CSPI03G17980 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G17980
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Mitochondrial import inner membrane translocase subunit tim-10 isoform 2
Location	Chr3 : 13642607 .. 13643699 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACATTTTTGACACGTGGATCAACACCAATCTTGGAAAAAATAGAGTTTAAAAAATCAAAACGTACATTATCCAAAAGAAAGAGGAAGAAGAAGAGGAGGAGGAAGAAAGGAAGGAAGAAAGAAGATGTTAGGATTCTCGAAAGCAGAGTCAAAATCAAAATCCTAAAACTCCAGAATGCTAACCCATGTAAAAGGTCCACTTCCCCCAACTCCACCAACCCTACCACATCCTAATTGGAACACCACCGTCCTCCGATTCACCGCTCCCCTCGCCCTTACCACATCCACTTGCCGTATAGCAACCACTGCGGCAGCGATTCTCGCAGCTGCAGCCGTGATTGCTTCGCCTCCCCCGTCTGCCGCCACCGAGACCAGCGCTACCTTATCAGAACAACAAGAAGAAAGTAGTACGCTGTCGAACATTCCGCAGACTCTTTCCGGCGAGTGCGCGCAGCCGAGCGACTGCAAGAAGGCGAGAATTCAACGGCCGAAGTCGAGGAAGGCGGAATCTTGCACGATAAAGTGCGTGGGAACTTGCATTAGAGGCGGCGATGGATCTCCCGGAGAAGGGCCTCTGAACATCAGGAGGTAATAATTAGTAGAAATTGTTGAGAATTAAGTGGAATTGTTAGTGATTGATGTGGAAAATTTTGTTGGTTTTGTAGACCAATTGTTGTTTTCAAGCAAGGGTTTCGAAGTCGTCAATACTGGTGCGTATGCGTCTCTTTAAATCTTCCAAGTTTGTTTTCTTTGATCTTATTTGATTTGAATGGTGATCCTTAATGATTGGTTGAGTTTTGGGGATGTTGCAGTTTGGTGGAATGTTCAGATATATGCAATTTGATCGGAGATGGTGATGATGGACCTTAACAACATTTTTCTCTTTCTTTTTTCTATATTTCTCCTCACATTTCTTTTTTCTCTTTCCTTTATTTCATTCATGAAATAAATTTTATGTCATTCTTTTTCCCCTAAAAACAATTCCTTCCAAATGCTGGATTACTTTAATTACAATATAATATTTTAATACTAATTCAAGCATTACAATCACTAATATTCATATCTCACTGCAACTACTTTACTTTTTAGGGAC

mRNA sequence

ATGCTAACCCATGTAAAAGGTCCACTTCCCCCAACTCCACCAACCCTACCACATCCTAATTGGAACACCACCGTCCTCCGATTCACCGCTCCCCTCGCCCTTACCACATCCACTTGCCGTATAGCAACCACTGCGGCAGCGATTCTCGCAGCTGCAGCCGTGATTGCTTCGCCTCCCCCGTCTGCCGCCACCGAGACCAGCGCTACCTTATCAGAACAACAAGAAGAAAGTAGTACGCTGTCGAACATTCCGCAGACTCTTTCCGGCGAGTGCGCGCAGCCGAGCGACTGCAAGAAGGCGAGAATTCAACGGCCGAAGTCGAGGAAGGCGGAATCTTGCACGATAAAGTGCGTGGGAACTTGCATTAGAGGCGGCGATGGATCTCCCGGAGAAGGGCCTCTGAACATCAGGAGGTAA

Coding sequence (CDS)

