CsGy3G007980 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G007980
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	DUF688 family protein
Location	Chr3 : 6749497 .. 6750090 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGTGAAGCAAAGCTAAGGCGAGATTATGAAGTACCAAAGCTTCCATTACTTGCAATTACAGCAATGGAGTCTCCAGATCGTTCTGGAATGCTAACCCCACCAATGTATTCCTCAGTTTCAGTCCCATTTCGATGGGAAGAAGAACCTGGCAAGCCCAGGTTTTGTTTCAATTCTCTTAACATTCCCACTCAAACTCAAACTCAAACATATTCCCTTGAACTTCCACCAAGATTGTTACTAATGGATCCCAAAATCTCAAAACTCTCTCCTCCCATCCCCTCTCAGAAAGGGTTTTTCCAGTTTCATAAGCACTGTTGTAGCTCATTCAGATTTGATAAAACTCAGCTTGGAGCTATGGTTTTGAGAAAGAGAGGAGTGTTAATTGAGAAGGAATGGTTTTGTTGGTTGGGAAAATTGAGTTTTAGGAGCAAAGGGGAAGTTGGGTCTGACTATGGTGCTGTATTTCCTTCTTCTTTGGATAAGGAGAAAAGCAGTTCAAGGATGAAAGTTGCTGTGAACCAGAAAGGTGGGAGCTTTTCTTCTTGTTTTGTCCAAGCCAAGACTGAGTTTTGGGTAATTTTAGAATAA

mRNA sequence

ATGGGAAGTGAAGCAAAGCTAAGGCGAGATTATGAAGTACCAAAGCTTCCATTACTTGCAATTACAGCAATGGAGTCTCCAGATCGTTCTGGAATGCTAACCCCACCAATGTATTCCTCAGTTTCAGTCCCATTTCGATGGGAAGAAGAACCTGGCAAGCCCAGGTTTTGTTTCAATTCTCTTAACATTCCCACTCAAACTCAAACTCAAACATATTCCCTTGAACTTCCACCAAGATTGTTACTAATGGATCCCAAAATCTCAAAACTCTCTCCTCCCATCCCCTCTCAGAAAGGGTTTTTCCAGTTTCATAAGCACTGTTGTAGCTCATTCAGATTTGATAAAACTCAGCTTGGAGCTATGGTTTTGAGAAAGAGAGGAGTGTTAATTGAGAAGGAATGGTTTTGTTGGTTGGGAAAATTGAGTTTTAGGAGCAAAGGGGAAGTTGGGTCTGACTATGGTGCTGTATTTCCTTCTTCTTTGGATAAGGAGAAAAGCAGTTCAAGGATGAAAGTTGCTGTGAACCAGAAAGGTGGGAGCTTTTCTTCTTGTTTTGTCCAAGCCAAGACTGAGTTTTGGGTAATTTTAGAATAA

Coding sequence (CDS)

ATGGGAAGTGAAGCAAAGCTAAGGCGAGATTATGAAGTACCAAAGCTTCCATTACTTGCAATTACAGCAATGGAGTCTCCAGATCGTTCTGGAATGCTAACCCCACCAATGTATTCCTCAGTTTCAGTCCCATTTCGATGGGAAGAAGAACCTGGCAAGCCCAGGTTTTGTTTCAATTCTCTTAACATTCCCACTCAAACTCAAACTCAAACATATTCCCTTGAACTTCCACCAAGATTGTTACTAATGGATCCCAAAATCTCAAAACTCTCTCCTCCCATCCCCTCTCAGAAAGGGTTTTTCCAGTTTCATAAGCACTGTTGTAGCTCATTCAGATTTGATAAAACTCAGCTTGGAGCTATGGTTTTGAGAAAGAGAGGAGTGTTAATTGAGAAGGAATGGTTTTGTTGGTTGGGAAAATTGAGTTTTAGGAGCAAAGGGGAAGTTGGGTCTGACTATGGTGCTGTATTTCCTTCTTCTTTGGATAAGGAGAAAAGCAGTTCAAGGATGAAAGTTGCTGTGAACCAGAAAGGTGGGAGCTTTTCTTCTTGTTTTGTCCAAGCCAAGACTGAGTTTTGGGTAATTTTAGAATAA

Protein sequence

MGSEAKLRRDYEVPKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQKGFFQFHKHCCSSFRFDKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQKGGSFSSCFVQAKTEFWVILE

