Csa3G042390 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G042390
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionDehydration responsive element binding transcription factor 1B; contains IPR016177 (DNA-binding, integrase-type)
LocationChr3 : 2990805 .. 2991523 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCCTCTCTCTCATAATGCATATGTATATAGGAGGGTGACCCAAATATACCTATAAACGTATAGGCTAAAGTAGGCTCAATCATCACTATCTTCTAAACTACTTTTCTCACTTCCTAACACTCTCAAATTTCATACCTTTTTCTTCTTTATCCATCAAACCAAAACCCTTTACCTAACCTCATGGCCTCTACATCCTCCAAGAGACATGATCACTACAAAGGAATCCGCTGCCGGGGTGGCAAATGGGTCTCCGAGATTCGTGAGCCACGTAAGACTAATCGAATATGGCTCCGCACGTAAGACTAATCGAATATGGCTCGGCACCTACCCTACACCCGAAATGGCTGCTGCTGCCTACGACGTAGCCGCACTCGCACTCAAGGGTTGCAATGCCGTTCTCAACTTCCCCAACTCAGTTGCCTTCTACCCGGTTCCTGCTTCCACATCCCCCAATGATATCCGTATTGCTGCTGCTGCTGCCGCCGCGTCCAAAAAGGTTGATGATCAAGGAGAAAACAGTTACCATAACTCTCACTACCAATCTCCACCAACCAATGAGTTTGTCGATGAAGAAGCGCTGTTCGGAATGCCAAATCTTTTACATGACATGGCTGAGGGAATGCTGTTGTCGCCCCCACGAATGAACTCGTCGCCGTCTCGACATGATTACTACTCGTGGAATTCAAGTGGAGATGGAAATCTTTGGAGCTACCACTAG

mRNA sequence

ATGATCACTACAAAGGAATCCGCTGCCGGGGTGGCAAATGGGTCTCCGAGATTCGTGAGCCACGTAAGACTAATCGAATATGGCTCCGCACGTAAGACTAATCGAATATGGCTCGGCACCTACCCTACACCCGAAATGGCTGCTGCTGCCTACGACGTAGCCGCACTCGCACTCAAGGGTTGCAATGCCGTTCTCAACTTCCCCAACTCAGTTGCCTTCTACCCGGTTCCTGCTTCCACATCCCCCAATGATATCCGTATTGCTGCTGCTGCTGCCGCCGCGTCCAAAAAGGTTGATGATCAAGGAGAAAACAGTTACCATAACTCTCACTACCAATCTCCACCAACCAATGAGTTTGTCGATGAAGAAGCGCTGTTCGGAATGCCAAATCTTTTACATGACATGGCTGAGGGAATGCTGTTGTCGCCCCCACGAATGAACTCGTCGCCGTCTCGACATGATTACTACTCGTGGAATTCAAGTGGAGATGGAAATCTTTGGAGCTACCACTAG

Coding sequence (CDS)

ATGATCACTACAAAGGAATCCGCTGCCGGGGTGGCAAATGGGTCTCCGAGATTCGTGAGCCACGTAAGACTAATCGAATATGGCTCCGCACGTAAGACTAATCGAATATGGCTCGGCACCTACCCTACACCCGAAATGGCTGCTGCTGCCTACGACGTAGCCGCACTCGCACTCAAGGGTTGCAATGCCGTTCTCAACTTCCCCAACTCAGTTGCCTTCTACCCGGTTCCTGCTTCCACATCCCCCAATGATATCCGTATTGCTGCTGCTGCTGCCGCCGCGTCCAAAAAGGTTGATGATCAAGGAGAAAACAGTTACCATAACTCTCACTACCAATCTCCACCAACCAATGAGTTTGTCGATGAAGAAGCGCTGTTCGGAATGCCAAATCTTTTACATGACATGGCTGAGGGAATGCTGTTGTCGCCCCCACGAATGAACTCGTCGCCGTCTCGACATGATTACTACTCGTGGAATTCAAGTGGAGATGGAAATCTTTGGAGCTACCACTAG

Protein sequence

MITTKESAAGVANGSPRFVSHVRLIEYGSARKTNRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPNSVAFYPVPASTSPNDIRIAAAAAAASKKVDDQGENSYHNSHYQSPPTNEFVDEEALFGMPNLLHDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSYH*
Homology
[Close]
BLAST of Csa3G042390 vs. Swiss-Prot
Match: ERF26_ARATH (Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana GN=ERF026 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 5.5e-33
Identity = 85/167 (50.90%), Postives = 108/167 (64.67%), Query Frame = 1 

