Carg12601 (gene) Silver-seed gourd

Overview
NameCarg12601
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionEthylene-responsive transcription factor
LocationCucurbita_argyrosperma_scaffold_021 : 38877 .. 39659 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATCCACTTTCAGTCGCCGGGAACCCACGGCGGAGCCACCGCTTCATTGGGCAAATCAAGCAAATTCAAAGGCAGAACTAGAGGGAACAATGCTAACAAGTTCGTGGGAGTCCGGCAGCGGCCGTCGGGGAGATGGGTGGCGGAAATCAAAGACACGACAAAGAAAATCCGAATGTGGCTCGGAACTTTCGAGACGGCGGAGGAAGCCGCTCGAGCTTACGATGAAGCCGCTTGTCTTCTTCGAGGTTCCAATACAAGAACGAATTTCATCCCACAAATCTCCACTAATTCCCCAATCGCCTCACGAATTCGCAGCCTCTTAAACAGCAGAAAAAACCAAATTCTAAATCCACTCAAAAACCACCCCGCCGCCGCCGTCGCCGCTCCAATAATTCAGGACGGCCGGCTGTTCGACGGCGCCTATAAACCCGACATGACGAACTGTTTGGAAGAAACAGAGATGGGTTCTGATTTTTGTAGCGATTCATCTTGTTCTTCTGATTCTTCTCGATTGGGAGCTTCTTCTGGAGGTGGGTTTGTTGATGGGCTTTCGATGGTGCAAGAATCGATGAAGTTTCCGGTGAACGCGGCGGCGCTTCAAGCGGAAAGCGAGCATTCAGAGGATTTGGAATTGTTAGCTTTTGAGAGGATGAAAGTTGAGAGGCAAATTTCTGCTTCTTTATATGCCATGAATGGAGTTCAGGAGTATATGGAGGCTGTTCATGAGGCCTCTGAGGCAATTTGGGATCTTCCACCACTCTGTTCTTTGTTCTGTTGA

mRNA sequence

ATGGAAATCCACTTTCAGTCGCCGGGAACCCACGGCGGAGCCACCGCTTCATTGGGCAAATCAAGCAAATTCAAAGGCAGAACTAGAGGGAACAATGCTAACAAGTTCGTGGGAGTCCGGCAGCGGCCGTCGGGGAGATGGGTGGCGGAAATCAAAGACACGACAAAGAAAATCCGAATGTGGCTCGGAACTTTCGAGACGGCGGAGGAAGCCGCTCGAGCTTACGATGAAGCCGCTTGTCTTCTTCGAGGTTCCAATACAAGAACGAATTTCATCCCACAAATCTCCACTAATTCCCCAATCGCCTCACGAATTCGCAGCCTCTTAAACAGCAGAAAAAACCAAATTCTAAATCCACTCAAAAACCACCCCGCCGCCGCCGTCGCCGCTCCAATAATTCAGGACGGCCGGCTGTTCGACGGCGCCTATAAACCCGACATGACGAACTGTTTGGAAGAAACAGAGATGGGTTCTGATTTTTGTAGCGATTCATCTTGTTCTTCTGATTCTTCTCGATTGGGAGCTTCTTCTGGAGGTGGGTTTGTTGATGGGCTTTCGATGGTGCAAGAATCGATGAAGTTTCCGGTGAACGCGGCGGCGCTTCAAGCGGAAAGCGAGCATTCAGAGGATTTGGAATTGTTAGCTTTTGAGAGGATGAAAGTTGAGAGGCAAATTTCTGCTTCTTTATATGCCATGAATGGAGTTCAGGAGTATATGGAGGCTGTTCATGAGGCCTCTGAGGCAATTTGGGATCTTCCACCACTCTGTTCTTTGTTCTGTTGA

Coding sequence (CDS)

ATGGAAATCCACTTTCAGTCGCCGGGAACCCACGGCGGAGCCACCGCTTCATTGGGCAAATCAAGCAAATTCAAAGGCAGAACTAGAGGGAACAATGCTAACAAGTTCGTGGGAGTCCGGCAGCGGCCGTCGGGGAGATGGGTGGCGGAAATCAAAGACACGACAAAGAAAATCCGAATGTGGCTCGGAACTTTCGAGACGGCGGAGGAAGCCGCTCGAGCTTACGATGAAGCCGCTTGTCTTCTTCGAGGTTCCAATACAAGAACGAATTTCATCCCACAAATCTCCACTAATTCCCCAATCGCCTCACGAATTCGCAGCCTCTTAAACAGCAGAAAAAACCAAATTCTAAATCCACTCAAAAACCACCCCGCCGCCGCCGTCGCCGCTCCAATAATTCAGGACGGCCGGCTGTTCGACGGCGCCTATAAACCCGACATGACGAACTGTTTGGAAGAAACAGAGATGGGTTCTGATTTTTGTAGCGATTCATCTTGTTCTTCTGATTCTTCTCGATTGGGAGCTTCTTCTGGAGGTGGGTTTGTTGATGGGCTTTCGATGGTGCAAGAATCGATGAAGTTTCCGGTGAACGCGGCGGCGCTTCAAGCGGAAAGCGAGCATTCAGAGGATTTGGAATTGTTAGCTTTTGAGAGGATGAAAGTTGAGAGGCAAATTTCTGCTTCTTTATATGCCATGAATGGAGTTCAGGAGTATATGGAGGCTGTTCATGAGGCCTCTGAGGCAATTTGGGATCTTCCACCACTCTGTTCTTTGTTCTGTTGA

