Cla012123 (gene) Watermelon (97103) v1

Overview
NameCla012123
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionAP2/ERF domain-containing transcription factor (AHRD V1 **** B9I5W8_POPTR); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding
LocationChr4 : 15877814 .. 15878548 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATCGACTTCCAGTCCCCAGAAACCCACGGCGGAGCCGCCGCATCCGTAATAAAAACAAGCAAATTCAAAGGCAGAAACAGAGGTAACAACAATGGCAACAAGTTCGTCGGAGTCCGGCAACGGCCGTCGGGCAGATGGGTGGCGGAAATCAAAGACACGACGAAGAAAATCCGAATGTGGCTCGGAACTTTCGAGACCGCCGAAGAAGCCGCCCGTGCTTACGATGAAGCCGCTTGTCTTCTTCGAGGTTCCAACACAAGAACCAATTTCATTCCTCAAATCTCCACAAATTCCCCAATCGCTTCTAGAATCCGCACGCTCTTAAACACCAAAAAAACCCTAAATCGAAAACCCCTCGAAAATCCCACCATCACCACCACTACTTCCGCCGCCACCGCTGCTTCCGCCGTCGCTGATCCAACAATTCAGGACGATGGATTGTTCGACGGAGCTTATAAACCGGATATGACGAATTGTTTGGAAGAAAGAGAGATTAGTTCTTGCGAATCGTCTTGCTCTGATTCTTGTGGATTGGGGGTTTCGTTGGCGGAGAATACGGCGGCGAATTCAGAGGAATTGGAGTTATGTGCTTTTGAGAGAATGAAAGTTGAGAGGCAAATTTCAGCTTCTTTGTATGCTATCAATGGAGTTCAAGAGTATATGGAGGCTGTTCATGAAGCCTCTGAAGCCATTTGGGATCTTCCACCACTCTGTTCTTTGTTCTGTTGA

mRNA sequence

ATGGAAATCGACTTCCAGTCCCCAGAAACCCACGGCGGAGCCGCCGCATCCGTAATAAAAACAAGCAAATTCAAAGGCAGAAACAGAGGTAACAACAATGGCAACAAGTTCGTCGGAGTCCGGCAACGGCCGTCGGGCAGATGGGTGGCGGAAATCAAAGACACGACGAAGAAAATCCGAATGTGGCTCGGAACTTTCGAGACCGCCGAAGAAGCCGCCCGTGCTTACGATGAAGCCGCTTGTCTTCTTCGAGGTTCCAACACAAGAACCAATTTCATTCCTCAAATCTCCACAAATTCCCCAATCGCTTCTAGAATCCGCACGCTCTTAAACACCAAAAAAACCCTAAATCGAAAACCCCTCGAAAATCCCACCATCACCACCACTACTTCCGCCGCCACCGCTGCTTCCGCCGTCGCTGATCCAACAATTCAGGACGATGGATTGTTCGACGGAGCTTATAAACCGGATATGACGAATTGTTTGGAAGAAAGAGAGATTAGTTCTTGCGAATCGTCTTGCTCTGATTCTTGTGGATTGGGGGTTTCGTTGGCGGAGAATACGGCGGCGAATTCAGAGGAATTGGAGTTATGTGCTTTTGAGAGAATGAAAGTTGAGAGGCAAATTTCAGCTTCTTTGTATGCTATCAATGGAGTTCAAGAGTATATGGAGGCTGTTCATGAAGCCTCTGAAGCCATTTGGGATCTTCCACCACTCTGTTCTTTGTTCTGTTGA

Coding sequence (CDS)

