Cla021146 (gene) Watermelon (97103) v1

Overview
NameCla021146
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr5 : 765193 .. 766104 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAGTGAAGCAAAGCTATGGCAAAATTCTGAAGTACCAAAGCTTCCATTACTTGCAATTGCAGCAATGGAGTCTCCAGATCGGTCTGGAATGCTAACCCCACCAATCCACACCTCAGTCTCAGTCCCATTTCGATGGGAAGAAGAGCCTGGCAAGCCCAGGTTCTGTTTCACAACCCCCAACACAGTCACGCAAACAAACTGCCTTGAACTTCCACCAAGATTGTTACTAATTGATCCCAAAACCCCAAAACTCCCTTCTCAAAAGCCCCCTTTTCAGTTTCATAACCACTGTTGTGGCTCACTCAGATTTCATAAATCTCAGCTTGGAGCCATGGTTCTCAGAAAGAGAGGACTGCTGATTGAGAAGGAATGGTTTTGTTGGTTGGGAAAATTGAGTTTTGGGCGCAAAGGGGAAGTTGGGTCTGCCTTTGGAAGTGTATTTCCTTCTTCTTTGGAAGATGCGATTGTTGCAGAGAGAAGCAGTTCAAGGATGAAAGTTGCAGTGACCCAGAAAGATGGGAGCTTTTCTTCTTGTCTTCTCCAACCCAAGACTGAGTTTTGGGTAATGTTGCAACCACCCCTCTTCTTCTCTGTCTTTATCTATGTTAACAATCATGACATTTTAACATTCCCTAAGAAAACATGAGAGAAATAAAGGTTTTCTTCCAAGTTGTAATAAAAATATCACCAGTTCTCTTTGATTCTGTGATGTGTTGCATTGACAGTTCCAAGCTTTCTGTGAAGAGTTTTCCCTCCTGGGTTTACAAGAAGAGAAAAATTTCAAAGGAGTGTGTTGTTTTCCAAATTGTGATCATTAATGAAACTAATACTGTTTGAGGAATTGCAGGGAAGCATAGGTGAGGGGTTGAAACAGATCAACATTCCATGGAAGAGCAAAAAAGCATAA

mRNA sequence

ATGGGAAGTGAAGCAAAGCTATGGCAAAATTCTGAAGTACCAAAGCTTCCATTACTTGCAATTGCAGCAATGGAGTCTCCAGATCGGTCTGGAATGCTAACCCCACCAATCCACACCTCAGTCTCAGTCCCATTTCGATGGGAAGAAGAGCCTGGCAAGCCCAGGTTCTGTTTCACAACCCCCAACACAGTCACGCAAACAAACTGCCTTGAACTTCCACCAAGATTGTTACTAATTGATCCCAAAACCCCAAAACTCCCTTCTCAAAAGCCCCCTTTTCAGTTTCATAACCACTGTTGTGGCTCACTCAGATTTCATAAATCTCAGCTTGGAGCCATGGTTCTCAGAAAGAGAGGACTGCTGATTGAGAAGGAATGGTTTTGTTGGTTGGGAAAATTGAGTTTTGGGCGCAAAGGGGAAGTTGGGTCTGCCTTTGGAAGTGTATTTCCTTCTTCTTTGGAAGATGCGATTGTTGCAGAGAGAAGCAGTTCAAGGATGAAAGTTGCAGTGACCCAGAAAGATGGGAGCTTTTCTTCTTGTCTTCTCCAACCCAAGACTGAGTTTTGGGGAAGCATAGGTGAGGGGTTGAAACAGATCAACATTCCATGGAAGAGCAAAAAAGCATAA

Coding sequence (CDS)