Query: 10  GVANGSPRFVSHVRLIEYGSARKTNRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPN 69
           G+   S ++VS +R       +KT R+WLGTYPTPEMAAAAYDVAALALKG + +LNFP+
Sbjct: 92  GIRCRSGKWVSEIR-----EPKKTTRVWLGTYPTPEMAAAAYDVAALALKGGDTLLNFPD 151

Query: 70  SVAFYPVPASTSPNDIRIAAAAAAASK-------KVDDQGENSYHNSHYQSPPTNEFVDE 129
           S+  YP+P S+S   IR AAAAAAA++       KV  + E+  +++   S  T  FVDE
Sbjct: 152 SLGSYPIPLSSSAAHIRCAAAAAAATRGAAGAAVKVGQKKEDKVYDTAESS--TMGFVDE 211

Query: 130 EALFGMPNLLHDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSY 170
           E L  MP LL DMA+GM+++PP M S PS  D    NS G+ +LWSY
Sbjct: 212 EELLNMPGLLADMAKGMMVAPPWMGSPPS--DDSPENSDGE-SLWSY 248

[Close]
BLAST of Csa3G042390 vs. Swiss-Prot
Match: ERF25_ARATH (Ethylene-responsive transcription factor ERF025 OS=Arabidopsis thaliana GN=ERF025 PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.8e-32
Identity = 84/171 (49.12%), Postives = 97/171 (56.73%), Query Frame = 1 

Query: 10  GVANGSPRFVSHVRLIEYGSARKTNRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPN 69
           G+   + ++VS +R       RKT RIWLGTYP PEMAAAAYDVAALALKG +AVLNFP 
Sbjct: 67  GIRLRNGKWVSEIR-----EPRKTTRIWLGTYPVPEMAAAAYDVAALALKGPDAVLNFPG 126

Query: 70  SVAFYPVPASTSPNDIRIAAAAAAASKKVDDQGENSY-------HNSHYQSPPTN----E 129
               Y  P S S  DIR AA+ AA  K+ D  G+               +    N    E
Sbjct: 127 LALTYVAPVSNSAADIRAAASRAAEMKQPDQGGDEKVLEPVQPGKEEELEEVSCNSCSLE 186

Query: 130 FVDEEALFGMPNLLHDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSY 170
           F+DEEA+  MP LL +MAEGML+SPPRM   P+  D    N  GD NLWSY
Sbjct: 187 FMDEEAMLNMPTLLTEMAEGMLMSPPRMMIHPTMEDDSPENHEGD-NLWSY 231

[Close]
BLAST of Csa3G042390 vs. Swiss-Prot
Match: ERF27_ARATH (Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana GN=ERF027 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 6.8e-31
Identity = 86/180 (47.78%), Postives = 100/180 (55.56%), Query Frame = 1 

Query: 10  GVANGSPRFVSHVRLIEYGSARKTNRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPN 69
           G+   S ++VS +R       RKT RIWLGTYP  EMAAAAYDVAA+ALKG  AVLNFP 
Sbjct: 21  GIRCRSGKWVSEIR-----EPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGREAVLNFPG 80

Query: 70  SVAFYPVPASTSPNDIRIAAAAAAASKKVDDQGENSYHNSHYQSPPTN------------ 129
           SV  YPVP STS  DIR AAAAAAA K  ++  E         S   +            
Sbjct: 81  SVGSYPVPESTSAADIRAAAAAAAAMKGCEEGEEEKKAKEKKSSSSKSRARECHVDNDVG 140

Query: 130 -------EFVDEEALFGMPNLLHDMAEGMLLSPPR-MNSSPSRHDYYSWNSSGDGNLWSY 170
                  EF+DEE +  MPNLL +MAEGM+++PP  M S PS     S  +S D +LW Y
Sbjct: 141 SSSWCGTEFMDEEEVLNMPNLLANMAEGMMVAPPSWMGSRPSDD---SPENSNDEDLWGY 192

[Close]
BLAST of Csa3G042390 vs. Swiss-Prot
Match: ERF24_ARATH (Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana GN=ERF024 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.0e-30
Identity = 80/166 (48.19%), Postives = 100/166 (60.24%), Query Frame = 1 