ATGGAAATCGACTTCCAGTCCCCAGAAACCCACGGCGGAGCCGCCGCATCCGTAATAAAAACAAGCAAATTCAAAGGCAGAAACAGAGGTAACAACAATGGCAACAAGTTCGTCGGAGTCCGGCAACGGCCGTCGGGCAGATGGGTGGCGGAAATCAAAGACACGACGAAGAAAATCCGAATGTGGCTCGGAACTTTCGAGACCGCCGAAGAAGCCGCCCGTGCTTACGATGAAGCCGCTTGTCTTCTTCGAGGTTCCAACACAAGAACCAATTTCATTCCTCAAATCTCCACAAATTCCCCAATCGCTTCTAGAATCCGCACGCTCTTAAACACCAAAAAAACCCTAAATCGAAAACCCCTCGAAAATCCCACCATCACCACCACTACTTCCGCCGCCACCGCTGCTTCCGCCGTCGCTGATCCAACAATTCAGGACGATGGATTGTTCGACGGAGCTTATAAACCGGATATGACGAATTGTTTGGAAGAAAGAGAGATTAGTTCTTGCGAATCGTCTTGCTCTGATTCTTGTGGATTGGGGGTTTCGTTGGCGGAGAATACGGCGGCGAATTCAGAGGAATTGGAGTTATGTGCTTTTGAGAGAATGAAAGTTGAGAGGCAAATTTCAGCTTCTTTGTATGCTATCAATGGAGTTCAAGAGTATATGGAGGCTGTTCATGAAGCCTCTGAAGCCATTTGGGATCTTCCACCACTCTGTTCTTTGTTCTGTTGA

Protein sequence

MEIDFQSPETHGGAAASVIKTSKFKGRNRGNNNGNKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRTLLNTKKTLNRKPLENPTITTTTSAATAASAVADPTIQDDGLFDGAYKPDMTNCLEEREISSCESSCSDSCGLGVSLAENTAANSEELELCAFERMKVERQISASLYAINGVQEYMEAVHEASEAIWDLPPLCSLFC
Homology
[Close]
BLAST of Cla012123 vs. Swiss-Prot
Match: RA211_ARATH (Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana GN=RAP2-11 PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 3.5e-41
Identity = 108/256 (42.19%), Postives = 142/256 (55.47%), Query Frame = 1 

Query: 21  TSKFKGRNRGNNNGNKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAA 80
           T K K + +   N  KFVGVRQRPSG+WVAEIKDTT+KIRMWLGTFETAEEAARAYDEAA
Sbjct: 6   TPKQKTKEKSKGNKTKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAA 65

Query: 81  CLLRGSNTRTNFIPQISTNSPIASRIRTLLNTKKTLNR------KPLENPT------ITT 140
           CLLRGSNTRTNF      NS ++ +IR LL+ K+++ +      KP+ + T      I+T
Sbjct: 66  CLLRGSNTRTNFANHFPNNSQLSLKIRNLLHQKQSMKQQQQQQHKPVSSLTDCNINYIST 125

Query: 141 TTSAATAASAVADPTIQDDGLFDGAYKPDMTNCLEEREISSCESSCSDSCGLG----VSL 200
            TS  T  +      I      +  Y+PD ++ + + E    +   S     G    + L
Sbjct: 126 ATSLTTTTTTTTTTAIP----LNNVYRPD-SSVIGQPETEGLQLPYSWPLVSGFNHQIPL 185

Query: 201 AE----------NTAANSEELELCAFERMKVERQISASLYAINGVQEYME------AVHE 245
           A+          +  +  + L L      ++ERQISASLYA+NG   Y +      A+ +
Sbjct: 186 AQAGGETHGHLNDHYSTDQHLGLA-----EIERQISASLYAMNGANSYYDNMNAEYAIFD 245

[Close]
BLAST of Cla012123 vs. Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.8e-16
Identity = 58/172 (33.72%), Postives = 83/172 (48.26%), Query Frame = 1 

Query: 17  SVIKTSKFKG---RNRGNNNGNKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAA 76
           S I T+ F G   ++      N+F G+RQRP G+W AEI+D  K +R+WLGTF +AEEAA
Sbjct: 97  STITTAGFDGPAAKSAKRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAA 156