ATGGGAAGTGAAGCAAAGCTATGGCAAAATTCTGAAGTACCAAAGCTTCCATTACTTGCAATTGCAGCAATGGAGTCTCCAGATCGGTCTGGAATGCTAACCCCACCAATCCACACCTCAGTCTCAGTCCCATTTCGATGGGAAGAAGAGCCTGGCAAGCCCAGGTTCTGTTTCACAACCCCCAACACAGTCACGCAAACAAACTGCCTTGAACTTCCACCAAGATTGTTACTAATTGATCCCAAAACCCCAAAACTCCCTTCTCAAAAGCCCCCTTTTCAGTTTCATAACCACTGTTGTGGCTCACTCAGATTTCATAAATCTCAGCTTGGAGCCATGGTTCTCAGAAAGAGAGGACTGCTGATTGAGAAGGAATGGTTTTGTTGGTTGGGAAAATTGAGTTTTGGGCGCAAAGGGGAAGTTGGGTCTGCCTTTGGAAGTGTATTTCCTTCTTCTTTGGAAGATGCGATTGTTGCAGAGAGAAGCAGTTCAAGGATGAAAGTTGCAGTGACCCAGAAAGATGGGAGCTTTTCTTCTTGTCTTCTCCAACCCAAGACTGAGTTTTGGGGAAGCATAGGTGAGGGGTTGAAACAGATCAACATTCCATGGAAGAGCAAAAAAGCATAA

Protein sequence

MGSEAKLWQNSEVPKLPLLAIAAMESPDRSGMLTPPIHTSVSVPFRWEEEPGKPRFCFTTPNTVTQTNCLELPPRLLLIDPKTPKLPSQKPPFQFHNHCCGSLRFHKSQLGAMVLRKRGLLIEKEWFCWLGKLSFGRKGEVGSAFGSVFPSSLEDAIVAERSSSRMKVAVTQKDGSFSSCLLQPKTEFWGSIGEGLKQINIPWKSKKA
Homology
[Close]
BLAST of Cla021146 vs. TrEMBL
Match: A0A0A0L338_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119480 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 3.8e-83
Identity = 162/219 (73.97%), Postives = 180/219 (82.19%), Query Frame = 1 

Query: 1   MGSEAKLWQNSEVPKLPLLAIAAMESPDRSGMLTPPIHTSVSVPFRWEEEPGKPRFCFTT 60
           MGSEAKL ++ EVPKLPLLAI AMESPDRSGMLTPP+++SVSVPFRWEEEPGKPRFCF +
Sbjct: 32  MGSEAKLRRDYEVPKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFNS 91

Query: 61  PN----TVTQTNCLELPPRLLLIDPK----TPKLPSQKPPFQFHNHCCGSLRFHKSQLGA 120
            N    T TQT  LELPPRLLL+DPK    +P +PSQK  FQFH HCC S RF K+QLGA
Sbjct: 92  LNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQKGFFQFHKHCCSSFRFDKTQLGA 151

Query: 121 MVLRKRGLLIEKEWFCWLGKLSFGRKGEVGSAFGSVFPSSLEDAIVAERSSSRMKVAVTQ 180
           MVLRKRG+LIEKEWFCWLGKLSF  KGEVGS +G+VFPSSL+     E+SSSRMKVAV Q
Sbjct: 152 MVLRKRGVLIEKEWFCWLGKLSFRSKGEVGSDYGAVFPSSLD----KEKSSSRMKVAVNQ 211

Query: 181 KDGSFSSCLLQPKTEFW---GSIGEGLKQINIPWKSKKA 209
           K GSFSSC +Q KTEFW   G+IGEG KQINIPWKSK+A
Sbjct: 212 KGGSFSSCFVQAKTEFWELQGNIGEGFKQINIPWKSKRA 246

[Close]
BLAST of Cla021146 vs. TrEMBL
Match: A0A0D2QJ14_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G153800 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 5.4e-29
Identity = 97/234 (41.45%), Postives = 127/234 (54.27%), Query Frame = 1 

Query: 1   MGSEAKLWQNSEVPKLPLLAI--AAMESPDRSGMLTPPIHTSVSVPFRWEEEPGKPRFC- 60
           MG+EA+  ++S  PKLPL +   A M+SP+RSG  TPP+H S SVPFRWE+EPGKP+ C 
Sbjct: 1   MGTEAEN-ESSYTPKLPLFSAPQAHMQSPERSGTSTPPLHVSASVPFRWEDEPGKPKPCT 60

Query: 61  ----FTTPNTVTQTNCLELPPRLLLIDPKT----PKLPSQKPPFQFHNHCCGSLRF---- 120
               F+ PN + Q  CLELPPRLL     T    P        F+  + C GS R     
Sbjct: 61  TLTLFSNPNHLAQ-KCLELPPRLLQDAKSTTVLEPARLQSSSSFRMGSECYGSFRVGSVS 120