Query: 15  SPRFVSHVRLIEYGSARKTNRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPNSVAFY 74
           S ++VS +R       RK NRIWLGT+ TPEMAA AYDVAALALKG  A LNFPNSV+  
Sbjct: 24  SNKWVSEIR-----EPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQAELNFPNSVSSL 83

Query: 75  PVPASTSPNDIRIAAAAAAAS--------KKVDDQGENS---YHNSHYQSPPTNEFVDEE 134
           P P S SP DI+ AAA+AAA+           ++  + S     NS Y +   N F+DE+
Sbjct: 84  PAPTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQTSGVACMNSSYDNTNMNGFMDED 143

Query: 135 ALFGMPNLLHDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSY 170
            +F MPN+L +MAEGMLLSPPR     + +D   +   GD  LW++
Sbjct: 144 LVFDMPNVLMNMAEGMLLSPPRPTVFDAAYDADGF-PGGDDYLWNF 183

[Close]
BLAST of Csa3G042390 vs. Swiss-Prot
Match: DRE1F_ORYSI (Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. indica GN=DREB1F PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 7.5e-22
Identity = 65/147 (44.22%), Postives = 82/147 (55.78%), Query Frame = 1 

Query: 14  GSPRFVSHVRLIEYGSARKTNRIWLGTYPTPEMAAAAYDVAALALKG-CNAVLNFPNSVA 73
           G  R+V  VR       +   RIWLGTYPTPEMAA A+DVAA+AL+G   A LNFP+S +
Sbjct: 55  GGSRWVCEVR-----EPQAQARIWLGTYPTPEMAARAHDVAAIALRGERGAELNFPDSPS 114

Query: 74  FYPVPASTSPNDIRIAAAAAA----------ASKKVDDQGENSYHNSHYQSPPTNEFVDE 133
             P   + SP DIR+AAA AA          A  +   +G +    +     P   FVDE
Sbjct: 115 TLPRARTASPEDIRLAAAQAAELYRRPPPPLALPEDPQEGTSGGGATATSGRPAAVFVDE 174

Query: 134 EALFGMPNLLHDMAEGMLLSPPRMNSS 150
           +A+F MP L+ DMA GM+L+PP +  S
Sbjct: 175 DAIFDMPGLIDDMARGMMLTPPAIGRS 196

[Close]
BLAST of Csa3G042390 vs. TrEMBL
Match: A0A0A0L5V9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G042390 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 3.0e-94
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1 

Query: 1   MITTKESAAGVANGSPRFVSHVRLIEYGSARKTNRIWLGTYPTPEMAAAAYDVAALALKG 60
           MITTKESAAGVANGSPRFVSHVRLIEYGSARKTNRIWLGTYPTPEMAAAAYDVAALALKG
Sbjct: 1   MITTKESAAGVANGSPRFVSHVRLIEYGSARKTNRIWLGTYPTPEMAAAAYDVAALALKG 60

Query: 61  CNAVLNFPNSVAFYPVPASTSPNDIRIAAAAAAASKKVDDQGENSYHNSHYQSPPTNEFV 120
           CNAVLNFPNSVAFYPVPASTSPNDIRIAAAAAAASKKVDDQGENSYHNSHYQSPPTNEFV
Sbjct: 61  CNAVLNFPNSVAFYPVPASTSPNDIRIAAAAAAASKKVDDQGENSYHNSHYQSPPTNEFV 120

Query: 121 DEEALFGMPNLLHDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSYH 171
           DEEALFGMPNLLHDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSYH
Sbjct: 121 DEEALFGMPNLLHDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSYH 170

[Close]
BLAST of Csa3G042390 vs. TrEMBL
Match: W6FIY4_9ROSA (Dehydration responsive element binding transcription factor OS=Morus notabilis GN=DREB4G PE=2 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.4e-38
Identity = 101/178 (56.74%), Postives = 115/178 (64.61%), Query Frame = 1 

Query: 10  GVANGSPRFVSHVRLIEYGSARKTNRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPN 69
           G+   S ++VS +R       RKT RIWLGT+P PEMAAAAYDVAALALKG +AVLNFP 
Sbjct: 88  GIRCRSGKWVSEIR-----EPRKTTRIWLGTFPAPEMAAAAYDVAALALKGSDAVLNFPT 147

