Csa3G119480 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa3G119480
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr3 : 6719700 .. 6721005 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAATCTTTAGAAATAGTCCACGAAGACATTTATGAAAATTTTGTCTGGTTTCCTCTGGCTGAGTTCATATGAATAAATTATATGGTACTAAGCCAATTGCCACCCCAAATTCTAGTCAGTACATAACAGAGAGAGAGAGAGAGAGAGAGAGAAGGGAGAAAATGGGAAGTGAAGCAAAGCTAAGGCGAGATTATGAAGTACCAAAGCTTCCATTACTTGCAATTACAGCAATGGAGTCTCCAGATCGTTCTGGAATGCTAACCCCACCAATGTATTCCTCAGTTTCAGTCCCATTTCGATGGGAAGAAGAACCTGGCAAGCCCAGGTTTTGTTTCAATTCTCTTAACATTCCCACTCAAACTCAAACTCAAACATATTCCCTTGAACTTCCACCAAGATTGTTACTAATGGATCCCAAAATCTCAAAACTCTCTCCTCCCATCCCCTCTCAGAAAGGGTTTTTCCAGTTTCATAAGCACTGTTGTAGCTCATTCAGATTTGATAAAACTCAGCTTGGAGCTATGGTTTTGAGAAAGAGAGGAGTGTTAATTGAGAAGGAATGGTTTTGTTGGTTGGGAAAATTGAGTTTTAGGAGCAAAGGGGAAGTTGGGTCTGACTATGGTGCTGTATTTCCTTCTTCTTTGGATAAGGAGAAAAGCAGTTCAAGGATGAAAGTTGCTGTGAACCAGAAAGGTGGGAGCTTTTCTTCTTGTTTTGTCCAAGCCAAGACTGAGTTTTGGGTAATTTTAGAATAACCCATCTTCTTCTCTGATTTATACATGCATATTGCATATGTTAACAATCATGATATTTTGAAGTTTATAAACATTTCCTAAGTAAACACGAGGGAAATGAATGTTTTCTTCTAAAAGTCATCACCTGTTCTCCTTGATCATGCAGTTCTGTAATTTTTCAAGCCATTTGTGATTATTAATAAAACTATTACTATTTAAGGAATTGCAGGGAAACATAGGGGAAGGGTTTAAACAGATCAACATTCCATGGAAGAGCAAAAGAGCATAAGAAAGAGGACTGGTAAATCATTAGAATGTTTATGAATAAAACCGAGTTTAGCTTGTTGTAATGTAAATGCATCAAATAATCGTAATATGGAGGAGGACTAATGACTTAGTTAATGACTGAGGTCTTGTGTATTTGATATTCTTGTACAGAAATAATGTTATGAATCATATGGCTTTATGAGTTGAATCATCATTTTTTCCCGAAAATTTTCAAGAAGTGGAAGAAATCCTTTTAATTCCTCGCATGTTTATCCATCTTGACTGTGATGAACATTCAAAACAA

mRNA sequence

ATGAATAAATTATATGGTACTAAGCCAATTGCCACCCCAAATTCTAGTCAGTACATAACAGAGAGAGAGAGAGAGAGAGAGAGAAGGGAGAAAATGGGAAGTGAAGCAAAGCTAAGGCGAGATTATGAAGTACCAAAGCTTCCATTACTTGCAATTACAGCAATGGAGTCTCCAGATCGTTCTGGAATGCTAACCCCACCAATGTATTCCTCAGTTTCAGTCCCATTTCGATGGGAAGAAGAACCTGGCAAGCCCAGGTTTTGTTTCAATTCTCTTAACATTCCCACTCAAACTCAAACTCAAACATATTCCCTTGAACTTCCACCAAGATTGTTACTAATGGATCCCAAAATCTCAAAACTCTCTCCTCCCATCCCCTCTCAGAAAGGGTTTTTCCAGTTTCATAAGCACTGTTGTAGCTCATTCAGATTTGATAAAACTCAGCTTGGAGCTATGGTTTTGAGAAAGAGAGGAGTGTTAATTGAGAAGGAATGGTTTTGTTGGTTGGGAAAATTGAGTTTTAGGAGCAAAGGGGAAGTTGGGTCTGACTATGGTGCTGTATTTCCTTCTTCTTTGGATAAGGAGAAAAGCAGTTCAAGGATGAAAGTTGCTGTGAACCAGAAAGGTGGGAGCTTTTCTTCTTGTTTTGTCCAAGCCAAGACTGAGTTTTGGGGAAACATAGGGGAAGGGTTTAAACAGATCAACATTCCATGGAAGAGCAAAAGAGCATAA