Homology

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BLAST of CsGy3G007980 vs. NCBI nr
Match: XP_011650674.1 (PREDICTED: uncharacterized protein At4g00950 isoform X1 [Cucumis sativus] >KGN56415.1 hypothetical protein Csa_3G119480 [Cucumis sativus])

HSP 1 Score: 399.8 bits (1026), Expect = 5.3e-108
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MGSEAKLRRDYEVPKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFNS 60
           MGSEAKLRRDYEVPKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFNS
Sbjct: 32  MGSEAKLRRDYEVPKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFNS 91

Query: 61  LNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQKGFFQFHKHCCSSFRFDKTQLGA 120
           LNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQKGFFQFHKHCCSSFRFDKTQLGA
Sbjct: 92  LNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQKGFFQFHKHCCSSFRFDKTQLGA 151

Query: 121 MVLRKRGVLIEKEWFCWLGKLSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQKGGS 180
           MVLRKRGVLIEKEWFCWLGKLSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQKGGS
Sbjct: 152 MVLRKRGVLIEKEWFCWLGKLSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQKGGS 211

Query: 181 FSSCFVQAKTEFW 194
           FSSCFVQAKTEFW
Sbjct: 212 FSSCFVQAKTEFW 224

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BLAST of CsGy3G007980 vs. NCBI nr
Match: XP_004133807.2 (PREDICTED: uncharacterized protein At4g00950 isoform X2 [Cucumis sativus])

HSP 1 Score: 399.8 bits (1026), Expect = 5.3e-108
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MGSEAKLRRDYEVPKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFNS 60
           MGSEAKLRRDYEVPKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFNS
Sbjct: 32  MGSEAKLRRDYEVPKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFNS 91

Query: 61  LNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQKGFFQFHKHCCSSFRFDKTQLGA 120
           LNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQKGFFQFHKHCCSSFRFDKTQLGA
Sbjct: 92  LNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQKGFFQFHKHCCSSFRFDKTQLGA 151

Query: 121 MVLRKRGVLIEKEWFCWLGKLSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQKGGS 180
           MVLRKRGVLIEKEWFCWLGKLSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQKGGS
Sbjct: 152 MVLRKRGVLIEKEWFCWLGKLSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQKGGS 211

Query: 181 FSSCFVQAKTEFW 194
           FSSCFVQAKTEFW
Sbjct: 212 FSSCFVQAKTEFW 224

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BLAST of CsGy3G007980 vs. NCBI nr
Match: XP_011650675.1 (PREDICTED: uncharacterized protein At4g00950 isoform X3 [Cucumis sativus])

HSP 1 Score: 367.5 bits (942), Expect = 2.9e-98
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MGSEAKLRRDYEVPKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFNS 60
           MGSEAKLRRDYEVPKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFNS
Sbjct: 32  MGSEAKLRRDYEVPKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFNS 91

Query: 61  LNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQKGFFQFHKHCCSSFRFDKTQLGA 120
           LNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQKGFFQFHKHCCSSFRFDKTQLGA
Sbjct: 92  LNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQKGFFQFHKHCCSSFRFDKTQLGA 151

Query: 121 MVLRKRGVLIEKEWFCWLGKLSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQKG 179
           MVLRKRGVLIEKEWFCWLGKLSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQKG
Sbjct: 152 MVLRKRGVLIEKEWFCWLGKLSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQKG 209

[Close]

BLAST of CsGy3G007980 vs. NCBI nr
Match: XP_011650676.1 (PREDICTED: uncharacterized protein At4g00950 isoform X4 [Cucumis sativus])

HSP 1 Score: 367.5 bits (942), Expect = 2.9e-98
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MGSEAKLRRDYEVPKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFNS 60
           MGSEAKLRRDYEVPKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFNS
Sbjct: 32  MGSEAKLRRDYEVPKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFNS 91

Query: 61  LNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQKGFFQFHKHCCSSFRFDKTQLGA 120
           LNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQKGFFQFHKHCCSSFRFDKTQLGA
Sbjct: 92  LNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQKGFFQFHKHCCSSFRFDKTQLGA 151

Query: 121 MVLRKRGVLIEKEWFCWLGKLSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQKG 179
           MVLRKRGVLIEKEWFCWLGKLSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQKG
Sbjct: 152 MVLRKRGVLIEKEWFCWLGKLSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQKG 209