Query: 121 -HKSQLGAMVLRKRGLLIEKEWFCWLGKLSFGRKGEVGSAFGS-VFPSS----------L 180
             + QLG MVL KRG   +K +     + +F  K EVG A  S VFPSS           
Sbjct: 121 PERVQLGTMVLSKRGTYKDKGFLGSWKRKTFKAKREVGGAGKSYVFPSSGDKDSECSREE 180

Query: 181 EDAIVAERSSSRMKVAVTQKDGSFSSCLLQPKTEFWGSIGEGLKQINIPWKSKK 208
           E+    E +SS +K    ++ GSF + L   K+ FW +I +GLK + +PW  KK
Sbjct: 181 EEEEEEESNSSSVKTTRIKRVGSFHN-LFNSKSHFWATIYQGLK-LAVPWNKKK 230

[Close]
BLAST of Cla021146 vs. TrEMBL
Match: A0A061DTJ6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_005124 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 5.4e-29
Identity = 102/241 (42.32%), Postives = 126/241 (52.28%), Query Frame = 1 

Query: 1   MGSEAKLWQNSEVPKLPLLAI--AAMESPDRSGMLTPPIHTSVSVPFRWEEEPGKPRFC- 60
           MGSEA+  ++S  PKLPL +   A M+SP+RSGMLTPP+H   SVPFRWEEEPGKP+ C 
Sbjct: 1   MGSEAEK-ESSCTPKLPLFSASHAHMQSPERSGMLTPPLHALASVPFRWEEEPGKPKPCT 60

Query: 61  -----FTTPNTVTQTNCLELPPRLLLIDPKTPKLPS---------------QKPPFQFHN 120
                F+ PN   Q  CLELPPRLLL    T KLPS               Q   F+  +
Sbjct: 61  TLATIFSNPNDFAQ-KCLELPPRLLLDAKITDKLPSPTTVLEGPYRGRARFQSSSFRMAS 120

Query: 121 HCCGSLRF-----HKSQLGAMVLRKRGLLIEKEWFCWLGKLSFGRKGEVGSAFGSVFPSS 180
            C GS R          L  MVL KRG   +     W  +    R+   G ++  VFPSS
Sbjct: 121 ECYGSFRAGSYSPEMVHLDTMVLSKRGYKEKGFLGSWRRRALKARREVGGKSY--VFPSS 180

Query: 181 ----LEDAIVAERSSSRMKVAVT--QKDGSFSSCLLQPKTEFWGSIGEGLKQINIPWKSK 208
                E     E SS    V +T  ++ GSFSS L   K+ FW SI EGLKQ+ +PW  +
Sbjct: 181 GDRDSECCREGEESSGSTSVKITRIRRVGSFSS-LSHSKSHFWASIYEGLKQV-VPWSKR 235

[Close]
BLAST of Cla021146 vs. TrEMBL
Match: W9RLJ7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023489 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.5e-28
Identity = 94/244 (38.52%), Postives = 123/244 (50.41%), Query Frame = 1 

Query: 1   MGSEAKLWQNSEVPKLPLLAIAA--MESPDRSGMLTPPIHTSVSVPFRWEEEPGKPRFCF 60
           M SEA   ++    KLPL +I++  M SP+  GMLTPP+ TS+SVPFRWEEEPGKPR C 
Sbjct: 1   MDSEAAQSESISTLKLPLFSISSINMASPEHPGMLTPPLQTSLSVPFRWEEEPGKPRPCL 60

Query: 61  --TTPNTVTQT---NCLELPPRLLLIDPKTPKLPS------------------------- 120
             TT +T        CLELPPR+LL   +T KLPS                         
Sbjct: 61  ALTTLSTTHDDMAPKCLELPPRMLLSVSET-KLPSPTTVLEGPYVGRQRFRSSSFRMGSE 120

Query: 121 --QKPPFQFHNHCCG---SLRFHKSQLGAMVLRKRGLLIEKEWFCWLGKLSFGRKGEVGS 180
             Q   F+  + C G   S    +  L AMVL KRG  + K WF    +  F +  +  S
Sbjct: 121 RFQSSSFRMGSECYGRSFSPERERGSLAAMVLSKRGFKV-KSWFGSWRRRVFLKGNKEAS 180