Protein sequence

MEIHFQSPGTHGGATASLGKSSKFKGRTRGNNANKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNSRKNQILNPLKNHPAAAVAAPIIQDGRLFDGAYKPDMTNCLEETEMGSDFCSDSSCSSDSSRLGASSGGGFVDGLSMVQESMKFPVNAAALQAESEHSEDLELLAFERMKVERQISASLYAMNGVQEYMEAVHEASEAIWDLPPLCSLFC
Homology
[Close]
BLAST of Carg12601 vs. NCBI nr
Match: XP_022925003.1 (ethylene-responsive transcription factor RAP2-11-like [Cucurbita moschata])

HSP 1 Score: 511.9 bits (1317), Expect = 1.3e-141
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0 

Query: 1   MEIHFQSPGTHGGATASLGKSSKFKGRTRGNNANKFVGVRQRPSGRWVAEIKDTTKKIRM 60
           MEIHFQSPGTHGGATASLGKSSKFKGRTRGNNANKFVGVRQRPSGRWVAEIKDTTKKIRM
Sbjct: 1   MEIHFQSPGTHGGATASLGKSSKFKGRTRGNNANKFVGVRQRPSGRWVAEIKDTTKKIRM 60

Query: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNSRKNQILNPL 120
           WLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNSRKNQILNPL
Sbjct: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNSRKNQILNPL 120

Query: 121 KNHPAAAVAAPIIQDGRLFDGAYKPDMTNCLEETEMGSDFCSDSSCSSDSSRLGASSGGG 180
           KNHPAAAVAAPIIQDGRLFDGAYKPDMTNCLEETEMGSDFCSDSSCSSDSSRLGASSGGG
Sbjct: 121 KNHPAAAVAAPIIQDGRLFDGAYKPDMTNCLEETEMGSDFCSDSSCSSDSSRLGASSGGG 180

Query: 181 FVDGLSMVQESMKFPVNAAALQAESEHSEDLELLAFERMKVERQISASLYAMNGVQEYME 240
           FVDGLSMVQESMKFPVNAAALQAESEHSEDLELLAFERMKVERQISASLYAMNGVQEYME
Sbjct: 181 FVDGLSMVQESMKFPVNAAALQAESEHSEDLELLAFERMKVERQISASLYAMNGVQEYME 240

Query: 241 AVHEASEAIWDLPPLCSLFC 261
           AVHEASEAIWDLPPLCSLFC
Sbjct: 241 AVHEASEAIWDLPPLCSLFC 260

[Close]
BLAST of Carg12601 vs. NCBI nr
Match: XP_023521910.1 (ethylene-responsive transcription factor RAP2-11-like [Cucurbita pepo subsp. pepo] >XP_023518070.1 ethylene-responsive transcription factor RAP2-11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 496.1 bits (1276), Expect = 7.1e-137
Identity = 253/260 (97.31%), Postives = 253/260 (97.31%), Query Frame = 0 

Query: 1   MEIHFQSPGTHGGATASLGKSSKFKGRTRGNNANKFVGVRQRPSGRWVAEIKDTTKKIRM 60
           MEIHFQSPGTHGGATASLGKSSKFKGRTRGNNANKFVGVRQRPSGRWVAEIKDTTKKIRM
Sbjct: 1   MEIHFQSPGTHGGATASLGKSSKFKGRTRGNNANKFVGVRQRPSGRWVAEIKDTTKKIRM 60

Query: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNSRKNQILNPL 120
           WLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNSRKN ILNPL
Sbjct: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNSRKNPILNPL 120

Query: 121 KNHPAAAVAAPIIQDGRLFDGAYKPDMTNCLEETEMGSDFCSDSSCSSDSSRLGASSGGG 180
           KNH AAA AAPIIQDGRLFDGAYKPDMTNCLEETEMGSDFCSDSSCSSDSSRLGASSG G
Sbjct: 121 KNHSAAAAAAPIIQDGRLFDGAYKPDMTNCLEETEMGSDFCSDSSCSSDSSRLGASSGVG 180

Query: 181 FVDGLSMVQESMKFPVNAAALQAESEHSEDLELLAFERMKVERQISASLYAMNGVQEYME 240
           FVDGLSMVQESMKFPVNAAA QAE EHSEDLEL AFERMKVERQISASLYAMNGVQEYME
Sbjct: 181 FVDGLSMVQESMKFPVNAAAFQAEGEHSEDLELSAFERMKVERQISASLYAMNGVQEYME 240

Query: 241 AVHEASEAIWDLPPLCSLFC 261
           AVHEASEAIWDLPPLCSLFC
Sbjct: 241 AVHEASEAIWDLPPLCSLFC 260

[Close]
BLAST of Carg12601 vs. NCBI nr
Match: XP_022966432.1 (ethylene-responsive transcription factor RAP2-11-like [Cucurbita maxima])

HSP 1 Score: 467.6 bits (1202), Expect = 2.7e-128
Identity = 242/266 (90.98%), Postives = 246/266 (92.48%), Query Frame = 0 

Query: 1   MEIHFQSPGTHGGATASLGKSSKFKGRTRGNNANKFVGVRQRPSGRWVAEIKDTTKKIRM 60
           MEIHFQSPG HGGATASLGKSSKFKGRTRG+NANKF+GVRQRPSGRWVAEIKDTTKKIRM
Sbjct: 1   MEIHFQSPGIHGGATASLGKSSKFKGRTRGSNANKFLGVRQRPSGRWVAEIKDTTKKIRM 60