ATGCTAACCCATGTAAAAGGTCCACTTCCCCCAACTCCACCAACCCTACCACATCCTAATTGGAACACCACCGTCCTCCGATTCACCGCTCCCCTCGCCCTTACCACATCCACTTGCCGTATAGCAACCACTGCGGCAGCGATTCTCGCAGCTGCAGCCGTGATTGCTTCGCCTCCCCCGTCTGCCGCCACCGAGACCAGCGCTACCTTATCAGAACAACAAGAAGAAAGTAGTACGCTGTCGAACATTCCGCAGACTCTTTCCGGCGAGTGCGCGCAGCCGAGCGACTGCAAGAAGGCGAGAATTCAACGGCCGAAGTCGAGGAAGGCGGAATCTTGCACGATAAAGTGCGTGGGAACTTGCATTAGAGGCGGCGATGGATCTCCCGGAGAAGGGCCTCTGAACATCAGGAGGTAA

Homology

[Close]

BLAST of CSPI03G17980 vs. TrEMBL
Match: A0A0A0LA46_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G198460 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 1.3e-89
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 1


Query: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASPPP 60
           MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASPPP
Sbjct: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASPPP 60

Query: 61  SAATETSATLSEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120
           SAATETSATLSEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT
Sbjct: 61  SAATETSATLSEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120

Query: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 172
           CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP
Sbjct: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 171

[Close]

BLAST of CSPI03G17980 vs. TrEMBL
Match: M5X7W8_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022787mg PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 6.8e-46
Identity = 100/124 (80.65%), Postives = 105/124 (84.68%), Query Frame = 1


Query: 48  ILAAAAVIASPPPSAATETSATLSEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKS 107
           +LAAAAVI S   SAA E+        E S TLSNIPQTLSGECA P+DCKKARIQRPKS
Sbjct: 1   LLAAAAVITSA--SAAMESP-------ENSETLSNIPQTLSGECALPTDCKKARIQRPKS 60

Query: 108 RKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDG 167
           RKAESCTIKCV TCIRGGDGSPGEGP N+RRP+VVFKQGFRSRQYCLVECSDICNLI DG
Sbjct: 61  RKAESCTIKCVTTCIRGGDGSPGEGPFNVRRPLVVFKQGFRSRQYCLVECSDICNLIKDG 115

Query: 168 DDGP 172
           DDGP
Sbjct: 121 DDGP 115

[Close]

BLAST of CSPI03G17980 vs. TrEMBL
Match: U5GB13_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s15070g PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.6e-45
Identity = 100/141 (70.92%), Postives = 111/141 (78.72%), Query Frame = 1


Query: 34  LTTSTCRIATTAAAILAAAAVIASPPPSAATETSATLSEQQEESSTLSNIPQTLSG-ECA 93
           +T  + R + T  ++ AA AV+AS    A+ E      +QQ E+ TLSNIPQTLSG ECA
Sbjct: 38  ITRGSSRFSMTITSLFAAGAVLASAAAGASIEAPQQQQQQQAETETLSNIPQTLSGGECA 97

Query: 94  Q--PSDCKKARIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSR 153
              P DCKKARIQRPKSRKAESCTIKCV TCIRGG+GSPGEGPLN+RRPIVVFKQGFRSR
Sbjct: 98  SVSPKDCKKARIQRPKSRKAESCTIKCVTTCIRGGEGSPGEGPLNVRRPIVVFKQGFRSR 157

Query: 154 QYCLVECSDICNLIGDGDDGP 172
            YCLVECSDICNLIGD DDGP
Sbjct: 158 NYCLVECSDICNLIGDADDGP 178

[Close]

BLAST of CSPI03G17980 vs. TrEMBL
Match: V4SMX7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029418mg PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 4.4e-45
Identity = 97/133 (72.93%), Postives = 112/133 (84.21%), Query Frame = 1


Query: 39  CRIATTAAAILAAAAVIASPPPSAATETSATLSEQQEESSTLSNIPQTLSGECAQPSDCK 98
           C IAT+A+ + AAA VIA+    AA++   T    Q+++ TLSNIPQ LSG+CA  +DC+
Sbjct: 40  CSIATSASGLFAAAVVIAA----AASDGIGT---PQDQAETLSNIPQELSGDCASGNDCR 99

