CsaV3_3G018050 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G018050
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Mitochondrial import inner membrane translocase subunit tim-10 isoform 1
Location	chr3 : 13780091 .. 13785151 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CATAGGACATCCACATATTTGGAGGTTCTAACTTGAAATATGAGAAAACATAGTAGGAGGCGGTTGGAGAAATGGGGAAATGATTGATAGAAGTGAGTTTGGGCCGCAGAGGATTGTTGATGAGAAGTGAAGGATTTCGTCCTTTAAATAGGTTCAAGATTGGTTGTAAATGACTGAAACCCATGCTCTAAATAGTCCTTACAAAATTAGGGGTTAATGGAATTGAATAGTGATGAATATAATTGAATTGAAGGGTGGAAGAATAGTGATGCAAGTATAGTTTCCAATTTGGAGGGTAAAGCAAAATTTAATATGAAAAAACTTAAGACATAATTCATATGGACATTTTTGACACGTGGATCAACACCAATCTTGGAAAAAATAGAGTTTAAAAAATCAAAACGTACATTATCCAAAAGAAAGAGGAAGAAGAAGAGGAGGAGGAAGAAAGGAAGGAAGAAAGAAGATGTTAGGATTCTCGAAAGCAGAGTCAAAATCAAAATCCTAAAACTCCAGAATGCTAACCCATGTAAAAGGTCCACTTCCCCCAACTCCACCAACCCTACCACATCCTAATTGGAACACCACCGTCCTCCGATTCACCGCTCCCCTCGCCCTTACCACATCCACTTGCCGTATAGCAACCACTGCGGCAGCGATTCTCGCAGCTGCAGCCGTGATTGCTTCGCCTCCCCCGTCTGCCGCCACCGAGACCAGCGCTACCTTATCAGAACAACAAGAAGAAAGTAGTACGCTGTCGAACATTCCGCAGACTCTTTCCGGCGAGTGCGCGCAGCCGAGCGACTGCAAGAAGGCGAGAATTCAACGGCCGAAGTCGAGGAAGGCGGAATCTTGCACGATAAAGTGCGTGGGAACTTGCATTAGAGGCGGCGATGGATCTCCCGGAGAAGGGCCTCTGAACATCAGGAGGTAATAATTAGTAGAAATTGTTGAGAATTAAGTGGAATTGTTAGTGATTGATGTGGAAAATTTTGTTGGTTTTGTAGACCAATTGTTGTTTTCAAGCAAGGGTTTCGAAGTCGTCAATACTGGTGCGTATGCGTCTCTTTAAATCTTCCAAGTTTGTTTTCTTTGATCTTATTTGATTTGAATGGTGATCCTTAATGATTGGTTGAGTTTTGGGGATGTTGCAGTTTGGTGGAATGTTCAGATATATGCAATTTGATCGGAGATGGTGATGATGGACCTTAACAACATTTTTCTCTTTCTTTTTTCTATATTTCTCCTCACATTTCTTTTTTCTCTTTCCTTTATTTCATTCATGAAATAAATTTTATGTCATTCTTTTTCCCCTAAAAACAATTCCTTCCAAATGCTGGATTACTTTAATTACAATATAATATTTTAATACTAATTCAAGCATTACAATCACTAATATTCATATCTCACTGCAACTACTTTACTTTTTAGGGACTCATACCAATTAAATTGTAATCTATTACATTATTATCATTACTTTATAACTACTCAGATTTATAATTATTTTTTGTTATTACTTTTATAATATTTTGTAAATTTACTACCACTTACAAATTCTCACAATTCCATCAAATATGGACGATAATCTCCACATATTCCACTATTCTGCACAATTTTGGAAAAAGAAAAGAAAACCACTTCCACTAATTTCACTAACTTTACACTATTAAAGTGTCAAGAAAACTTTTAATTTCTAGATAGATAGTCACTTTCTTAAACTCATCACCTCTTTAGTTATAGAATCTTACTACATCAAATGAAAACAAACCATTATTATTGAAATTTAGATTTTGAATATACTATTATCAATCTAAATATAAAATCAAAATGATAATATTGTCCCTTCATATTTGGATTGAACATTTTTTTTCTTTTGATCTCCTACTTAGTAATTGTGAAATTCTAATAAGCGTGTGGATTTTAATTCTCAATTCCAATTGCATCTGTATATTTTGTGATGGAAAACGTAGATTTTAATGTCTTCAACTAAAGGTCACCCATGAAATTCTATATATAAAGAACATGAGATAAGAAAAAAAAAACAAAAAAAGCTGAACAAAAGAACAAATATATCTTTAAGTTGTTCACTCAGGACAGCATAAGGTAAAAACTTATTGTATTGTATAAATATGCACAACAATCACCTACAATATGAAAATGAAACTAACTCCTTTCCCCTTGGATGCAATATACAAAACTTGAGAGAATTGATGGAAAAAGGAACAACTTCCACCTACCTAACAATTTTTCCAAAAAAAAACAAAGGAGAAAAAATATACACCCATATTGTGCAACCGAAGGCAGAGAACCAGAGTTGAAGACTTAGTGATTTATTTATACAAATGGATGAAGATATCATTGCAATGAAGATTTCTCAGGCAAAAATAAGTATCGAAAGCGAGAATCGAAGGGAAGAATACCGCAGTTGCGAGAACCGATTAGGCTTTGCCGCCTCTGGGATATACAACCCTGAACAAATGCAGCTTGATGGGGTGGAAGGTAATGGGAAATCCATACTGCCAAATTCACGTCGTCAACAGAGTTTTTGGCGAAACAATATAGCAGTTTCGGTACCAATAATCTTCCTTTGCTGCTAATACCTACAGCAGCTCGAATGAAGTCGCGTTGTGCCTCTAGGAGATCCTCTCGAATGTTGTCTGCAGTGTAGATCCTCACCTGCATAAGTTATACAAGTTAGACTTGAAGTAGAAAAATGTTGATACATCGGTCCACTATCTTACACGAGTTTGTTAGACAAGAACTACCGCAGGAGAAGAGTAAGTTCCGCAGCTCAGAGCAAATGTTAAAAGTGGTTCGTGTTTGTCTATCGCAAATCTTCGCTGTTCCTCCGTCACCTTCGATTTGTGGAGAGCAAGAAGCAAAGCCTGGTTACAAGTTTCCACAATATAGGGCAATGAGCCAATGAACTGTCAAGAGAATAAGCAAGAAAACCTAAAAACAAAACAGTTATAGCAAGTGCATACAATTTGTGGTCTGTGAACTGGTGGTTTCATCTTGAGGATGACATATTCAATTCCTGTTGCACTGAAAGAATGCCCACCAACAGTGTATGCTGCCTGCAAGAGTACATTCCCGAAAAAAGTAATCATTAATACCCAAAAAGGAAGGAACCTGACAACAAAAACAAGCTGCAAGTTTCAAAATACACAGCCTAGAACTGATTTTTTTTTACCAGAATTTTCATATGAACTGTACTATTTTTAATTCCTGTAGGACATTATTCAGTTTCTCATTTCTGATTCCTGTAAGGATAAATTCAAGAGTGGCATTGTCAGCTCCGATCATTATCCTATGTACTTCACTCATTGGAGTGCAAAAATGGGGTCTCGGATACTTCAAATTTGAGAACACGTGGATGGAACATCACTCCTCTGATTTACTAAAAAAATTGGTGGCATTGAAATTAGACACCAGGATAATTTCTGCTCCCAGTTGGTGTTTCCCATGTCCAAATGTGGTGAATCCCTTATGCACATTACTGTGTTTTGTGACTATACCCAATCATGTCGGATGAGAATCTTTTCCTGCTTCAACTATCTAGTGGTTTTCCCTAATGACCCTCTCACCCTTTTGAATATGCTTCTTATTGGACATCCGTTAAAGAATGAGAAAGCTATTAGTAAAGCTTCATCATTAAAGTTTACTTTTGGATCATATGGAATGAGTCAAATCATATGATCCAAAACATCGTATATTTGAAGATAAGCCCTTCTGTAATTTCATATAATCAATGAAATTTTGATTGTTTCTAGTAATAAATAAATATATTAACCGTACTATTTCTCAAAGTAAAGCTGGTGCATTGCTTTCATAGAGATATCAAGAATGATATAAGAGCACAAAGACTTTGAATGCACGTCCTAGTTAGTAGTTTCTACTTTTTTACAATCAGAAGGGGTCTAACTCTTGGTATTGTGCTCATGAGCCACCTCGCTAATCCAGAGAGAGGCTTTGCGGACTTCAAAAACTAACTTCGGGAGACAACAAAGAGTTAAGTTATTAAATCTCTACCCAGACACTTGAACTTGGGACCTTGGAAGGTATCTAAAAGCATCTCAAGTTTTATCAATTCTACCCTTGGGGTTAAAACATAATACTCGTCTTTTTCAATAGTGAGAAAACAATTCATTGGATTTTCAAAATAATAAAGGCTCTTCAAGTTGGGCTTGCTCTAGTGTGCACATTTAGAAGTAAGATATTGTTAAGGCAAACAATAAATTAAGAACATTGTGAACGGGAACTACTAACTAGCAAAGGGATACATGGTAGATGTATTTCCTGAAAGTTGTGAACCTTGATACAAAGTAACTGCATATCTACTTTCATGAGTAGTCTTTTAAAATTGAAGCTTTTTCATCGACACTTGAACCTCTTCTCGGATGACAGCTTGTAGAGGAAAATAACTACAGGGTAAACCTGGAAACGAACTATTTACATATTTTTCAAATTCCAAGTCCAAAATGCGTTTAGTTCCGCAGACTAAGGCAACTTGTATGGACTAAAAAGAATATCAAACTAAAAGAACCGACCAGACATGAAATACGTCCAACTCAAATCAGATCAGTGCCATTAACAAACTCACCGTACCACATGATATCAAAGCTAGTCCGTTTGCTTAACTAACCAGCTCTTTCTCTCTCTGCTTGGGCATATCCTCCCACAGCTTACTATTATCATGCTCCCACAGCACATTCCCCCCCCCCCCCCCCCCCCCAACCCAGCAAATTGACGATATAGTTCACATCAAGCAGCCAAACACGTTAGTGTGAGTCCGTGTTGCTGTTGCATTGCCAAGCAAGTACGTAAGCAGTGATGTGATGCTCCTTACATGGTTACCTAACCATGCTTCAACTGATATTCATGAAACCATCATCATGCACAAATTAGCATAGCATAGGATGAAAACCCATGTCTATACTGAAAACTAGCAAATACAAAAGAATATCCAGGCACTAAAATGTGAATTAACATAAAAAGGGAAAAAGAAGAGAACAAAATATGGCCTTCAAAATCAAACCTTTTGCATCAAAGAGAAGAGTT