Query: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNSRKNQILNPL 120
           WLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLN RKN IL+PL
Sbjct: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNGRKNPILSPL 120

Query: 121 KN------HPAAAVAAPIIQDGRLFDGAYKPDMTNCLEETEMGSDFCSDSSCSSDSSRLG 180
           +N                IQDGRLFDGAYKPDMTNCLEETEMGSDFCSDSSCSSDSSRLG
Sbjct: 121 RNXXXXXXXXXXXXXXXXIQDGRLFDGAYKPDMTNCLEETEMGSDFCSDSSCSSDSSRLG 180

Query: 181 ASSGGGFVDGLSMVQESMKFPVNAAALQAESEHSEDLELLAFERMKVERQISASLYAMNG 240
           ASSG GFVDGLSMVQESMKFPVNAAALQAESEHSEDLELLAFERMKVERQISASLYAMNG
Sbjct: 181 ASSGAGFVDGLSMVQESMKFPVNAAALQAESEHSEDLELLAFERMKVERQISASLYAMNG 240

Query: 241 VQEYMEAVHEASEAIWDLPPLCSLFC 261
           VQEYMEAVHEASEAIWDLPPLCSLFC
Sbjct: 241 VQEYMEAVHEASEAIWDLPPLCSLFC 266

[Close]
BLAST of Carg12601 vs. NCBI nr
Match: XP_023545037.1 (ethylene-responsive transcription factor RAP2-11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 331.3 bits (848), Expect = 3.0e-87
Identity = 186/264 (70.45%), Postives = 199/264 (75.38%), Query Frame = 0 

Query: 1   MEIHFQSPGTHGGATASLGKSSKFKGRTRGNNANKFVGVRQRPSGRWVAEIKDTTKKIRM 60
           MEI+FQSP THGGA   + K+SKFKG+TRGNN NKFVGVRQRPSGRWVAEIKDTT+KIRM
Sbjct: 1   MEINFQSPETHGGAAVPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTRKIRM 60

Query: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTN-FIPQISTNSPIASRIRSLLNSRKNQILNP 120
           WLGTFETAEEAARAYDEAACLLRGSNTRTN FIPQISTNSPIASRIR+LLNS+K     P
Sbjct: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFFIPQISTNSPIASRIRTLLNSKK-----P 120

Query: 121 LKNHPA----AAVAAPIIQDGRLFDGAYKPDMTNCLEETEMGSDFCSDSSCSSDSSRLGA 180
           L+N PA    AAV AP IQDGR+FDG YKPDMTNC E+TEMG      S CSSDS R   
Sbjct: 121 LENPPAAAASAAVPAPTIQDGRMFDGDYKPDMTNCSEKTEMG------SCCSSDSCR--- 180

Query: 181 SSGGGFVDGLSMVQESMKFPVNAAALQAESEHSEDLELLAFERMKVERQISASLYAMNGV 240
                FVDG                      +SEDLEL  FERMK ERQIS  LYAMNGV
Sbjct: 181 -----FVDGF--------------------WNSEDLELCDFERMKFERQISGCLYAMNGV 225

Query: 241 QEYMEAVHEASEAIWDLPPLCSLF 260
            EYMEAVHEASE+IWD+PPLCSLF
Sbjct: 241 HEYMEAVHEASESIWDIPPLCSLF 225

[Close]
BLAST of Carg12601 vs. NCBI nr
Match: XP_022978278.1 (ethylene-responsive transcription factor RAP2-11-like [Cucurbita maxima])

HSP 1 Score: 328.2 bits (840), Expect = 2.6e-86
Identity = 185/261 (70.88%), Postives = 197/261 (75.48%), Query Frame = 0 

Query: 1   MEIHFQSPGTHGGATASLGKSSKFKGRTRGNNANKFVGVRQRPSGRWVAEIKDTTKKIRM 60
           MEIHFQSP THGGA   + K+SKFKG+TRGNN NKFVGVRQRPSGRWVAEIKDTTKKIRM
Sbjct: 1   MEIHFQSPETHGGAAVPVVKTSKFKGKTRGNNGNKFVGVRQRPSGRWVAEIKDTTKKIRM 60

Query: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTN-FIPQISTNSPIASRIRSLLNSRKNQILNP 120
           WLGTFETAEEAARAYDEAACLLRGSNTRTN FIPQISTNSPIASRIR+LLNS+K+ + NP
Sbjct: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFFIPQISTNSPIASRIRTLLNSKKS-LENP 120

Query: 121 LKNHPAAAVAAPIIQDGRLFDGAYKPDMTNCLEETEMGSDFCSDSSCSSDSSRLGASSGG 180
                AAAV AP IQDGR+ DG YKPDMTNC E+TEMG      S CSSDS R       
Sbjct: 121 AA-ASAAAVPAPTIQDGRMLDGDYKPDMTNCSEKTEMG------SCCSSDSCR------- 180

Query: 181 GFVDGLSMVQESMKFPVNAAALQAESEHSEDLELLAFERMKVERQISASLYAMNGVQEYM 240
            FVDG                      +S+DLE   FERMKVERQIS  LYAMNGV EYM
Sbjct: 181 -FVDGF--------------------WNSDDLEFCDFERMKVERQISGCLYAMNGVHEYM 225

