Csa3G119480.2 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa3G119480.2
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr3 : 6719700 .. 6721005 (-)
Sequence length	732

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAATCTTTAGAAATAGTCCACGAAGACATTTATGAAAATTTTGTCTGGTTTCCTCTGGCTGAGTTCATATGAATAAATTATATGGTACTAAGCCAATTGCCACCCCAAATTCTAGTCAGTACATAACAGAGAGAGAGAGAGAGAGAGAGAGAAGGGAGAAAATGGGAAGTGAAGCAAAGCTAAGGCGAGATTATGAAGTACCAAAGCTTCCATTACTTGCAATTACAGCAATGGAGTCTCCAGATCGTTCTGGAATGCTAACCCCACCAATGTATTCCTCAGTTTCAGTCCCATTTCGATGGGAAGAAGAACCTGGCAAGCCCAGGTTTTGTTTCAATTCTCTTAACATTCCCACTCAAACTCAAACTCAAACATATTCCCTTGAACTTCCACCAAGATTGTTACTAATGGATCCCAAAATCTCAAAACTCTCTCCTCCCATCCCCTCTCAGAAAGGGTTTTTCCAGTTTCATAAGCACTGTTGTAGCTCATTCAGATTTGATAAAACTCAGCTTGGAGCTATGGTTTTGAGAAAGAGAGGAGTGTTAATTGAGAAGGAATGGTTTTGTTGGTTGGGAAAATTGAGTTTTAGGAGCAAAGGGGAAGTTGGGTCTGACTATGGTGCTGTATTTCCTTCTTCTTTGGATAAGGAGAAAAGCAGTTCAAGGATGAAAGTTGCTGTGAACCAGAAAGGTGGGAGCTTTTCTTCTTGTTTTGTCCAAGCCAAGACTGAGTTTTGGGTAATTTTAGAATAACCCATCTTCTTCTCTGATTTATACATGCATATTGCATATGTTAACAATCATGATATTTTGAAGTTTATAAACATTTCCTAAGTAAACACGAGGGAAATGAATGTTTTCTTCTAAAAGTCATCACCTGTTCTCCTTGATCATGCAGTTCTGTAATTTTTCAAGCCATTTGTGATTATTAATAAAACTATTACTATTTAAGGAATTGCAGGGAAACATAGGGGAAGGGTTTAAACAGATCAACATTCCATGGAAGAGCAAAAGAGCATAAGAAAGAGGACTGGTAAATCATTAGAATGTTTATGAATAAAACCGAGTTTAGCTTGTTGTAATGTAAATGCATCAAATAATCGTAATATGGAGGAGGACTAATGACTTAGTTAATGACTGAGGTCTTGTGTATTTGATATTCTTGTACAGAAATAATGTTATGAATCATATGGCTTTATGAGTTGAATCATCATTTTTTCCCGAAAATTTTCAAGAAGTGGAAGAAATCCTTTTAATTCCTCGCATGTTTATCCATCTTGACTGTGATGAACATTCAAAACAA

mRNA sequence

ATGAATAAATTATATGGTACTAAGCCAATTGCCACCCCAAATTCTAGTCAGTACATAACAGAGAGAGAGAGAGAGAGAGAGAGAAGGGAGAAAATGGGAAGTGAAGCAAAGCTAAGGCGAGATTATGAAGTACCAAAGCTTCCATTACTTGCAATTACAGCAATGGAGTCTCCAGATCGTTCTGGAATGCTAACCCCACCAATGTATTCCTCAGTTTCAGTCCCATTTCGATGGGAAGAAGAACCTGGCAAGCCCAGGTTTTGTTTCAATTCTCTTAACATTCCCACTCAAACTCAAACTCAAACATATTCCCTTGAACTTCCACCAAGATTGTTACTAATGGATCCCAAAATCTCAAAACTCTCTCCTCCCATCCCCTCTCAGAAAGGGTTTTTCCAGTTTCATAAGCACTGTTGTAGCTCATTCAGATTTGATAAAACTCAGCTTGGAGCTATGGTTTTGAGAAAGAGAGGAGTGTTAATTGAGAAGGAATGGTTTTGTTGGTTGGGAAAATTGAGTTTTAGGAGCAAAGGGGAAGTTGGGTCTGACTATGGTGCTGTATTTCCTTCTTCTTTGGATAAGGAGAAAAGCAGTTCAAGGATGAAAGTTGCTGTGAACCAGAAAGGTGGGAGCTTTTCTTCTTGTTTTGTCCAAGCCAAGACTGAGTTTTGGGGAAACATAGGGGAAGGGTTTAAACAGATCAACATTCCATGGAAGAGCAAAAGAGCATAA

