ClCG00G000870 (gene) Watermelon (Charleston Gray)

Overview
NameClCG00G000870
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionEthylene-responsive transcription factor 1
LocationCG_Chr00 : 2999014 .. 2999526 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTCCACCACCTCCTCCAACAGACATGATCACTACAAAGGAATCCGCTGCCGGAGCGGCAAATGGGTGTCCGAGATTCGTGAGCCACGTAAGACTACCCGAATATGGCTCGGTACCTACCCTACGCCGGAGATGGCTGCTGCTGCCTACGATGTCGCCGCACTCGCACTCAAGGGTTGCAATGCTGTTCTCAACTTCCCGGAATTGATTGCCTCCTACCCGGTTCCGGCTTCCTCGTCCCCAGCCGATATCCGATTTTCTGCCGCTGCTGCTGCCGCCTTGAAAAAAGTTGATGATCAAGGACAAAACACTGACCACAGCTTTCACCACCAGTCTCTTCCAACCAATGAGTTTGTCGACGAAGAGGCGCTGTTCGGAATGCCGAATCTGCTTGTTGACATGGCCGAGGGAATGCTGTTGTCCCCACCACGAATGACCTCGTCGCCGTCCCGACATGACTACTACTCATGGAACTCAAGTGGAGATGGAAATCTTTGGAGCTACCACTAG

mRNA sequence

ATGGCCTCCACCACCTCCTCCAACAGACATGATCACTACAAAGGAATCCGCTGCCGGAGCGGCAAATGGGTGTCCGAGATTCGTGAGCCACGTAAGACTACCCGAATATGGCTCGGTACCTACCCTACGCCGGAGATGGCTGCTGCTGCCTACGATGTCGCCGCACTCGCACTCAAGGGTTGCAATGCTGTTCTCAACTTCCCGGAATTGATTGCCTCCTACCCGGTTCCGGCTTCCTCGTCCCCAGCCGATATCCGATTTTCTGCCGCTGCTGCTGCCGCCTTGAAAAAAGTTGATGATCAAGGACAAAACACTGACCACAGCTTTCACCACCAGTCTCTTCCAACCAATGAGTTTGTCGACGAAGAGGCGCTGTTCGGAATGCCGAATCTGCTTGTTGACATGGCCGAGGGAATGCTGTTGTCCCCACCACGAATGACCTCGTCGCCGTCCCGACATGACTACTACTCATGGAACTCAAGTGGAGATGGAAATCTTTGGAGCTACCACTAG

Coding sequence (CDS)

ATGGCCTCCACCACCTCCTCCAACAGACATGATCACTACAAAGGAATCCGCTGCCGGAGCGGCAAATGGGTGTCCGAGATTCGTGAGCCACGTAAGACTACCCGAATATGGCTCGGTACCTACCCTACGCCGGAGATGGCTGCTGCTGCCTACGATGTCGCCGCACTCGCACTCAAGGGTTGCAATGCTGTTCTCAACTTCCCGGAATTGATTGCCTCCTACCCGGTTCCGGCTTCCTCGTCCCCAGCCGATATCCGATTTTCTGCCGCTGCTGCTGCCGCCTTGAAAAAAGTTGATGATCAAGGACAAAACACTGACCACAGCTTTCACCACCAGTCTCTTCCAACCAATGAGTTTGTCGACGAAGAGGCGCTGTTCGGAATGCCGAATCTGCTTGTTGACATGGCCGAGGGAATGCTGTTGTCCCCACCACGAATGACCTCGTCGCCGTCCCGACATGACTACTACTCATGGAACTCAAGTGGAGATGGAAATCTTTGGAGCTACCACTAG

Protein sequence

MASTTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQNTDHSFHHQSLPTNEFVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWSYH
Homology
[Close]
BLAST of ClCG00G000870 vs. Swiss-Prot
Match: ERF25_ARATH (Ethylene-responsive transcription factor ERF025 OS=Arabidopsis thaliana GN=ERF025 PE=2 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.4e-44
Identity = 101/181 (55.80%), Postives = 118/181 (65.19%), Query Frame = 1 

Query: 3   STTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN 62
           +T  S +H  ++GIR R+GKWVSEIREPRKTTRIWLGTYP PEMAAAAYDVAALALKG +
Sbjct: 55  ATGLSGKHSIFRGIRLRNGKWVSEIREPRKTTRIWLGTYPVPEMAAAAYDVAALALKGPD 114

Query: 63  AVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQN--------------TDHS 122
           AVLNFP L  +Y  P S+S ADIR +A+ AA +K+ D  G                 + S
Sbjct: 115 AVLNFPGLALTYVAPVSNSAADIRAAASRAAEMKQPDQGGDEKVLEPVQPGKEEELEEVS 174