[Close]

BLAST of CsGy3G007980 vs. NCBI nr
Match: XP_023527385.1 (uncharacterized protein At4g00950-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 299.3 bits (765), Expect = 9.7e-78
Identity = 151/201 (75.12%), Postives = 167/201 (83.08%), Query Frame = 0


Query: 1   MGSEAKLRRDYEVPKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFNS 60
           MGSEAKL R+ EVPKLPLLA+ AMESPDRSGMLTPP+++SVSVPFRWEEEPGKPRFCF +
Sbjct: 1   MGSEAKLWRNSEVPKLPLLAVAAMESPDRSGMLTPPIHTSVSVPFRWEEEPGKPRFCFRT 60

Query: 61  LNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQKGFFQFHKHCCSSFRFDKTQLGA 120
            +  + + TQT  LELPPRLLL+DPKISKL PPIP+ KG FQF K  C SFR+DKTQLGA
Sbjct: 61  PS--SSSATQTKCLELPPRLLLLDPKISKLPPPIPAHKGIFQFPKQSCGSFRYDKTQLGA 120

Query: 121 MVLRKRGVLIEKEWFCWLGKLSFRSKGEVGSDYGAVFPSSLDK--------EKSSSRMKV 180
           MVLRKRGVLIEKEWFCWLGKLSF  KGEVGS YG+VFPSSL+K        E+SSS MKV
Sbjct: 121 MVLRKRGVLIEKEWFCWLGKLSFGRKGEVGSAYGSVFPSSLEKENEDAVVAERSSSGMKV 180

Query: 181 AVNQKGGSFSSCFVQAKTEFW 194
           A  QK GSFSSC V+AKTEFW
Sbjct: 181 AETQKEGSFSSCLVKAKTEFW 199

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BLAST of CsGy3G007980 vs. TAIR10
Match: AT4G27810.1 (unknown protein)

HSP 1 Score: 53.5 bits (127), Expect = 1.7e-07
Identity = 30/74 (40.54%), Postives = 40/74 (54.05%), Query Frame = 0


Query: 14 PKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQ--- 73
          PKLPL +I    + D  G+ TPP+  + SVPF WEE PGKPR    +  + ++   +   
Sbjct: 15 PKLPLFSIPFNRACDTPGLATPPVNIAGSVPFLWEEAPGKPRVSDENKPLASKQNEREGG 74

Query: 74 ----TYSLELPPRL 81
                 LELPPRL
Sbjct: 75 GGGVVRCLELPPRL 88

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BLAST of CsGy3G007980 vs. TAIR10
Match: AT4G00950.1 (Protein of unknown function (DUF688))

HSP 1 Score: 49.7 bits (117), Expect = 2.4e-06
Identity = 61/215 (28.37%), Postives = 92/215 (42.79%), Query Frame = 0


Query: 4   EAKLRRDYEVPKLPLLAITAMESPDRSGMLTPPMYSSV--SVPFRWEEEPGKPRFCFNSL 63
           E +   +  V KLP+L     +    S  ++ P++SS+  SVPF WEEEPGK        
Sbjct: 6   ETEQEGNLTVMKLPVL---PTKPNTHSHSMSSPIHSSISASVPFSWEEEPGKXXXXXXXX 65

Query: 64  NIP---------TQTQTQTY-SLELPPRLLLMDP---KISKLSPPI-------------- 123
                       + +  +T+ SLELPPRL L++     ++KL  PI              
Sbjct: 66  XXXXXXXXXXXYSSSPFETHKSLELPPRLHLLEKDGGSVTKLHSPITVFDGPYSMTTSKR 125

Query: 124 ---PSQKGFFQFHKHCCSSFRFD------KTQLGA-----------MVLRKRGVLIEKEW 170
              PS +   +    C  SFR D        ++G+            V++KRG L    +
Sbjct: 126 MDSPSFRMMVKGSADCYGSFRSDIDGDLEDLEVGSKQQENLSSGSLAVVKKRGRL---GF 185

[Close]

BLAST of CsGy3G007980 vs. TAIR10
Match: AT5G53030.1 (unknown protein)

HSP 1 Score: 46.6 bits (109), Expect = 2.1e-05
Identity = 25/52 (48.08%), Postives = 32/52 (61.54%), Query Frame = 0