Coding sequence (CDS)

ATGAATAAATTATATGGTACTAAGCCAATTGCCACCCCAAATTCTAGTCAGTACATAACAGAGAGAGAGAGAGAGAGAGAGAGAAGGGAGAAAATGGGAAGTGAAGCAAAGCTAAGGCGAGATTATGAAGTACCAAAGCTTCCATTACTTGCAATTACAGCAATGGAGTCTCCAGATCGTTCTGGAATGCTAACCCCACCAATGTATTCCTCAGTTTCAGTCCCATTTCGATGGGAAGAAGAACCTGGCAAGCCCAGGTTTTGTTTCAATTCTCTTAACATTCCCACTCAAACTCAAACTCAAACATATTCCCTTGAACTTCCACCAAGATTGTTACTAATGGATCCCAAAATCTCAAAACTCTCTCCTCCCATCCCCTCTCAGAAAGGGTTTTTCCAGTTTCATAAGCACTGTTGTAGCTCATTCAGATTTGATAAAACTCAGCTTGGAGCTATGGTTTTGAGAAAGAGAGGAGTGTTAATTGAGAAGGAATGGTTTTGTTGGTTGGGAAAATTGAGTTTTAGGAGCAAAGGGGAAGTTGGGTCTGACTATGGTGCTGTATTTCCTTCTTCTTTGGATAAGGAGAAAAGCAGTTCAAGGATGAAAGTTGCTGTGAACCAGAAAGGTGGGAGCTTTTCTTCTTGTTTTGTCCAAGCCAAGACTGAGTTTTGGGGAAACATAGGGGAAGGGTTTAAACAGATCAACATTCCATGGAAGAGCAAAAGAGCATAA

Protein sequence

MNKLYGTKPIATPNSSQYITERERERERREKMGSEAKLRRDYEVPKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQKGGSFSSCFVQAKTEFWGNIGEGFKQINIPWKSKRA*

Homology

[Close]

BLAST of Csa3G119480.2 vs. TrEMBL
Match: A0A0A0L338_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119480 PE=4 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 2.4e-137
Identity = 243/246 (98.78%), Postives = 243/246 (98.78%), Query Frame = 1


Query: 1   MNKLYGTKPIATPNSSQYITERERERERREKMGSEAKLRRDYEVPKLPLLAITAMESPDR 60
           MNKLYGTKPIATPNSSQYITERERERERREKMGSEAKLRRDYEVPKLPLLAITAMESPDR
Sbjct: 1   MNKLYGTKPIATPNSSQYITERERERERREKMGSEAKLRRDYEVPKLPLLAITAMESPDR 60

Query: 61  SGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISK 120
           SGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISK
Sbjct: 61  SGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISK 120

Query: 121 LSPPIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEV 180
           LSPPIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEV
Sbjct: 121 LSPPIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEV 180

Query: 181 GSDYGAVFPSSLDKEKSSSRMKVAVNQKGGSFSSCFVQAKTEFW---GNIGEGFKQINIP 240
           GSDYGAVFPSSLDKEKSSSRMKVAVNQKGGSFSSCFVQAKTEFW   GNIGEGFKQINIP
Sbjct: 181 GSDYGAVFPSSLDKEKSSSRMKVAVNQKGGSFSSCFVQAKTEFWELQGNIGEGFKQINIP 240

Query: 241 WKSKRA 244
           WKSKRA
Sbjct: 241 WKSKRA 246

[Close]

BLAST of Csa3G119480.2 vs. TrEMBL
Match: A0A068UKB7_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00027699001 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.3e-29
Identity = 91/228 (39.91%), Postives = 127/228 (55.70%), Query Frame = 1


Query: 45  PKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQT-Y 104
           PKLPL ++  ++SP+ SGMLTPP+Y+S SVPFRWEEEPGKPR C   + +PT T T++  
Sbjct: 9   PKLPLFSMATVQSPEHSGMLTPPLYTSASVPFRWEEEPGKPRPCTALITLPTSTTTESPR 68