Query: 123 FHHQSLPTNEFVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWS 170
            +  SL   EF+DEEA+  MP LL +MAEGML+SPPRM   P+  D    N  GD NLWS
Sbjct: 175 CNSCSL---EFMDEEAMLNMPTLLTEMAEGMLMSPPRMMIHPTMEDDSPENHEGD-NLWS 231

[Close]
BLAST of ClCG00G000870 vs. Swiss-Prot
Match: ERF26_ARATH (Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana GN=ERF026 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 4.1e-44
Identity = 101/177 (57.06%), Postives = 119/177 (67.23%), Query Frame = 1 

Query: 1   MASTTSSNRHDH---YKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALA 60
           MA+ T  +R      Y+GIRCRSGKWVSEIREP+KTTR+WLGTYPTPEMAAAAYDVAALA
Sbjct: 75  MATDTDISRRKKNPVYRGIRCRSGKWVSEIREPKKTTRVWLGTYPTPEMAAAAYDVAALA 134

Query: 61  LKGCNAVLNFPELIASYPVPASSSPADIRFSAAAAAALK-----KVDDQGQNTDHSFHHQ 120
           LKG + +LNFP+ + SYP+P SSS A IR +AAAAAA +      V    +  D  +   
Sbjct: 135 LKGGDTLLNFPDSLGSYPIPLSSSAAHIRCAAAAAAATRGAAGAAVKVGQKKEDKVYDTA 194

Query: 121 SLPTNEFVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWSY 170
              T  FVDEE L  MP LL DMA+GM+++PP M S PS  D    NS G+ +LWSY
Sbjct: 195 ESSTMGFVDEEELLNMPGLLADMAKGMMVAPPWMGSPPS--DDSPENSDGE-SLWSY 248

[Close]
BLAST of ClCG00G000870 vs. Swiss-Prot
Match: ERF27_ARATH (Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana GN=ERF027 PE=2 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.7e-42
Identity = 97/187 (51.87%), Postives = 115/187 (61.50%), Query Frame = 1 

Query: 2   ASTTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGC 61
           A   S  +   Y+GIRCRSGKWVSEIREPRKTTRIWLGTYP  EMAAAAYDVAA+ALKG 
Sbjct: 8   AGLGSRRKDPVYRGIRCRSGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGR 67

Query: 62  NAVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQ------------------ 121
            AVLNFP  + SYPVP S+S ADIR +AAAAAA+K  ++  +                  
Sbjct: 68  EAVLNFPGSVGSYPVPESTSAADIRAAAAAAAAMKGCEEGEEEKKAKEKKSSSSKSRARE 127

Query: 122 -NTDHSFHHQSLPTNEFVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSG 170
            + D+     S    EF+DEE +  MPNLL +MAEGM+++PP    S    D  S  +S 
Sbjct: 128 CHVDNDVGSSSWCGTEFMDEEEVLNMPNLLANMAEGMMVAPPSWMGSRPSDD--SPENSN 187

[Close]
BLAST of ClCG00G000870 vs. Swiss-Prot
Match: ERF24_ARATH (Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana GN=ERF024 PE=2 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 2.8e-37
Identity = 89/180 (49.44%), Postives = 113/180 (62.78%), Query Frame = 1 

Query: 3   STTSSNRHDHYKGIRCR--SGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKG 62
           S  +  RH  Y+G+R R  S KWVSEIREPRK  RIWLGT+ TPEMAA AYDVAALALKG
Sbjct: 5   SKDNGGRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKG 64

Query: 63  CNAVLNFPELIASYPVPASSSPADIRFSAAAAA--------ALKKVDDQGQNTDHSFHHQ 122
             A LNFP  ++S P P S SPADI+ +AA+AA        A+   ++  Q +  +  + 
Sbjct: 65  SQAELNFPNSVSSLPAPTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQTSGVACMNS 124

Query: 123 SLPT---NEFVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWSY 170
           S      N F+DE+ +F MPN+L++MAEGMLLSPPR T   + +D   +   GD  LW++
Sbjct: 125 SYDNTNMNGFMDEDLVFDMPNVLMNMAEGMLLSPPRPTVFDAAYDADGF-PGGDDYLWNF 183

[Close]
BLAST of ClCG00G000870 vs. Swiss-Prot
Match: DRE1B_ARATH (Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana GN=DREB1B PE=2 SV=2)

HSP 1 Score: 131.0 bits (328), Expect = 1.3e-29
Identity = 83/175 (47.43%), Postives = 103/175 (58.86%), Query Frame = 1 

Query: 9   RHDHYKGIRCR-SGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNF 68
           RH  Y+G+R R SGKWVSE+REP K TRIWLGT+ T EMAA A+DVAALAL+G +A LNF
Sbjct: 44  RHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNF 103