Query: 77  RAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRTLLNTKKTLNRKPLENPTITTTTSAA 136
           RAYD  A  +RG   + NF    +T     +   T    K ++ +KP   P      +A 
Sbjct: 157 RAYDAEARRIRGKKAKVNFPEAPTTAQKRRAGSTTAKAPKSSVEQKPTVKPAFNNLANAN 216

Query: 137 TAASAVAD-----PTIQDDGLFDGAYKPDMTNC--LEEREISSCESSCSDSC 179
                 A+     P +Q D +    + P M +   +E+  I+S + S S  C
Sbjct: 217 AFVYPSANFTSNKPFVQPDNM---PFVPAMNSAAPIEDPIINSDQGSNSFGC 265

[Close]
BLAST of Cla012123 vs. Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 5.2e-16
Identity = 44/107 (41.12%), Postives = 63/107 (58.88%), Query Frame = 1 

Query: 36  KFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQ 95
           KF GVRQRP G+W AEI+D  K++R+WLGT+ TAEEAA  YD AA  LRG +  TNF   
Sbjct: 121 KFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNFSVT 180

Query: 96  ISTNSPIASRIRTLLNTKKTLNRKPLENPTITTTTSAATAASAVADP 143
            +T +   +   + +  KK  N K  ++ T +++ S +++   +  P
Sbjct: 181 PTTATEKKAPPPSPVKKKKKKNNKSKKSVTASSSISRSSSNDCLCSP 227

[Close]
BLAST of Cla012123 vs. Swiss-Prot
Match: WIN1_ARATH (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana GN=WIN1 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.6e-15
Identity = 45/82 (54.88%), Postives = 54/82 (65.85%), Query Frame = 1 

Query: 36  KFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQ 95
           KF GVRQR  G WVAEI+    K R+WLGTFETAEEAARAYDEAA L+ G N +TNF P 
Sbjct: 6   KFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNF-PL 65

Query: 96  ISTNSPIASRIRTLLNTKKTLN 118
            + N+   S  +T ++   T++
Sbjct: 66  NNNNTGETSEGKTDISASSTMS 86

[Close]
BLAST of Cla012123 vs. Swiss-Prot
Match: LEP_ARATH (Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana GN=LEP PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.4e-15
Identity = 40/73 (54.79%), Postives = 50/73 (68.49%), Query Frame = 1 

Query: 21 TSKFKGRNRGNNNGNKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAA 80
          TS    + + +  G +F+GVR+RP GR+ AEI+D T K R WLGTF+TAEEAA AYD AA
Sbjct: 4  TSSKSKKKQDDQVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAALAYDRAA 63

Query: 81 CLLRGSNTRTNFI 94
            +RG+  RTNF+
Sbjct: 64 RSMRGTRARTNFV 76

[Close]
BLAST of Cla012123 vs. TrEMBL
Match: A0A0A0L1B8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G192030 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 1.5e-102
Identity = 189/221 (85.52%), Postives = 204/221 (92.31%), Query Frame = 1 

Query: 1   MEIDFQSPETHGGAAASVIKTSKFKGRNRGNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR 60
           MEIDFQSPE H GA AS+IK++KFKGRNR NNNGNKFVGVRQRPSGRWVAEIKDTTKKIR
Sbjct: 1   MEIDFQSPEIHRGATASIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR 60

Query: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRTLLNTKKTLNRKP 120
           MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIR+LLNTKKT+NRKP
Sbjct: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKP 120

Query: 121 LENPTITTTTSAATAASAVADPTIQDDGLFDGAYKPDMTNCLEEREISSCESSCSDSCGL 180
            E P   TT++A +A SAV DP+I+DDGLF+GAYKPDMTNCLEERE+SSC+S CS+SC L
Sbjct: 121 PEKP---TTSAAVSAGSAVVDPSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCEL 180