mRNA sequence

ATGCTAACCCATGTAAAAGGTCCACTTCCCCCAACTCCACCAACCCTACCACATCCTAATTGGAACACCACCGTCCTCCGATTCACCGCTCCCCTCGCCCTTACCACATCCACTTGCCGTATAGCAACCACTGCGGCAGCGATTCTCGCAGCTGCAGCCGTGATTGCTTCGCCTCCCCCGTCTGCCGCCACCGAGACCAGCGCTACCTTATCAGAACAACAAGAAGAAAGTAGTACGCTGTCGAACATTCCGCAGACTCTTTCCGGCGAGTGCGCGCAGCCGAGCGACTGCAAGAAGGCGAGAATTCAACGGCCGAAGTCGAGGAAGGCGGAATCTTGCACGATAAAGTGCGTGGGAACTTGCATTAGAGGCGGCGATGGATCTCCCGGAGAAGGGCCTCTGAACATCAGGAGACCAATTGTTGTTTTCAAGCAAGGGTTTCGAAGTCGTCAATACTGTTTGGTGGAATGTTCAGATATATGCAATTTGATCGGAGATGGTGATGATGGACCTTAA

Coding sequence (CDS)

ATGCTAACCCATGTAAAAGGTCCACTTCCCCCAACTCCACCAACCCTACCACATCCTAATTGGAACACCACCGTCCTCCGATTCACCGCTCCCCTCGCCCTTACCACATCCACTTGCCGTATAGCAACCACTGCGGCAGCGATTCTCGCAGCTGCAGCCGTGATTGCTTCGCCTCCCCCGTCTGCCGCCACCGAGACCAGCGCTACCTTATCAGAACAACAAGAAGAAAGTAGTACGCTGTCGAACATTCCGCAGACTCTTTCCGGCGAGTGCGCGCAGCCGAGCGACTGCAAGAAGGCGAGAATTCAACGGCCGAAGTCGAGGAAGGCGGAATCTTGCACGATAAAGTGCGTGGGAACTTGCATTAGAGGCGGCGATGGATCTCCCGGAGAAGGGCCTCTGAACATCAGGAGACCAATTGTTGTTTTCAAGCAAGGGTTTCGAAGTCGTCAATACTGTTTGGTGGAATGTTCAGATATATGCAATTTGATCGGAGATGGTGATGATGGACCTTAA