Query: 69  PELIASYPVPASSSPADIRFSAAAAAALKKVDD--QGQNTDHSFHH-----QSLPTNE-- 128
            +      +P S+   DI+  AAA AAL   D+      T+H         +++ T E  
Sbjct: 104 ADSAWRLRIPESTCAKDIQ-KAAAEAALAFQDETCDTTTTNHGLDMEETMVEAIYTPEQS 163

Query: 129 ----FVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWSY 170
               ++DEE +FGMP LL +MAEGMLL PP    S   +  Y     GD +LWSY
Sbjct: 164 EGAFYMDEETMFGMPTLLDNMAEGMLLPPP----SVQWNHNYDGEGDGDVSLWSY 213

[Close]
BLAST of ClCG00G000870 vs. TrEMBL
Match: A0A0A0L5V9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G042390 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 5.0e-65
Identity = 126/161 (78.26%), Postives = 137/161 (85.09%), Query Frame = 1 

Query: 15  GIRCRSGKWVSEIR-----EPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPE 74
           G+   S ++VS +R       RKT RIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFP 
Sbjct: 10  GVANGSPRFVSHVRLIEYGSARKTNRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPN 69

Query: 75  LIASYPVPASSSPADIRFSAAAAAALKKVDDQGQNTDHSFHHQSLPTNEFVDEEALFGMP 134
            +A YPVPAS+SP DIR +AAAAAA KKVDDQG+N+ H+ H+QS PTNEFVDEEALFGMP
Sbjct: 70  SVAFYPVPASTSPNDIRIAAAAAAASKKVDDQGENSYHNSHYQSPPTNEFVDEEALFGMP 129

Query: 135 NLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWSYH 171
           NLL DMAEGMLLSPPRM SSPSRHDYYSWNSSGDGNLWSYH
Sbjct: 130 NLLHDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSYH 170

[Close]
BLAST of ClCG00G000870 vs. TrEMBL
Match: A0A061G5E7_THECC (Integrase-type DNA-binding superfamily protein OS=Theobroma cacao GN=TCM_016176 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.3e-52
Identity = 110/170 (64.71%), Postives = 135/170 (79.41%), Query Frame = 1 

Query: 3   STTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN 62
           +++SS +H  Y+GIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKG  
Sbjct: 65  ASSSSGKHPMYRGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGGE 124

Query: 63  AVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQ---NTDHSFHHQSLPTNEF 122
           AV+NFP  +ASYP+PAS+S ADIR +AAAAA LKK +   +    T H   ++ + T E+
Sbjct: 125 AVVNFPGSVASYPLPASTSSADIRKAAAAAALLKKAETTSEINLGTGHQAKNEEMTTQEY 184

Query: 123 VDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWSY 170
           VDE+AL  +PNLLVDMAEG+L+SPPR++S+PS  D    NS G+ +LWSY
Sbjct: 185 VDEDALLNLPNLLVDMAEGLLVSPPRISSTPS--DDSPENSDGE-SLWSY 231

[Close]
BLAST of ClCG00G000870 vs. TrEMBL
Match: W6FIY4_9ROSA (Dehydration responsive element binding transcription factor OS=Morus notabilis GN=DREB4G PE=2 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.4e-51
Identity = 117/188 (62.23%), Postives = 133/188 (70.74%), Query Frame = 1 

Query: 1   MASTTSSNRHD-HYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALK 60
           MAST+S + H   ++GIRCRSGKWVSEIREPRKTTRIWLGT+P PEMAAAAYDVAALALK
Sbjct: 73  MASTSSGSNHPARFRGIRCRSGKWVSEIREPRKTTRIWLGTFPAPEMAAAAYDVAALALK 132

Query: 61  GCNAVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQNTDH-----SFHHQSL 120
           G +AVLNFP  +  YPVPAS+SP DIR +A AAAA K+ + + +         SFH  S 
Sbjct: 133 GSDAVLNFPTSVGDYPVPASTSPGDIRSAATAAAASKRAELERRKAAREAMTASFHGDSS 192

Query: 121 PT-----------NEFVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHD-YYSWNSS- 170
            T            E+VDEEALFGMPNLLV+MAEGMLLSPPRM  SP   D YYS  SS 
Sbjct: 193 STTTAELTTSYDHGEYVDEEALFGMPNLLVEMAEGMLLSPPRMMESPPPSDEYYSPGSSD 252

[Close]
BLAST of ClCG00G000870 vs. TrEMBL
Match: A0A0F6SA15_GOSBA (APETALA2 OS=Gossypium barbadense PE=2 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 2.0e-50
Identity = 103/175 (58.86%), Postives = 131/175 (74.86%), Query Frame = 1 

Query: 3   STTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN 62
           +T+SS +H  Y+GIRCRSGKWVSEIREPRK TRIWLGTYPTPEMAAAAYDVAALALKG  
Sbjct: 2   ATSSSGKHPMYRGIRCRSGKWVSEIREPRKATRIWLGTYPTPEMAAAAYDVAALALKGSE 61