Coding sequence (CDS)

ATGAATAAATTATATGGTACTAAGCCAATTGCCACCCCAAATTCTAGTCAGTACATAACAGAGAGAGAGAGAGAGAGAGAGAGAAGGGAGAAAATGGGAAGTGAAGCAAAGCTAAGGCGAGATTATGAAGTACCAAAGCTTCCATTACTTGCAATTACAGCAATGGAGTCTCCAGATCGTTCTGGAATGCTAACCCCACCAATGTATTCCTCAGTTTCAGTCCCATTTCGATGGGAAGAAGAACCTGGCAAGCCCAGGTTTTGTTTCAATTCTCTTAACATTCCCACTCAAACTCAAACTCAAACATATTCCCTTGAACTTCCACCAAGATTGTTACTAATGGATCCCAAAATCTCAAAACTCTCTCCTCCCATCCCCTCTCAGAAAGGGTTTTTCCAGTTTCATAAGCACTGTTGTAGCTCATTCAGATTTGATAAAACTCAGCTTGGAGCTATGGTTTTGAGAAAGAGAGGAGTGTTAATTGAGAAGGAATGGTTTTGTTGGTTGGGAAAATTGAGTTTTAGGAGCAAAGGGGAAGTTGGGTCTGACTATGGTGCTGTATTTCCTTCTTCTTTGGATAAGGAGAAAAGCAGTTCAAGGATGAAAGTTGCTGTGAACCAGAAAGGTGGGAGCTTTTCTTCTTGTTTTGTCCAAGCCAAGACTGAGTTTTGGGGAAACATAGGGGAAGGGTTTAAACAGATCAACATTCCATGGAAGAGCAAAAGAGCATAA

Protein sequence

MNKLYGTKPIATPNSSQYITERERERERREKMGSEAKLRRDYEVPKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQKGGSFSSCFVQAKTEFWGNIGEGFKQINIPWKSKRA*

Homology

[Close]

BLAST of Csa3G119480 vs. TrEMBL
Match: A0A0A0L338_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119480 PE=4 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 1.4e-140
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 1


Query: 1   MNKLYGTKPIATPNSSQYITERERERERREKMGSEAKLRRDYEVPKLPLLAITAMESPDR 60
           MNKLYGTKPIATPNSSQYITERERERERREKMGSEAKLRRDYEVPKLPLLAITAMESPDR
Sbjct: 1   MNKLYGTKPIATPNSSQYITERERERERREKMGSEAKLRRDYEVPKLPLLAITAMESPDR 60

Query: 61  SGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISK 120
           SGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISK
Sbjct: 61  SGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISK 120

Query: 121 LSPPIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEV 180
           LSPPIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEV
Sbjct: 121 LSPPIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEV 180

Query: 181 GSDYGAVFPSSLDKEKSSSRMKVAVNQKGGSFSSCFVQAKTEFWELQGNIGEGFKQINIP 240
           GSDYGAVFPSSLDKEKSSSRMKVAVNQKGGSFSSCFVQAKTEFWELQGNIGEGFKQINIP
Sbjct: 181 GSDYGAVFPSSLDKEKSSSRMKVAVNQKGGSFSSCFVQAKTEFWELQGNIGEGFKQINIP 240

Query: 241 WKSKRA 247
           WKSKRA
Sbjct: 241 WKSKRA 246

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BLAST of Csa3G119480 vs. TrEMBL
Match: A0A068UKB7_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00027699001 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.4e-28
Identity = 91/231 (39.39%), Postives = 127/231 (54.98%), Query Frame = 1