Protein sequence

MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIATTAAAILAAAAVIASPPPSAATETSATLSEQQEESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP

Homology

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BLAST of CsaV3_3G018050 vs. NCBI nr
Match: XP_004140725.1 (PREDICTED: uncharacterized protein LOC101203967 [Cucumis sativus] >KGN57482.1 hypothetical protein Csa_3G198460 [Cucumis sativus])

HSP 1 Score: 270.8 bits (691), Expect = 3.2e-69
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIXXXXXXXXXXXXXXXXXXX 60
           MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120
           XXXXXXXXXXXXXXXXXXXLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT
Sbjct: 61  XXXXXXXXXXXXXXXXXXXLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120

Query: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 172
           CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP
Sbjct: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 171

[Close]

BLAST of CsaV3_3G018050 vs. NCBI nr
Match: XP_008456185.1 (PREDICTED: uncharacterized protein LOC103496200 [Cucumis melo])

HSP 1 Score: 265.4 bits (677), Expect = 1.4e-67
Identity = 167/171 (97.66%), Postives = 168/171 (98.25%), Query Frame = 0


Query: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIXXXXXXXXXXXXXXXXXXX 60
           ML+HVKGP PP PPTLPHPNWNTTVLRFTAPLALTTSTCRI XXXXXXXXXXXXXXXXXX
Sbjct: 1   MLSHVKGPFPPIPPTLPHPNWNTTVLRFTAPLALTTSTCRIAXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120
           XXXXXXXXXXXXXXXXXXXLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT
Sbjct: 61  XXXXXXXXXXXXXXXXXXXLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120

Query: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 172
           CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP
Sbjct: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 171

[Close]

BLAST of CsaV3_3G018050 vs. NCBI nr
Match: XP_022934222.1 (uncharacterized protein LOC111441457 isoform X2 [Cucurbita moschata])

HSP 1 Score: 241.5 bits (615), Expect = 2.1e-60
Identity = 156/171 (91.23%), Postives = 162/171 (94.74%), Query Frame = 0


Query: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIXXXXXXXXXXXXXXXXXXX 60
           M++HVKGP PP  P L HPNWN+ V+RFTAPLALT ++CRI XXXXXXXXXXXXXXXXXX
Sbjct: 1   MISHVKGPFPPI-PALAHPNWNSAVVRFTAPLALTRASCRIAXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120
           XXXXXXXXXXXXXXXXXXX SNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120

Query: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 172
           CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP
Sbjct: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 170

[Close]

BLAST of CsaV3_3G018050 vs. NCBI nr
Match: XP_022983921.1 (uncharacterized protein LOC111482398 isoform X2 [Cucurbita maxima])

HSP 1 Score: 241.5 bits (615), Expect = 2.1e-60
Identity = 157/171 (91.81%), Postives = 163/171 (95.32%), Query Frame = 0


Query: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIXXXXXXXXXXXXXXXXXXX 60
           M++HVKGP PP  P L HPNWN+ V+RFTAPLALT ++CRIXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MISHVKGPFPPI-PALAHPNWNSAVVRFTAPLALTRASCRIXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120
           XXXXXXXXXXXXXXXXXXX SNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120

Query: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 172
           CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP
Sbjct: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 170

[Close]

BLAST of CsaV3_3G018050 vs. NCBI nr
Match: XP_023526623.1 (uncharacterized protein LOC111790064 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 241.5 bits (615), Expect = 2.1e-60
Identity = 156/171 (91.23%), Postives = 162/171 (94.74%), Query Frame = 0


Query: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIXXXXXXXXXXXXXXXXXXX 60
           M++HVKGP PP  P L HPNWN+ V+RFTAPLALT ++CRI XXXXXXXXXXXXXXXXXX
Sbjct: 1   MISHVKGPFPPI-PALAHPNWNSAVVRFTAPLALTRASCRIAXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120
           XXXXXXXXXXXXXXXXXXX SNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120

Query: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 172
           CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP
Sbjct: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 170

[Close]

BLAST of CsaV3_3G018050 vs. TAIR10
Match: AT1G78995.1 (unknown protein)

HSP 1 Score: 152.9 bits (385), Expect = 1.8e-37
Identity = 72/92 (78.26%), Postives = 77/92 (83.70%), Query Frame = 0


Query: 80  LSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRP 139
           LSN+PQTLSGE     DCKK RIQRPKS+ AE CT+KCV TCIR GD   GEGP+NIRRP
Sbjct: 76  LSNVPQTLSGE-----DCKKQRIQRPKSKNAEKCTVKCVNTCIRSGD---GEGPINIRRP 135