Query: 241 EAVHEASEAIWDLPPLCSLFC 261
           EAVHEASE+IWDLPPL SLFC
Sbjct: 241 EAVHEASESIWDLPPLGSLFC 225

[Close]
BLAST of Carg12601 vs. TAIR10
Match: AT5G19790.1 (related to AP2 11)

HSP 1 Score: 142.9 bits (359), Expect = 2.8e-34
Identity = 104/263 (39.54%), Postives = 131/263 (49.81%), Query Frame = 0 

Query: 23  KFKGRTRGNNANKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLL 82
           K K +++GN   KFVGVRQRPSG+WVAEIKDTT+KIRMWLGTFETAEEAARAYDEAACLL
Sbjct: 10  KTKEKSKGNK-TKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLL 69

Query: 83  RGSNTRTNFIPQISTNSPIASRIRSLLNSRKNQILNPLKNHPAAAVAAPIIQDGRL---- 142
           RGSNTRTNF      NS ++ +IR+LL+ ++                             
Sbjct: 70  RGSNTRTNFANHFPNNSQLSLKIRNLLHQKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 129

Query: 143 --------------FDGAYKPDMTNCLE-ETEMGSDFCSDSSCSSDSSRLGASSGGGFVD 202
                          +  Y+PD +   + ETE      S    S  + ++  +  GG   
Sbjct: 130 XXXXXXXXXXXXXPLNNVYRPDSSVIGQPETEGLQLPYSWPLVSGFNHQIPLAQAGGETH 189

Query: 203 GLSMVQESMKFPVNAAALQAESEHSEDLELLAFERMKVERQISASLYAMNGVQEYME--- 261
           G                      +S D  L   E   +ERQISASLYAMNG   Y +   
Sbjct: 190 G-----------------HLNDHYSTDQHLGLAE---IERQISASLYAMNGANSYYDNMN 249

[Close]
BLAST of Carg12601 vs. TAIR10
Match: AT1G50640.1 (ethylene responsive element binding factor 3)

HSP 1 Score: 85.5 bits (210), Expect = 5.3e-17
Identity = 45/89 (50.56%), Postives = 59/89 (66.29%), Query Frame = 0 

Query: 35  KFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQ 94
           +F GVR+RP GR+ AEI+D  KK R+WLGTF++AEEAARAYD AA  LRG   +TNF   
Sbjct: 27  RFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKTNFPID 86

Query: 95  ISTNSPIASRIRSLLNSRKNQILNPLKNH 124
            S+  P   R   + N  +NQ+ +P  +H
Sbjct: 87  SSSPPPPNLRFNQIRNQNQNQV-DPFMDH 114

[Close]
BLAST of Carg12601 vs. TAIR10
Match: AT4G11140.1 (cytokinin response factor 1)

HSP 1 Score: 82.0 bits (201), Expect = 5.8e-16
Identity = 37/59 (62.71%), Postives = 45/59 (76.27%), Query Frame = 0 

Query: 35  KFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIP 94
           KF GVRQRP G+W AEI+D ++++R+WLGTF+TAEEAA  YD AA  LRG N   NF P
Sbjct: 86  KFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFPP 144

[Close]
BLAST of Carg12601 vs. TAIR10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 81.6 bits (200), Expect = 7.6e-16
Identity = 45/89 (50.56%), Postives = 60/89 (67.42%), Query Frame = 0 

Query: 32  NANKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNF 91
           ++ KF GVRQR  G WV+EI+    K R+WLGTF+TAE AARAYD+AA L+ G + +TNF
Sbjct: 3   HSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNF 62

Query: 92  IPQISTNSPIASRIRSLLNSRK--NQILN 119
            P I +N   +  I S L S K  +++LN
Sbjct: 63  -PVIKSNGSNSLEINSALRSPKSLSELLN 90

[Close]
BLAST of Carg12601 vs. TAIR10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 81.3 bits (199), Expect = 1.0e-15
Identity = 40/57 (70.18%), Postives = 44/57 (77.19%), Query Frame = 0 

Query: 35 KFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNF 92
          KF GVRQR  G WVAEI+    K R+WLGTFETAEEAARAYDEAA L+ G N +TNF
Sbjct: 6  KFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNF 62

[Close]
BLAST of Carg12601 vs. Swiss-Prot
Match: sp|A2Q5W1|ERN1_MEDTR (Ethylene-responsive transcription factor ERN1 OS=Medicago truncatula OX=3880 GN=ERN1 PE=2 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 5.0e-65
Identity = 153/290 (52.76%), Postives = 174/290 (60.00%), Query Frame = 0 

Query: 1   MEIHFQSPGTHG--GATASLGKSSKFKGRTR-GNNANKFVGVRQRPSGRWVAEIKDTTKK 60
           MEI FQ P         +   K  KFKGR R  NN NKFVGVRQRPSGRWVAEIKDTT+K
Sbjct: 1   MEIQFQQPNMQNQKAGISVTNKGGKFKGRNRNSNNTNKFVGVRQRPSGRWVAEIKDTTQK 60

Query: 61  IRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNSRKNQIL 120
           IRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFI  +S +SP+ASRIR+LLN+RK    
Sbjct: 61  IRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFITHVSLDSPLASRIRNLLNNRKGD-- 120

Query: 121 NPLKNHPAAAVAAP---------------------------IIQDGRLFDGAYKPDMTNC 180
              K    A  +AP                             ++  LF+ AYKPD++NC
Sbjct: 121 --KKQEDGAVASAPSNSKTTISNTSTITSNDDNKESTLSTCATRNTELFEDAYKPDLSNC 180