Query: 105 SLELPPRLLLMDPKISKLSPPIPSQKGFFQF--HKHCCSSFRF----------------D 164
            L+LPPRL L   KI+K   P    +G +     K   SSFRF                +
Sbjct: 69  CLDLPPRLFLEPSKITKTPSPTTVLEGPYVLGRPKFTSSSFRFFRERQGSFDSSSSKSPE 128

Query: 165 KTQLGAMVLRKRGVLIEKEWFCWLGKL-SFRS-KGEVGSDYGAVFPSSLDKEKSSS---- 224
           + QL +MVL K+       +  W  K   FRS K E G     V PSS+  + + +    
Sbjct: 129 RGQLSSMVLGKKLHKGRGLFGSWRQKTPKFRSGKREAGGSCSFVHPSSVSVDGADTGSDD 188

Query: 225 ----RMKVAVNQKGGSFSSCFVQAKTEFWGNIGEGFKQINIPWKSKRA 244
               R+K+   ++ GSFSS   QAK++FW  + EGFK + +PWKS+++
Sbjct: 189 GNIPRVKIGRIRRNGSFSS-LSQAKSQFWAAVYEGFKHV-LPWKSRKS 234

[Close]

BLAST of Csa3G119480.2 vs. TrEMBL
Match: B9SBF5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0716950 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 6.3e-29
Identity = 97/239 (40.59%), Postives = 128/239 (53.56%), Query Frame = 1


Query: 32  MGSEAKLRRDYEVPKLPL-LAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFN 91
           MGSEA+   D   P+LPL L    ++SP RSGMLTPP+YSS +VPFRWEEEPGKPR C  
Sbjct: 1   MGSEAEAE-DSSTPRLPLFLKPPYVQSPQRSGMLTPPLYSSAAVPFRWEEEPGKPRECSG 60

Query: 92  SLNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQKG-------------FFQFHKH 151
           ++  PT    +   LELPPRLLL +  +SKL  P     G             F    + 
Sbjct: 61  AITTPTDLSPK--CLELPPRLLL-EANVSKLPSPTTVLDGPYTGRSSRFQSSSFRMIRRE 120

Query: 152 CCSSFRF---DKTQLGAMVLRKRGVLIEKEWFCW-LGKLSFRSKGEV-GSDYGAVFPSSL 211
           C  SFR    ++ Q  A+VL KRG+        W  G+  F+ K EV G+ Y  VFPSS 
Sbjct: 121 CYGSFRTCSPERDQFTALVLSKRGIKDRGFLGSWRWGRRGFKGKREVAGASY--VFPSSS 180

Query: 212 -----------DKEKSSSRMKVAVNQKGGSFSSCFVQAKTEFWGNIGEGFKQINIPWKS 241
                      +KE SS  + +   ++ GSFS+    +++ FW  I EG KQ+ +PW+S
Sbjct: 181 MDREVEDGNEEEKEISSKNVTITRIRRSGSFST---SSRSHFWATIYEGLKQV-VPWRS 229

[Close]

BLAST of Csa3G119480.2 vs. TrEMBL
Match: A0A0D2QJ14_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G153800 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 7.7e-27
Identity = 87/233 (37.34%), Postives = 118/233 (50.64%), Query Frame = 1


Query: 32  MGSEAKLRRDYEVPKLPLLAITA--MESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCF 91
           MG+EA+    Y  PKLPL +     M+SP+RSG  TPP++ S SVPFRWE+EPGKP+ C 
Sbjct: 1   MGTEAENESSY-TPKLPLFSAPQAHMQSPERSGTSTPPLHVSASVPFRWEDEPGKPKPCT 60

Query: 92  NSLNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQKGFFQFHKHCCSSFRF----- 151
                          LELPPRLL      + L P        F+    C  SFR      
Sbjct: 61  TLTLFSNPNHLAQKCLELPPRLLQDAKSTTVLEPARLQSSSSFRMGSECYGSFRVGSVSP 120

Query: 152 DKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEV-GSDYGAVFPSSLDK--------- 211
           ++ QLG MVL KRG   +K +     + +F++K EV G+    VFPSS DK         
Sbjct: 121 ERVQLGTMVLSKRGTYKDKGFLGSWKRKTFKAKREVGGAGKSYVFPSSGDKDSECSREEE 180