Query: 45  PKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQT-Y 104
           PKLPL ++  ++SP+ SGMLTPP+Y+S SVPFRWEEEPGKPR C   + +PT T T++  
Sbjct: 9   PKLPLFSMATVQSPEHSGMLTPPLYTSASVPFRWEEEPGKPRPCTALITLPTSTTTESPR 68

Query: 105 SLELPPRLLLMDPKISKLSPPIPSQKGFFQF--HKHCCSSFRF----------------D 164
            L+LPPRL L   KI+K   P    +G +     K   SSFRF                +
Sbjct: 69  CLDLPPRLFLEPSKITKTPSPTTVLEGPYVLGRPKFTSSSFRFFRERQGSFDSSSSKSPE 128

Query: 165 KTQLGAMVLRKRGVLIEKEWFCWLGKL-SFRS-KGEVGSDYGAVFPSSLDKEKSSS---- 224
           + QL +MVL K+       +  W  K   FRS K E G     V PSS+  + + +    
Sbjct: 129 RGQLSSMVLGKKLHKGRGLFGSWRQKTPKFRSGKREAGGSCSFVHPSSVSVDGADTGSDD 188

Query: 225 ----RMKVAVNQKGGSFSSCFVQAKTEFWELQGNIGEGFKQINIPWKSKRA 247
               R+K+   ++ GSFSS   QAK++FW     + EGFK + +PWKS+++
Sbjct: 189 GNIPRVKIGRIRRNGSFSS-LSQAKSQFW---AAVYEGFKHV-LPWKSRKS 234

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BLAST of Csa3G119480 vs. TrEMBL
Match: B9SBF5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0716950 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.7e-27
Identity = 97/242 (40.08%), Postives = 128/242 (52.89%), Query Frame = 1


Query: 32  MGSEAKLRRDYEVPKLPL-LAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFN 91
           MGSEA+   D   P+LPL L    ++SP RSGMLTPP+YSS +VPFRWEEEPGKPR C  
Sbjct: 1   MGSEAEAE-DSSTPRLPLFLKPPYVQSPQRSGMLTPPLYSSAAVPFRWEEEPGKPRECSG 60

Query: 92  SLNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQKG-------------FFQFHKH 151
           ++  PT    +   LELPPRLLL +  +SKL  P     G             F    + 
Sbjct: 61  AITTPTDLSPK--CLELPPRLLL-EANVSKLPSPTTVLDGPYTGRSSRFQSSSFRMIRRE 120

Query: 152 CCSSFRF---DKTQLGAMVLRKRGVLIEKEWFCW-LGKLSFRSKGEV-GSDYGAVFPSSL 211
           C  SFR    ++ Q  A+VL KRG+        W  G+  F+ K EV G+ Y  VFPSS 
Sbjct: 121 CYGSFRTCSPERDQFTALVLSKRGIKDRGFLGSWRWGRRGFKGKREVAGASY--VFPSSS 180

Query: 212 -----------DKEKSSSRMKVAVNQKGGSFSSCFVQAKTEFWELQGNIGEGFKQINIPW 244
                      +KE SS  + +   ++ GSFS+    +++ FW     I EG KQ+ +PW
Sbjct: 181 MDREVEDGNEEEKEISSKNVTITRIRRSGSFST---SSRSHFW---ATIYEGLKQV-VPW 229

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BLAST of Csa3G119480 vs. TrEMBL
Match: A0A0D2QJ14_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G153800 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.3e-25
Identity = 87/236 (36.86%), Postives = 118/236 (50.00%), Query Frame = 1


Query: 32  MGSEAKLRRDYEVPKLPLLAITA--MESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCF 91
           MG+EA+    Y  PKLPL +     M+SP+RSG  TPP++ S SVPFRWE+EPGKP+ C 
Sbjct: 1   MGTEAENESSY-TPKLPLFSAPQAHMQSPERSGTSTPPLHVSASVPFRWEDEPGKPKPCT 60

Query: 92  NSLNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQKGFFQFHKHCCSSFRF----- 151
                          LELPPRLL      + L P        F+    C  SFR      
Sbjct: 61  TLTLFSNPNHLAQKCLELPPRLLQDAKSTTVLEPARLQSSSSFRMGSECYGSFRVGSVSP 120