Query: 99  KARIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECS 158
           K RIQRPKSRKAESCTIKCV TCIRGGDGSPGEGPLN+RRPIVVFK+GFRSR+YCLVECS
Sbjct: 100 KPRIQRPKSRKAESCTIKCVTTCIRGGDGSPGEGPLNVRRPIVVFKEGFRSRRYCLVECS 159

Query: 159 DICNLIGDGDDGP 172
           DICNLIGDGDDGP
Sbjct: 160 DICNLIGDGDDGP 165

[Close]

BLAST of CSPI03G17980 vs. TrEMBL
Match: F6GYH5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0054g01760 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 7.6e-45
Identity = 88/97 (90.72%), Postives = 89/97 (91.75%), Query Frame = 1


Query: 75  EESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPL 134
           E   TLSNIPQTLSGEC    DCKKARIQRPKSRKAESCTIKCV TCIRGGDGSPGEGPL
Sbjct: 15  EAPETLSNIPQTLSGECPSVQDCKKARIQRPKSRKAESCTIKCVTTCIRGGDGSPGEGPL 74

Query: 135 NIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 172
           NIRRP+VVFKQGFRSRQYCLVECSDICNLIGDGDDGP
Sbjct: 75  NIRRPLVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 111

[Close]

BLAST of CSPI03G17980 vs. TAIR10
Match: AT1G78995.1 (AT1G78995.1 unknown protein)

HSP 1 Score: 156.0 bits (393), Expect = 2.1e-38
Identity = 88/146 (60.27%), Postives = 99/146 (67.81%), Query Frame = 1


Query: 29  TAPLALTTSTCRIATTAAAILAAAAVIAS---PPPSAATETSATLSEQQEESSTLSNIPQ 88
           T   A+  ST  I   AAA++ AA  +AS   PPP              ++  TLSN+PQ
Sbjct: 35  TRSAAVRISTATIGAIAAAVMMAAVSVASAELPPPP-------------QDGETLSNVPQ 94

Query: 89  TLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQ 148
           TLSGE     DCKK RIQRPKS+ AE CT+KCV TCIR GDG   EGP+NIRRP+VVFKQ
Sbjct: 95  TLSGE-----DCKKQRIQRPKSKNAEKCTVKCVNTCIRSGDG---EGPINIRRPLVVFKQ 154

Query: 149 GFRSRQYCLVECSDICNLIGDGDDGP 172
           GFRSR YCLVECSDICNLIGDGD GP
Sbjct: 155 GFRSRNYCLVECSDICNLIGDGDYGP 159

[Close]

BLAST of CSPI03G17980 vs. NCBI nr
Match: gi|449445931|ref|XP_004140725.1| (PREDICTED: uncharacterized protein LOC101203967 [Cucumis sativus])

HSP 1 Score: 337.0 bits (863), Expect = 1.9e-89
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 1


Query: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASPPP 60
           MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASPPP
Sbjct: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASPPP 60

Query: 61  SAATETSATLSEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120
           SAATETSATLSEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT
Sbjct: 61  SAATETSATLSEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120

Query: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 172
           CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP
Sbjct: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 171

[Close]

BLAST of CSPI03G17980 vs. NCBI nr
Match: gi|659112369|ref|XP_008456185.1| (PREDICTED: uncharacterized protein LOC103496200 [Cucumis melo])

HSP 1 Score: 326.6 bits (836), Expect = 2.6e-86
Identity = 166/171 (97.08%), Postives = 168/171 (98.25%), Query Frame = 1


Query: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASPPP 60
           ML+HVKGP PP PPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASP P
Sbjct: 1   MLSHVKGPFPPIPPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASPLP 60

Query: 61  SAATETSATLSEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120
           SAATETSAT+SEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT
Sbjct: 61  SAATETSATVSEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120

Query: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 172
           CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP
Sbjct: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 171

[Close]

BLAST of CSPI03G17980 vs. NCBI nr
Match: gi|645280166|ref|XP_008245063.1| (PREDICTED: uncharacterized protein LOC103343169 [Prunus mume])