Query: 140 IVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 172
           +VVFKQGFRSR YCLVECSDICNLIGDGD GP
Sbjct: 136 LVVFKQGFRSRNYCLVECSDICNLIGDGDYGP 159

[Close]

BLAST of CsaV3_3G018050 vs. TrEMBL
Match: tr|A0A0A0LA46|A0A0A0LA46_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G198460 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 2.1e-69
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIXXXXXXXXXXXXXXXXXXX 60
           MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120
           XXXXXXXXXXXXXXXXXXXLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT
Sbjct: 61  XXXXXXXXXXXXXXXXXXXLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120

Query: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 172
           CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP
Sbjct: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 171

[Close]

BLAST of CsaV3_3G018050 vs. TrEMBL
Match: tr|A0A1S3C289|A0A1S3C289_CUCME (uncharacterized protein LOC103496200 OS=Cucumis melo OX=3656 GN=LOC103496200 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 9.0e-68
Identity = 167/171 (97.66%), Postives = 168/171 (98.25%), Query Frame = 0


Query: 1   MLTHVKGPLPPTPPTLPHPNWNTTVLRFTAPLALTTSTCRIXXXXXXXXXXXXXXXXXXX 60
           ML+HVKGP PP PPTLPHPNWNTTVLRFTAPLALTTSTCRI XXXXXXXXXXXXXXXXXX
Sbjct: 1   MLSHVKGPFPPIPPTLPHPNWNTTVLRFTAPLALTTSTCRIAXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120
           XXXXXXXXXXXXXXXXXXXLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT
Sbjct: 61  XXXXXXXXXXXXXXXXXXXLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGT 120

Query: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 172
           CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP
Sbjct: 121 CIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 171

[Close]

BLAST of CsaV3_3G018050 vs. TrEMBL
Match: tr|A0A2N9J073|A0A2N9J073_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57711 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 2.8e-45
Identity = 86/92 (93.48%), Postives = 89/92 (96.74%), Query Frame = 0


Query: 80  LSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRP 139
           LSNIPQTLSGECA P DCKKARIQRPKSRKAESCTIKCV TCIRGG+GSPGEGPLN+RRP
Sbjct: 702 LSNIPQTLSGECALPKDCKKARIQRPKSRKAESCTIKCVTTCIRGGEGSPGEGPLNVRRP 761

Query: 140 IVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 172
           +VVFKQGFRSRQYCLVECSDICNLIGDGDDGP
Sbjct: 762 LVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 793

[Close]

BLAST of CsaV3_3G018050 vs. TrEMBL
Match: tr|A0A2I4G305|A0A2I4G305_9ROSI (uncharacterized protein LOC109004254 OS=Juglans regia OX=51240 GN=LOC109004254 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.7e-45
Identity = 85/92 (92.39%), Postives = 89/92 (96.74%), Query Frame = 0


Query: 80  LSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRP 139
           LSNIPQTLSGECA P DCK+ARIQRPKSRKAESCTIKCV TCIRGG+GSPGEGPLN+RRP
Sbjct: 88  LSNIPQTLSGECASPKDCKRARIQRPKSRKAESCTIKCVTTCIRGGEGSPGEGPLNVRRP 147

Query: 140 IVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 172
           +VVFKQGFRSRQYCLVECSDICNLIGDGDDGP
Sbjct: 148 LVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 179

[Close]

BLAST of CsaV3_3G018050 vs. TrEMBL
Match: tr|A0A2P4KB62|A0A2P4KB62_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_75698 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 8.2e-45
Identity = 85/92 (92.39%), Postives = 88/92 (95.65%), Query Frame = 0


Query: 80  LSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRP 139
           LSNIPQTLSGECA P DCKKARIQRPKSRKAESCTIKCV TCIRGG+GSPGEGP N+RRP
Sbjct: 92  LSNIPQTLSGECALPKDCKKARIQRPKSRKAESCTIKCVTTCIRGGEGSPGEGPFNVRRP 151

Query: 140 IVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 172
           +VVFKQGFRSRQYCLVECSDICNLIGDGDDGP
Sbjct: 152 LVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 183

The following BLAST results are available for this feature:

BLAST of CsaV3_3G018050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140725.1	3.2e-69	100.00	PREDICTED: uncharacterized protein LOC101203967 [Cucumis sativus] >KGN57482.1 hy...	[more]
XP_008456185.1	1.4e-67	97.66	PREDICTED: uncharacterized protein LOC103496200 [Cucumis melo]	[more]
XP_022934222.1	2.1e-60	91.23	uncharacterized protein LOC111441457 isoform X2 [Cucurbita moschata]	[more]
XP_022983921.1	2.1e-60	91.81	uncharacterized protein LOC111482398 isoform X2 [Cucurbita maxima]	[more]
XP_023526623.1	2.1e-60	91.23	uncharacterized protein LOC111790064 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_3G018050 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G78995.1	1.8e-37	78.26	unknown protein	[more]

BLAST of CsaV3_3G018050 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G018050 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LA46\|A0A0A0LA46_CUCSA	2.1e-69	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G198460 PE=4 SV=1	[more]
tr\|A0A1S3C289\|A0A1S3C289_CUCME	9.0e-68	97.66	uncharacterized protein LOC103496200 OS=Cucumis melo OX=3656 GN=LOC103496200 PE=...	[more]
tr\|A0A2N9J073\|A0A2N9J073_FAGSY	2.8e-45	93.48	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57711 PE=4 SV=1	[more]
tr\|A0A2I4G305\|A0A2I4G305_9ROSI	3.7e-45	92.39	uncharacterized protein LOC109004254 OS=Juglans regia OX=51240 GN=LOC109004254 P...	[more]
tr\|A0A2P4KB62\|A0A2P4KB62_QUESU	8.2e-45	92.39	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_75698 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:2001142	nicotinate transport
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0009863	salicylic acid mediated signaling pathway
biological_process	GO:0010363	regulation of plant-type hypersensitive response
biological_process	GO:0006612	protein targeting to membrane
biological_process	GO:0009860	pollen tube growth
biological_process	GO:0009827	plant-type cell wall modification
biological_process	GO:0015706	nitrate transport
biological_process	GO:2001143	N-methylnicotinate transport
biological_process	GO:0009867	jasmonic acid mediated signaling pathway
biological_process	GO:0009693	ethylene biosynthetic process
biological_process	GO:0030968	endoplasmic reticulum unfolded protein response
biological_process	GO:0006865	amino acid transport
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0030154	cell differentiation
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0090416	nicotinate transporter activity
molecular_function	GO:0090417	N-methylnicotinate transporter activity
molecular_function	GO:0022857	transmembrane transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G018050.1	CsaV3_3G018050.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..83
None	No IPR available	PANTHER	PTHR36006	FAMILY NOT NAMED	coord: 36..171
None	No IPR available	PANTHER	PTHR36006:SF2	SUBFAMILY NOT NAMED	coord: 36..171

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_3G018050	CSPI03G17980	Wild cucumber (PI 183967)	cpicucB144
CsaV3_3G018050	Cucsa.108770	Cucumber (Gy14) v1	cgycucB137
CsaV3_3G018050	CmaCh14G008830	Cucurbita maxima (Rimu)	cmacucB0285
CsaV3_3G018050	CmoCh14G009010	Cucurbita moschata (Rifu)	cmocucB0276
CsaV3_3G018050	Cp4.1LG03g05450	Cucurbita pepo (Zucchini)	cpecucB0753
CsaV3_3G018050	CsGy3G017920	Cucumber (Gy14) v2	cgybcucB117
CsaV3_3G018050	Carg24253	Silver-seed gourd	carcucB0203
CsaV3_3G018050	Cla013114	Watermelon (97103) v1	cucwmB252
CsaV3_3G018050	MELO3C019561	Melon (DHL92) v3.5.1	cucmeB247
CsaV3_3G018050	ClCG05G010440	Watermelon (Charleston Gray)	cucwcgB238
CsaV3_3G018050	Lsi05G002560	Bottle gourd (USVL1VR-Ls)	cuclsiB230
CsaV3_3G018050	MELO3C019561.2	Melon (DHL92) v3.6.1	cucmedB246
CsaV3_3G018050	Cla97C05G092820	Watermelon (97103) v2	cucwmbB217
CsaV3_3G018050	Bhi01G001298	Wax gourd	cucwgoB287

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_3G018050	Silver-seed gourd	carcucB0802
CsaV3_3G018050	Cucurbita maxima (Rimu)	cmacucB0550
CsaV3_3G018050	Cucurbita moschata (Rifu)	cmocucB0535
CsaV3_3G018050	Cucurbita pepo (Zucchini)	cpecucB0689