Query: 212 -----EKSSSRMKVAVNQKGGSFSSCFVQAKTEFWGNIGEGFKQINIPWKSKR 243
                E +SS +K    ++ GSF + F  +K+ FW  I +G K + +PW  K+
Sbjct: 181 EEEEEESNSSSVKTTRIKRVGSFHNLF-NSKSHFWATIYQGLK-LAVPWNKKK 230

[Close]

BLAST of Csa3G119480.2 vs. TrEMBL
Match: A0A0B0MN05_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_21896 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.9e-26
Identity = 85/228 (37.28%), Postives = 117/228 (51.32%), Query Frame = 1


Query: 32  MGSEAKLRRDYEVPKLPLLAITA--MESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCF 91
           MG+EA+    Y  PKLPL +     M+SP+RSG  TPP++ S SVPFRWE+EPGKP+ C 
Sbjct: 1   MGTEAEQESSY-TPKLPLFSAPQAHMQSPERSGTSTPPLHVSASVPFRWEDEPGKPKPCT 60

Query: 92  NSLNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQKGFFQFHKHCCSSFRF----- 151
                          LELPPRLL      + L P        F+    C  SFR      
Sbjct: 61  TLTLFSNPNHLAQKCLELPPRLLQDAKSTTVLEPARLQSSSSFRMGSECYGSFRVGSVSP 120

Query: 152 DKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGE-VGSDYGAVFPSSLDK--------- 211
           ++ QLG +VL KRG   +K +     + +F++K E  G+    VFPSS DK         
Sbjct: 121 ERVQLGTVVLSKRGTYKDKGFLGSWKRKTFKAKREGGGAGKSYVFPSSGDKDSECSREEE 180

Query: 212 -EKSSSRMKVAVNQKGGSFSSCFVQAKTEFWGNIGEGFKQINIPWKSK 242
            E +SS +K+   ++ GSF + F  +K+ FW  I +G K + +PW  K
Sbjct: 181 EESNSSSVKITRIKRVGSFHNLF-NSKSHFWATIYQGLK-LAVPWNKK 225

[Close]

BLAST of Csa3G119480.2 vs. TAIR10
Match: AT5G53030.1 (AT5G53030.1 unknown protein)

HSP 1 Score: 58.5 bits (140), Expect = 6.5e-09
Identity = 63/208 (30.29%), Postives = 86/208 (41.35%), Query Frame = 1


Query: 62  GMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISKL 121
           G+ TPP+  + SVPF WEE PGKPR       +  +   +  SLELPPRL+L     +  
Sbjct: 36  GLATPPVNIAGSVPFLWEEAPGKPRRVKKPARLNQKGVVR--SLELPPRLVLPGESTTVN 95

Query: 122 SP-PIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRK-RGV---LIEKEWFCWLGKLSFRS 181
            P P     G +   +   S  R       A V+RK RGV     EKE     G   + S
Sbjct: 96  EPSPTTVLDGPYDLRRRSLSLPR------SAAVIRKLRGVPAPAPEKEERLVGGSSRWGS 155

Query: 182 KGEVGSDYGAVFPSSLDKE------------------KSSSRMKVAVNQKGGSFSSCFVQ 241
            G        +F  S  ++                     +++K+    K GSF +    
Sbjct: 156 FGNCKEVSEGIFDFSRFRDDGYDCRRDWAGGGGVGNFAGDAKVKLYRIIKKGSFFNLSHT 215

Query: 242 AKTEFW----GNIGEGFKQINIPWKSKR 243
            K++FW      + EGFKQ+ IPWK K+
Sbjct: 216 TKSDFWLKMQARVYEGFKQV-IPWKRKQ 234

[Close]

BLAST of Csa3G119480.2 vs. TAIR10
Match: AT2G46535.1 (AT2G46535.1 unknown protein)

HSP 1 Score: 55.8 bits (133), Expect = 4.2e-08
Identity = 53/214 (24.77%), Postives = 86/214 (40.19%), Query Frame = 1


Query: 38  LRRDYEVPKLPLLAITAMES--------PDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCF 97
           +R D E  K  L  + A +S        P    +   P+++  SVPF WE++PGKP+   
Sbjct: 1   MRGDKEEEKAKLALVLAAKSRSLLYTSSPASPRVFASPIHTLASVPFCWEDQPGKPKHPL 60

