+W AEI+D  K++R+WLGT+ TAEEAA  YD AA  LRG +  TNF   
Sbjct: 121 KFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNFSVT 180

Query: 96  ISTNSPIASRIRSLLNTKKTVNRKPPEKPTTSAAVSAGSA 136
            +T +   +   S +  KK  N K  +  T S+++S  S+
Sbjct: 181 PTTATEKKAPPPSPVKKKKKKNNKSKKSVTASSSISRSSS 220

[Close]
BLAST of CSPI04G11180 vs. TAIR10
Match: AT4G11140.1 (AT4G11140.1 cytokinin response factor 1)

HSP 1 Score: 82.0 bits (201), Expect = 5.4e-16
Identity = 37/59 (62.71%), Postives = 45/59 (76.27%), Query Frame = 1 

Query: 36  KFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIP 95
           KF GVRQRP G+W AEI+D ++++R+WLGTF+TAEEAA  YD AA  LRG N   NF P
Sbjct: 86  KFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFPP 144

[Close]
BLAST of CSPI04G11180 vs. TAIR10
Match: AT5G13910.1 (AT5G13910.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 81.3 bits (199), Expect = 9.3e-16
Identity = 60/175 (34.29%), Postives = 92/175 (52.57%), Query Frame = 1 

Query: 19  IKSTKFKARNRSNNN-GNKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYD 78
           + +T  K++ + ++  G +F+GVR+RP GR+ AEI+D T K R WLGTF+TAEEAA AYD
Sbjct: 1   MNTTSSKSKKKQDDQVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAALAYD 60

Query: 79  EAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKPPEKPTTSAAV------- 138
            AA  +RG+  RTNF   + ++ P +S + S+++        PP  P ++  V       
Sbjct: 61  RAARSMRGTRARTNF---VYSDMPPSSSVTSIVSPDDPPPPPPPPAPPSNDPVDYMMMFN 120

Query: 139 ---SAGSAVVDPSIK--DDGLFEGA-------YKPDMTNCLEEREVSSCDSCCSE 174
              S  S ++ P     D  +F G+       Y  D +N L        +SC S+
Sbjct: 121 QYSSTDSPMLQPHCDQVDSYMFGGSQSSNSYCYSNDSSNELPPLPSDLSNSCYSQ 172

[Close]
BLAST of CSPI04G11180 vs. TAIR10
Match: AT1G80580.1 (AT1G80580.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 80.1 bits (196), Expect = 2.1e-15
Identity = 37/57 (64.91%), Postives = 45/57 (78.95%), Query Frame = 1 

Query: 37  FVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFI 94
           F+GVR+RP GRW AEI+D   + R WLGTF+TAEEAARAYD AA  LRG+  +TNF+
Sbjct: 116 FMGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGTKAKTNFV 172

[Close]
BLAST of CSPI04G11180 vs. NCBI nr
Match: gi|449462796|ref|XP_004149126.1| (PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Cucumis sativus])

HSP 1 Score: 476.5 bits (1225), Expect = 2.8e-131
Identity = 240/241 (99.59%), Postives = 240/241 (99.59%), Query Frame = 1 

Query: 1   MEIDFQSPEIHRGATASIIKSTKFKARNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR 60
           MEIDFQSPEIHRGATASIIKSTKFK RNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR
Sbjct: 1   MEIDFQSPEIHRGATASIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR 60

Query: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKP 120
           MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKP
Sbjct: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKP 120

Query: 121 PEKPTTSAAVSAGSAVVDPSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCELGVS 180
           PEKPTTSAAVSAGSAVVDPSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCELGVS
Sbjct: 121 PEKPTTSAAVSAGSAVVDPSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCELGVS 180

Query: 181 LAENGTVSSEELELCAFERMKVERQISASLYAINGVQEYMEAVHEASEPIWDLPPLCSLF 240
           LAENGTVSSEELELCAFERMKVERQISASLYAINGVQEYMEAVHEASEPIWDLPPLCSLF
Sbjct: 181 LAENGTVSSEELELCAFERMKVERQISASLYAINGVQEYMEAVHEASEPIWDLPPLCSLF 240

Query: 241 C 242
           C
Sbjct: 241 C 241

[Close]
BLAST of CSPI04G11180 vs. NCBI nr
Match: gi|659082707|ref|XP_008441991.1| (PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Cucumis melo])

HSP 1 Score: 453.0 bits (1164), Expect = 3.3e-124
Identity = 232/242 (95.87%), Postives = 233/242 (96.28%), Query Frame = 1 

