CsGy3G017920 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G017920
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Mitochondrial import inner membrane translocase subunit tim-10 isoform 1
Location	Chr3 : 14011323 .. 14013161 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCCAATTTAATTCCGTTAAAGTCAACAAAGAAAATACAAAGTTCAAGTTGATGTAGTTATTAAGGCATAAAGTGCATAGGACATCCACATATTTGGAGGTTCTAACTTGAAATATGAGAAAACATAGTAGGAGGCGGTTGGAGAAATGGGGAAATGATTGATAGAAGTGAGTTTGGGCCGCAGAGGATTGTTGATGAGAAGTGAAGGATTTCGTCCTTTAAATAGGTTCAAGATTGGTTGTAAATGACTGAAACCCATGCTCTAAATAGTCCTTACAAAATTAGGGGTTAATGGAATTGAATAGTGATGAATATAATTGAATTGAAGGGTGGAAGAATAGTGATGCAAGTATAGTTTCCAATTTGGAGGGTAAAGCAAAATTTAATATGAAAAAACTTAAGACATAATTCATATGGACATTTTTGACACGTGGATCAACACCAATCTTGGAAAAAATAGAGTTTAAAAAATCAAAACGTACATTATCCAAAAGAAAGAGGAAGAAGAAGAGGAGGAGGAAGAAAGGAAGGAAGAAAGAAGATGTTAGGATTCTCGAAAGCAGAGTCAAAATCAAAATCCTAAAACTCCAGAATGCTAACCCATGTAAAAGGTCCACTTCCCCCAACTCCACCAACCCTACCACATCCTAATTGGAACACCACCGTCCTCCGATTCACCGCTCCCCTCGCCCTTACCACATCCACTTGCCGTATAGCAACCACTGCGGCAGCGATTCTCGCAGCTGCAGCTGTGATTGCTTCGCCTCCCCCGTCTGCCGCAACCGAGACCAGCGCTACCTTATCAGAACAACAAGAAGAAAGTAGTACGCTGTCGAACATTCCGCAGACTCTTTCCGGCGAGTGCGCGCAGCCGAGCGACTGCAAGAAGGCGAGAATTCAACGGCCGAAGTCGAGGAAGGCGGAATCTTGCACGATAAAGTGCGTGGGAACTTGCATTAGAGGCGGCGATGGATCTCCCGGAGAAGGGCCTCTGAACATCAGGAGGTAATAATTAGTAGAAATTGTTGAGAATTAAGTGGAATTGTTAGTGATTGATGTGGAAAATTTTGTTGGTTTTGTAGACCAATTGTTGTTTTCAAGCAAGGGTTTCGAAGTCGTCAATACTGGTGCGTATGCGTCTCTTTAAATCTTCCAAGTTTGTTTTCTTTGATCTTATTTGATTTGAATGGTGATCCTTAATGATTGGTTGAGTTTTGGGGATGTTGCAGTTTGGTGGAATGTTCAGATATATGCAATTTGATCGGAGATGGTGATGATGGACCTTAACAACATTTTTCTCTTTCTTTTTTCTATATTTCTCCTCACATTTCTTTTTTCTCTTTCCTTTATTTCATTCATGAAATAAATTTTATGTCATTCTTTTTCCCCTAAAAACAATTCCTTCCAAATGCTGGATTACTTTAATTACAATATAATATTTTAATACTAATTCAAGCATTACAATCACTAATATTCATATCTCACTGCAACTACTTTACTTTTTAGGGACTCATACCAATTAAATTGTAATCTATTACATTATTATCATTACTTTATAACTACTCAGATTTATAATTATTTTTTGTTATTACTTTTATAATATTTTGTAAATTTACTACCACTTACAAATTCTCACAATTCCATCAAATATGGACGATAATCTCCACATATTCCACTATTCTGCACAATTTTGGAAAAAGAAAAGAAAACCACTTCCACTAATTTCACTAACTTTACACTATTAAAGTGTCAAGAAAACTTTTAATTTCTAGATAGATAGTCACTTTCTTAAACTCATCACCTCTTTAGTTATAGAATCTTACTACATCAAATGAAAAC