Query: 31 GMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPPRLLL 83
          G+ TPP+  + SVPF WEE PGKPR       +  +   +  SLELPPRL+L
Sbjct: 36 GLATPPVNIAGSVPFLWEEAPGKPRRVKKPARLNQKGVVR--SLELPPRLVL 85

[Close]

BLAST of CsGy3G007980 vs. TAIR10
Match: AT2G46535.1 (unknown protein)

HSP 1 Score: 46.2 bits (108), Expect = 2.7e-05
Identity = 29/84 (34.52%), Postives = 41/84 (48.81%), Query Frame = 0


Query: 7  LRRDYEVPKLPLLAITAME--------SPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCF 66
          +R D E  K  L  + A +        SP    +   P+++  SVPF WE++PGKP+   
Sbjct: 1  MRGDKEEEKAKLALVLAAKSRSLLYTSSPASPRVFASPIHTLASVPFCWEDQPGKPKHPL 60

Query: 67 NSLNIPTQTQTQTYSLELPPRLLL 83
            L+ P         L+LPPRLLL
Sbjct: 61 RPLSYPK-------CLDLPPRLLL 77

[Close]

BLAST of CsGy3G007980 vs. TAIR10
Match: AT3G61840.1 (Protein of unknown function (DUF688))

HSP 1 Score: 43.1 bits (100), Expect = 2.3e-04
Identity = 25/66 (37.88%), Postives = 38/66 (57.58%), Query Frame = 0


Query: 19  LAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTYSLELPP 78
           ++++ M SPD S        S  S+PF WEEEPGKP+   + +  P+ ++     L+LPP
Sbjct: 52  VSLSLMSSPDDS-------LSRASIPFSWEEEPGKPK---HHVRHPSYSK----CLDLPP 103

Query: 79  RLLLMD 85
           R+L  D
Sbjct: 112 RMLFPD 103

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BLAST of CsGy3G007980 vs. Swiss-Prot
Match: sp|Q9M160|Y4095_ARATH (Uncharacterized protein At4g00950 OS=Arabidopsis thaliana OX=3702 GN=At4g00950 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 4.4e-05
Identity = 61/215 (28.37%), Postives = 92/215 (42.79%), Query Frame = 0


Query: 4   EAKLRRDYEVPKLPLLAITAMESPDRSGMLTPPMYSSV--SVPFRWEEEPGKPRFCFNSL 63
           E +   +  V KLP+L     +    S  ++ P++SS+  SVPF WEEEPGK        
Sbjct: 6   ETEQEGNLTVMKLPVL---PTKPNTHSHSMSSPIHSSISASVPFSWEEEPGKXXXXXXXX 65

Query: 64  NIP---------TQTQTQTY-SLELPPRLLLMDP---KISKLSPPI-------------- 123
                       + +  +T+ SLELPPRL L++     ++KL  PI              
Sbjct: 66  XXXXXXXXXXXYSSSPFETHKSLELPPRLHLLEKDGGSVTKLHSPITVFDGPYSMTTSKR 125

Query: 124 ---PSQKGFFQFHKHCCSSFRFD------KTQLGA-----------MVLRKRGVLIEKEW 170
              PS +   +    C  SFR D        ++G+            V++KRG L    +
Sbjct: 126 MDSPSFRMMVKGSADCYGSFRSDIDGDLEDLEVGSKQQENLSSGSLAVVKKRGRL---GF 185

[Close]

BLAST of CsGy3G007980 vs. TrEMBL
Match: tr|A0A0A0L338|A0A0A0L338_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119480 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 3.5e-108
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MGSEAKLRRDYEVPKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFNS 60
           MGSEAKLRRDYEVPKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFNS
Sbjct: 32  MGSEAKLRRDYEVPKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFNS 91

Query: 61  LNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQKGFFQFHKHCCSSFRFDKTQLGA 120
           LNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQKGFFQFHKHCCSSFRFDKTQLGA
Sbjct: 92  LNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQKGFFQFHKHCCSSFRFDKTQLGA 151

Query: 121 MVLRKRGVLIEKEWFCWLGKLSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQKGGS 180
           MVLRKRGVLIEKEWFCWLGKLSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQKGGS
Sbjct: 152 MVLRKRGVLIEKEWFCWLGKLSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQKGGS 211