Query: 70  SVAFYPVPASTSPNDIRIAAAAAAASKKVDDQGENSYHNS-----HYQSPPT-------- 129
           SV  YPVPASTSP DIR AA AAAASK+ + +   +   +     H  S  T        
Sbjct: 148 SVGDYPVPASTSPGDIRSAATAAAASKRAELERRKAAREAMTASFHGDSSSTTTAELTTS 207

Query: 130 ---NEFVDEEALFGMPNLLHDMAEGMLLSPPRMNSSPSRHD-YYSWNSS-GDGNLWSY 170
               E+VDEEALFGMPNLL +MAEGMLLSPPRM  SP   D YYS  SS G  +LW Y
Sbjct: 208 YDHGEYVDEEALFGMPNLLVEMAEGMLLSPPRMMESPPPSDEYYSPGSSDGGDSLWGY 260

[Close]
BLAST of Csa3G042390 vs. TrEMBL
Match: A0A059CI54_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01924 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.8e-38
Identity = 96/177 (54.24%), Postives = 116/177 (65.54%), Query Frame = 1 

Query: 10  GVANGSPRFVSHVRLIEYGSARKTNRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPN 69
           G+ + S ++VS +R       RKT R+WLGTYPTPEMAAAAYDVAALALKG +AVLNFP+
Sbjct: 95  GIRSRSGKWVSEIR-----EPRKTTRVWLGTYPTPEMAAAAYDVAALALKGGDAVLNFPH 154

Query: 70  SVAFYPVPASTSPNDIRIAAAAAAASKKVDDQG-------------ENSYHNSHY----Q 129
            V  YPVPAST+P D+R AAAAAAAS+K +  G             E      H      
Sbjct: 155 LVKSYPVPASTAPTDVRRAAAAAAASRKAETSGGTDDTALLGQEGDEGKTRKDHRPDLSS 214

Query: 130 SPPTNEFVDEEALFGMPNLLHDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSY 170
            PP  EF+DEEALF MPNLL DMAEGM++SPPR++S PS     S ++S   +LWSY
Sbjct: 215 KPPEAEFIDEEALFDMPNLLVDMAEGMMVSPPRISSPPSDD---SPDNSDMESLWSY 263

[Close]
BLAST of Csa3G042390 vs. TrEMBL
Match: V4TQ11_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023840mg PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 3.1e-38
Identity = 98/166 (59.04%), Postives = 113/166 (68.07%), Query Frame = 1 

Query: 10  GVANGSPRFVSHVRLIEYGSARKTNRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPN 69
           G+   + ++VS VR       RK+ RIWLGTYPTPEMAAAAYDVAALALKG +AVLNFPN
Sbjct: 71  GIRCRNSKWVSEVR-----EPRKSTRIWLGTYPTPEMAAAAYDVAALALKGSDAVLNFPN 130

Query: 70  SVAFYPVPASTSPNDIRIAAAAAAAS------KKVDDQGENSYHNSHYQSPPTNEFVDEE 129
            V+ YPVPAS+S  DIR AAAAAAAS      + V D  EN        +    EFVDE+
Sbjct: 131 FVSTYPVPASSSSVDIRNAAAAAAASCARRKAESVSDPDENQRMEQSRSNDVIGEFVDED 190

Query: 130 ALFGMPNLLHDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSY 170
           AL  MPNLL DMAEGM++SPPR+NSSPS  D    NS G+  LWSY
Sbjct: 191 ALLNMPNLLVDMAEGMMVSPPRLNSSPS--DDSPENSDGE-RLWSY 228

[Close]
BLAST of Csa3G042390 vs. TrEMBL
Match: A0A067F854_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030591mg PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 3.1e-38
Identity = 98/169 (57.99%), Postives = 114/169 (67.46%), Query Frame = 1 

Query: 7   SAAGVANGSPRFVSHVRLIEYGSARKTNRIWLGTYPTPEMAAAAYDVAALALKGCNAVLN 66
           S  G+   + ++VS +R       RK+ RIWLGTYPTPEMAAAAYDVAALALKG +AVLN
Sbjct: 14  SYRGIRCRNSKWVSEIR-----EPRKSTRIWLGTYPTPEMAAAAYDVAALALKGSDAVLN 73