mRNA sequence

GGCCAATTTAATTCCGTTAAAGTCAACAAAGAAAATACAAAGTTCAAGTTGATGTAGTTATTAAGGCATAAAGTGCATAGGACATCCACATATTTGGAGGTTCTAACTTGAAATATGAGAAAACATAGTAGGAGGCGGTTGGAGAAATGGGGAAATGATTGATAGAAGTGAGTTTGGGCCGCAGAGGATTGTTGATGAGAAGTGAAGGATTTCGTCCTTTAAATAGGTTCAAGATTGGTTGTAAATGACTGAAACCCATGCTCTAAATAGTCCTTACAAAATTAGGGGTTAATGGAATTGAATAGTGATGAATATAATTGAATTGAAGGGTGGAAGAATAGTGATGCAAGTATAGTTTCCAATTTGGAGGGTAAAGCAAAATTTAATATGAAAAAACTTAAGACATAATTCATATGGACATTTTTGACACGTGGATCAACACCAATCTTGGAAAAAATAGAGTTTAAAAAATCAAAACGTACATTATCCAAAAGAAAGAGGAAGAAGAAGAGGAGGAGGAAGAAAGGAAGGAAGAAAGAAGATGTTAGGATTCTCGAAAGCAGAGTCAAAATCAAAATCCTAAAACTCCAGAATGCTAACCCATGTAAAAGGTCCACTTCCCCCAACTCCACCAACCCTACCACATCCTAATTGGAACACCACCGTCCTCCGATTCACCGCTCCCCTCGCCCTTACCACATCCACTTGCCGTATAGCAACCACTGCGGCAGCGATTCTCGCAGCTGCAGCTGTGATTGCTTCGCCTCCCCCGTCTGCCGCAACCGAGACCAGCGCTACCTTATCAGAACAACAAGAAGAAAGTAGTACGCTGTCGAACATTCCGCAGACTCTTTCCGGCGAGTGCGCGCAGCCGAGCGACTGCAAGAAGGCGAGAATTCAACGGCCGAAGTCGAGGAAGGCGGAATCTTGCACGATAAAGTGCGTGGGAACTTGCATTAGAGGCGGCGATGGATCTCCCGGAGAAGGGCCTCTGAACATCAGGAGACCAATTGTTGTTTTCAAGCAAGGGTTTCGAAGTCGTCAATACTGTTTGGTGGAATGTTCAGATATATGCAATTTGATCGGAGATGGTGATGATGGACCTTAACAACATTTTTCTCTTTCTTTTTTCTATATTTCTCCTCACATTTCTTTTTTCTCTTTCCTTTATTTCATTCATGAAATAAATTTTATGTCATTCTTTTTCCCCTAAAAACAATTCCTTCCAAATGCTGGATTACTTTAATTACAATATAATATTTTAATACTAATTCAAGCATTACAATCACTAATATTCATATCTCACTGCAACTACTTTACTTTTTAGGGACTCATACCAATTAAATTGTAATCTATTACATTATTATCATTACTTTATAACTACTCAGATTTATAATTATTTTTTGTTATTACTTTTATAATATTTTGTAAATTTACTACCACTTACAAATTCTCACAATTCCATCAAATATGGACGATAATCTCCACATATTCCACTATTCTGCACAATTTTGGAAAAAGAAAAGAAAACCACTTCCACTAATTTCACTAACTTTACACTATTAAAGTGTCAAGAAAACTTTTAATTTCTAGATAGATAGTCACTTTCTTAAACTCATCACCTCTTTAGTTATAGAATCTTACTACATCAAATGAAAAC

Coding sequence (CDS)

ATGCTAACCCATGTAAAAGGTCCACTTCCCCCAACTCCACCAACCCTACCACATCCTAATTGGAACACCACCGTCCTCCGATTCACCGCTCCCCTCGCCCTTACCACATCCACTTGCCGTATAGCAACCACTGCGGCAGCGATTCTCGCAGCTGCAGCTGTGATTGCTTCGCCTCCCCCGTCTGCCGCAACCGAGACCAGCGCTACCTTATCAGAACAACAAGAAGAAAGTAGTACGCTGTCGAACATTCCGCAGACTCTTTCCGGCGAGTGCGCGCAGCCGAGCGACTGCAAGAAGGCGAGAATTCAACGGCCGAAGTCGAGGAAGGCGGAATCTTGCACGATAAAGTGCGTGGGAACTTGCATTAGAGGCGGCGATGGATCTCCCGGAGAAGGGCCTCTGAACATCAGGAGACCAATTGTTGTTTTCAAGCAAGGGTTTCGAAGTCGTCAATACTGTTTGGTGGAATGTTCAGATATATGCAATTTGATCGGAGATGGTGATGATGGACCTTAA