Query: 152 DKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEV-GSDYGAVFPSSLDK--------- 211
           ++ QLG MVL KRG   +K +     + +F++K EV G+    VFPSS DK         
Sbjct: 121 ERVQLGTMVLSKRGTYKDKGFLGSWKRKTFKAKREVGGAGKSYVFPSSGDKDSECSREEE 180

Query: 212 -----EKSSSRMKVAVNQKGGSFSSCFVQAKTEFWELQGNIGEGFKQINIPWKSKR 246
                E +SS +K    ++ GSF + F  +K+ FW     I +G K + +PW  K+
Sbjct: 181 EEEEEESNSSSVKTTRIKRVGSFHNLF-NSKSHFW---ATIYQGLK-LAVPWNKKK 230

[Close]

BLAST of Csa3G119480 vs. TrEMBL
Match: A0A0B0MN05_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_21896 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.2e-24
Identity = 85/231 (36.80%), Postives = 117/231 (50.65%), Query Frame = 1


Query: 32  MGSEAKLRRDYEVPKLPLLAITA--MESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCF 91
           MG+EA+    Y  PKLPL +     M+SP+RSG  TPP++ S SVPFRWE+EPGKP+ C 
Sbjct: 1   MGTEAEQESSY-TPKLPLFSAPQAHMQSPERSGTSTPPLHVSASVPFRWEDEPGKPKPCT 60

Query: 92  NSLNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQKGFFQFHKHCCSSFRF----- 151
                          LELPPRLL      + L P        F+    C  SFR      
Sbjct: 61  TLTLFSNPNHLAQKCLELPPRLLQDAKSTTVLEPARLQSSSSFRMGSECYGSFRVGSVSP 120

Query: 152 DKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGE-VGSDYGAVFPSSLDK--------- 211
           ++ QLG +VL KRG   +K +     + +F++K E  G+    VFPSS DK         
Sbjct: 121 ERVQLGTVVLSKRGTYKDKGFLGSWKRKTFKAKREGGGAGKSYVFPSSGDKDSECSREEE 180

Query: 212 -EKSSSRMKVAVNQKGGSFSSCFVQAKTEFWELQGNIGEGFKQINIPWKSK 245
            E +SS +K+   ++ GSF + F  +K+ FW     I +G K + +PW  K
Sbjct: 181 EESNSSSVKITRIKRVGSFHNLF-NSKSHFW---ATIYQGLK-LAVPWNKK 225

[Close]

BLAST of Csa3G119480 vs. TAIR10
Match: AT5G53030.1 (AT5G53030.1 unknown protein)

HSP 1 Score: 62.8 bits (151), Expect = 3.5e-10
Identity = 64/208 (30.77%), Postives = 89/208 (42.79%), Query Frame = 1


Query: 62  GMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISKL 121
           G+ TPP+  + SVPF WEE PGKPR       +  +   +  SLELPPRL+L     +  
Sbjct: 36  GLATPPVNIAGSVPFLWEEAPGKPRRVKKPARLNQKGVVR--SLELPPRLVLPGESTTVN 95

Query: 122 SP-PIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRK-RGV---LIEKEWFCWLGKLSFRS 181
            P P     G +   +   S  R       A V+RK RGV     EKE     G   + S
Sbjct: 96  EPSPTTVLDGPYDLRRRSLSLPR------SAAVIRKLRGVPAPAPEKEERLVGGSSRWGS 155

Query: 182 KGEVGSDYGAVFPSSLDKE------------------KSSSRMKVAVNQKGGSFSSCFVQ 241
            G        +F  S  ++                     +++K+    K GSF +    
Sbjct: 156 FGNCKEVSEGIFDFSRFRDDGYDCRRDWAGGGGVGNFAGDAKVKLYRIIKKGSFFNLSHT 215

Query: 242 AKTEFW-ELQGNIGEGFKQINIPWKSKR 246
            K++FW ++Q  + EGFKQ+ IPWK K+
Sbjct: 216 TKSDFWLKMQARVYEGFKQV-IPWKRKQ 234