Query: 67  FPNSVAFYPVPASTSPNDIRIAAAAAAAS------KKVDDQGENSYHNSHYQSPPTNEFV 126
           FPN V+ YPVPAS+S  DIR AAAAAAAS      + V D  EN        +    EFV
Sbjct: 74  FPNFVSTYPVPASSSSVDIRNAAAAAAASCARRKAESVSDPDENQRMEQSRSNDVIGEFV 133

Query: 127 DEEALFGMPNLLHDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSY 170
           DE+AL  MPNLL DMAEGM++SPPR+NSSPS  D    NS G+  LWSY
Sbjct: 134 DEDALLNMPNLLVDMAEGMMVSPPRLNSSPS--DDSPENSDGE-RLWSY 174

[Close]
BLAST of Csa3G042390 vs. TAIR10
Match: AT5G52020.1 (AT5G52020.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 139.8 bits (351), Expect = 1.6e-33
Identity = 84/171 (49.12%), Postives = 97/171 (56.73%), Query Frame = 1 

Query: 10  GVANGSPRFVSHVRLIEYGSARKTNRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPN 69
           G+   + ++VS +R       RKT RIWLGTYP PEMAAAAYDVAALALKG +AVLNFP 
Sbjct: 67  GIRLRNGKWVSEIR-----EPRKTTRIWLGTYPVPEMAAAAYDVAALALKGPDAVLNFPG 126

Query: 70  SVAFYPVPASTSPNDIRIAAAAAAASKKVDDQGENSY-------HNSHYQSPPTN----E 129
               Y  P S S  DIR AA+ AA  K+ D  G+               +    N    E
Sbjct: 127 LALTYVAPVSNSAADIRAAASRAAEMKQPDQGGDEKVLEPVQPGKEEELEEVSCNSCSLE 186

Query: 130 FVDEEALFGMPNLLHDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSY 170
           F+DEEA+  MP LL +MAEGML+SPPRM   P+  D    N  GD NLWSY
Sbjct: 187 FMDEEAMLNMPTLLTEMAEGMLMSPPRMMIHPTMEDDSPENHEGD-NLWSY 231

[Close]
BLAST of Csa3G042390 vs. TAIR10
Match: AT1G12630.1 (AT1G12630.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 135.2 bits (339), Expect = 3.8e-32
Identity = 86/180 (47.78%), Postives = 100/180 (55.56%), Query Frame = 1 

Query: 10  GVANGSPRFVSHVRLIEYGSARKTNRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPN 69
           G+   S ++VS +R       RKT RIWLGTYP  EMAAAAYDVAA+ALKG  AVLNFP 
Sbjct: 21  GIRCRSGKWVSEIR-----EPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGREAVLNFPG 80

Query: 70  SVAFYPVPASTSPNDIRIAAAAAAASKKVDDQGENSYHNSHYQSPPTN------------ 129
           SV  YPVP STS  DIR AAAAAAA K  ++  E         S   +            
Sbjct: 81  SVGSYPVPESTSAADIRAAAAAAAAMKGCEEGEEEKKAKEKKSSSSKSRARECHVDNDVG 140

Query: 130 -------EFVDEEALFGMPNLLHDMAEGMLLSPPR-MNSSPSRHDYYSWNSSGDGNLWSY 170
                  EF+DEE +  MPNLL +MAEGM+++PP  M S PS     S  +S D +LW Y
Sbjct: 141 SSSWCGTEFMDEEEVLNMPNLLANMAEGMMVAPPSWMGSRPSDD---SPENSNDEDLWGY 192

[Close]
BLAST of Csa3G042390 vs. TAIR10
Match: AT2G36450.1 (AT2G36450.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 133.7 bits (335), Expect = 1.1e-31
Identity = 80/166 (48.19%), Postives = 100/166 (60.24%), Query Frame = 1 

Query: 15  SPRFVSHVRLIEYGSARKTNRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPNSVAFY 74
           S ++VS +R       RK NRIWLGT+ TPEMAA AYDVAALALKG  A LNFPNSV+  
Sbjct: 24  SNKWVSEIR-----EPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQAELNFPNSVSSL 83

Query: 75  PVPASTSPNDIRIAAAAAAAS--------KKVDDQGENS---YHNSHYQSPPTNEFVDEE 134
           P P S SP DI+ AAA+AAA+           ++  + S     NS Y +   N F+DE+
Sbjct: 84  PAPTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQTSGVACMNSSYDNTNMNGFMDED 143