Query: 98  NSLNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQK-GFFQFHKHCCSSFRFDKTQ 157
             L+ P         L+LPPRLLL          P+P +K G  +F +            
Sbjct: 61  RPLSYPK-------CLDLPPRLLLPG---EFTQMPLPERKHGLLRFLRR----------- 120

Query: 158 LGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQK 217
                 + RG ++ +      G   F S+ +   D             + + MK+    +
Sbjct: 121 ------KGRGDVVVR------GNYVFLSENQRAGD-----------NINENNMKIMKFNR 169

Query: 218 GGSFSSCFVQAKTEFWGNIGEGFKQINIPWKSKR 243
            GS+        + FWG++ +G K + +PWK+K+
Sbjct: 181 SGSYHGGGSVKGSHFWGSLCKGLK-LAMPWKNKK 169

[Close]

BLAST of Csa3G119480.2 vs. TAIR10
Match: AT4G27810.1 (AT4G27810.1 unknown protein)

HSP 1 Score: 53.9 bits (128), Expect = 1.6e-07
Identity = 30/74 (40.54%), Postives = 38/74 (51.35%), Query Frame = 1


Query: 45  PKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQ--- 104
           PKLPL +I    + D  G+ TPP+  + SVPF WEE PGKPR    +  + ++   +   
Sbjct: 15  PKLPLFSIPFNRACDTPGLATPPVNIAGSVPFLWEEAPGKPRVSDENKPLASKQNEREGG 74

Query: 105 ----TYSLELPPRL 112
                  LELPPRL
Sbjct: 75  GGGVVRCLELPPRL 88

[Close]

BLAST of Csa3G119480.2 vs. TAIR10
Match: AT4G00950.1 (AT4G00950.1 Protein of unknown function (DUF688))

HSP 1 Score: 48.5 bits (114), Expect = 6.7e-06
Identity = 37/106 (34.91%), Postives = 52/106 (49.06%), Query Frame = 1


Query: 35  EAKLRRDYEVPKLPLLAITAMESPDRSGMLTPPMYSSV--SVPFRWEEEPGKPRFCFNSL 94
           E +   +  V KLP+L     +    S  ++ P++SS+  SVPF WEEEPGKP+    S 
Sbjct: 6   ETEQEGNLTVMKLPVLPT---KPNTHSHSMSSPIHSSISASVPFSWEEEPGKPKQHSTSS 65

Query: 95  NIPTQTQTQT----------YSLELPPRLLLMDP---KISKLSPPI 126
           +  + +   T           SLELPPRL L++     ++KL  PI
Sbjct: 66  SSSSSSSPLTSYSSSPFETHKSLELPPRLHLLEKDGGSVTKLHSPI 108

[Close]

BLAST of Csa3G119480.2 vs. NCBI nr
Match: gi|778676857|ref|XP_004133807.2| (PREDICTED: uncharacterized protein At4g00950 isoform X2 [Cucumis sativus])

HSP 1 Score: 501.5 bits (1290), Expect = 8.2e-139
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 1


Query: 1   MNKLYGTKPIATPNSSQYITERERERERREKMGSEAKLRRDYEVPKLPLLAITAMESPDR 60
           MNKLYGTKPIATPNSSQYITERERERERREKMGSEAKLRRDYEVPKLPLLAITAMESPDR
Sbjct: 1   MNKLYGTKPIATPNSSQYITERERERERREKMGSEAKLRRDYEVPKLPLLAITAMESPDR 60

Query: 61  SGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISK 120
           SGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISK
Sbjct: 61  SGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISK 120

Query: 121 LSPPIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEV 180
           LSPPIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEV
Sbjct: 121 LSPPIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEV 180

Query: 181 GSDYGAVFPSSLDKEKSSSRMKVAVNQKGGSFSSCFVQAKTEFWGNIGEGFKQINIPWKS 240
           GSDYGAVFPSSLDKEKSSSRMKVAVNQKGGSFSSCFVQAKTEFWGNIGEGFKQINIPWKS
Sbjct: 181 GSDYGAVFPSSLDKEKSSSRMKVAVNQKGGSFSSCFVQAKTEFWGNIGEGFKQINIPWKS 240

Query: 241 KRA 244
           KRA
Sbjct: 241 KRA 243

[Close]