Protein sequence

MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASPPPSAATETSATLSEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP

Homology

[Close]

BLAST of CsGy3G017920 vs. NCBI nr
Match: XP_004140725.1 (PREDICTED: uncharacterized protein LOC101203967 [Cucumis sativus] >KGN57482.1 hypothetical protein Csa_3G198460 [Cucumis sativus])

HSP 1 Score: 270.4 bits (690), Expect = 4.2e-69
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIXXXXXXXXXXXXXXXXXXX 60
           MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120
           XXXXXXXXXXXXXXXXXXXLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT
Sbjct: 61  XXXXXXXXXXXXXXXXXXXLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120

Query: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 172
           CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP
Sbjct: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 171

[Close]

BLAST of CsGy3G017920 vs. NCBI nr
Match: XP_008456185.1 (PREDICTED: uncharacterized protein LOC103496200 [Cucumis melo])

HSP 1 Score: 265.0 bits (676), Expect = 1.8e-67
Identity = 167/171 (97.66%), Postives = 168/171 (98.25%), Query Frame = 0


Query: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIXXXXXXXXXXXXXXXXXXX 60
           ML+HVKGP PP PPTLPHPNWNTTVLRFTAPLALTTSTCRI XXXXXXXXXXXXXXXXXX
Sbjct: 1   MLSHVKGPFPPIPPTLPHPNWNTTVLRFTAPLALTTSTCRIAXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120
           XXXXXXXXXXXXXXXXXXXLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT
Sbjct: 61  XXXXXXXXXXXXXXXXXXXLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120

Query: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 172
           CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP
Sbjct: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 171

[Close]

BLAST of CsGy3G017920 vs. NCBI nr
Match: XP_022934222.1 (uncharacterized protein LOC111441457 isoform X2 [Cucurbita moschata])

HSP 1 Score: 240.7 bits (613), Expect = 3.6e-60
Identity = 156/171 (91.23%), Postives = 162/171 (94.74%), Query Frame = 0


Query: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIXXXXXXXXXXXXXXXXXXX 60
           M++HVKGP PP  P L HPNWN+ V+RFTAPLALT ++CRI XXXXXXXXXXXXXXXXXX
Sbjct: 1   MISHVKGPFPPI-PALAHPNWNSAVVRFTAPLALTRASCRIAXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120
           XXXXXXXXXXXXXXXXXXX SNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120

Query: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 172
           CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP
Sbjct: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 170

[Close]

BLAST of CsGy3G017920 vs. NCBI nr
Match: XP_022983921.1 (uncharacterized protein LOC111482398 isoform X2 [Cucurbita maxima])

HSP 1 Score: 240.7 bits (613), Expect = 3.6e-60
Identity = 157/171 (91.81%), Postives = 163/171 (95.32%), Query Frame = 0


Query: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIXXXXXXXXXXXXXXXXXXX 60
           M++HVKGP PP  P L HPNWN+ V+RFTAPLALT ++CRIXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MISHVKGPFPPI-PALAHPNWNSAVVRFTAPLALTRASCRIXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120
           XXXXXXXXXXXXXXXXXXX SNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120

Query: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 172
           CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP
Sbjct: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 170

[Close]

BLAST of CsGy3G017920 vs. NCBI nr
Match: XP_023526623.1 (uncharacterized protein LOC111790064 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 240.7 bits (613), Expect = 3.6e-60
Identity = 156/171 (91.23%), Postives = 162/171 (94.74%), Query Frame = 0


Query: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIXXXXXXXXXXXXXXXXXXX 60
           M++HVKGP PP  P L HPNWN+ V+RFTAPLALT ++CRI XXXXXXXXXXXXXXXXXX
Sbjct: 1   MISHVKGPFPPI-PALAHPNWNSAVVRFTAPLALTRASCRIAXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120
           XXXXXXXXXXXXXXXXXXX SNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120

Query: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 172
           CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP
Sbjct: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 170

[Close]

BLAST of CsGy3G017920 vs. TAIR10
Match: AT1G78995.1 (unknown protein)

HSP 1 Score: 152.1 bits (383), Expect = 3.0e-37
Identity = 72/92 (78.26%), Postives = 77/92 (83.70%), Query Frame = 0