Query: 181 AFGSVFPSSLEDAIVAERSSSRMKVAVTQKDGSFSSCLLQPKTEFWGSIGEGLKQINIPW 208
               VFPSS++            K+   ++  SFSS  + P++ FW +I EGLKQ  +PW
Sbjct: 181 GGSYVFPSSVDRESDESSGGDVKKMTKIRRGASFSSLTIHPRSHFWATICEGLKQA-VPW 240

[Close]
BLAST of Cla021146 vs. TrEMBL
Match: B9SBF5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0716950 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 4.6e-28
Identity = 101/239 (42.26%), Postives = 129/239 (53.97%), Query Frame = 1 

Query: 1   MGSEAKLWQNSEVPKLPL-LAIAAMESPDRSGMLTPPIHTSVSVPFRWEEEPGKPRFC-- 60
           MGSEA+  ++S  P+LPL L    ++SP RSGMLTPP+++S +VPFRWEEEPGKPR C  
Sbjct: 1   MGSEAEA-EDSSTPRLPLFLKPPYVQSPQRSGMLTPPLYSSAAVPFRWEEEPGKPRECSG 60

Query: 61  -FTTPNTVTQTNCLELPPRLLLIDPKTPKLPS----------------QKPPFQ-FHNHC 120
             TTP T     CLELPPRLLL +    KLPS                Q   F+     C
Sbjct: 61  AITTP-TDLSPKCLELPPRLLL-EANVSKLPSPTTVLDGPYTGRSSRFQSSSFRMIRREC 120

Query: 121 CGSLRF---HKSQLGAMVLRKRGLLIEKEWFCW-LGKLSFGRKGEVGSAFGSVFPSS--- 180
            GS R     + Q  A+VL KRG+        W  G+  F  K EV  A   VFPSS   
Sbjct: 121 YGSFRTCSPERDQFTALVLSKRGIKDRGFLGSWRWGRRGFKGKREVAGA-SYVFPSSSMD 180

Query: 181 --LEDAIVAERSSSRMKVAVT--QKDGSFSSCLLQPKTEFWGSIGEGLKQINIPWKSKK 208
             +ED    E+  S   V +T  ++ GSFS+     ++ FW +I EGLKQ+ +PW+S K
Sbjct: 181 REVEDGNEEEKEISSKNVTITRIRRSGSFST---SSRSHFWATIYEGLKQV-VPWRSGK 231

[Close]
BLAST of Cla021146 vs. NCBI nr
Match: gi|778676857|ref|XP_004133807.2| (PREDICTED: uncharacterized protein At4g00950 isoform X2 [Cucumis sativus])

HSP 1 Score: 321.2 bits (822), Expect = 1.3e-84
Identity = 162/216 (75.00%), Postives = 180/216 (83.33%), Query Frame = 1 

Query: 1   MGSEAKLWQNSEVPKLPLLAIAAMESPDRSGMLTPPIHTSVSVPFRWEEEPGKPRFCFTT 60
           MGSEAKL ++ EVPKLPLLAI AMESPDRSGMLTPP+++SVSVPFRWEEEPGKPRFCF +
Sbjct: 32  MGSEAKLRRDYEVPKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFNS 91

Query: 61  PN----TVTQTNCLELPPRLLLIDPK----TPKLPSQKPPFQFHNHCCGSLRFHKSQLGA 120
            N    T TQT  LELPPRLLL+DPK    +P +PSQK  FQFH HCC S RF K+QLGA
Sbjct: 92  LNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQKGFFQFHKHCCSSFRFDKTQLGA 151

Query: 121 MVLRKRGLLIEKEWFCWLGKLSFGRKGEVGSAFGSVFPSSLEDAIVAERSSSRMKVAVTQ 180
           MVLRKRG+LIEKEWFCWLGKLSF  KGEVGS +G+VFPSSL+     E+SSSRMKVAV Q
Sbjct: 152 MVLRKRGVLIEKEWFCWLGKLSFRSKGEVGSDYGAVFPSSLD----KEKSSSRMKVAVNQ 211

Query: 181 KDGSFSSCLLQPKTEFWGSIGEGLKQINIPWKSKKA 209
           K GSFSSC +Q KTEFWG+IGEG KQINIPWKSK+A
Sbjct: 212 KGGSFSSCFVQAKTEFWGNIGEGFKQINIPWKSKRA 243

