CU150513 (transcribed_cluster) Cucumber (Chinese Long) v2

Overview
NameCU150513
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 6720444 .. 6720562 (+)
Sequence length119
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

ATTCCTTCTCAATTAACACTCCTCTCTTTTCTTCAAAACCATAGCTCCAAGCTGAGTTTTATCAAATCTGAATGAGCTACAACAGTGCTTATGAAACTGGAAAAACCCTTTTGAGAGGG
Library
Library categoryESTs
gynoecious flower library1
Homology
[Close]
BLAST of CU150513 vs. TrEMBL
Match: A0A0A0L338_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119480 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.7e-08
Identity = 28/29 (96.55%), Postives = 29/29 (100.00%), Query Frame = -3 

Query: 25  KGFFQFHKHCCSSFRFDKTQLGAMVLKKR 84
           KGFFQFHKHCCSSFRFDKTQLGAMVL+KR
Sbjct: 129 KGFFQFHKHCCSSFRFDKTQLGAMVLRKR 157

Query: 85   112
           
Sbjct: 189  157

[Close]
BLAST of CU150513 vs. NCBI nr
Match: gi|778676857|ref|XP_004133807.2| (PREDICTED: uncharacterized protein At4g00950 isoform X2 [Cucumis sativus])

HSP 1 Score: 65.5 bits (158), Expect = 2.4e-08
Identity = 28/29 (96.55%), Postives = 29/29 (100.00%), Query Frame = -3 

Query: 25  KGFFQFHKHCCSSFRFDKTQLGAMVLKKR 84
           KGFFQFHKHCCSSFRFDKTQLGAMVL+KR
Sbjct: 129 KGFFQFHKHCCSSFRFDKTQLGAMVLRKR 157

Query: 85   112
           
Sbjct: 189  157

[Close]
BLAST of CU150513 vs. NCBI nr
Match: gi|778676854|ref|XP_011650674.1| (PREDICTED: uncharacterized protein At4g00950 isoform X1 [Cucumis sativus])

HSP 1 Score: 65.5 bits (158), Expect = 2.4e-08
Identity = 28/29 (96.55%), Postives = 29/29 (100.00%), Query Frame = -3 

Query: 25  KGFFQFHKHCCSSFRFDKTQLGAMVLKKR 84
           KGFFQFHKHCCSSFRFDKTQLGAMVL+KR
Sbjct: 129 KGFFQFHKHCCSSFRFDKTQLGAMVLRKR 157

Query: 85   112
           
Sbjct: 189  157

[Close]
BLAST of CU150513 vs. NCBI nr
Match: gi|778676860|ref|XP_011650675.1| (PREDICTED: uncharacterized protein At4g00950 isoform X3 [Cucumis sativus])

HSP 1 Score: 65.5 bits (158), Expect = 2.4e-08
Identity = 28/29 (96.55%), Postives = 29/29 (100.00%), Query Frame = -3 

Query: 25  KGFFQFHKHCCSSFRFDKTQLGAMVLKKR 84
           KGFFQFHKHCCSSFRFDKTQLGAMVL+KR
Sbjct: 129 KGFFQFHKHCCSSFRFDKTQLGAMVLRKR 157

Query: 85   112
           
Sbjct: 189  157

[Close]
BLAST of CU150513 vs. NCBI nr
Match: gi|778676863|ref|XP_011650676.1| (PREDICTED: uncharacterized protein At4g00950 isoform X4 [Cucumis sativus])

HSP 1 Score: 65.5 bits (158), Expect = 2.4e-08
Identity = 28/29 (96.55%), Postives = 29/29 (100.00%), Query Frame = -3 

Query: 25  KGFFQFHKHCCSSFRFDKTQLGAMVLKKR 84
           KGFFQFHKHCCSSFRFDKTQLGAMVL+KR
Sbjct: 129 KGFFQFHKHCCSSFRFDKTQLGAMVLRKR 157

Query: 85   112
           
Sbjct: 189  157

The following BLAST results are available for this feature:
BLAST of CU150513 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L338_CUCSA1.7e-0896.55Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119480 PE=4 SV=1[more]
BLAST of CU150513 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778676857|ref|XP_004133807.2|2.4e-0896.55PREDICTED: uncharacterized protein At4g00950 isoform X2 [Cucumis sativus][more]
gi|778676854|ref|XP_011650674.1|2.4e-0896.55PREDICTED: uncharacterized protein At4g00950 isoform X1 [Cucumis sativus][more]
gi|778676860|ref|XP_011650675.1|2.4e-0896.55PREDICTED: uncharacterized protein At4g00950 isoform X3 [Cucumis sativus][more]
gi|778676863|ref|XP_011650676.1|2.4e-0896.55PREDICTED: uncharacterized protein At4g00950 isoform X4 [Cucumis sativus][more]
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa3G119480Csa3G119480gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0176701G0176701EST