Query: 181 GVSLAENTAANSEELELCAFERMKVERQISASLYAINGVQE 222
           GVSLAEN   +SEELELCAFERMKVERQISASLYAINGVQE
Sbjct: 181 GVSLAENGTVSSEELELCAFERMKVERQISASLYAINGVQE 218

[Close]
BLAST of Cla012123 vs. TrEMBL
Match: A0A067L5C6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02710 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 2.4e-73
Identity = 151/267 (56.55%), Postives = 182/267 (68.16%), Query Frame = 1 

Query: 1   MEIDFQSPETHGGAAASVIKTSKFKGRNRGNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR 60
           MEI FQ  + H  ++  V KTSKFKGR+R NNN NKFVGVRQRPSGRWVAEIKDTT+KIR
Sbjct: 1   MEIQFQQQKQHKSSSVPVNKTSKFKGRHRPNNNNNKFVGVRQRPSGRWVAEIKDTTQKIR 60

Query: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRTLLNTKKTLNRKP 120
           MWLGTFETAEEAARAYDEAACLLRGSNTRTNFI Q+S +SP+ASRIR LL  KK   ++ 
Sbjct: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFITQVSLDSPLASRIRNLLKNKKAGKKQQ 120

Query: 121 LE----------NPTITTTTSAATAASAVADPT------IQDDGLFDGAYKPDMTNCLEE 180
            E          N T+TT+T  ++++S+  D +      + D   FD  YKPDM+NC EE
Sbjct: 121 REEENLEVSTPSNSTVTTSTCTSSSSSSSIDNSTPSGEIVNDTQFFDDVYKPDMSNCREE 180

Query: 181 REISSCESSCSDSCGLGVSLAENT-----------AANSEELELCAFERMKVERQISASL 240
            E+   +S  S   G G+     T              + +LE   F+RMKVERQISASL
Sbjct: 181 FELGPFQSDLSWGFGSGLDRFSFTQEVLDFPRNMLLPETSDLEFTEFDRMKVERQISASL 240

[Close]
BLAST of Cla012123 vs. TrEMBL
Match: D7TI77_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g07250 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 3.2e-73
Identity = 155/265 (58.49%), Postives = 186/265 (70.19%), Query Frame = 1 

Query: 1   MEIDFQSPETHGGAAASVIKTSKFKGRNRGNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR 60
           MEI FQ P+     A    K  KFKGRNR N+N NKFVGVRQRPSGRWVAEIKDTT+KIR
Sbjct: 1   MEIQFQQPK----GAIPATKVRKFKGRNRSNSN-NKFVGVRQRPSGRWVAEIKDTTQKIR 60

Query: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRTLLNTKK------ 120
           MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIP +S+NSP+ASRIRTLL+ KK      
Sbjct: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPNVSSNSPLASRIRTLLDNKKGAKQPK 120

Query: 121 --TLNRKPLENPTITTTTSAATA--ASAVADPTIQDDGLFDGAYKPDMTNCLEEREISSC 180
             +++   +    +T   S+ T+  +++++   IQ+  LFD AYKPD++NC EE E+ S 
Sbjct: 121 QTSVDSSNISTTIVTPCASSCTSSGSNSLSSEKIQETQLFDDAYKPDLSNCSEEVELGSS 180

Query: 181 ESSCSDSCGLG----------VSLAENTA-ANSEELELCAFERMKVERQISASLYAINGV 240
           ES  S     G          + L +N     + E E   FERMKVERQISASLYA+NGV
Sbjct: 181 ESGLSWGFAAGFDRFSFAQQVLDLPKNGGLQEAAEGEFSEFERMKVERQISASLYAMNGV 240

Query: 241 QEYMEAVHEASEAIWDLPPLCSLFC 245
           QEYM+ VH+ S+A+WDLPPLCSLFC
Sbjct: 241 QEYMDTVHDPSDALWDLPPLCSLFC 260

[Close]
BLAST of Cla012123 vs. TrEMBL
Match: I1N899_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G113100 PE=4 SV=2)