Query: 80  LSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRP 139
           LSN+PQTLSGE     DCKK RIQRPKS+ AE CT+KCV TCIR GD   GEGP+NIRRP
Sbjct: 76  LSNVPQTLSGE-----DCKKQRIQRPKSKNAEKCTVKCVNTCIRSGD---GEGPINIRRP 135

Query: 140 IVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 172
           +VVFKQGFRSR YCLVECSDICNLIGDGD GP
Sbjct: 136 LVVFKQGFRSRNYCLVECSDICNLIGDGDYGP 159

[Close]

BLAST of CsGy3G017920 vs. TrEMBL
Match: tr|A0A0A0LA46|A0A0A0LA46_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G198460 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 2.8e-69
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIXXXXXXXXXXXXXXXXXXX 60
           MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120
           XXXXXXXXXXXXXXXXXXXLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT
Sbjct: 61  XXXXXXXXXXXXXXXXXXXLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120

Query: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 172
           CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP
Sbjct: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 171

[Close]

BLAST of CsGy3G017920 vs. TrEMBL
Match: tr|A0A1S3C289|A0A1S3C289_CUCME (uncharacterized protein LOC103496200 OS=Cucumis melo OX=3656 GN=LOC103496200 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.2e-67
Identity = 167/171 (97.66%), Postives = 168/171 (98.25%), Query Frame = 0


Query: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIXXXXXXXXXXXXXXXXXXX 60
           ML+HVKGP PP PPTLPHPNWNTTVLRFTAPLALTTSTCRI XXXXXXXXXXXXXXXXXX
Sbjct: 1   MLSHVKGPFPPIPPTLPHPNWNTTVLRFTAPLALTTSTCRIAXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120
           XXXXXXXXXXXXXXXXXXXLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT
Sbjct: 61  XXXXXXXXXXXXXXXXXXXLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120

Query: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 172
           CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP
Sbjct: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 171

[Close]

BLAST of CsGy3G017920 vs. TrEMBL
Match: tr|A0A2N9J073|A0A2N9J073_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57711 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 4.8e-45
Identity = 86/92 (93.48%), Postives = 89/92 (96.74%), Query Frame = 0


Query: 80  LSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRP 139
           LSNIPQTLSGECA P DCKKARIQRPKSRKAESCTIKCV TCIRGG+GSPGEGPLN+RRP
Sbjct: 702 LSNIPQTLSGECALPKDCKKARIQRPKSRKAESCTIKCVTTCIRGGEGSPGEGPLNVRRP 761

Query: 140 IVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 172
           +VVFKQGFRSRQYCLVECSDICNLIGDGDDGP
Sbjct: 762 LVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 793

[Close]

BLAST of CsGy3G017920 vs. TrEMBL
Match: tr|A0A2I4G305|A0A2I4G305_9ROSI (uncharacterized protein LOC109004254 OS=Juglans regia OX=51240 GN=LOC109004254 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 6.2e-45
Identity = 85/92 (92.39%), Postives = 89/92 (96.74%), Query Frame = 0


Query: 80  LSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRP 139
           LSNIPQTLSGECA P DCK+ARIQRPKSRKAESCTIKCV TCIRGG+GSPGEGPLN+RRP
Sbjct: 88  LSNIPQTLSGECASPKDCKRARIQRPKSRKAESCTIKCVTTCIRGGEGSPGEGPLNVRRP 147

Query: 140 IVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 172
           +VVFKQGFRSRQYCLVECSDICNLIGDGDDGP
Sbjct: 148 LVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 179

[Close]

BLAST of CsGy3G017920 vs. TrEMBL
Match: tr|A0A2P4KB62|A0A2P4KB62_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_75698 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.4e-44
Identity = 85/92 (92.39%), Postives = 88/92 (95.65%), Query Frame = 0


Query: 80  LSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRP 139
           LSNIPQTLSGECA P DCKKARIQRPKSRKAESCTIKCV TCIRGG+GSPGEGP N+RRP
Sbjct: 92  LSNIPQTLSGECALPKDCKKARIQRPKSRKAESCTIKCVTTCIRGGEGSPGEGPFNVRRP 151

Query: 140 IVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 172
           +VVFKQGFRSRQYCLVECSDICNLIGDGDDGP
Sbjct: 152 LVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 183