Query: 181 FSSCFVQAKTEFW 194
           FSSCFVQAKTEFW
Sbjct: 212 FSSCFVQAKTEFW 224

[Close]

BLAST of CsGy3G007980 vs. TrEMBL
Match: tr|A0A251QIC1|A0A251QIC1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G190500 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 8.8e-27
Identity = 89/212 (41.98%), Postives = 116/212 (54.72%), Query Frame = 0


Query: 1   MGSEAKLRRDYEVPKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFNS 60
           MGSEA++  + E  KLPL +   ++S + SG LTPP+Y+SVSVPFRWEEEPGKPR C   
Sbjct: 17  MGSEAEV--EEETLKLPLFSAPQIQSLEPSGSLTPPLYTSVSVPFRWEEEPGKPRPCTAL 76

Query: 61  LNIPTQTQTQTYSLELPPRLLLMDPKISK---LSPPIPSQKGF----FQFHKHCCSSFRF 120
           + +P  T      LELPPRLLL   + S    L  P   +  F    F+    C   F  
Sbjct: 77  ITLPNPTDFSQKCLELPPRLLLETKQPSPTTVLEGPYVGRSKFQSSSFRMGMECYGDFSP 136

Query: 121 DKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEVGSDYGAVFPSSLDKE--------- 180
           ++ QLGA+VL KRG L E+ WF   G+   + K EVG     VFPSS+D E         
Sbjct: 137 ERGQLGAVVLSKRG-LKERGWFDSWGRRILKGKREVGG-ASYVFPSSVDGESDGSSVGES 196

Query: 181 KSSSRMKVAVNQKGGSFSSCFVQAKTEFWVIL 197
            SS ++K    ++ GSFSS    A+  FW  +
Sbjct: 197 SSSRQVKTTRIRRAGSFSSP-SHARPHFWTTI 223

[Close]

BLAST of CsGy3G007980 vs. TrEMBL
Match: tr|A0A2N9ILJ5|A0A2N9ILJ5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52841 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.8e-25
Identity = 88/211 (41.71%), Postives = 113/211 (53.55%), Query Frame = 0


Query: 1   MGSEAKLRRDYEVPKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFNS 60
           MGSE +      + KLPL +I   +SPD SGMLTPP+ +S SVPFRWEE+PGKPR C   
Sbjct: 1   MGSEVESDPSSTL-KLPLFSIQPTQSPDPSGMLTPPLQTSASVPFRWEEQPGKPRPCTTL 60

Query: 61  LNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQKGFFQFHKHCCSSFRF------- 120
            N  +    +   LELPPRLLL D K+  LSP    +  +    K   SSFR        
Sbjct: 61  TNFVSDFSPK--CLELPPRLLL-DTKL--LSPNNVLEGPYVGRSKFHSSSFRIIGGECYG 120

Query: 121 ------DKTQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEVGSDYGAVFPSSLDK---- 180
                 ++ QLGAMV+ KRG L EK WF   GK  F+ K EVG     VFPSS+D+    
Sbjct: 121 SFSHERERGQLGAMVISKRGSLKEKPWFGSWGKRVFKGKREVGGG-SHVFPSSVDRESDT 180

Query: 181 -EKSSSRMKVAVNQKGGSFSSCFVQAKTEFW 194
            E++S+ +K+    +  S S     +   FW
Sbjct: 181 GERNSANVKIKRTGRSQSLSGLSHASSHHFW 204

[Close]

BLAST of CsGy3G007980 vs. TrEMBL
Match: tr|A0A2P5B0T3|A0A2P5B0T3_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_282290 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 4.8e-25
Identity = 82/212 (38.68%), Postives = 111/212 (52.36%), Query Frame = 0


Query: 1   MGSEAKLRRDYE-VPKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFN 60
           MGSEA+   +   +PKLPL +I    SP+  GMLTPP  +S+SVPFRWEE+PGKPR C  
Sbjct: 1   MGSEAEPGTELSLIPKLPLFSIPPAPSPEHPGMLTPPFQTSLSVPFRWEEQPGKPRPCTA 60

Query: 61  SLNIPTQTQTQTYSLELPPRLLLMDPKISKLS-------PPIPSQKGFFQFHKHCCSSFR 120
                  ++     LELPPRLLL     S  +        P   Q   F+    C  SF 
Sbjct: 61  LATFSNLSELAPKCLELPPRLLLETKLASPTTVLEVPYVGPTRFQSSSFRMSSECYGSFS 120