Query: 181 LEETEMGSDFCSDSSCSSDSSRLGASSGGGFVDGLSMVQESMKFPVNAAALQAESEHSED 240
            E  E GS   S+ SC            G F D  S  Q      +   A   +   +  
Sbjct: 181 KEVFESGSQ--SNISCGF----------GPFFDHFSFTQ------LLDMAKNDDITDASS 240

Query: 241 LELLAFERMKVERQISASLYAMNGVQEYMEAVHEASEAIWDLPPLCSLFC 261
           LEL  FERMKVERQISASLYA+NGV EYME V E++EA+WDLPPLCSLFC
Sbjct: 241 LELSEFERMKVERQISASLYAINGVHEYMETVQESNEALWDLPPLCSLFC 268

[Close]
BLAST of Carg12601 vs. Swiss-Prot
Match: sp|A0A1X9PY88|ERN1_LOTJA (Ethylene-responsive transcription factor ERN1 OS=Lotus japonicus OX=34305 GN=ERN1 PE=2 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.6e-63
Identity = 146/287 (50.87%), Postives = 174/287 (60.63%), Query Frame = 0 

Query: 1   MEIHFQSPGTHGGATASLGKSSKFKGRTRGNNANKFVGVRQRPSGRWVAEIKDTTKKIRM 60
           MEI FQ P       A   K  KFKGR R +N NKFVGVRQRPSGRWVAEIKDTT+KIRM
Sbjct: 1   MEIQFQQPNLQQHQKAGT-KGGKFKGRNRNSNTNKFVGVRQRPSGRWVAEIKDTTQKIRM 60

Query: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNSRKNQ----- 120
           WLGTFETAEEAARAYDEAACLLRGSNTRTNFI  +S +SP+ASRIR+LLN++K       
Sbjct: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFITHVSLDSPLASRIRNLLNNKKGNKKQEG 120

Query: 121 ----------------------ILNPLKNHPAAAVAAPIIQDGRLFDGAYKPDMTNCLEE 180
                                            ++++  +Q+  LFD AYKPD++NC E+
Sbjct: 121 VVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSSGKVQNTMLFDDAYKPDLSNCKED 180

Query: 181 TEMGSDFCSDSSCSSDSSRLGASSGGGFVDGLSMVQESMKFPVNAAALQAESEHSEDLEL 240
            +         SC   S+    S G G V     + + +  P     + A S     LEL
Sbjct: 181 FQ---------SCPPQSN---FSWGFGPVFDRFPIAQILDMPKTDGMIDAAS-----LEL 240

Query: 241 LAFERMKVERQISASLYAMNGVQEYMEAVHEASEAIWDLPPLCSLFC 261
             FERMKVERQISASLYA+NGV EYME V +++E +WDLPPLCSLFC
Sbjct: 241 SEFERMKVERQISASLYAINGVHEYMETVQDSNETLWDLPPLCSLFC 269

[Close]
BLAST of Carg12601 vs. Swiss-Prot
Match: sp|A9Y0K8|ERN2_MEDTR (Ethylene-responsive transcription factor ERN2 OS=Medicago truncatula OX=3880 GN=ERN2 PE=1 SV=2)

HSP 1 Score: 164.9 bits (416), Expect = 1.2e-39
Identity = 131/333 (39.34%), Postives = 158/333 (47.45%), Query Frame = 0 

Query: 1   MEIHFQSPGTHGGATASLGKSSKFKGRT-RGNNANKFVGVRQRPSGRWVAEIKDTTKKIR 60
           MEI F  P      +    K +KFKGR  +    +KFVGVRQRPSGR+VAEIKDTT+ IR
Sbjct: 1   MEIQFDEP----KKSLRPKKVNKFKGRNKKSETRDKFVGVRQRPSGRYVAEIKDTTQNIR 60

Query: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNSR----KNQ 120
           MWLGTFETAEEAARAYDEAA LLRGS TRTNF+  +S +SP+ASRIR LLN+R    K Q
Sbjct: 61  MWLGTFETAEEAARAYDEAATLLRGSKTRTNFVTHVSYDSPLASRIRHLLNNRKKGTKQQ 120

Query: 121 ILNPLKNHPAAA------------------------------------------------ 180
            +N + +  + A                                                
Sbjct: 121 DMNGISSTTSHADTTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 ------------------------VAAPIIQDGRLFDGAYKPDMTNCLEETEMGSDFCSD 240
                                         Q   LF+ AY+PDM+N   E E  S     
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKPNLFEDAYRPDMSNLTNEYESSS---YK 240

Query: 241 SSCSSDSSRLGASSGGGFVDGLSMVQESMKFPVNAAALQAESEHSEDLELLAFERMKVER 257
           S+ S D   +       F   L M         N   L  +     D  +  FERMKVER
Sbjct: 241 SNVSWDFGPI--FDNFPFDQWLDM--------TNNDGLLCD---MVDKGVSEFERMKVER 300

[Close]
BLAST of Carg12601 vs. Swiss-Prot
Match: sp|Q6J9S1|RA211_ARATH (Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana OX=3702 GN=RAP2-11 PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 5.0e-33
Identity = 104/263 (39.54%), Postives = 131/263 (49.81%), Query Frame = 0 