BLAST of Csa3G119480.2 vs. NCBI nr
Match: gi|778676854|ref|XP_011650674.1| (PREDICTED: uncharacterized protein At4g00950 isoform X1 [Cucumis sativus])

HSP 1 Score: 496.1 bits (1276), Expect = 3.4e-137
Identity = 243/246 (98.78%), Postives = 243/246 (98.78%), Query Frame = 1


Query: 1   MNKLYGTKPIATPNSSQYITERERERERREKMGSEAKLRRDYEVPKLPLLAITAMESPDR 60
           MNKLYGTKPIATPNSSQYITERERERERREKMGSEAKLRRDYEVPKLPLLAITAMESPDR
Sbjct: 1   MNKLYGTKPIATPNSSQYITERERERERREKMGSEAKLRRDYEVPKLPLLAITAMESPDR 60

Query: 61  SGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISK 120
           SGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISK
Sbjct: 61  SGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISK 120

Query: 121 LSPPIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEV 180
           LSPPIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEV
Sbjct: 121 LSPPIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEV 180

Query: 181 GSDYGAVFPSSLDKEKSSSRMKVAVNQKGGSFSSCFVQAKTEFW---GNIGEGFKQINIP 240
           GSDYGAVFPSSLDKEKSSSRMKVAVNQKGGSFSSCFVQAKTEFW   GNIGEGFKQINIP
Sbjct: 181 GSDYGAVFPSSLDKEKSSSRMKVAVNQKGGSFSSCFVQAKTEFWELQGNIGEGFKQINIP 240

Query: 241 WKSKRA 244
           WKSKRA
Sbjct: 241 WKSKRA 246

[Close]

BLAST of Csa3G119480.2 vs. NCBI nr
Match: gi|778676863|ref|XP_011650676.1| (PREDICTED: uncharacterized protein At4g00950 isoform X4 [Cucumis sativus])

HSP 1 Score: 429.1 bits (1102), Expect = 5.2e-117
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 1


Query: 1   MNKLYGTKPIATPNSSQYITERERERERREKMGSEAKLRRDYEVPKLPLLAITAMESPDR 60
           MNKLYGTKPIATPNSSQYITERERERERREKMGSEAKLRRDYEVPKLPLLAITAMESPDR
Sbjct: 1   MNKLYGTKPIATPNSSQYITERERERERREKMGSEAKLRRDYEVPKLPLLAITAMESPDR 60

Query: 61  SGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISK 120
           SGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISK
Sbjct: 61  SGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISK 120

Query: 121 LSPPIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEV 180
           LSPPIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEV
Sbjct: 121 LSPPIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEV 180

Query: 181 GSDYGAVFPSSLDKEKSSSRMKVAVNQKG 210
           GSDYGAVFPSSLDKEKSSSRMKVAVNQKG
Sbjct: 181 GSDYGAVFPSSLDKEKSSSRMKVAVNQKG 209

[Close]

BLAST of Csa3G119480.2 vs. NCBI nr
Match: gi|778676860|ref|XP_011650675.1| (PREDICTED: uncharacterized protein At4g00950 isoform X3 [Cucumis sativus])

HSP 1 Score: 429.1 bits (1102), Expect = 5.2e-117
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 1


Query: 1   MNKLYGTKPIATPNSSQYITERERERERREKMGSEAKLRRDYEVPKLPLLAITAMESPDR 60
           MNKLYGTKPIATPNSSQYITERERERERREKMGSEAKLRRDYEVPKLPLLAITAMESPDR
Sbjct: 1   MNKLYGTKPIATPNSSQYITERERERERREKMGSEAKLRRDYEVPKLPLLAITAMESPDR 60

Query: 61  SGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISK 120
           SGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISK
Sbjct: 61  SGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISK 120

Query: 121 LSPPIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEV 180
           LSPPIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEV
Sbjct: 121 LSPPIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEV 180

Query: 181 GSDYGAVFPSSLDKEKSSSRMKVAVNQKG 210
           GSDYGAVFPSSLDKEKSSSRMKVAVNQKG
Sbjct: 181 GSDYGAVFPSSLDKEKSSSRMKVAVNQKG 209

[Close]

BLAST of Csa3G119480.2 vs. NCBI nr
Match: gi|645254628|ref|XP_008233126.1| (PREDICTED: uncharacterized protein At4g00950 [Prunus mume])