HSP 1 Score: 196.4 bits (498), Expect = 4.0e-47
Identity = 103/131 (78.63%), Postives = 108/131 (82.44%), Query Frame = 1


Query: 41  IATTAAAILAAAAVIASPPPSAATETSATLSEQQEESSTLSNIPQTLSGECAQPSDCKKA 100
           I    A +LAAAAVIAS   SAA E+        E S TLSNIPQTLSGECA P+DCKKA
Sbjct: 67  ILLATAGLLAAAAVIASASASAAMESP-------ENSETLSNIPQTLSGECALPTDCKKA 126

Query: 101 RIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDI 160
           RIQRPKSRKAESCTIKCV TCIRGGDGSPGEGP N+RRP+VVFKQGFRSRQYCLVECSDI
Sbjct: 127 RIQRPKSRKAESCTIKCVTTCIRGGDGSPGEGPFNVRRPLVVFKQGFRSRQYCLVECSDI 186

Query: 161 CNLIGDGDDGP 172
           CNLI DGDDGP
Sbjct: 187 CNLIKDGDDGP 190

[Close]

BLAST of CSPI03G17980 vs. NCBI nr
Match: gi|595951728|ref|XP_007216414.1| (hypothetical protein PRUPE_ppa022787mg, partial [Prunus persica])

HSP 1 Score: 191.8 bits (486), Expect = 9.8e-46
Identity = 100/124 (80.65%), Postives = 105/124 (84.68%), Query Frame = 1


Query: 48  ILAAAAVIASPPPSAATETSATLSEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKS 107
           +LAAAAVI S   SAA E+        E S TLSNIPQTLSGECA P+DCKKARIQRPKS
Sbjct: 1   LLAAAAVITSA--SAAMESP-------ENSETLSNIPQTLSGECALPTDCKKARIQRPKS 60

Query: 108 RKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDG 167
           RKAESCTIKCV TCIRGGDGSPGEGP N+RRP+VVFKQGFRSRQYCLVECSDICNLI DG
Sbjct: 61  RKAESCTIKCVTTCIRGGDGSPGEGPFNVRRPLVVFKQGFRSRQYCLVECSDICNLIKDG 115

Query: 168 DDGP 172
           DDGP
Sbjct: 121 DDGP 115

[Close]

BLAST of CSPI03G17980 vs. NCBI nr
Match: gi|568870880|ref|XP_006488623.1| (PREDICTED: uncharacterized protein LOC102623973 [Citrus sinensis])

HSP 1 Score: 189.9 bits (481), Expect = 3.7e-45
Identity = 97/133 (72.93%), Postives = 113/133 (84.96%), Query Frame = 1


Query: 39  CRIATTAAAILAAAAVIASPPPSAATETSATLSEQQEESSTLSNIPQTLSGECAQPSDCK 98
           C IAT+A+ ++AAA VIA+    AA++   T    Q+++ TLSNIPQ LSG+CA  +DC+
Sbjct: 40  CSIATSASGLIAAAVVIAA----AASDGIGT---PQDQAETLSNIPQELSGDCASGNDCR 99

Query: 99  KARIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECS 158
           K RIQRPKSRKAESCTIKCV TCIRGGDGSPGEGPLN+RRPIVVFK+GFRSR+YCLVECS
Sbjct: 100 KPRIQRPKSRKAESCTIKCVTTCIRGGDGSPGEGPLNVRRPIVVFKEGFRSRRYCLVECS 159

Query: 159 DICNLIGDGDDGP 172
           DICNLIGDGDDGP
Sbjct: 160 DICNLIGDGDDGP 165

The following BLAST results are available for this feature:

BLAST of CSPI03G17980 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI03G17980 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LA46_CUCSA	1.3e-89	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G198460 PE=4 SV=1	[more]
M5X7W8_PRUPE	6.8e-46	80.65	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022787mg PE=4 S...	[more]
U5GB13_POPTR	2.6e-45	70.92	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s15070g PE=4 SV=1	[more]
V4SMX7_9ROSI	4.4e-45	72.93	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029418mg PE=4 SV=1	[more]
F6GYH5_VITVI	7.6e-45	90.72	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0054g01760 PE=4 SV=...	[more]