[Close]
BLAST of Cla021146 vs. NCBI nr
Match: gi|778676854|ref|XP_011650674.1| (PREDICTED: uncharacterized protein At4g00950 isoform X1 [Cucumis sativus])

HSP 1 Score: 315.8 bits (808), Expect = 5.4e-83
Identity = 162/219 (73.97%), Postives = 180/219 (82.19%), Query Frame = 1 

Query: 1   MGSEAKLWQNSEVPKLPLLAIAAMESPDRSGMLTPPIHTSVSVPFRWEEEPGKPRFCFTT 60
           MGSEAKL ++ EVPKLPLLAI AMESPDRSGMLTPP+++SVSVPFRWEEEPGKPRFCF +
Sbjct: 32  MGSEAKLRRDYEVPKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFNS 91

Query: 61  PN----TVTQTNCLELPPRLLLIDPK----TPKLPSQKPPFQFHNHCCGSLRFHKSQLGA 120
            N    T TQT  LELPPRLLL+DPK    +P +PSQK  FQFH HCC S RF K+QLGA
Sbjct: 92  LNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQKGFFQFHKHCCSSFRFDKTQLGA 151

Query: 121 MVLRKRGLLIEKEWFCWLGKLSFGRKGEVGSAFGSVFPSSLEDAIVAERSSSRMKVAVTQ 180
           MVLRKRG+LIEKEWFCWLGKLSF  KGEVGS +G+VFPSSL+     E+SSSRMKVAV Q
Sbjct: 152 MVLRKRGVLIEKEWFCWLGKLSFRSKGEVGSDYGAVFPSSLD----KEKSSSRMKVAVNQ 211

Query: 181 KDGSFSSCLLQPKTEFW---GSIGEGLKQINIPWKSKKA 209
           K GSFSSC +Q KTEFW   G+IGEG KQINIPWKSK+A
Sbjct: 212 KGGSFSSCFVQAKTEFWELQGNIGEGFKQINIPWKSKRA 246

[Close]
BLAST of Cla021146 vs. NCBI nr
Match: gi|778676860|ref|XP_011650675.1| (PREDICTED: uncharacterized protein At4g00950 isoform X3 [Cucumis sativus])

HSP 1 Score: 260.0 bits (663), Expect = 3.5e-66
Identity = 134/181 (74.03%), Postives = 149/181 (82.32%), Query Frame = 1 

Query: 1   MGSEAKLWQNSEVPKLPLLAIAAMESPDRSGMLTPPIHTSVSVPFRWEEEPGKPRFCFTT 60
           MGSEAKL ++ EVPKLPLLAI AMESPDRSGMLTPP+++SVSVPFRWEEEPGKPRFCF +
Sbjct: 32  MGSEAKLRRDYEVPKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFNS 91

Query: 61  PN----TVTQTNCLELPPRLLLIDPK----TPKLPSQKPPFQFHNHCCGSLRFHKSQLGA 120
            N    T TQT  LELPPRLLL+DPK    +P +PSQK  FQFH HCC S RF K+QLGA
Sbjct: 92  LNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQKGFFQFHKHCCSSFRFDKTQLGA 151

Query: 121 MVLRKRGLLIEKEWFCWLGKLSFGRKGEVGSAFGSVFPSSLEDAIVAERSSSRMKVAVTQ 174
           MVLRKRG+LIEKEWFCWLGKLSF  KGEVGS +G+VFPSSL+     E+SSSRMKVAV Q
Sbjct: 152 MVLRKRGVLIEKEWFCWLGKLSFRSKGEVGSDYGAVFPSSLD----KEKSSSRMKVAVNQ 208

[Close]
BLAST of Cla021146 vs. NCBI nr
Match: gi|778676863|ref|XP_011650676.1| (PREDICTED: uncharacterized protein At4g00950 isoform X4 [Cucumis sativus])

HSP 1 Score: 260.0 bits (663), Expect = 3.5e-66
Identity = 134/181 (74.03%), Postives = 149/181 (82.32%), Query Frame = 1 