Query: 1   MEIDFQSPEIHRGATA-SIIKSTKFKARNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKI 60
           MEIDFQS EIH GATA SIIKSTKFK RNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKI
Sbjct: 1   MEIDFQSSEIHGGATASSIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKI 60

Query: 61  RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRK 120
           RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRK
Sbjct: 61  RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRK 120

Query: 121 PPEKPTTSAAVSAGSAVVDPSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCELGV 180
           P E PTTS A SAGSAVV PSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCELGV
Sbjct: 121 PLETPTTSVAASAGSAVVGPSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCELGV 180

Query: 181 SLAENGTVSSEELELCAFERMKVERQISASLYAINGVQEYMEAVHEASEPIWDLPPLCSL 240
           SLAENGTVSSEELELCAFERMKVERQISASLYAINGVQEYMEAVHEA+EPIWDLPPLCSL
Sbjct: 181 SLAENGTVSSEELELCAFERMKVERQISASLYAINGVQEYMEAVHEANEPIWDLPPLCSL 240

Query: 241 FC 242
           FC
Sbjct: 241 FC 242

[Close]
BLAST of CSPI04G11180 vs. NCBI nr
Match: gi|700198773|gb|KGN53931.1| (hypothetical protein Csa_4G192030 [Cucumis sativus])

HSP 1 Score: 424.1 bits (1089), Expect = 1.7e-115
Identity = 217/218 (99.54%), Postives = 217/218 (99.54%), Query Frame = 1 

Query: 1   MEIDFQSPEIHRGATASIIKSTKFKARNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR 60
           MEIDFQSPEIHRGATASIIKSTKFK RNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR
Sbjct: 1   MEIDFQSPEIHRGATASIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR 60

Query: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKP 120
           MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKP
Sbjct: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKP 120

Query: 121 PEKPTTSAAVSAGSAVVDPSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCELGVS 180
           PEKPTTSAAVSAGSAVVDPSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCELGVS
Sbjct: 121 PEKPTTSAAVSAGSAVVDPSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCELGVS 180

Query: 181 LAENGTVSSEELELCAFERMKVERQISASLYAINGVQE 219
           LAENGTVSSEELELCAFERMKVERQISASLYAINGVQE
Sbjct: 181 LAENGTVSSEELELCAFERMKVERQISASLYAINGVQE 218

[Close]
BLAST of CSPI04G11180 vs. NCBI nr
Match: gi|225441591|ref|XP_002281619.1| (PREDICTED: ethylene-responsive transcription factor RAP2-11 [Vitis vinifera])

HSP 1 Score: 266.5 bits (680), Expect = 4.4e-68
Identity = 156/267 (58.43%), Postives = 186/267 (69.66%), Query Frame = 1 

Query: 1   MEIDFQSPEIHRGATASIIKSTKFKARNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR 60
           MEI FQ P+    AT    K  KFK RNRSN+N NKFVGVRQRPSGRWVAEIKDTT+KIR
Sbjct: 1   MEIQFQQPKGAIPAT----KVRKFKGRNRSNSN-NKFVGVRQRPSGRWVAEIKDTTQKIR 60

Query: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKP 120
           MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIP +S+NSP+ASRIR+LL+ KK    K 
Sbjct: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPNVSSNSPLASRIRTLLDNKK--GAKQ 120

Query: 121 PEK--------------PTTSAAVSAGS-AVVDPSIKDDGLFEGAYKPDMTNCLEEREVS 180
           P++              P  S+  S+GS ++    I++  LF+ AYKPD++NC EE E+ 
Sbjct: 121 PKQTSVDSSNISTTIVTPCASSCTSSGSNSLSSEKIQETQLFDDAYKPDLSNCSEEVELG 180

Query: 181 SCDSCCSESCELG----------VSLAENGTVS-SEELELCAFERMKVERQISASLYAIN 240
           S +S  S     G          + L +NG +  + E E   FERMKVERQISASLYA+N
Sbjct: 181 SSESGLSWGFAAGFDRFSFAQQVLDLPKNGGLQEAAEGEFSEFERMKVERQISASLYAMN 240

Query: 241 GVQEYMEAVHEASEPIWDLPPLCSLFC 242
           GVQEYM+ VH+ S+ +WDLPPLCSLFC
Sbjct: 241 GVQEYMDTVHDPSDALWDLPPLCSLFC 260

[Close]
BLAST of CSPI04G11180 vs. NCBI nr
Match: gi|571556256|ref|XP_006604239.1| (PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Glycine max])

HSP 1 Score: 262.3 bits (669), Expect = 8.3e-67
Identity = 151/276 (54.71%), Postives = 184/276 (66.67%), Query Frame = 1 