[Close]

BLAST of Csa3G119480 vs. TAIR10
Match: AT4G27810.1 (AT4G27810.1 unknown protein)

HSP 1 Score: 53.9 bits (128), Expect = 1.6e-07
Identity = 30/74 (40.54%), Postives = 38/74 (51.35%), Query Frame = 1


Query: 45  PKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQ--- 104
           PKLPL +I    + D  G+ TPP+  + SVPF WEE PGKPR    +  + ++   +   
Sbjct: 15  PKLPLFSIPFNRACDTPGLATPPVNIAGSVPFLWEEAPGKPRVSDENKPLASKQNEREGG 74

Query: 105 ----TYSLELPPRL 112
                  LELPPRL
Sbjct: 75  GGGVVRCLELPPRL 88

[Close]

BLAST of Csa3G119480 vs. TAIR10
Match: AT2G46535.1 (AT2G46535.1 unknown protein)

HSP 1 Score: 50.4 bits (119), Expect = 1.8e-06
Identity = 53/217 (24.42%), Postives = 86/217 (39.63%), Query Frame = 1


Query: 38  LRRDYEVPKLPLLAITAMES--------PDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCF 97
           +R D E  K  L  + A +S        P    +   P+++  SVPF WE++PGKP+   
Sbjct: 1   MRGDKEEEKAKLALVLAAKSRSLLYTSSPASPRVFASPIHTLASVPFCWEDQPGKPKHPL 60

Query: 98  NSLNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQK-GFFQFHKHCCSSFRFDKTQ 157
             L+ P         L+LPPRLLL          P+P +K G  +F +            
Sbjct: 61  RPLSYPK-------CLDLPPRLLLPG---EFTQMPLPERKHGLLRFLRR----------- 120

Query: 158 LGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQK 217
                 + RG ++ +      G   F S+ +   D             + + MK+    +
Sbjct: 121 ------KGRGDVVVR------GNYVFLSENQRAGD-----------NINENNMKIMKFNR 169

Query: 218 GGSFSSCFVQAKTEFWELQGNIGEGFKQINIPWKSKR 246
            GS+        + FW   G++ +G K + +PWK+K+
Sbjct: 181 SGSYHGGGSVKGSHFW---GSLCKGLK-LAMPWKNKK 169

[Close]

BLAST of Csa3G119480 vs. TAIR10
Match: AT4G00950.1 (AT4G00950.1 Protein of unknown function (DUF688))

HSP 1 Score: 48.5 bits (114), Expect = 6.8e-06
Identity = 37/106 (34.91%), Postives = 52/106 (49.06%), Query Frame = 1


Query: 35  EAKLRRDYEVPKLPLLAITAMESPDRSGMLTPPMYSSV--SVPFRWEEEPGKPRFCFNSL 94
           E +   +  V KLP+L     +    S  ++ P++SS+  SVPF WEEEPGKP+    S 
Sbjct: 6   ETEQEGNLTVMKLPVLPT---KPNTHSHSMSSPIHSSISASVPFSWEEEPGKPKQHSTSS 65

Query: 95  NIPTQTQTQT----------YSLELPPRLLLMDP---KISKLSPPI 126
           +  + +   T           SLELPPRL L++     ++KL  PI
Sbjct: 66  SSSSSSSPLTSYSSSPFETHKSLELPPRLHLLEKDGGSVTKLHSPI 108

[Close]

BLAST of Csa3G119480 vs. NCBI nr
Match: gi|778676854|ref|XP_011650674.1| (PREDICTED: uncharacterized protein At4g00950 isoform X1 [Cucumis sativus])

HSP 1 Score: 506.9 bits (1304), Expect = 2.0e-140
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 1


Query: 1   MNKLYGTKPIATPNSSQYITERERERERREKMGSEAKLRRDYEVPKLPLLAITAMESPDR 60
           MNKLYGTKPIATPNSSQYITERERERERREKMGSEAKLRRDYEVPKLPLLAITAMESPDR
Sbjct: 1   MNKLYGTKPIATPNSSQYITERERERERREKMGSEAKLRRDYEVPKLPLLAITAMESPDR 60

