CU086282 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU086282
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 6719798 .. 6720424 (-)
Sequence length405
The following sequences are available for this feature:

transcribed_cluster sequence

TTGAGTTTTAGGAGCAAAGGGGAAGTTGGGTCTGACTATGGTGCTGTATTTCCTTCTTCTTTGGATAAGGAGAAAAGCAGTTCAAGGATGAAAGTTGCTGTGAACCAGAAAGGTGGGAGCTTTTCTTCTTGTTTTGTCCAAGCCTAAGTACTGAGTTTTGGGGAAACATAGGGGAAGGGTTTAAACAGATCAACATTCCATGGAAGAGCAAAAGAGCATAAGAAAGAGGACTGGTAAATCATTAGAATGTTTATGAATAAAACCGAGTTTAGCTTGTTGTAATGTAAATGCATCAAATAATCGTAATATGGAGGAGGACTAATGACTTAGTTAATGACTGAGGTCTTGTGTATTTGATATTCTTGTACAGAAATAATGTTATGAATCATATGGCTTTATGAGTTG
BLAST of CU086282 vs. TrEMBL
Match: A0A0A0L338_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119480 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.3e-17
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 1

Query: 1   LSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQKGGSFSSCFVQA 60
           LSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQKGGSFSSCFVQA
Sbjct: 172 LSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQKGGSFSSCFVQA 219

Query: 61  120
           
Sbjct: 232 219

Query: 121 145
           
Sbjct: 292 219

BLAST of CU086282 vs. TrEMBL
Match: A0A0A0L338_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119480 PE=4 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 3.3e-03
Identity = 23/26 (88.46%), Postives = 23/26 (88.46%), Query Frame = 3

Query: 150 TEFW---GNIGEGFKQINIPWKSKRA 209
           TEFW   GNIGEGFKQINIPWKSKRA
Sbjct: 221 TEFWELQGNIGEGFKQINIPWKSKRA 246

Query: 210 219
           
Sbjct: 281 246

BLAST of CU086282 vs. NCBI nr
Match: gi|778676857|ref|XP_004133807.2| (PREDICTED: uncharacterized protein At4g00950 isoform X2 [Cucumis sativus])

HSP 1 Score: 97.8 bits (242), Expect = 1.5e-17
Identity = 52/71 (73.24%), Postives = 57/71 (80.28%), Query Frame = 1

Query: 1   LSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQKGGSFSSCFVQA*VLSFGET*GKG 60
           LSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQKGGSFSSCFVQA    +G   G+G
Sbjct: 172 LSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQKGGSFSSCFVQAKTEFWGNI-GEG 231

Query: 61  LNRSTFHGRAK 120
             +     ++K
Sbjct: 232 FKQINIPWKSK 241

Query: 121 180
           
Sbjct: 292 241

Query: 181 214
           
Sbjct: 352 241

BLAST of CU086282 vs. NCBI nr
Match: gi|778676854|ref|XP_011650674.1| (PREDICTED: uncharacterized protein At4g00950 isoform X1 [Cucumis sativus])

HSP 1 Score: 96.3 bits (238), Expect = 4.4e-17
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 1

Query: 1   LSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQKGGSFSSCFVQA 60
           LSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQKGGSFSSCFVQA
Sbjct: 172 LSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQKGGSFSSCFVQA 219

Query: 61  120
           
Sbjct: 232 219

Query: 121 145
           
Sbjct: 292 219

BLAST of CU086282 vs. NCBI nr
Match: gi|778676860|ref|XP_011650675.1| (PREDICTED: uncharacterized protein At4g00950 isoform X3 [Cucumis sativus])

HSP 1 Score: 75.9 bits (185), Expect = 6.2e-11
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 1

Query: 1   LSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQKG 60
           LSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQKG
Sbjct: 172 LSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQKG 209

Query: 61  115
           
Sbjct: 232 209

BLAST of CU086282 vs. NCBI nr
Match: gi|778676863|ref|XP_011650676.1| (PREDICTED: uncharacterized protein At4g00950 isoform X4 [Cucumis sativus])

HSP 1 Score: 75.9 bits (185), Expect = 6.2e-11
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 1

Query: 1   LSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQKG 60
           LSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQKG
Sbjct: 172 LSFRSKGEVGSDYGAVFPSSLDKEKSSSRMKVAVNQKG 209

Query: 61  115
           
Sbjct: 232 209

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L338_CUCSA2.3e-17100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119480 PE=4 SV=1[more]
A0A0A0L338_CUCSA3.3e-0388.46Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119480 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778676857|ref|XP_004133807.2|1.5e-1773.24PREDICTED: uncharacterized protein At4g00950 isoform X2 [Cucumis sativus][more]
gi|778676854|ref|XP_011650674.1|4.4e-17100.00PREDICTED: uncharacterized protein At4g00950 isoform X1 [Cucumis sativus][more]
gi|778676860|ref|XP_011650675.1|6.2e-11100.00PREDICTED: uncharacterized protein At4g00950 isoform X3 [Cucumis sativus][more]
gi|778676863|ref|XP_011650676.1|6.2e-11100.00PREDICTED: uncharacterized protein At4g00950 isoform X4 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa3G119480Csa3G119480gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02KVYZFFKNP3UI02KVYZFEST
FKNP3UI02OCR7QFKNP3UI02OCR7QEST
H0132232H0132232EST