Csa3G198460 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGAGGAGGAAGAAAGGAAGGAAGAAAGAAGATGTTAGGATTCTCGAAAGCAGAGTCAAAATCAAAATCCTAAAACTCCAGAATGCTAACCCATGTAAAAGGTCCACTTCCCCCAACTCCACCAACCCTACCACATCCTAATTGGAACACCACCGTCCTCCGATTCACCGCTCCCCTCGCCCTTACCACATCCACTTGCCGTATAGCAACCACTGCGGCAGCGATTCTCGCAGCTGCAGCCGTGATTGCTTCGCCTCCCCCGTCTGCCGCCACCGAGACCAGCGCTACCTTATCAGAACAACAAGAAGAAAGTAGTACGCTGTCGAACATTCCGCAGACTCTTTCCGGCGAGTGCGCGCAGCCGAGCGACTGCAAGAAGGCGAGAATTCAACGGCCGAAGTCGAGGAAGGCGGAATCTTGCACGATAAAGTGCGTGGGAACTTGCATTAGAGGCGGCGATGGATCTCCCGGAGAAGGGCCTCTGAACATCAGGAGGTAATAATTAGTAGAAATTGTTGAGAATTAAGTGGAATTGTTAGTGATTGATGTGGAAAATTTTGTTGGTTTTGTAGACCAATTGTTGTTTTCAAGCAAGGGTTTCGAAGTCGTCAATACTGGTGCGTATGCGTCTCTTTAAATCTTCCAAGTTTGTTTTCTTTGATCTTATTTGATTTGAATGGTGATCCTTAATGATTGGTTGAGTTTTGGGGATGTTGCAGTTTGGTGGAATGTTCAGATATATGCAATTTGATCGGAGATGGTGATGATGGACCTTAACAACATTTTTCTCTTTCTTTTTTCTATATTTCTCCTCACATTTCTTTTTTCTCTTTCCTTTATTTCATTCATGAAATAAATTTTATGTCATTCTTTTTCCCCTAAAAACAATTCCTTCCAAATGCTGGATTACTTTAATTACAATATAATATTTTAATACTAATTCAAGCATTACAATC ATGCTAACCCATGTAAAAGGTCCACTTCCCCCAACTCCACCAACCCTACCACATCCTAATTGGAACACCACCGTCCTCCGATTCACCGCTCCCCTCGCCCTTACCACATCCACTTGCCGTATAGCAACCACTGCGGCAGCGATTCTCGCAGCTGCAGCCGTGATTGCTTCGCCTCCCCCGTCTGCCGCCACCGAGACCAGCGCTACCTTATCAGAACAACAAGAAGAAAGTAGTACGCTGTCGAACATTCCGCAGACTCTTTCCGGCGAGTGCGCGCAGCCGAGCGACTGCAAGAAGGCGAGAATTCAACGGCCGAAGTCGAGGAAGGCGGAATCTTGCACGATAAAGTGCGTGGGAACTTGCATTAGAGGCGGCGATGGATCTCCCGGAGAAGGGCCTCTGAACATCAGGAGGTAA ATGCTAACCCATGTAAAAGGTCCACTTCCCCCAACTCCACCAACCCTACCACATCCTAATTGGAACACCACCGTCCTCCGATTCACCGCTCCCCTCGCCCTTACCACATCCACTTGCCGTATAGCAACCACTGCGGCAGCGATTCTCGCAGCTGCAGCCGTGATTGCTTCGCCTCCCCCGTCTGCCGCCACCGAGACCAGCGCTACCTTATCAGAACAACAAGAAGAAAGTAGTACGCTGTCGAACATTCCGCAGACTCTTTCCGGCGAGTGCGCGCAGCCGAGCGACTGCAAGAAGGCGAGAATTCAACGGCCGAAGTCGAGGAAGGCGGAATCTTGCACGATAAAGTGCGTGGGAACTTGCATTAGAGGCGGCGATGGATCTCCCGGAGAAGGGCCTCTGAACATCAGGAGGTAA MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASPPPSAATETSATLSEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRR*
BLAST of Csa3G198460 vs. TrEMBL
Match: A0A0A0LA46_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G198460 PE=4 SV=1) HSP 1 Score: 352.8 bits (904), Expect = 2.3e-94 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 1
BLAST of Csa3G198460 vs. TrEMBL
Match: U5GB13_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s15070g PE=4 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 8.6e-49 Identity = 100/141 (70.92%), Postives = 111/141 (78.72%), Query Frame = 1
BLAST of Csa3G198460 vs. TrEMBL
Match: V4SMX7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029418mg PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 7.3e-48 Identity = 97/133 (72.93%), Postives = 112/133 (84.21%), Query Frame = 1
BLAST of Csa3G198460 vs. TrEMBL
Match: M5X7W8_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022787mg PE=4 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 1.2e-47 Identity = 100/124 (80.65%), Postives = 105/124 (84.68%), Query Frame = 1
BLAST of Csa3G198460 vs. TrEMBL
Match: A0A067FV54_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031102mg PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 2.8e-47 Identity = 96/133 (72.18%), Postives = 111/133 (83.46%), Query Frame = 1
BLAST of Csa3G198460 vs. TAIR10
Match: AT1G78995.1 (AT1G78995.1 unknown protein) HSP 1 Score: 165.2 bits (417), Expect = 3.5e-41 Identity = 88/146 (60.27%), Postives = 97/146 (66.44%), Query Frame = 1
BLAST of Csa3G198460 vs. NCBI nr
Match: gi|449445931|ref|XP_004140725.1| (PREDICTED: uncharacterized protein LOC101203967 [Cucumis sativus]) HSP 1 Score: 352.8 bits (904), Expect = 3.3e-94 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 1
BLAST of Csa3G198460 vs. NCBI nr
Match: gi|659112369|ref|XP_008456185.1| (PREDICTED: uncharacterized protein LOC103496200 [Cucumis melo]) HSP 1 Score: 342.4 bits (877), Expect = 4.5e-91 Identity = 166/171 (97.08%), Postives = 168/171 (98.25%), Query Frame = 1
BLAST of Csa3G198460 vs. NCBI nr
Match: gi|645280166|ref|XP_008245063.1| (PREDICTED: uncharacterized protein LOC103343169 [Prunus mume]) HSP 1 Score: 205.7 bits (522), Expect = 6.6e-50 Identity = 103/131 (78.63%), Postives = 108/131 (82.44%), Query Frame = 1
BLAST of Csa3G198460 vs. NCBI nr
Match: gi|566181421|ref|XP_006380835.1| (hypothetical protein POPTR_0007s15070g [Populus trichocarpa]) HSP 1 Score: 201.4 bits (511), Expect = 1.2e-48 Identity = 100/141 (70.92%), Postives = 111/141 (78.72%), Query Frame = 1
BLAST of Csa3G198460 vs. NCBI nr
Match: gi|470135985|ref|XP_004303783.1| (PREDICTED: uncharacterized protein LOC101303248 [Fragaria vesca subsp. vesca]) HSP 1 Score: 201.1 bits (510), Expect = 1.6e-48 Identity = 104/150 (69.33%), Postives = 117/150 (78.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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