Query: 61  SGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISK 120
           SGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISK
Sbjct: 61  SGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISK 120

Query: 121 LSPPIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEV 180
           LSPPIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEV
Sbjct: 121 LSPPIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEV 180

Query: 181 GSDYGAVFPSSLDKEKSSSRMKVAVNQKGGSFSSCFVQAKTEFWELQGNIGEGFKQINIP 240
           GSDYGAVFPSSLDKEKSSSRMKVAVNQKGGSFSSCFVQAKTEFWELQGNIGEGFKQINIP
Sbjct: 181 GSDYGAVFPSSLDKEKSSSRMKVAVNQKGGSFSSCFVQAKTEFWELQGNIGEGFKQINIP 240

Query: 241 WKSKRA 247
           WKSKRA
Sbjct: 241 WKSKRA 246

[Close]

BLAST of Csa3G119480 vs. NCBI nr
Match: gi|778676857|ref|XP_004133807.2| (PREDICTED: uncharacterized protein At4g00950 isoform X2 [Cucumis sativus])

HSP 1 Score: 496.1 bits (1276), Expect = 3.5e-137
Identity = 243/246 (98.78%), Postives = 243/246 (98.78%), Query Frame = 1


Query: 1   MNKLYGTKPIATPNSSQYITERERERERREKMGSEAKLRRDYEVPKLPLLAITAMESPDR 60
           MNKLYGTKPIATPNSSQYITERERERERREKMGSEAKLRRDYEVPKLPLLAITAMESPDR
Sbjct: 1   MNKLYGTKPIATPNSSQYITERERERERREKMGSEAKLRRDYEVPKLPLLAITAMESPDR 60

Query: 61  SGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISK 120
           SGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISK
Sbjct: 61  SGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISK 120

Query: 121 LSPPIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEV 180
           LSPPIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEV
Sbjct: 121 LSPPIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEV 180

Query: 181 GSDYGAVFPSSLDKEKSSSRMKVAVNQKGGSFSSCFVQAKTEFWELQGNIGEGFKQINIP 240
           GSDYGAVFPSSLDKEKSSSRMKVAVNQKGGSFSSCFVQAKTEFW   GNIGEGFKQINIP
Sbjct: 181 GSDYGAVFPSSLDKEKSSSRMKVAVNQKGGSFSSCFVQAKTEFW---GNIGEGFKQINIP 240

Query: 241 WKSKRA 247
           WKSKRA
Sbjct: 241 WKSKRA 243

[Close]

BLAST of Csa3G119480 vs. NCBI nr
Match: gi|778676863|ref|XP_011650676.1| (PREDICTED: uncharacterized protein At4g00950 isoform X4 [Cucumis sativus])

HSP 1 Score: 429.1 bits (1102), Expect = 5.2e-117
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 1


Query: 1   MNKLYGTKPIATPNSSQYITERERERERREKMGSEAKLRRDYEVPKLPLLAITAMESPDR 60
           MNKLYGTKPIATPNSSQYITERERERERREKMGSEAKLRRDYEVPKLPLLAITAMESPDR
Sbjct: 1   MNKLYGTKPIATPNSSQYITERERERERREKMGSEAKLRRDYEVPKLPLLAITAMESPDR 60

Query: 61  SGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISK 120
           SGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISK
Sbjct: 61  SGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISK 120

Query: 121 LSPPIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEV 180
           LSPPIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEV
Sbjct: 121 LSPPIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEV 180

Query: 181 GSDYGAVFPSSLDKEKSSSRMKVAVNQKG 210
           GSDYGAVFPSSLDKEKSSSRMKVAVNQKG
Sbjct: 181 GSDYGAVFPSSLDKEKSSSRMKVAVNQKG 209

[Close]

BLAST of Csa3G119480 vs. NCBI nr
Match: gi|778676860|ref|XP_011650675.1| (PREDICTED: uncharacterized protein At4g00950 isoform X3 [Cucumis sativus])

HSP 1 Score: 429.1 bits (1102), Expect = 5.2e-117
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 1


