Csa4G192030.1 (mRNA) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAATTGACTTCCAGTCGCCGGAGATCCACCGCGGAGCCACCGCCTCCATAATAAAATCAACCAAATTCAAAGGCAGAAACAGAAGTAACAATAATGGCAACAAGTTCGTCGGAGTCCGGCAACGGCCGTCCGGCAGATGGGTAGCGGAAATCAAAGACACAACGAAGAAAATTCGAATGTGGCTCGGAACTTTCGAGACCGCCGAAGAAGCCGCCCGTGCTTACGATGAAGCCGCTTGTCTTCTTCGAGGTTCGAACACAAGAACCAATTTCATTCCTCAAATCTCAACAAATTCCCCAATCGCTTCTCGGATTCGTTCTCTCTTAAACACCAAAAAAACCGTAAATCGAAAACCCCCGGAAAAACCCACCACCTCCGCCGCCGTCTCTGCCGGTTCCGCCGTCGTGGACCCGTCAATTAAAGACGATGGATTGTTCGAGGGAGCGTATAAACCGGATATGACTAATTGTTTGGAAGAAAGAGAGGTGAGTTCTTGTGATTCGTGTTGCTCTGAATCTTGTGAATTGGGGGTTTCATTGGCGGAGAATGGGACAGTGAGTTCAGAGGAATTGGAGTTGTGTGCTTTTGAGAGAATGAAAGTTGAGAGACAAATTTCAGCCTCTTTGTATGCTATTAATGGAGTTCAAGAGTATATGGAGGCTGTTCATGAAGCTTCTGAACCCATTTGGGATCTTCCACCACTCTGTTCTTTGTTCTGTTGACGATGATGAAGAAGAAGAAGAAGAAGACAAAGAAAGGGTTTTCTGTTTCTTTCTCTCCCTCTTTTTTGGTTTAAATTTTGTATACAAATTTGTATGTTGATGATCATAAAAGGTAAATTAAAGAAATTAAATGCAACTTTATGTTTTTGTTTCAAAAATATATATATTTCTCTTATTTCCAAATTTCTACTCTCTTTTTTATTCATTTGATCGTTTCGTCTCTTCTGCTGAAGGTGGAGTTGAACCATGCTAATGCATTTTTTCCCTCTCATCTACGTGATTCTAACTCAATACAAATGTGATCTTTTGGTTATACGAATAATATCATATAATATAAAAGAAAATACGTAACCTTCCATGAATAAGAGATTTGAGCCAAATAATTTCACGTTGTCTCTTTTAACATATGTTTACACGCTATACTGATTAAGTTTCAAAAGTAATTGTTTCCACGATAGAAAATATTACCTTTCTCATACAAGCAAAACATTAGCTCTACTTTGTAGAATAAAGAAAACTCGTAAGGGAGACAAATGTCAAAATCTCCTTTGAAGAAGGGACATATTTATAGATTAATTTGTATCATTTGGATAATATGTTCCTTCTTCAAGTTGGTTAAAATTTGAGATGAAGATATATCGATGAAAGAATGCAACTAATGAAATTGAAACTAGAACACTAGACGATAATGAAAGTTTTTTTTTTCCCTTCATATTTTGGTGTTGAAGTTTTAGGAATGACCCTTGTAATGATTCATAG ATGGAAATTGACTTCCAGTCGCCGGAGATCCACCGCGGAGCCACCGCCTCCATAATAAAATCAACCAAATTCAAAGGCAGAAACAGAAGTAACAATAATGGCAACAAGTTCGTCGGAGTCCGGCAACGGCCGTCCGGCAGATGGGTAGCGGAAATCAAAGACACAACGAAGAAAATTCGAATGTGGCTCGGAACTTTCGAGACCGCCGAAGAAGCCGCCCGTGCTTACGATGAAGCCGCTTGTCTTCTTCGAGGTTCGAACACAAGAACCAATTTCATTCCTCAAATCTCAACAAATTCCCCAATCGCTTCTCGGATTCGTTCTCTCTTAAACACCAAAAAAACCGTAAATCGAAAACCCCCGGAAAAACCCACCACCTCCGCCGCCGTCTCTGCCGGTTCCGCCGTCGTGGACCCGTCAATTAAAGACGATGGATTGTTCGAGGGAGCGTATAAACCGGATATGACTAATTGTTTGGAAGAAAGAGAGGTGAGTTCTTGTGATTCGTGTTGCTCTGAATCTTGTGAATTGGGGGTTTCATTGGCGGAGAATGGGACAGTGAGTTCAGAGGAATTGGAGTTGTGTGCTTTTGAGAGAATGAAAGTTGAGAGACAAATTTCAGCCTCTTTGTATGCTATTAATGGAGTTCAAGAGAATGACCCTTGTAATGATTCATAG ATGGAAATTGACTTCCAGTCGCCGGAGATCCACCGCGGAGCCACCGCCTCCATAATAAAATCAACCAAATTCAAAGGCAGAAACAGAAGTAACAATAATGGCAACAAGTTCGTCGGAGTCCGGCAACGGCCGTCCGGCAGATGGGTAGCGGAAATCAAAGACACAACGAAGAAAATTCGAATGTGGCTCGGAACTTTCGAGACCGCCGAAGAAGCCGCCCGTGCTTACGATGAAGCCGCTTGTCTTCTTCGAGGTTCGAACACAAGAACCAATTTCATTCCTCAAATCTCAACAAATTCCCCAATCGCTTCTCGGATTCGTTCTCTCTTAAACACCAAAAAAACCGTAAATCGAAAACCCCCGGAAAAACCCACCACCTCCGCCGCCGTCTCTGCCGGTTCCGCCGTCGTGGACCCGTCAATTAAAGACGATGGATTGTTCGAGGGAGCGTATAAACCGGATATGACTAATTGTTTGGAAGAAAGAGAGGTGAGTTCTTGTGATTCGTGTTGCTCTGAATCTTGTGAATTGGGGGTTTCATTGGCGGAGAATGGGACAGTGAGTTCAGAGGAATTGGAGTTGTGTGCTTTTGAGAGAATGAAAGTTGAGAGACAAATTTCAGCCTCTTTGTATGCTATTAATGGAGTTCAAGAGAATGACCCTTGTAATGATTCATAG MEIDFQSPEIHRGATASIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKPPEKPTTSAAVSAGSAVVDPSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCELGVSLAENGTVSSEELELCAFERMKVERQISASLYAINGVQENDPCNDS*
BLAST of Csa4G192030.1 vs. Swiss-Prot
Match: RA211_ARATH (Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana GN=RAP2-11 PE=2 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 1.9e-33 Identity = 92/213 (43.19%), Postives = 124/213 (58.22%), Query Frame = 1
BLAST of Csa4G192030.1 vs. Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=1 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 7.4e-17 Identity = 46/100 (46.00%), Postives = 60/100 (60.00%), Query Frame = 1
BLAST of Csa4G192030.1 vs. Swiss-Prot
Match: LEP_ARATH (Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana GN=LEP PE=2 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 9.6e-17 Identity = 60/175 (34.29%), Postives = 89/175 (50.86%), Query Frame = 1
BLAST of Csa4G192030.1 vs. Swiss-Prot
Match: ABI4_ARATH (Ethylene-responsive transcription factor ABI4 OS=Arabidopsis thaliana GN=ABI4 PE=1 SV=2) HSP 1 Score: 85.9 bits (211), Expect = 6.2e-16 Identity = 49/121 (40.50%), Postives = 64/121 (52.89%), Query Frame = 1
BLAST of Csa4G192030.1 vs. Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 8.1e-16 Identity = 50/127 (39.37%), Postives = 68/127 (53.54%), Query Frame = 1
BLAST of Csa4G192030.1 vs. TrEMBL
Match: A0A0A0L1B8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G192030 PE=4 SV=1) HSP 1 Score: 452.2 bits (1162), Expect = 3.7e-124 Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 1
BLAST of Csa4G192030.1 vs. TrEMBL
Match: D7TI77_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g07250 PE=4 SV=1) HSP 1 Score: 235.7 bits (600), Expect = 5.4e-59 Identity = 141/244 (57.79%), Postives = 167/244 (68.44%), Query Frame = 1
BLAST of Csa4G192030.1 vs. TrEMBL
Match: A0A067L5C6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02710 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 3.5e-58 Identity = 131/248 (52.82%), Postives = 162/248 (65.32%), Query Frame = 1
BLAST of Csa4G192030.1 vs. TrEMBL
Match: I1N899_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G113100 PE=4 SV=2) HSP 1 Score: 232.6 bits (592), Expect = 4.6e-58 Identity = 136/253 (53.75%), Postives = 165/253 (65.22%), Query Frame = 1
BLAST of Csa4G192030.1 vs. TrEMBL