Query: 1   MEIDFQSPEI-HRGATASIIKSTKFKARNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKI 60
           MEI FQ P + H+ +  +I K  KFK R+R NNN NKFVGVRQRPSGRWVAEIKDTT+KI
Sbjct: 1   MEIQFQQPNLQHQKSGIAITKGGKFKGRSR-NNNTNKFVGVRQRPSGRWVAEIKDTTQKI 60

Query: 61  RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTV--- 120
           RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFI  +S +SP+ASRIR+LLN +K +   
Sbjct: 61  RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFITHVSLDSPLASRIRNLLNNRKGIKKE 120

Query: 121 --------NRKPPEKPTTSAAVSAGSAVVDPSIKDD-------------GLFEGAYKPDM 180
                   N   P   TTS+A S G++    +  D+              LF+ AYKPD+
Sbjct: 121 EDANANANNAPAPRVSTTSSATSTGTSSNSSNGNDNNDQSLSTVTTQSSNLFDDAYKPDL 180

Query: 181 TNCLEERE---VSSCDSCCSESCE-------LGVSLAENGTVSSEELELCAFERMKVERQ 240
           +NC EE E    S+   C     +         +   ++G  ++ +L+L  FERMKVERQ
Sbjct: 181 SNCREEFESGHQSNTSWCFGPVFDRFPMAQIFDIPKIDDGLTNAADLDLSEFERMKVERQ 240

Query: 241 ISASLYAINGVQEYMEAVHEASEPIWDLPPLCSLFC 242
           ISASLYAINGVQEYME V +++E +WDLPPLCSLFC
Sbjct: 241 ISASLYAINGVQEYMETVQDSNETLWDLPPLCSLFC 275

The following BLAST results are available for this feature:
BLAST of CSPI04G11180 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RA211_ARATH3.6e-3842.45Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana GN=RAP2... [more]
CRF2_ARATH1.1e-1546.00Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE... [more]
CRF1_ARATH9.6e-1562.71Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE... [more]
LEP_ARATH1.6e-1434.29Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana GN=LEP PE=2... [more]
ERF1_ORYSJ2.8e-1440.87Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=ER... [more]
BLAST of CSPI04G11180 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1B8_CUCSA1.2e-11599.54Uncharacterized protein OS=Cucumis sativus GN=Csa_4G192030 PE=4 SV=1[more]
D7TI77_VITVI3.1e-6858.43Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g07250 PE=4 SV=... [more]
I1N899_SOYBN5.8e-6754.71Uncharacterized protein OS=Glycine max GN=GLYMA_19G113100 PE=4 SV=2[more]
A0A0B2RSB3_GLYSO5.8e-6754.71Ethylene-responsive transcription factor RAP2-11 OS=Glycine soja GN=glysoja_0112... [more]
A2Q5W1_MEDTR2.4e-6555.35ERF transcription factor OS=Medicago truncatula GN=ERN PE=2 SV=1[more]
BLAST of CSPI04G11180 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G19790.12.0e-3942.45 related to AP2 11[more]
AT4G23750.16.4e-1746.00 cytokinin response factor 2[more]
AT4G11140.15.4e-1662.71 cytokinin response factor 1[more]
AT5G13910.19.3e-1634.29 Integrase-type DNA-binding superfamily protein[more]
AT1G80580.12.1e-1564.91 Integrase-type DNA-binding superfamily protein[more]
BLAST of CSPI04G11180 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449462796|ref|XP_004149126.1|2.8e-13199.59PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Cucumis sativu... [more]
gi|659082707|ref|XP_008441991.1|3.3e-12495.87PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Cucumis melo][more]
gi|700198773|gb|KGN53931.1|1.7e-11599.54hypothetical protein Csa_4G192030 [Cucumis sativus][more]
gi|225441591|ref|XP_002281619.1|4.4e-6858.43PREDICTED: ethylene-responsive transcription factor RAP2-11 [Vitis vinifera][more]
gi|571556256|ref|XP_006604239.1|8.3e-6754.71PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
IPR017392AP2/ERF-transcript_factor
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G11180.1CSPI04G11180.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 37..48
score: 7.6E-8coord: 59..75
score: 7.
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 36..92
score: 3.7
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 36..85
score: 2.7
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 36..99
score: 1.3
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 36..93
score: 19
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 36..93
score: 1.83
IPR017392AP2/ERF transcription factor ERF/PTI6PANTHERPTHR31194SHN SHINE , DNA BINDING / TRANSCRIPTION FACTORcoord: 35..238
score: 1.8
NoneNo IPR availablePANTHERPTHR31194:SF5SUBFAMILY NOT NAMEDcoord: 35..238
score: 1.8