Query: 23  KFKGRTRGNNANKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLL 82
           K K +++GN   KFVGVRQRPSG+WVAEIKDTT+KIRMWLGTFETAEEAARAYDEAACLL
Sbjct: 10  KTKEKSKGNK-TKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLL 69

Query: 83  RGSNTRTNFIPQISTNSPIASRIRSLLNSRKNQILNPLKNHPAAAVAAPIIQDGRL---- 142
           RGSNTRTNF      NS ++ +IR+LL+ ++                             
Sbjct: 70  RGSNTRTNFANHFPNNSQLSLKIRNLLHQKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 129

Query: 143 --------------FDGAYKPDMTNCLE-ETEMGSDFCSDSSCSSDSSRLGASSGGGFVD 202
                          +  Y+PD +   + ETE      S    S  + ++  +  GG   
Sbjct: 130 XXXXXXXXXXXXXPLNNVYRPDSSVIGQPETEGLQLPYSWPLVSGFNHQIPLAQAGGETH 189

Query: 203 GLSMVQESMKFPVNAAALQAESEHSEDLELLAFERMKVERQISASLYAMNGVQEYME--- 261
           G                      +S D  L   E   +ERQISASLYAMNG   Y +   
Sbjct: 190 G-----------------HLNDHYSTDQHLGLAE---IERQISASLYAMNGANSYYDNMN 249

[Close]
BLAST of Carg12601 vs. Swiss-Prot
Match: sp|A9Y0K9|ERN3_MEDTR (Ethylene-responsive transcription factor ERN3 OS=Medicago truncatula OX=3880 GN=ERN3 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.0e-25
Identity = 60/93 (64.52%), Postives = 74/93 (79.57%), Query Frame = 0 

Query: 32  NANKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNF 91
           N +KFVGVRQR SG+W AEIKDT+K IRMWLGT++TAEEAARAYDEAA LLRG+NTRTNF
Sbjct: 21  NRSKFVGVRQRASGKWAAEIKDTSKNIRMWLGTYKTAEEAARAYDEAAFLLRGTNTRTNF 80

Query: 92  --IPQISTNSPIASRIRSLLNSRKNQILNPLKN 123
                I TNSPI+ ++++LL+ +    L+  KN
Sbjct: 81  STTHSIPTNSPISLKLKNLLHRKSISNLSQSKN 113

[Close]
BLAST of Carg12601 vs. TrEMBL
Match: tr|A0A1S3B5E8|A0A1S3B5E8_CUCME (ethylene-responsive transcription factor RAP2-11-like OS=Cucumis melo OX=3656 GN=LOC103485987 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 2.5e-82
Identity = 181/269 (67.29%), Postives = 196/269 (72.86%), Query Frame = 0 

Query: 1   MEIHFQSPGTHGGATA-SLGKSSKFKGRTR-GNNANKFVGVRQRPSGRWVAEIKDTTKKI 60
           MEI FQS   HGGATA S+ KS+KFKGR R  NN NKFVGVRQRPSGRWVAEIKDTTKKI
Sbjct: 1   MEIDFQSSEIHGGATASSIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKI 60

Query: 61  RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNSRKNQILN 120
           RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLN++K     
Sbjct: 61  RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRK 120

Query: 121 PLKN-------HPAAAVAAPIIQDGRLFDGAYKPDMTNCLEETEMGSDFCSDSSCSSDSS 180
           PL+           +AV  P I+D  LF+GAYKPDMTNCLEE E+ S  C   SC S+S 
Sbjct: 121 PLETPTTSVAASAGSAVVGPSIKDDGLFEGAYKPDMTNCLEEREVSS--C--DSCCSESC 180

Query: 181 RLGASSGGGFVDGLSMVQESMKFPVNAAALQAESEHSEDLELLAFERMKVERQISASLYA 240
            LG S                         +  +  SE+LEL AFERMKVERQISASLYA
Sbjct: 181 ELGVS-----------------------LAENGTVSSEELELCAFERMKVERQISASLYA 240

Query: 241 MNGVQEYMEAVHEASEAIWDLPPLCSLFC 261
           +NGVQEYMEAVHEA+E IWDLPPLCSLFC
Sbjct: 241 INGVQEYMEAVHEANEPIWDLPPLCSLFC 242

[Close]
BLAST of Carg12601 vs. TrEMBL
Match: tr|A0A0A0L1B8|A0A0A0L1B8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192030 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.2e-68
Identity = 162/245 (66.12%), Postives = 176/245 (71.84%), Query Frame = 0 

Query: 1   MEIHFQSPGTHGGATASLGKSSKFKGRTR-GNNANKFVGVRQRPSGRWVAEIKDTTKKIR 60
           MEI FQSP  H GATAS+ KS+KFKGR R  NN NKFVGVRQRPSGRWVAEIKDTTKKIR
Sbjct: 1   MEIDFQSPEIHRGATASIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR 60

Query: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNSRKN-QILN 120
           MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLN++K      
Sbjct: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKP 120

Query: 121 PLKNHPAAAVAA------PIIQDGRLFDGAYKPDMTNCLEETEMGSDFCSDSSCSSDSSR 180
           P K   +AAV+A      P I+D  LF+GAYKPDMTNCLEE E+ S  C   SC S+S  
Sbjct: 121 PEKPTTSAAVSAGSAVVDPSIKDDGLFEGAYKPDMTNCLEEREVSS--C--DSCCSESCE 180