Query: 1   MGSEAKLWQNSEVPKLPLLAIAAMESPDRSGMLTPPIHTSVSVPFRWEEEPGKPRFCFTT 60
           MGSEAKL ++ EVPKLPLLAI AMESPDRSGMLTPP+++SVSVPFRWEEEPGKPRFCF +
Sbjct: 32  MGSEAKLRRDYEVPKLPLLAITAMESPDRSGMLTPPMYSSVSVPFRWEEEPGKPRFCFNS 91

Query: 61  PN----TVTQTNCLELPPRLLLIDPK----TPKLPSQKPPFQFHNHCCGSLRFHKSQLGA 120
            N    T TQT  LELPPRLLL+DPK    +P +PSQK  FQFH HCC S RF K+QLGA
Sbjct: 92  LNIPTQTQTQTYSLELPPRLLLMDPKISKLSPPIPSQKGFFQFHKHCCSSFRFDKTQLGA 151

Query: 121 MVLRKRGLLIEKEWFCWLGKLSFGRKGEVGSAFGSVFPSSLEDAIVAERSSSRMKVAVTQ 174
           MVLRKRG+LIEKEWFCWLGKLSF  KGEVGS +G+VFPSSL+     E+SSSRMKVAV Q
Sbjct: 152 MVLRKRGVLIEKEWFCWLGKLSFRSKGEVGSDYGAVFPSSLD----KEKSSSRMKVAVNQ 208

[Close]
BLAST of Cla021146 vs. NCBI nr
Match: gi|1009142404|ref|XP_015888705.1| (PREDICTED: uncharacterized protein At4g00950 [Ziziphus jujuba])

HSP 1 Score: 147.5 bits (371), Expect = 2.6e-32
Identity = 98/234 (41.88%), Postives = 134/234 (57.26%), Query Frame = 1 

Query: 1   MGSEAKLWQNSEVPKLPLLAIAA-MESPDRSGMLTPPIHTSVSVPFRWEEEPGKPRFC-- 60
           MGSEA+  ++S  PKLPL ++   M+SP+R GMLTPP++ SVSVPFRWEEEPGKPR C  
Sbjct: 1   MGSEAEP-ESSSTPKLPLFSLPPPMQSPERPGMLTPPLYASVSVPFRWEEEPGKPRTCNA 60

Query: 61  ---FTTPNTVTQTNCLELPPRLLLIDPKTPKLPS------------QKPPFQFHNHCCGS 120
                 P  +T   CLELPPRLLL D K P   +            Q   F+    C GS
Sbjct: 61  LATIFNPTDIT-PKCLELPPRLLL-DTKLPSPTTVFEGPYVSRSRFQSSSFRIGKECYGS 120

Query: 121 LRFHKSQLGAMVLRKRGLLIEKEWF-CWLGKLSFGRKGEVGSAFGSVFPSSLE------- 180
               + +LGAMVL K+G+  E+ WF  W  ++  G K +VG     VFPSS++       
Sbjct: 121 FSPERGRLGAMVLSKKGVK-ERGWFGSWRRRVIKGNK-DVGGGSSYVFPSSVDRENGDGG 180

Query: 181 -DAIVAERSSSRMKVAVTQKDGSFSSCLLQPKTEFWGSIGEGLKQINIPWKSKK 208
            +    E +  ++K+   ++ GSFS+ +  P++ FW +I EGLK   +PWKS+K
Sbjct: 181 GNEGERENTGGKVKMTRIRRGGSFSN-ITYPRSSFWETIYEGLKHA-VPWKSRK 227