Query: 135 ALFGMPNLLHDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSY 170
            +F MPN+L +MAEGMLLSPPR     + +D   +   GD  LW++
Sbjct: 144 LVFDMPNVLMNMAEGMLLSPPRPTVFDAAYDADGF-PGGDDYLWNF 183

[Close]
BLAST of Csa3G042390 vs. TAIR10
Match: AT4G25490.1 (AT4G25490.1 C-repeat/DRE binding factor 1)

HSP 1 Score: 104.0 bits (258), Expect = 9.4e-23
Identity = 71/169 (42.01%), Postives = 91/169 (53.85%), Query Frame = 1 

Query: 15  SPRFVSHVRLIEYGSARKTNRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPNSVAFY 74
           S ++VS VR        K  RIWLGT+ T EMAA A+DVAALAL+G +A LNF +S    
Sbjct: 56  SGKWVSEVR-----EPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNFADSAWRL 115

Query: 75  PVPASTSPNDIRIAAAAAAASKKVDDQGENSYHNSH-----------YQSPPTNE---FV 134
            +P ST   DI+ AAA AA +    D+  ++   +H             +P  +E   ++
Sbjct: 116 RIPESTCAKDIQKAAAEAALA--FQDETCDTTTTNHGLDMEETMVEAIYTPEQSEGAFYM 175

Query: 135 DEEALFGMPNLLHDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSY 170
           DEE +FGMP LL +MAEGMLL PP    S   +  Y     GD +LWSY
Sbjct: 176 DEETMFGMPTLLDNMAEGMLLPPP----SVQWNHNYDGEGDGDVSLWSY 213

[Close]
BLAST of Csa3G042390 vs. TAIR10
Match: AT5G51990.1 (AT5G51990.1 C-repeat-binding factor 4)

HSP 1 Score: 98.6 bits (244), Expect = 4.0e-21
Identity = 61/160 (38.12%), Postives = 84/160 (52.50%), Query Frame = 1 

Query: 26  EYGSARKTNRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPNSVAFYPVPASTSPNDI 85
           E     K +RIWLGT+PT EMAA A+DVAALAL+G +A LNF +S     +P +T P +I
Sbjct: 68  EVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNFADSAWRLRIPETTCPKEI 127

Query: 86  RIAAAAAA--------------ASKKVDDQGENSYHNSHYQSPPTNE--FVDEEALFGMP 145
           + AA+ AA              A++  +  GE                 ++D+EAL GMP
Sbjct: 128 QKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVREGERRAEEQNGGVFYMDDEALLGMP 187

Query: 146 NLLHDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSY 170
           N   +MAEGMLL PP +       ++  ++  GD +LWS+
Sbjct: 188 NFFENMAEGMLLPPPEVG-----WNHNDFDGVGDVSLWSF 222

[Close]
BLAST of Csa3G042390 vs. NCBI nr
Match: gi|700200839|gb|KGN55972.1| (hypothetical protein Csa_3G042390 [Cucumis sativus])

HSP 1 Score: 352.4 bits (903), Expect = 4.3e-94
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1 

Query: 1   MITTKESAAGVANGSPRFVSHVRLIEYGSARKTNRIWLGTYPTPEMAAAAYDVAALALKG 60
           MITTKESAAGVANGSPRFVSHVRLIEYGSARKTNRIWLGTYPTPEMAAAAYDVAALALKG
Sbjct: 1   MITTKESAAGVANGSPRFVSHVRLIEYGSARKTNRIWLGTYPTPEMAAAAYDVAALALKG 60

Query: 61  CNAVLNFPNSVAFYPVPASTSPNDIRIAAAAAAASKKVDDQGENSYHNSHYQSPPTNEFV 120
           CNAVLNFPNSVAFYPVPASTSPNDIRIAAAAAAASKKVDDQGENSYHNSHYQSPPTNEFV
Sbjct: 61  CNAVLNFPNSVAFYPVPASTSPNDIRIAAAAAAASKKVDDQGENSYHNSHYQSPPTNEFV 120

Query: 121 DEEALFGMPNLLHDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSYH 171
           DEEALFGMPNLLHDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSYH
Sbjct: 121 DEEALFGMPNLLHDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSYH 170

[Close]
BLAST of Csa3G042390 vs. NCBI nr
Match: gi|659096218|ref|XP_008448976.1| (PREDICTED: ethylene-responsive transcription factor ERF026-like [Cucumis melo])