Query: 121 FDK-TQLGAMVLRKRGVLIEKEWFCWLGKLSFRSKGEV-GSDYGAVFPSSLDKEKSS--- 180
            +K + LGAMVL KRG  +      W  ++ F+   EV G  Y  VFPSS+D+E      
Sbjct: 121 PEKGSSLGAMVLSKRGFKVRGWLGSWRRRVLFKGSKEVSGGSY--VFPSSVDRESDDDSV 180

Query: 181 ---SRMKVAVNQKGGSFSSCFVQAKTEFWVIL 197
              + +K+   ++GGSFSS  +  ++ FW  +
Sbjct: 181 GERTEVKMTRIRRGGSFSS-LIHPRSPFWATI 209

[Close]

BLAST of CsGy3G007980 vs. TrEMBL
Match: tr|B9SBF5|B9SBF5_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0716950 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 3.1e-24
Identity = 89/226 (39.38%), Postives = 118/226 (52.21%), Query Frame = 0


Query: 1   MGSEAKLRRDYEVPKLPL-LAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFN 60
           MGSEA+   D   P+LPL L    ++SP RSGMLTPP+YSS +VPFRWEEEPGKPR C  
Sbjct: 1   MGSEAE-AEDSSTPRLPLFLKPPYVQSPQRSGMLTPPLYSSAAVPFRWEEEPGKPRECSG 60

Query: 61  SLNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQKG-------------FFQFHKH 120
           ++  PT    +   LELPPRLLL +  +SKL  P     G             F    + 
Sbjct: 61  AITTPTDLSPK--CLELPPRLLL-EANVSKLPSPTTVLDGPYTGRSSRFQSSSFRMIRRE 120

Query: 121 CCSSFRF---DKTQLGAMVLRKRGVLIEKEWFCW-LGKLSFRSKGEV-GSDYGAVFPSSL 180
           C  SFR    ++ Q  A+VL KRG+        W  G+  F+ K EV G+ Y  VFPSS 
Sbjct: 121 CYGSFRTCSPERDQFTALVLSKRGIKDRGFLGSWRWGRRGFKGKREVAGASY--VFPSSS 180

Query: 181 -----------DKEKSSSRMKVAVNQKGGSFSSCFVQAKTEFWVIL 197
                      +KE SS  + +   ++ GSFS+    +++ FW  +
Sbjct: 181 MDREVEDGNEEEKEISSKNVTITRIRRSGSFST---SSRSHFWATI 217

The following BLAST results are available for this feature:

BLAST of CsGy3G007980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650674.1	5.3e-108	100.00	PREDICTED: uncharacterized protein At4g00950 isoform X1 [Cucumis sativus] >KGN56...	[more]
XP_004133807.2	5.3e-108	100.00	PREDICTED: uncharacterized protein At4g00950 isoform X2 [Cucumis sativus]	[more]
XP_011650675.1	2.9e-98	100.00	PREDICTED: uncharacterized protein At4g00950 isoform X3 [Cucumis sativus]	[more]
XP_011650676.1	2.9e-98	100.00	PREDICTED: uncharacterized protein At4g00950 isoform X4 [Cucumis sativus]	[more]
XP_023527385.1	9.7e-78	75.12	uncharacterized protein At4g00950-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy3G007980 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G27810.1	1.7e-07	40.54	unknown protein	[more]
AT4G00950.1	2.4e-06	28.37	Protein of unknown function (DUF688)	[more]
AT5G53030.1	2.1e-05	48.08	unknown protein	[more]
AT2G46535.1	2.7e-05	34.52	unknown protein	[more]
AT3G61840.1	2.3e-04	37.88	Protein of unknown function (DUF688)	[more]

BLAST of CsGy3G007980 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M160\|Y4095_ARATH	4.4e-05	28.37	Uncharacterized protein At4g00950 OS=Arabidopsis thaliana OX=3702 GN=At4g00950 P...	[more]