Query: 181 LGASSGGGFVDGLSMVQESMKFPVNAAALQAESEHSEDLELLAFERMKVERQISASLYAM 238
           LG S                         +  +  SE+LEL AFERMKVERQISASLYA+
Sbjct: 181 LGVS-----------------------LAENGTVSSEELELCAFERMKVERQISASLYAI 218

[Close]
BLAST of Carg12601 vs. TrEMBL
Match: tr|D7TI77|D7TI77_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0007g07250 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 4.7e-68
Identity = 157/281 (55.87%), Postives = 185/281 (65.84%), Query Frame = 0 

Query: 1   MEIHFQSPGTHGGATASLGKSSKFKGRTRGNNANKFVGVRQRPSGRWVAEIKDTTKKIRM 60
           MEI FQ P   G   A+  K  KFKGR R N+ NKFVGVRQRPSGRWVAEIKDTT+KIRM
Sbjct: 1   MEIQFQQP--KGAIPAT--KVRKFKGRNRSNSNNKFVGVRQRPSGRWVAEIKDTTQKIRM 60

Query: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNSRKNQILNPL 120
           WLGTFETAEEAARAYDEAACLLRGSNTRTNFIP +S+NSP+ASRIR+LL+++K       
Sbjct: 61  WLGTFETAEEAARAYDEAACLLRGSNTRTNFIPNVSSNSPLASRIRTLLDNKKGAKQPKQ 120

Query: 121 KNHPAAAV--------------------AAPIIQDGRLFDGAYKPDMTNCLEETEMGSDF 180
            +  ++ +                    ++  IQ+ +LFD AYKPD++NC EE E+G   
Sbjct: 121 TSVDSSNIXXXXXXXXXXXXXXXXXXXXSSEKIQETQLFDDAYKPDLSNCSEEVELG--- 180

Query: 181 CSDSSCSSDSSRLGASSGGGFVDGLSMVQESMKFPVNAAALQ-AESEHSEDLELLAFERM 240
                  S  S L      GF D  S  Q+ +  P N    + AE E SE      FERM
Sbjct: 181 -------SSESGLSWGFAAGF-DRFSFAQQVLDLPKNGGLQEAAEGEFSE------FERM 240

Query: 241 KVERQISASLYAMNGVQEYMEAVHEASEAIWDLPPLCSLFC 261
           KVERQISASLYAMNGVQEYM+ VH+ S+A+WDLPPLCSLFC
Sbjct: 241 KVERQISASLYAMNGVQEYMDTVHDPSDALWDLPPLCSLFC 260

[Close]
BLAST of Carg12601 vs. TrEMBL
Match: tr|A0A2R6QGT9|A0A2R6QGT9_ACTCH (Ethylene-responsive transcription factor RAP2-11 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc18195 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 4.8e-65
Identity = 154/296 (52.03%), Postives = 180/296 (60.81%), Query Frame = 0 

Query: 1   MEIHFQSPGTHGGATASLGKSSKFKG-RTRGNNANKFVGVRQRPSGRWVAEIKDTTKKIR 60
           MEI FQ    H      + K  KFKG R RGN  NKFVGVRQRPSGRWVAEIKDTT+KIR
Sbjct: 1   MEIQFQQ---HQKGAIPVSKMPKFKGIRGRGNGNNKFVGVRQRPSGRWVAEIKDTTQKIR 60

Query: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNSRK------ 120
           MWLGTFETAE+AARAYDEAACLLRGSNTRTNFI  +S +SP+ASRIR LLN++K      
Sbjct: 61  MWLGTFETAEDAARAYDEAACLLRGSNTRTNFITHVSHDSPLASRIRDLLNTKKAGKKPS 120

Query: 121 ----------------NQILNPLKNHPAA-------------AVAAPIIQDGRLFDGAYK 180
                              +N   N P+                ++  +QD +LFD AYK
Sbjct: 121 ENIYGGINSSNTYNSHTPPINTTTNIPSTXXXXXXXXXXDNETTSSGKLQDTQLFDDAYK 180

Query: 181 PDMTNCLEETEMGSDFCSDSSCSSDSSRLGASSGGGFVDGLSMVQESMKFPVNAAALQAE 240
           PD++NC+EE E+G         +S S   G +      D     QE ++ P N       
Sbjct: 181 PDLSNCIEEFELG---------TSQSGMFGHA-----FDRFPFNQELLELPRNVV----- 240

Query: 241 SEHSEDLELLAFERMKVERQISASLYAMNGVQEYMEAVHEASEAIWDLPPLCSLFC 261
           S  + +LE   F+RMKVERQISASLYAMNGVQEYME VH+ SEA WDLPPLCSLFC
Sbjct: 241 SHEASELEFSEFDRMKVERQISASLYAMNGVQEYMETVHDPSEAFWDLPPLCSLFC 274

[Close]
BLAST of Carg12601 vs. TrEMBL
Match: tr|A0A2C9VIB3|A0A2C9VIB3_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_08G145400 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 7.0e-64
Identity = 151/290 (52.07%), Postives = 179/290 (61.72%), Query Frame = 0 

Query: 1   MEIHFQSPGTHGGATASLGKSSKFKGRTRGNN-ANKFVGVRQRPSGRWVAEIKDTTKKIR 60
           MEI FQ    H  +   + K+SKFKGR + NN  NKFVGVRQRPSGRWVAEIKDTT+KIR
Sbjct: 1   MEIQFQQQKQHKKSGVLMNKTSKFKGRNKSNNXXNKFVGVRQRPSGRWVAEIKDTTQKIR 60