HSP 1 Score: 283.1 bits (723), Expect = 3.2e-73
Identity = 138/161 (85.71%), Postives = 145/161 (90.06%), Query Frame = 1 

Query: 10  GVANGSPRFVSHVRLIEYGSARKTNRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPN 69
           G+     ++VS +R       RKTNRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFP+
Sbjct: 14  GIRCRGGKWVSEIR-----EPRKTNRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPD 73

Query: 70  SVAFYPVPASTSPNDIRIAAAAAAASKKVDDQGENSYHNSHYQSPPTNEFVDEEALFGMP 129
           SVA YPVPASTSPNDIRIAAAAAAASK+VDDQGEN+YHNSHYQSPP NEFVDEEALFGMP
Sbjct: 74  SVASYPVPASTSPNDIRIAAAAAAASKRVDDQGENNYHNSHYQSPPANEFVDEEALFGMP 133

Query: 130 NLLHDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSYH 171
           NLL DMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSYH
Sbjct: 134 NLLLDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSYH 169

[Close]
BLAST of Csa3G042390 vs. NCBI nr
Match: gi|703061698|ref|XP_010086541.1| (Ethylene-responsive transcription factor [Morus notabilis])

HSP 1 Score: 167.5 bits (423), Expect = 2.0e-38
Identity = 101/178 (56.74%), Postives = 115/178 (64.61%), Query Frame = 1 

Query: 10  GVANGSPRFVSHVRLIEYGSARKTNRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPN 69
           G+   S ++VS +R       RKT RIWLGT+P PEMAAAAYDVAALALKG +AVLNFP 
Sbjct: 88  GIRCRSGKWVSEIR-----EPRKTTRIWLGTFPAPEMAAAAYDVAALALKGSDAVLNFPT 147

Query: 70  SVAFYPVPASTSPNDIRIAAAAAAASKKVDDQGENSYHNS-----HYQSPPT-------- 129
           SV  YPVPASTSP DIR AA AAAASK+ + +   +   +     H  S  T        
Sbjct: 148 SVGDYPVPASTSPGDIRSAATAAAASKRAELERRKAAREAMTASFHGDSSSTTTAELTTS 207

Query: 130 ---NEFVDEEALFGMPNLLHDMAEGMLLSPPRMNSSPSRHD-YYSWNSS-GDGNLWSY 170
               E+VDEEALFGMPNLL +MAEGMLLSPPRM  SP   D YYS  SS G  +LW Y
Sbjct: 208 YDHGEYVDEEALFGMPNLLVEMAEGMLLSPPRMMESPPPSDEYYSPGSSDGGDSLWGY 260

[Close]
BLAST of Csa3G042390 vs. NCBI nr
Match: gi|743871238|ref|XP_011033804.1| (PREDICTED: ethylene-responsive transcription factor ERF026-like [Populus euphratica])

HSP 1 Score: 167.5 bits (423), Expect = 2.0e-38
Identity = 102/183 (55.74%), Postives = 116/183 (63.39%), Query Frame = 1 

Query: 1   MITTKESAA------GVANGSPRFVSHVRLIEYGSARKTNRIWLGTYPTPEMAAAAYDVA 60
           M TT  S+       G+ + S ++VS +R       RKT RIWLGT+P PEMAAAAYDVA
Sbjct: 1   MATTSSSSKRHPLYRGIRSRSGKWVSEIR-----EPRKTTRIWLGTFPKPEMAAAAYDVA 60

Query: 61  ALALKGCNAVLNFPNSVAFYPVPASTSPNDIRIAAAAAAASKK--------VDDQGENSY 120
            LALKG +AVLNFPNSV  YPVPASTSP DIR AA AAAA KK        +D+Q  N  
Sbjct: 61  VLALKGTDAVLNFPNSVGTYPVPASTSPTDIRNAANAAAALKKAEMSYNEALDEQRRNDC 120

Query: 121 HNSHYQSPPTNEFVDEEALFGMPNLLHDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNL 170
               +      EFVDEEALF MPNLL DMA GMLLSPPR+ SSPS     S  +S   +L
Sbjct: 121 AVGTFLESGGEEFVDEEALFDMPNLLVDMAGGMLLSPPRITSSPSDD---SQGTSDGESL 175

[Close]
BLAST of Csa3G042390 vs. NCBI nr
Match: gi|702332514|ref|XP_010054789.1| (PREDICTED: ethylene-responsive transcription factor ERF025-like [Eucalyptus grandis])