The following BLAST results are available for this feature:

BLAST of CsGy3G017920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140725.1	4.2e-69	100.00	PREDICTED: uncharacterized protein LOC101203967 [Cucumis sativus] >KGN57482.1 hy...	[more]
XP_008456185.1	1.8e-67	97.66	PREDICTED: uncharacterized protein LOC103496200 [Cucumis melo]	[more]
XP_022934222.1	3.6e-60	91.23	uncharacterized protein LOC111441457 isoform X2 [Cucurbita moschata]	[more]
XP_022983921.1	3.6e-60	91.81	uncharacterized protein LOC111482398 isoform X2 [Cucurbita maxima]	[more]
XP_023526623.1	3.6e-60	91.23	uncharacterized protein LOC111790064 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy3G017920 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G78995.1	3.0e-37	78.26	unknown protein	[more]

BLAST of CsGy3G017920 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy3G017920 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LA46\|A0A0A0LA46_CUCSA	2.8e-69	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G198460 PE=4 SV=1	[more]
tr\|A0A1S3C289\|A0A1S3C289_CUCME	1.2e-67	97.66	uncharacterized protein LOC103496200 OS=Cucumis melo OX=3656 GN=LOC103496200 PE=...	[more]
tr\|A0A2N9J073\|A0A2N9J073_FAGSY	4.8e-45	93.48	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57711 PE=4 SV=1	[more]
tr\|A0A2I4G305\|A0A2I4G305_9ROSI	6.2e-45	92.39	uncharacterized protein LOC109004254 OS=Juglans regia OX=51240 GN=LOC109004254 P...	[more]
tr\|A0A2P4KB62\|A0A2P4KB62_QUESU	1.4e-44	92.39	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_75698 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G017920.1	CsGy3G017920.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..83
None	No IPR available	PANTHER	PTHR36006	FAMILY NOT NAMED	coord: 36..171
None	No IPR available	PANTHER	PTHR36006:SF2	SUBFAMILY NOT NAMED	coord: 36..171

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G017920	Cla013114	Watermelon (97103) v1	cgybwmB229
CsGy3G017920	Csa3G198460	Cucumber (Chinese Long) v2	cgybcuB109
CsGy3G017920	MELO3C019561	Melon (DHL92) v3.5.1	cgybmeB210
CsGy3G017920	ClCG05G010440	Watermelon (Charleston Gray)	cgybwcgB214
CsGy3G017920	CSPI03G17980	Wild cucumber (PI 183967)	cgybcpiB110
CsGy3G017920	CmaCh14G008830	Cucurbita maxima (Rimu)	cgybcmaB312
CsGy3G017920	CmoCh14G009010	Cucurbita moschata (Rifu)	cgybcmoB285
CsGy3G017920	Lsi05G002560	Bottle gourd (USVL1VR-Ls)	cgyblsiB198
CsGy3G017920	Cp4.1LG03g05450	Cucurbita pepo (Zucchini)	cgybcpeB401
CsGy3G017920	MELO3C019561.2	Melon (DHL92) v3.6.1	cgybmedB215
CsGy3G017920	CsaV3_3G018050	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G017920	Cla97C05G092820	Watermelon (97103) v2	cgybwmbB206
CsGy3G017920	Bhi01G001298	Wax gourd	cgybwgoB271
CsGy3G017920	Carg24253	Silver-seed gourd	carcgybB0190

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G017920	Cucurbita maxima (Rimu)	cgybcmaB371
CsGy3G017920	Cucurbita maxima (Rimu)	cgybcmaB379
CsGy3G017920	Cucurbita moschata (Rifu)	cgybcmoB342
CsGy3G017920	Cucurbita moschata (Rifu)	cgybcmoB352
CsGy3G017920	Cucurbita pepo (Zucchini)	cgybcpeB383
CsGy3G017920	Cucumber (Chinese Long) v2	cgybcuB151
CsGy3G017920	Bottle gourd (USVL1VR-Ls)	cgyblsiB173
CsGy3G017920	Melon (DHL92) v3.5.1	cgybmeB160
CsGy3G017920	Watermelon (Charleston Gray)	cgybwcgB197
CsGy3G017920	Watermelon (97103) v1	cgybwmB253
CsGy3G017920	Wild cucumber (PI 183967)	cgybcpiB153
CsGy3G017920	Silver-seed gourd	carcgybB0758