Query: 1   MNKLYGTKPIATPNSSQYITERERERERREKMGSEAKLRRDYEVPKLPLLAITAMESPDR 60
           MNKLYGTKPIATPNSSQYITERERERERREKMGSEAKLRRDYEVPKLPLLAITAMESPDR
Sbjct: 1   MNKLYGTKPIATPNSSQYITERERERERREKMGSEAKLRRDYEVPKLPLLAITAMESPDR 60

Query: 61  SGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISK 120
           SGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISK
Sbjct: 61  SGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISK 120

Query: 121 LSPPIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEV 180
           LSPPIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEV
Sbjct: 121 LSPPIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEV 180

Query: 181 GSDYGAVFPSSLDKEKSSSRMKVAVNQKG 210
           GSDYGAVFPSSLDKEKSSSRMKVAVNQKG
Sbjct: 181 GSDYGAVFPSSLDKEKSSSRMKVAVNQKG 209

[Close]

BLAST of Csa3G119480 vs. NCBI nr
Match: gi|1009142404|ref|XP_015888705.1| (PREDICTED: uncharacterized protein At4g00950 [Ziziphus jujuba])

HSP 1 Score: 143.3 bits (360), Expect = 5.7e-31
Identity = 97/235 (41.28%), Postives = 130/235 (55.32%), Query Frame = 1


Query: 32  MGSEAKLRRDYEVPKLPLLAITA-MESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFN 91
           MGSEA+       PKLPL ++   M+SP+R GMLTPP+Y+SVSVPFRWEEEPGKPR C  
Sbjct: 1   MGSEAEPESS-STPKLPLFSLPPPMQSPERPGMLTPPLYASVSVPFRWEEEPGKPRTCNA 60

Query: 92  SLNIPTQTQTQTYSLELPPRLLLMDPKI----SKLSPPIPSQKGF----FQFHKHCCSSF 151
              I   T      LELPPRLLL D K+    +    P  S+  F    F+  K C  SF
Sbjct: 61  LATIFNPTDITPKCLELPPRLLL-DTKLPSPTTVFEGPYVSRSRFQSSSFRIGKECYGSF 120

Query: 152 RFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEVGSDYGAVFPSSLD--------- 211
             ++ +LGAMVL K+GV  E+ WF    +   +   +VG     VFPSS+D         
Sbjct: 121 SPERGRLGAMVLSKKGVK-ERGWFGSWRRRVIKGNKDVGGGSSYVFPSSVDRENGDGGGN 180

Query: 212 ---KEKSSSRMKVAVNQKGGSFSSCFVQAKTEFWELQGNIGEGFKQINIPWKSKR 246
              +E +  ++K+   ++GGSFS+     ++ FWE    I EG K   +PWKS++
Sbjct: 181 EGERENTGGKVKMTRIRRGGSFSN-ITYPRSSFWE---TIYEGLKHA-VPWKSRK 227

The following BLAST results are available for this feature:

BLAST of Csa3G119480 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L338_CUCSA	1.4e-140	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119480 PE=4 SV=1	[more]
A0A068UKB7_COFCA	5.4e-28	39.39	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00027699001 PE=4 SV=1	[more]
B9SBF5_RICCO	2.7e-27	40.08	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0716950 PE=4 SV=1	[more]
A0A0D2QJ14_GOSRA	3.3e-25	36.86	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G153800 PE=4 SV=1	[more]
A0A0B0MN05_GOSAR	1.2e-24	36.80	Uncharacterized protein OS=Gossypium arboreum GN=F383_21896 PE=4 SV=1	[more]

BLAST of Csa3G119480 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G53030.1	3.5e-10	30.77	unknown protein	[more]
AT4G27810.1	1.6e-07	40.54	unknown protein	[more]
AT2G46535.1	1.8e-06	24.42	unknown protein	[more]
AT4G00950.1	6.8e-06	34.91	Protein of unknown function (DUF688)	[more]