HSP 1 Score: 275.8 bits (704), Expect = 5.1e-71
Identity = 153/277 (55.23%), Postives = 187/277 (67.51%), Query Frame = 1 

Query: 1   MEIDFQSPET-HGGAAASVIKTSKFKGRNRGNNNGNKFVGVRQRPSGRWVAEIKDTTKKI 60
           MEI FQ P   H  +  ++ K  KFKGR+R NNN NKFVGVRQRPSGRWVAEIKDTT+KI
Sbjct: 1   MEIQFQQPNLQHQKSGIAITKGGKFKGRSR-NNNTNKFVGVRQRPSGRWVAEIKDTTQKI 60

Query: 61  RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRTLLNTKKTLNRK 120
           RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFI  +S +SP+ASRIR LLN +K + ++
Sbjct: 61  RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFITHVSLDSPLASRIRNLLNNRKGIKKE 120

Query: 121 PLEN--------PTITTTTSAATAAS-------------AVADPTIQDDGLFDGAYKPDM 180
              N        P ++TT+SA +  +             +++  T Q   LFD AYKPD+
Sbjct: 121 EDANANANNAPAPRVSTTSSATSTGTSSNSSNGNDNNDQSLSTVTTQSSNLFDDAYKPDL 180

Query: 181 TNCLEEREISSCESSCSDSCG-----------LGVSLAENTAANSEELELCAFERMKVER 240
           +NC EE E S  +S+ S   G             +   ++   N+ +L+L  FERMKVER
Sbjct: 181 SNCREEFE-SGHQSNTSWCFGPVFDRFPMAQIFDIPKIDDGLTNAADLDLSEFERMKVER 240

Query: 241 QISASLYAINGVQEYMEAVHEASEAIWDLPPLCSLFC 245
           QISASLYAINGVQEYME V +++E +WDLPPLCSLFC
Sbjct: 241 QISASLYAINGVQEYMETVQDSNETLWDLPPLCSLFC 275

[Close]
BLAST of Cla012123 vs. TrEMBL
Match: A0A0B2RSB3_GLYSO (Ethylene-responsive transcription factor RAP2-11 OS=Glycine soja GN=glysoja_011240 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 5.1e-71
Identity = 153/277 (55.23%), Postives = 187/277 (67.51%), Query Frame = 1 

Query: 1   MEIDFQSPET-HGGAAASVIKTSKFKGRNRGNNNGNKFVGVRQRPSGRWVAEIKDTTKKI 60
           MEI FQ P   H  +  ++ K  KFKGR+R NNN NKFVGVRQRPSGRWVAEIKDTT+KI
Sbjct: 1   MEIQFQQPNLQHQKSGIAITKGGKFKGRSR-NNNTNKFVGVRQRPSGRWVAEIKDTTQKI 60

Query: 61  RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRTLLNTKKTLNRK 120
           RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFI  +S +SP+ASRIR LLN +K + ++
Sbjct: 61  RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFITHVSLDSPLASRIRNLLNNRKGIKKE 120

Query: 121 PLEN--------PTITTTTSAATAAS-------------AVADPTIQDDGLFDGAYKPDM 180
              N        P ++TT+SA +  +             +++  T Q   LFD AYKPD+
Sbjct: 121 EDANANANNAPAPRVSTTSSATSTGTSSNSSNGNDNNDQSLSTVTTQSSNLFDDAYKPDL 180

Query: 181 TNCLEEREISSCESSCSDSCG-----------LGVSLAENTAANSEELELCAFERMKVER 240
           +NC EE E S  +S+ S   G             +   ++   N+ +L+L  FERMKVER
Sbjct: 181 SNCREEFE-SGHQSNTSWCFGPVFDRFPMAQIFDIPKIDDGLTNAADLDLSEFERMKVER 240