BLAST of CSPI03G17980 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G78995.1	2.1e-38	60.27	unknown protein	[more]

BLAST of CSPI03G17980 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445931\|ref\|XP_004140725.1\|	1.9e-89	100.00	PREDICTED: uncharacterized protein LOC101203967 [Cucumis sativus]	[more]
gi\|659112369\|ref\|XP_008456185.1\|	2.6e-86	97.08	PREDICTED: uncharacterized protein LOC103496200 [Cucumis melo]	[more]
gi\|645280166\|ref\|XP_008245063.1\|	4.0e-47	78.63	PREDICTED: uncharacterized protein LOC103343169 [Prunus mume]	[more]
gi\|595951728\|ref\|XP_007216414.1\|	9.8e-46	80.65	hypothetical protein PRUPE_ppa022787mg, partial [Prunus persica]	[more]
gi\|568870880\|ref\|XP_006488623.1\|	3.7e-45	72.93	PREDICTED: uncharacterized protein LOC102623973 [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030154	cell differentiation
biological_process	GO:0015706	nitrate transport
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0009863	salicylic acid mediated signaling pathway
biological_process	GO:0010363	regulation of plant-type hypersensitive response
biological_process	GO:0006612	protein targeting to membrane
biological_process	GO:0009860	pollen tube growth
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:2001143	N-methylnicotinate transport
biological_process	GO:0009827	plant-type cell wall modification
biological_process	GO:2001142	nicotinate transport
biological_process	GO:0009867	jasmonic acid mediated signaling pathway
biological_process	GO:0009693	ethylene biosynthetic process
biological_process	GO:0030968	endoplasmic reticulum unfolded protein response
biological_process	GO:0006865	amino acid transport
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0090416	nicotinate transporter activity
molecular_function	GO:0090417	N-methylnicotinate transporter activity
molecular_function	GO:0022857	transmembrane transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G17980.2	CSPI03G17980.2	mRNA
CSPI03G17980.1	CSPI03G17980.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36006	FAMILY NOT NAMED	coord: 40..138 score: 2.3
None	No IPR available	PANTHER	PTHR36006:SF2	SUBFAMILY NOT NAMED	coord: 40..138 score: 2.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI03G17980	Cla013114	Watermelon (97103) v1	cpiwmB242
CSPI03G17980	Csa3G198460	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G17980	MELO3C019561	Melon (DHL92) v3.5.1	cpimeB241
CSPI03G17980	ClCG05G010440	Watermelon (Charleston Gray)	cpiwcgB237
CSPI03G17980	Lsi05G002560	Bottle gourd (USVL1VR-Ls)	cpilsiB209
CSPI03G17980	MELO3C019561.2	Melon (DHL92) v3.6.1	cpimedB239
CSPI03G17980	CsaV3_3G018050	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G17980	Cla97C05G092820	Watermelon (97103) v2	cpiwmbB221
CSPI03G17980	Bhi01G001298	Wax gourd	cpiwgoB283
CSPI03G17980	Cucsa.108770	Cucumber (Gy14) v1	cgycpiB133
CSPI03G17980	CmaCh14G008830	Cucurbita maxima (Rimu)	cmacpiB247
CSPI03G17980	CmoCh14G009010	Cucurbita moschata (Rifu)	cmocpiB235
CSPI03G17980	Cp4.1LG03g05450	Cucurbita pepo (Zucchini)	cpecpiB605
CSPI03G17980	CsGy3G017920	Cucumber (Gy14) v2	cgybcpiB110
CSPI03G17980	Carg24253	Silver-seed gourd	carcpiB0203

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G17980	Silver-seed gourd	carcpiB0799
CSPI03G17980	Cucurbita maxima (Rimu)	cmacpiB461
CSPI03G17980	Cucurbita moschata (Rifu)	cmocpiB449
CSPI03G17980	Cucurbita pepo (Zucchini)	cpecpiB551