Query: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNSRKNQILNP 120
           MWLGTFETAEEAARAYD+AACLLRGSNTRTNFI  +S +SP+ASRIR+LLN++K+    P
Sbjct: 61  MWLGTFETAEEAARAYDQAACLLRGSNTRTNFITHVSLDSPLASRIRNLLNNKKSGQEQP 120

Query: 121 LKNH------PAAAV----------------------------AAPIIQDGRLFDGAYKP 180
            +        P+ ++                            +  II D + FD  YKP
Sbjct: 121 REEENLEISTPSTSILXXXXXXXXXXXXXXXXXXXXXXXXXTPSNEIINDTQFFDNVYKP 180

Query: 181 DMTNCLEETEMGSDFCSDSSCSSDSSRLGASSGGGFVDGLSMVQESMKFPVNAAALQAES 240
           DM+NC EE E+G          S  S L  SSG GF D     QE + FP +    +  +
Sbjct: 181 DMSNCREEFELG----------SSPSDLSWSSGPGF-DRFPFSQEVLDFPRHTLLPETIT 240

Query: 241 EHSEDLELLAFERMKVERQISASLYAMNGVQEYMEAVHEASEAIWDLPPL 256
            H   LE   F+RMKVERQISASLYAMNGVQEYME VH+  EA WDLPP+
Sbjct: 241 SH---LEFTEFDRMKVERQISASLYAMNGVQEYMETVHDPVEAFWDLPPI 276

The following BLAST results are available for this feature:
BLAST of Carg12601 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022925003.11.3e-141100.00ethylene-responsive transcription factor RAP2-11-like [Cucurbita moschata][more]
XP_023521910.17.1e-13797.31ethylene-responsive transcription factor RAP2-11-like [Cucurbita pepo subsp. pep... [more]
XP_022966432.12.7e-12890.98ethylene-responsive transcription factor RAP2-11-like [Cucurbita maxima][more]
XP_023545037.13.0e-8770.45ethylene-responsive transcription factor RAP2-11-like [Cucurbita pepo subsp. pep... [more]
XP_022978278.12.6e-8670.88ethylene-responsive transcription factor RAP2-11-like [Cucurbita maxima][more]
BLAST of Carg12601 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G19790.12.8e-3439.54related to AP2 11[more]
AT1G50640.15.3e-1750.56ethylene responsive element binding factor 3[more]
AT4G11140.15.8e-1662.71cytokinin response factor 1[more]
AT5G25390.27.6e-1650.56Integrase-type DNA-binding superfamily protein[more]
AT1G15360.11.0e-1570.18Integrase-type DNA-binding superfamily protein[more]
BLAST of Carg12601 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|A2Q5W1|ERN1_MEDTR5.0e-6552.76Ethylene-responsive transcription factor ERN1 OS=Medicago truncatula OX=3880 GN=... [more]
sp|A0A1X9PY88|ERN1_LOTJA1.6e-6350.87Ethylene-responsive transcription factor ERN1 OS=Lotus japonicus OX=34305 GN=ERN... [more]
sp|A9Y0K8|ERN2_MEDTR1.2e-3939.34Ethylene-responsive transcription factor ERN2 OS=Medicago truncatula OX=3880 GN=... [more]
sp|Q6J9S1|RA211_ARATH5.0e-3339.54Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana OX=3702... [more]
sp|A9Y0K9|ERN3_MEDTR3.0e-2564.52Ethylene-responsive transcription factor ERN3 OS=Medicago truncatula OX=3880 GN=... [more]
BLAST of Carg12601 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B5E8|A0A1S3B5E8_CUCME2.5e-8267.29ethylene-responsive transcription factor RAP2-11-like OS=Cucumis melo OX=3656 GN... [more]
tr|A0A0A0L1B8|A0A0A0L1B8_CUCSA1.2e-6866.12Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192030 PE=4 SV=1[more]
tr|D7TI77|D7TI77_VITVI4.7e-6855.87Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0007g07250 PE=4 SV=... [more]
tr|A0A2R6QGT9|A0A2R6QGT9_ACTCH4.8e-6552.03Ethylene-responsive transcription factor RAP2-11 like OS=Actinidia chinensis var... [more]
tr|A0A2C9VIB3|A0A2C9VIB3_MANES7.0e-6452.07Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_08G145400 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR036955AP2/ERF_dom_sf
IPR001471AP2/ERF_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg12601-RACarg12601-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 58..74
score: 70.05
coord: 36..47
score: 52.27
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 35..98
e-value: 1.3E-35
score: 134.3
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 35..84
e-value: 4.3E-13
score: 49.2
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 35..92
score: 19.757
IPR001471AP2/ERF domainCDDcd00018AP2coord: 35..91
e-value: 1.58786E-31
score: 111.595
IPR036955AP2/ERF domain superfamilyGENE3DG3DSA:3.30.730.10coord: 34..94
e-value: 1.1E-26
score: 94.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..35
NoneNo IPR availablePANTHERPTHR31194:SF20SUBFAMILY NOT NAMEDcoord: 1..115
coord: 133..249
NoneNo IPR availablePANTHERPTHR31194SHN SHINE , DNA BINDING / TRANSCRIPTION FACTORcoord: 1..115
NoneNo IPR availablePANTHERPTHR31194SHN SHINE , DNA BINDING / TRANSCRIPTION FACTORcoord: 133..249
IPR016177DNA-binding domain superfamilySUPERFAMILYSSF54171DNA-binding domaincoord: 35..92