Query: 241 QISASLYAINGVQEYMEAVHEASEAIWDLPPLCSLFC 245
           QISASLYAINGVQEYME V +++E +WDLPPLCSLFC
Sbjct: 241 QISASLYAINGVQEYMETVQDSNETLWDLPPLCSLFC 275

[Close]
BLAST of Cla012123 vs. NCBI nr
Match: gi|449462796|ref|XP_004149126.1| (PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Cucumis sativus])

HSP 1 Score: 428.7 bits (1101), Expect = 6.8e-117
Identity = 211/244 (86.48%), Postives = 226/244 (92.62%), Query Frame = 1 

Query: 1   MEIDFQSPETHGGAAASVIKTSKFKGRNRGNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR 60
           MEIDFQSPE H GA AS+IK++KFKGRNR NNNGNKFVGVRQRPSGRWVAEIKDTTKKIR
Sbjct: 1   MEIDFQSPEIHRGATASIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR 60

Query: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRTLLNTKKTLNRKP 120
           MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIR+LLNTKKT+NRKP
Sbjct: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKP 120

Query: 121 LENPTITTTTSAATAASAVADPTIQDDGLFDGAYKPDMTNCLEEREISSCESSCSDSCGL 180
            E P   TT++A +A SAV DP+I+DDGLF+GAYKPDMTNCLEERE+SSC+S CS+SC L
Sbjct: 121 PEKP---TTSAAVSAGSAVVDPSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCEL 180

Query: 181 GVSLAENTAANSEELELCAFERMKVERQISASLYAINGVQEYMEAVHEASEAIWDLPPLC 240
           GVSLAEN   +SEELELCAFERMKVERQISASLYAINGVQEYMEAVHEASE IWDLPPLC
Sbjct: 181 GVSLAENGTVSSEELELCAFERMKVERQISASLYAINGVQEYMEAVHEASEPIWDLPPLC 240

Query: 241 SLFC 245
           SLFC
Sbjct: 241 SLFC 241

[Close]
BLAST of Cla012123 vs. NCBI nr
Match: gi|659082707|ref|XP_008441991.1| (PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Cucumis melo])

HSP 1 Score: 423.7 bits (1088), Expect = 2.2e-115
Identity = 211/245 (86.12%), Postives = 227/245 (92.65%), Query Frame = 1 

Query: 1   MEIDFQSPETHGGA-AASVIKTSKFKGRNRGNNNGNKFVGVRQRPSGRWVAEIKDTTKKI 60
           MEIDFQS E HGGA A+S+IK++KFKGRNR NNNGNKFVGVRQRPSGRWVAEIKDTTKKI
Sbjct: 1   MEIDFQSSEIHGGATASSIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKI 60

Query: 61  RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRTLLNTKKTLNRK 120
           RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIR+LLNTKKT+NRK
Sbjct: 61  RMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRK 120

Query: 121 PLENPTITTTTSAATAASAVADPTIQDDGLFDGAYKPDMTNCLEEREISSCESSCSDSCG 180
           PLE P   TT+ AA+A SAV  P+I+DDGLF+GAYKPDMTNCLEERE+SSC+S CS+SC 
Sbjct: 121 PLETP---TTSVAASAGSAVVGPSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCE 180

Query: 181 LGVSLAENTAANSEELELCAFERMKVERQISASLYAINGVQEYMEAVHEASEAIWDLPPL 240
           LGVSLAEN   +SEELELCAFERMKVERQISASLYAINGVQEYMEAVHEA+E IWDLPPL
Sbjct: 181 LGVSLAENGTVSSEELELCAFERMKVERQISASLYAINGVQEYMEAVHEANEPIWDLPPL 240

Query: 241 CSLFC 245
           CSLFC
Sbjct: 241 CSLFC 242

[Close]
BLAST of Cla012123 vs. NCBI nr
Match: gi|700198773|gb|KGN53931.1| (hypothetical protein Csa_4G192030 [Cucumis sativus])