HSP 1 Score: 167.2 bits (422), Expect = 2.6e-38
Identity = 96/177 (54.24%), Postives = 116/177 (65.54%), Query Frame = 1 

Query: 10  GVANGSPRFVSHVRLIEYGSARKTNRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPN 69
           G+ + S ++VS +R       RKT R+WLGTYPTPEMAAAAYDVAALALKG +AVLNFP+
Sbjct: 95  GIRSRSGKWVSEIR-----EPRKTTRVWLGTYPTPEMAAAAYDVAALALKGGDAVLNFPH 154

Query: 70  SVAFYPVPASTSPNDIRIAAAAAAASKKVDDQG-------------ENSYHNSHY----Q 129
            V  YPVPAST+P D+R AAAAAAAS+K +  G             E      H      
Sbjct: 155 LVKSYPVPASTAPTDVRRAAAAAAASRKAETSGGTDDTALLGQEGDEGKTRKDHRPDLSS 214

Query: 130 SPPTNEFVDEEALFGMPNLLHDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSY 170
            PP  EF+DEEALF MPNLL DMAEGM++SPPR++S PS     S ++S   +LWSY
Sbjct: 215 KPPEAEFIDEEALFDMPNLLVDMAEGMMVSPPRISSPPSDD---SPDNSDMESLWSY 263

The following BLAST results are available for this feature:
BLAST of Csa3G042390 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ERF26_ARATH5.5e-3350.90Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana GN=ERF02... [more]
ERF25_ARATH2.8e-3249.12Ethylene-responsive transcription factor ERF025 OS=Arabidopsis thaliana GN=ERF02... [more]
ERF27_ARATH6.8e-3147.78Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana GN=ERF02... [more]
ERF24_ARATH2.0e-3048.19Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana GN=ERF02... [more]
DRE1F_ORYSI7.5e-2244.22Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. indica ... [more]
BLAST of Csa3G042390 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5V9_CUCSA3.0e-94100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G042390 PE=4 SV=1[more]
W6FIY4_9ROSA1.4e-3856.74Dehydration responsive element binding transcription factor OS=Morus notabilis G... [more]
A0A059CI54_EUCGR1.8e-3854.24Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01924 PE=4 SV=1[more]
V4TQ11_9ROSI3.1e-3859.04Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023840mg PE=4 SV=1[more]
A0A067F854_CITSI3.1e-3857.99Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030591mg PE=4 SV=1[more]
BLAST of Csa3G042390 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G52020.11.6e-3349.12 Integrase-type DNA-binding superfamily protein[more]
AT1G12630.13.8e-3247.78 Integrase-type DNA-binding superfamily protein[more]
AT2G36450.11.1e-3148.19 Integrase-type DNA-binding superfamily protein[more]
AT4G25490.19.4e-2342.01 C-repeat/DRE binding factor 1[more]
AT5G51990.14.0e-2138.13 C-repeat-binding factor 4[more]
BLAST of Csa3G042390 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700200839|gb|KGN55972.1|4.3e-94100.00hypothetical protein Csa_3G042390 [Cucumis sativus][more]
gi|659096218|ref|XP_008448976.1|3.2e-7385.71PREDICTED: ethylene-responsive transcription factor ERF026-like [Cucumis melo][more]
gi|703061698|ref|XP_010086541.1|2.0e-3856.74Ethylene-responsive transcription factor [Morus notabilis][more]
gi|743871238|ref|XP_011033804.1|2.0e-3855.74PREDICTED: ethylene-responsive transcription factor ERF026-like [Populus euphrat... [more]
gi|702332514|ref|XP_010054789.1|2.6e-3854.24PREDICTED: ethylene-responsive transcription factor ERF025-like [Eucalyptus gran... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0019760 glucosinolate metabolic process
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0043565 sequence-specific DNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU155901cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G042390.1Csa3G042390.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU155901CU155901transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 17..69
score: 1.2
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 17..60
score: 3.
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 17..74
score: 1.
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 1..68
score: 1
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 30..70
score: 3.4
NoneNo IPR availablePANTHERPTHR31985FAMILY NOT NAMEDcoord: 31..170
score: 1.1
NoneNo IPR availablePANTHERPTHR31985:SF9ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF025-RELATEDcoord: 31..170
score: 1.1