Match: A0A0B2RSB3_GLYSO (Ethylene-responsive transcription factor RAP2-11 OS=Glycine soja GN=glysoja_011240 PE=4 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 4.6e-58 Identity = 136/253 (53.75%), Postives = 165/253 (65.22%), Query Frame = 1
BLAST of Csa4G192030.1 vs. TAIR10
Match: AT5G19790.1 (AT5G19790.1 related to AP2 11) HSP 1 Score: 144.1 bits (362), Expect = 1.1e-34 Identity = 92/213 (43.19%), Postives = 124/213 (58.22%), Query Frame = 1
BLAST of Csa4G192030.1 vs. TAIR10
Match: AT4G23750.1 (AT4G23750.1 cytokinin response factor 2) HSP 1 Score: 89.0 bits (219), Expect = 4.1e-18 Identity = 46/100 (46.00%), Postives = 60/100 (60.00%), Query Frame = 1
BLAST of Csa4G192030.1 vs. TAIR10
Match: AT5G13910.1 (AT5G13910.1 Integrase-type DNA-binding superfamily protein) HSP 1 Score: 88.6 bits (218), Expect = 5.4e-18 Identity = 60/175 (34.29%), Postives = 89/175 (50.86%), Query Frame = 1
BLAST of Csa4G192030.1 vs. TAIR10
Match: AT2G40220.1 (AT2G40220.1 Integrase-type DNA-binding superfamily protein) HSP 1 Score: 85.9 bits (211), Expect = 3.5e-17 Identity = 49/121 (40.50%), Postives = 64/121 (52.89%), Query Frame = 1
BLAST of Csa4G192030.1 vs. TAIR10
Match: AT5G18560.1 (AT5G18560.1 Integrase-type DNA-binding superfamily protein) HSP 1 Score: 84.0 bits (206), Expect = 1.3e-16 Identity = 49/115 (42.61%), Postives = 65/115 (56.52%), Query Frame = 1
BLAST of Csa4G192030.1 vs. NCBI nr
Match: gi|700198773|gb|KGN53931.1| (hypothetical protein Csa_4G192030 [Cucumis sativus]) HSP 1 Score: 452.2 bits (1162), Expect = 5.3e-124 Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 1
BLAST of Csa4G192030.1 vs. NCBI nr
Match: gi|449462796|ref|XP_004149126.1| (PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Cucumis sativus]) HSP 1 Score: 435.3 bits (1118), Expect = 6.7e-119 Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 1
BLAST of Csa4G192030.1 vs. NCBI nr
Match: gi|659082707|ref|XP_008441991.1| (PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Cucumis melo]) HSP 1 Score: 412.9 bits (1060), Expect = 3.6e-112 Identity = 211/219 (96.35%), Postives = 211/219 (96.35%), Query Frame = 1
BLAST of Csa4G192030.1 vs. NCBI nr
Match: gi|225441591|ref|XP_002281619.1| (PREDICTED: ethylene-responsive transcription factor RAP2-11 [Vitis vinifera]) HSP 1 Score: 235.7 bits (600), Expect = 7.8e-59 Identity = 141/244 (57.79%), Postives = 167/244 (68.44%), Query Frame = 1
BLAST of Csa4G192030.1 vs. NCBI nr
Match: gi|802585450|ref|XP_012070434.1| (PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Jatropha curcas]) HSP 1 Score: 233.0 bits (593), Expect = 5.0e-58 Identity = 131/248 (52.82%), Postives = 162/248 (65.32%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
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