HSP 1 Score: 380.6 bits (976), Expect = 2.1e-102
Identity = 189/221 (85.52%), Postives = 204/221 (92.31%), Query Frame = 1 

Query: 1   MEIDFQSPETHGGAAASVIKTSKFKGRNRGNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR 60
           MEIDFQSPE H GA AS+IK++KFKGRNR NNNGNKFVGVRQRPSGRWVAEIKDTTKKIR
Sbjct: 1   MEIDFQSPEIHRGATASIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR 60

Query: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRTLLNTKKTLNRKP 120
           MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIR+LLNTKKT+NRKP
Sbjct: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKP 120

Query: 121 LENPTITTTTSAATAASAVADPTIQDDGLFDGAYKPDMTNCLEEREISSCESSCSDSCGL 180
            E P   TT++A +A SAV DP+I+DDGLF+GAYKPDMTNCLEERE+SSC+S CS+SC L
Sbjct: 121 PEKP---TTSAAVSAGSAVVDPSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCEL 180

Query: 181 GVSLAENTAANSEELELCAFERMKVERQISASLYAINGVQE 222
           GVSLAEN   +SEELELCAFERMKVERQISASLYAINGVQE
Sbjct: 181 GVSLAENGTVSSEELELCAFERMKVERQISASLYAINGVQE 218

[Close]
BLAST of Cla012123 vs. NCBI nr
Match: gi|802585450|ref|XP_012070434.1| (PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Jatropha curcas])

HSP 1 Score: 283.5 bits (724), Expect = 3.5e-73
Identity = 151/267 (56.55%), Postives = 182/267 (68.16%), Query Frame = 1 

Query: 1   MEIDFQSPETHGGAAASVIKTSKFKGRNRGNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR 60
           MEI FQ  + H  ++  V KTSKFKGR+R NNN NKFVGVRQRPSGRWVAEIKDTT+KIR
Sbjct: 1   MEIQFQQQKQHKSSSVPVNKTSKFKGRHRPNNNNNKFVGVRQRPSGRWVAEIKDTTQKIR 60

Query: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRTLLNTKKTLNRKP 120
           MWLGTFETAEEAARAYDEAACLLRGSNTRTNFI Q+S +SP+ASRIR LL  KK   ++ 
Sbjct: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFITQVSLDSPLASRIRNLLKNKKAGKKQQ 120

Query: 121 LE----------NPTITTTTSAATAASAVADPT------IQDDGLFDGAYKPDMTNCLEE 180
            E          N T+TT+T  ++++S+  D +      + D   FD  YKPDM+NC EE
Sbjct: 121 REEENLEVSTPSNSTVTTSTCTSSSSSSSIDNSTPSGEIVNDTQFFDDVYKPDMSNCREE 180

Query: 181 REISSCESSCSDSCGLGVSLAENT-----------AANSEELELCAFERMKVERQISASL 240
            E+   +S  S   G G+     T              + +LE   F+RMKVERQISASL
Sbjct: 181 FELGPFQSDLSWGFGSGLDRFSFTQEVLDFPRNMLLPETSDLEFTEFDRMKVERQISASL 240

[Close]
BLAST of Cla012123 vs. NCBI nr
Match: gi|225441591|ref|XP_002281619.1| (PREDICTED: ethylene-responsive transcription factor RAP2-11 [Vitis vinifera])

HSP 1 Score: 283.1 bits (723), Expect = 4.6e-73
Identity = 155/265 (58.49%), Postives = 186/265 (70.19%), Query Frame = 1 

Query: 1   MEIDFQSPETHGGAAASVIKTSKFKGRNRGNNNGNKFVGVRQRPSGRWVAEIKDTTKKIR 60
           MEI FQ P+     A    K  KFKGRNR N+N NKFVGVRQRPSGRWVAEIKDTT+KIR
Sbjct: 1   MEIQFQQPK----GAIPATKVRKFKGRNRSNSN-NKFVGVRQRPSGRWVAEIKDTTQKIR 60