The following BLAST results are available for this feature:
BLAST of Cla021146 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L338_CUCSA3.8e-8373.97Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119480 PE=4 SV=1[more]
A0A0D2QJ14_GOSRA5.4e-2941.45Uncharacterized protein OS=Gossypium raimondii GN=B456_001G153800 PE=4 SV=1[more]
A0A061DTJ6_THECC5.4e-2942.32Uncharacterized protein OS=Theobroma cacao GN=TCM_005124 PE=4 SV=1[more]
W9RLJ7_9ROSA3.5e-2838.52Uncharacterized protein OS=Morus notabilis GN=L484_023489 PE=4 SV=1[more]
B9SBF5_RICCO4.6e-2842.26Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0716950 PE=4 SV=1[more]
BLAST of Cla021146 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778676857|ref|XP_004133807.2|1.3e-8475.00PREDICTED: uncharacterized protein At4g00950 isoform X2 [Cucumis sativus][more]
gi|778676854|ref|XP_011650674.1|5.4e-8373.97PREDICTED: uncharacterized protein At4g00950 isoform X1 [Cucumis sativus][more]
gi|778676860|ref|XP_011650675.1|3.5e-6674.03PREDICTED: uncharacterized protein At4g00950 isoform X3 [Cucumis sativus][more]
gi|778676863|ref|XP_011650676.1|3.5e-6674.03PREDICTED: uncharacterized protein At4g00950 isoform X4 [Cucumis sativus][more]
gi|1009142404|ref|XP_015888705.1|2.6e-3241.88PREDICTED: uncharacterized protein At4g00950 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0051252 regulation of RNA metabolic process
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process GO:0008033 tRNA processing
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0006886 intracellular protein transport
cellular_component GO:0005575 cellular_component
cellular_component GO:0005655 nucleolar ribonuclease P complex
molecular_function GO:0003674 molecular_function
molecular_function GO:0004526 ribonuclease P activity
molecular_function GO:0008536 Ran GTPase binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla021146Cla021146.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34371FAMILY NOT NAMEDcoord: 9..207
score: 1.5
NoneNo IPR availablePANTHERPTHR34371:SF2SUBFAMILY NOT NAMEDcoord: 9..207
score: 1.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla021146Cla97C05G080850Watermelon (97103) v2wmwmbB206
Cla021146Cla97C05G091300Watermelon (97103) v2wmwmbB212
Cla021146Csa3G119480Cucumber (Chinese Long) v2cuwmB233
Cla021146MELO3C006014Melon (DHL92) v3.5.1mewmB461
Cla021146MELO3C008501Melon (DHL92) v3.5.1mewmB470
Cla021146ClCG05G000740Watermelon (Charleston Gray)wcgwmB286
Cla021146ClCG05G008990Watermelon (Charleston Gray)wcgwmB291
Cla021146CSPI03G07840Wild cucumber (PI 183967)cpiwmB231
Cla021146Cucsa.259320Cucumber (Gy14) v1cgywmB479
Cla021146CmaCh14G021160Cucurbita maxima (Rimu)cmawmB242
Cla021146CmoCh14G021780Cucurbita moschata (Rifu)cmowmB231
Cla021146Lsi05G021320Bottle gourd (USVL1VR-Ls)lsiwmB365
Cla021146Lsi05G001080Bottle gourd (USVL1VR-Ls)lsiwmB372
Cla021146Cp4.1LG03g15950Cucurbita pepo (Zucchini)cpewmB613
Cla021146CsGy3G007980Cucumber (Gy14) v2cgybwmB217
Cla021146MELO3C006014.2Melon (DHL92) v3.6.1medwmB447
Cla021146Carg25702Silver-seed gourdcarwmB0122
Cla021146CsaV3_3G007960Cucumber (Chinese Long) v3cucwmB239
Cla021146Bhi01G001121Wax gourdwgowmB221
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cla021146Cla004262Watermelon (97103) v1wmwmB118
The following block(s) are covering this gene:
GeneOrganismBlock
Cla021146Watermelon (97103) v2wmwmbB187
Cla021146Wax gourdwgowmB071
Cla021146Wax gourdwgowmB212
Cla021146Watermelon (97103) v1wmwmB119
Cla021146Cucumber (Gy14) v1cgywmB398
Cla021146Cucurbita maxima (Rimu)cmawmB799
Cla021146Cucurbita moschata (Rifu)cmowmB793
Cla021146Melon (DHL92) v3.5.1mewmB022
Cla021146Watermelon (Charleston Gray)wcgwmB130
Cla021146Cucumber (Chinese Long) v2cuwmB397
Cla021146Cucurbita pepo (Zucchini)cpewmB704
Cla021146Cucurbita pepo (Zucchini)cpewmB845
Cla021146Bottle gourd (USVL1VR-Ls)lsiwmB018
Cla021146Cucumber (Gy14) v2cgybwmB373
Cla021146Melon (DHL92) v3.6.1medwmB018
Cla021146Silver-seed gourdcarwmB0992
Cla021146Cucumber (Chinese Long) v3cucwmB423