BLAST of Csa3G119480 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778676854\|ref\|XP_011650674.1\|	2.0e-140	100.00	PREDICTED: uncharacterized protein At4g00950 isoform X1 [Cucumis sativus]	[more]
gi\|778676857\|ref\|XP_004133807.2\|	3.5e-137	98.78	PREDICTED: uncharacterized protein At4g00950 isoform X2 [Cucumis sativus]	[more]
gi\|778676863\|ref\|XP_011650676.1\|	5.2e-117	100.00	PREDICTED: uncharacterized protein At4g00950 isoform X4 [Cucumis sativus]	[more]
gi\|778676860\|ref\|XP_011650675.1\|	5.2e-117	100.00	PREDICTED: uncharacterized protein At4g00950 isoform X3 [Cucumis sativus]	[more]
gi\|1009142404\|ref\|XP_015888705.1\|	5.7e-31	41.28	PREDICTED: uncharacterized protein At4g00950 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008536	Ran GTPase binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU086282	cucumber EST collection version 3.0	transcribed_cluster
CU150513	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa3G119480.2	Csa3G119480.2	mRNA
Csa3G119480.1	Csa3G119480.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU086282	CU086282	transcribed_cluster
CU150513	CU150513	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34371	FAMILY NOT NAMED	coord: 1..242 score: 1.1
None	No IPR available	PANTHER	PTHR34371:SF2	SUBFAMILY NOT NAMED	coord: 1..242 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa3G119480	Cla021146	Watermelon (97103) v1	cuwmB233
Csa3G119480	MELO3C006014	Melon (DHL92) v3.5.1	cumeB236
Csa3G119480	ClCG05G000740	Watermelon (Charleston Gray)	cuwcgB222
Csa3G119480	Lsi05G021320	Bottle gourd (USVL1VR-Ls)	culsiB209
Csa3G119480	MELO3C006014.2	Melon (DHL92) v3.6.1	cumedB223
Csa3G119480	Cla97C05G080850	Watermelon (97103) v2	cuwmbB204
Csa3G119480	Bhi01G000365	Wax gourd	cuwgoB284
Csa3G119480	CSPI03G07840	Wild cucumber (PI 183967)	cpicuB120
Csa3G119480	Cucsa.259320	Cucumber (Gy14) v1	cgycuB366
Csa3G119480	CmaCh14G021160	Cucurbita maxima (Rimu)	cmacuB253
Csa3G119480	CmoCh14G021780	Cucurbita moschata (Rifu)	cmocuB239
Csa3G119480	Cp4.1LG03g15950	Cucurbita pepo (Zucchini)	cpecuB609
Csa3G119480	CsGy3G007980	Cucumber (Gy14) v2	cgybcuB109
Csa3G119480	Carg25702	Silver-seed gourd	carcuB0132

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa3G119480	Melon (DHL92) v3.6.1	cumedB157
Csa3G119480	Silver-seed gourd	carcuB1007
Csa3G119480	Watermelon (97103) v2	cuwmbB173
Csa3G119480	Watermelon (97103) v2	cuwmbB224
Csa3G119480	Wax gourd	cuwgoB261
Csa3G119480	Wax gourd	cuwgoB296
Csa3G119480	Cucumber (Chinese Long) v2	cucuB095
Csa3G119480	Cucumber (Gy14) v1	cgycuB307
Csa3G119480	Cucurbita maxima (Rimu)	cmacuB285
Csa3G119480	Cucurbita maxima (Rimu)	cmacuB818
Csa3G119480	Cucurbita moschata (Rifu)	cmocuB271
Csa3G119480	Cucurbita moschata (Rifu)	cmocuB593
Csa3G119480	Cucurbita moschata (Rifu)	cmocuB806
Csa3G119480	Melon (DHL92) v3.5.1	cumeB175
Csa3G119480	Watermelon (Charleston Gray)	cuwcgB204
Csa3G119480	Watermelon (Charleston Gray)	cuwcgB238
Csa3G119480	Watermelon (97103) v1	cuwmB258
Csa3G119480	Watermelon (97103) v1	cuwmB252
Csa3G119480	Cucurbita pepo (Zucchini)	cpecuB720
Csa3G119480	Cucurbita pepo (Zucchini)	cpecuB862
Csa3G119480	Bottle gourd (USVL1VR-Ls)	culsiB151
Csa3G119480	Cucumber (Gy14) v2	cgybcuB206