Query: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRTLLNTKK------ 120
           MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIP +S+NSP+ASRIRTLL+ KK      
Sbjct: 61  MWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPNVSSNSPLASRIRTLLDNKKGAKQPK 120

Query: 121 --TLNRKPLENPTITTTTSAATA--ASAVADPTIQDDGLFDGAYKPDMTNCLEEREISSC 180
             +++   +    +T   S+ T+  +++++   IQ+  LFD AYKPD++NC EE E+ S 
Sbjct: 121 QTSVDSSNISTTIVTPCASSCTSSGSNSLSSEKIQETQLFDDAYKPDLSNCSEEVELGSS 180

Query: 181 ESSCSDSCGLG----------VSLAENTA-ANSEELELCAFERMKVERQISASLYAINGV 240
           ES  S     G          + L +N     + E E   FERMKVERQISASLYA+NGV
Sbjct: 181 ESGLSWGFAAGFDRFSFAQQVLDLPKNGGLQEAAEGEFSEFERMKVERQISASLYAMNGV 240

Query: 241 QEYMEAVHEASEAIWDLPPLCSLFC 245
           QEYM+ VH+ S+A+WDLPPLCSLFC
Sbjct: 241 QEYMDTVHDPSDALWDLPPLCSLFC 260

The following BLAST results are available for this feature:
BLAST of Cla012123 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RA211_ARATH3.5e-4142.19Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana GN=RAP2... [more]
ERF1_ORYSJ1.8e-1633.72Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=ER... [more]
CRF2_ARATH5.2e-1641.12Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE... [more]
WIN1_ARATH2.6e-1554.88Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana GN=WIN1 PE... [more]
LEP_ARATH4.4e-1554.79Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana GN=LEP PE=2... [more]
BLAST of Cla012123 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1B8_CUCSA1.5e-10285.52Uncharacterized protein OS=Cucumis sativus GN=Csa_4G192030 PE=4 SV=1[more]
A0A067L5C6_JATCU2.4e-7356.55Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02710 PE=4 SV=1[more]
D7TI77_VITVI3.2e-7358.49Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g07250 PE=4 SV=... [more]
I1N899_SOYBN5.1e-7155.23Uncharacterized protein OS=Glycine max GN=GLYMA_19G113100 PE=4 SV=2[more]
A0A0B2RSB3_GLYSO5.1e-7155.23Ethylene-responsive transcription factor RAP2-11 OS=Glycine soja GN=glysoja_0112... [more]
BLAST of Cla012123 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449462796|ref|XP_004149126.1|6.8e-11786.48PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Cucumis sativu... [more]
gi|659082707|ref|XP_008441991.1|2.2e-11586.12PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Cucumis melo][more]
gi|700198773|gb|KGN53931.1|2.1e-10285.52hypothetical protein Csa_4G192030 [Cucumis sativus][more]
gi|802585450|ref|XP_012070434.1|3.5e-7356.55PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Jatropha curca... [more]
gi|225441591|ref|XP_002281619.1|4.6e-7358.49PREDICTED: ethylene-responsive transcription factor RAP2-11 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
IPR017392AP2/ERF-transcript_factor
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0009877 nodulation
biological_process GO:0045893 positive regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0043565 sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla012123Cla012123.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 59..75
score: 7.7E-8coord: 37..48
score: 7.
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 36..92
score: 3.7
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 36..85
score: 2.8
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 36..99
score: 1.3
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 36..93
score: 19
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 36..93
score: 1.9
IPR017392AP2/ERF transcription factor ERF/PTI6PANTHERPTHR31194SHN SHINE , DNA BINDING / TRANSCRIPTION FACTORcoord: 35..241
score: 8.2
NoneNo IPR availablePANTHERPTHR31194:SF5SUBFAMILY NOT NAMEDcoord: 35..241
score: 8.2