BLAST of CsGy3G007980 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L338\|A0A0A0L338_CUCSA	3.5e-108	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119480 PE=4 SV=1	[more]
tr\|A0A251QIC1\|A0A251QIC1_PRUPE	8.8e-27	41.98	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G190500 PE=4 SV=1	[more]
tr\|A0A2N9ILJ5\|A0A2N9ILJ5_FAGSY	2.8e-25	41.71	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52841 PE=4 SV=1	[more]
tr\|A0A2P5B0T3\|A0A2P5B0T3_PARAD	4.8e-25	38.68	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_282290 PE...	[more]
tr\|B9SBF5\|B9SBF5_RICCO	3.1e-24	39.38	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0716950 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008536	Ran GTPase binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G007980.1	CsGy3G007980.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34371	FAMILY NOT NAMED	coord: 10..194
None	No IPR available	PANTHER	PTHR34371:SF2	SUBFAMILY NOT NAMED	coord: 10..194

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G007980	Cla021146	Watermelon (97103) v1	cgybwmB217
CsGy3G007980	Cla004262	Watermelon (97103) v1	cgybwmB238
CsGy3G007980	Csa3G119480	Cucumber (Chinese Long) v2	cgybcuB109
CsGy3G007980	MELO3C008501	Melon (DHL92) v3.5.1	cgybmeB218
CsGy3G007980	MELO3C006014	Melon (DHL92) v3.5.1	cgybmeB200
CsGy3G007980	ClCG05G008990	Watermelon (Charleston Gray)	cgybwcgB221
CsGy3G007980	ClCG05G000740	Watermelon (Charleston Gray)	cgybwcgB203
CsGy3G007980	CSPI03G07840	Wild cucumber (PI 183967)	cgybcpiB110
CsGy3G007980	CmaCh08G001370	Cucurbita maxima (Rimu)	cgybcmaB464
CsGy3G007980	CmaCh14G021160	Cucurbita maxima (Rimu)	cgybcmaB318
CsGy3G007980	CmoCh14G021780	Cucurbita moschata (Rifu)	cgybcmoB290
CsGy3G007980	CmoCh08G001380	Cucurbita moschata (Rifu)	cgybcmoB430
CsGy3G007980	Lsi05G021320	Bottle gourd (USVL1VR-Ls)	cgyblsiB196
CsGy3G007980	Cp4.1LG17g10350	Cucurbita pepo (Zucchini)	cgybcpeB359
CsGy3G007980	Cp4.1LG03g15950	Cucurbita pepo (Zucchini)	cgybcpeB406
CsGy3G007980	MELO3C006014.2	Melon (DHL92) v3.6.1	cgybmedB201
CsGy3G007980	CsaV3_3G007960	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G007980	Cla97C05G080850	Watermelon (97103) v2	cgybwmbB196
CsGy3G007980	Bhi01G000365	Wax gourd	cgybwgoB272
CsGy3G007980	Bhi01G001121	Wax gourd	cgybwgoB282
CsGy3G007980	Carg25702	Silver-seed gourd	carcgybB0131

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G007980	Cucurbita moschata (Rifu)	cgybcmoB372
CsGy3G007980	Cucurbita moschata (Rifu)	cgybcmoB401
CsGy3G007980	Cucurbita pepo (Zucchini)	cgybcpeB428
CsGy3G007980	Cucurbita pepo (Zucchini)	cgybcpeB454
CsGy3G007980	Cucumber (Chinese Long) v2	cgybcuB125
CsGy3G007980	Bottle gourd (USVL1VR-Ls)	cgyblsiB137
CsGy3G007980	Melon (DHL92) v3.5.1	cgybmeB142
CsGy3G007980	Melon (DHL92) v3.6.1	cgybmedB139
CsGy3G007980	Watermelon (Charleston Gray)	cgybwcgB189
CsGy3G007980	Watermelon (97103) v1	cgybwmB243
CsGy3G007980	Wild cucumber (PI 183967)	cgybcpiB126
CsGy3G007980	Silver-seed gourd	carcgybB0980
CsGy3G007980	Cucumber (Chinese Long) v3	cgybcucB130
CsGy3G007980	Watermelon (97103) v2	cgybwmbB166
CsGy3G007980	Watermelon (97103) v2	cgybwmbB214
CsGy3G007980	Wax gourd	cgybwgoB249
CsGy3G007980	Cucumber (Gy14) v2	cgybcgybB085
CsGy3G007980	Cucurbita maxima (Rimu)	cgybcmaB401
CsGy3G007980	Cucurbita maxima (Rimu)	cgybcmaB430