HSP 1 Score: 146.4 bits (368), Expect = 6.7e-32
Identity = 97/238 (40.76%), Postives = 131/238 (55.04%), Query Frame = 1


Query: 21  ERERERERREKMGSEAKLRRDYEVPKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEE 80
           +R       E MGSEA++    E  +LPL ++  ++S + SG LTPP+Y+SVSVPFRWEE
Sbjct: 6   QRSATERSLEAMGSEAEVEE--ETLQLPLFSVPQIQSLEPSGSLTPPLYTSVSVPFRWEE 65

Query: 81  EPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISK---LSPPIPSQKGF----FQ 140
           EPGKPR C   + +P  T      LELPPRLLL   + S    L  P   +  F    F+
Sbjct: 66  EPGKPRPCTALITLPNPTDFSQKCLELPPRLLLETKQPSPTTVLEGPYVGRSKFQSSSFR 125

Query: 141 FHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEVGSDYGAVFPSSLD 200
               C  +F  ++ QLGA+VL KRG L EK WF   G+   + K EVG     VFPSS+D
Sbjct: 126 MGMECYGAFSPERGQLGAVVLSKRG-LKEKGWFDSWGRRILKGKREVGG-ASYVFPSSVD 185

Query: 201 KE---------KSSSRMKVAVNQKGGSFSSCFVQAKTEFWGNIGEGFKQINIPWKSKR 243
            E          +S ++K    ++ GS SS    A+ +FW  I +G KQ  +PWKS++
Sbjct: 186 GESDGSSVGESSTSRKVKTTRIRRAGSLSS-LSHARPDFWTTIYQGLKQA-VPWKSRK 237

The following BLAST results are available for this feature:

BLAST of Csa3G119480.2 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L338_CUCSA	2.4e-137	98.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119480 PE=4 SV=1	[more]
A0A068UKB7_COFCA	1.3e-29	39.91	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00027699001 PE=4 SV=1	[more]
B9SBF5_RICCO	6.3e-29	40.59	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0716950 PE=4 SV=1	[more]
A0A0D2QJ14_GOSRA	7.7e-27	37.34	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G153800 PE=4 SV=1	[more]
A0A0B0MN05_GOSAR	2.9e-26	37.28	Uncharacterized protein OS=Gossypium arboreum GN=F383_21896 PE=4 SV=1	[more]

BLAST of Csa3G119480.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G53030.1	6.5e-09	30.29	unknown protein	[more]
AT2G46535.1	4.2e-08	24.77	unknown protein	[more]
AT4G27810.1	1.6e-07	40.54	unknown protein	[more]
AT4G00950.1	6.7e-06	34.91	Protein of unknown function (DUF688)	[more]

BLAST of Csa3G119480.2 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778676857\|ref\|XP_004133807.2\|	8.2e-139	100.00	PREDICTED: uncharacterized protein At4g00950 isoform X2 [Cucumis sativus]	[more]
gi\|778676854\|ref\|XP_011650674.1\|	3.4e-137	98.78	PREDICTED: uncharacterized protein At4g00950 isoform X1 [Cucumis sativus]	[more]
gi\|778676863\|ref\|XP_011650676.1\|	5.2e-117	100.00	PREDICTED: uncharacterized protein At4g00950 isoform X4 [Cucumis sativus]	[more]
gi\|778676860\|ref\|XP_011650675.1\|	5.2e-117	100.00	PREDICTED: uncharacterized protein At4g00950 isoform X3 [Cucumis sativus]	[more]
gi\|645254628\|ref\|XP_008233126.1\|	6.7e-32	40.76	PREDICTED: uncharacterized protein At4g00950 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa3G119480	Csa3G119480	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa3G119480.2	Csa3G119480.2-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa3G119480.2.utr3p1	Csa3G119480.2.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa3G119480.2.cds2	Csa3G119480.2.cds2	CDS
Csa3G119480.2.cds1	Csa3G119480.2.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa3G119480.2.utr5p1	Csa3G119480.2.utr5p1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34371	FAMILY NOT NAMED	coord: 1..242 score: 1.1
None	No IPR available	PANTHER	PTHR34371:SF2	SUBFAMILY NOT NAMED	coord: 1..242 score: 1.1