Query: 63  AVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQ--------GQNTDHSFHHQSL 122
           AV+NFP+ +ASYP+P S+S ADIR +AAAAAA+++ +++        G   +H    +  
Sbjct: 62  AVVNFPDSVASYPIPGSTSSADIRKAAAAAAAMQRGENKSSESSNLVGTVQNHVVKDEGF 121

Query: 123 PTNEFVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWSY 170
            T E+VDE+    MPNLLVDMA+G+L+SPPR++  PS  D  S ++   G+LWSY
Sbjct: 122 TTGEYVDEDVFLNMPNLLVDMAKGLLVSPPRISLIPSDDDDDSPDNCNGGSLWSY 176

[Close]
BLAST of ClCG00G000870 vs. TrEMBL
Match: B9GKP1_POPTR (AP2 domain-containing family protein OS=Populus trichocarpa GN=POPTR_0001s08740g PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 2.0e-50
Identity = 119/179 (66.48%), Postives = 134/179 (74.86%), Query Frame = 1 

Query: 3   STTSSN--RHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKG 62
           +TTSSN  RH  Y GIRCR GKWVSEIREPRKTTRIWLGT+P PEMAAAAYDVAALALKG
Sbjct: 2   ATTSSNSKRHPMYHGIRCRGGKWVSEIREPRKTTRIWLGTFPKPEMAAAAYDVAALALKG 61

Query: 63  CNAVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVD--------DQGQNTDHSFHHQ 122
             AVLNFP  + +YPVPA++S  DIR +AAAAAALKK +        DQ +N DH+    
Sbjct: 62  NGAVLNFPSSVGTYPVPATASSTDIRNAAAAAAALKKAELSYNEALVDQPRN-DHNAIGA 121

Query: 123 SLPTN--EFVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWSY 170
            L ++  EFVDEEALF MPNLLVDMA GMLLSPPR+TS PS  D    NS G+ +LWSY
Sbjct: 122 YLASSGEEFVDEEALFDMPNLLVDMAGGMLLSPPRITSPPS--DDSQGNSDGE-SLWSY 176

[Close]
BLAST of ClCG00G000870 vs. TAIR10
Match: AT5G52020.1 (AT5G52020.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 180.6 bits (457), Expect = 7.9e-46
Identity = 101/181 (55.80%), Postives = 118/181 (65.19%), Query Frame = 1 

Query: 3   STTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN 62
           +T  S +H  ++GIR R+GKWVSEIREPRKTTRIWLGTYP PEMAAAAYDVAALALKG +
Sbjct: 55  ATGLSGKHSIFRGIRLRNGKWVSEIREPRKTTRIWLGTYPVPEMAAAAYDVAALALKGPD 114

Query: 63  AVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQN--------------TDHS 122
           AVLNFP L  +Y  P S+S ADIR +A+ AA +K+ D  G                 + S
Sbjct: 115 AVLNFPGLALTYVAPVSNSAADIRAAASRAAEMKQPDQGGDEKVLEPVQPGKEEELEEVS 174

Query: 123 FHHQSLPTNEFVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWS 170
            +  SL   EF+DEEA+  MP LL +MAEGML+SPPRM   P+  D    N  GD NLWS
Sbjct: 175 CNSCSL---EFMDEEAMLNMPTLLTEMAEGMLMSPPRMMIHPTMEDDSPENHEGD-NLWS 231

[Close]
BLAST of ClCG00G000870 vs. TAIR10
Match: AT1G12630.1 (AT1G12630.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 173.7 bits (439), Expect = 9.6e-44
Identity = 97/187 (51.87%), Postives = 115/187 (61.50%), Query Frame = 1 

Query: 2   ASTTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGC 61
           A   S  +   Y+GIRCRSGKWVSEIREPRKTTRIWLGTYP  EMAAAAYDVAA+ALKG 
Sbjct: 8   AGLGSRRKDPVYRGIRCRSGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGR 67

Query: 62  NAVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQ------------------ 121
            AVLNFP  + SYPVP S+S ADIR +AAAAAA+K  ++  +                  
Sbjct: 68  EAVLNFPGSVGSYPVPESTSAADIRAAAAAAAAMKGCEEGEEEKKAKEKKSSSSKSRARE 127

Query: 122 -NTDHSFHHQSLPTNEFVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSG 170
            + D+     S    EF+DEE +  MPNLL +MAEGM+++PP    S    D  S  +S 
Sbjct: 128 CHVDNDVGSSSWCGTEFMDEEEVLNMPNLLANMAEGMMVAPPSWMGSRPSDD--SPENSN 187

[Close]
BLAST of ClCG00G000870 vs. TAIR10
Match: AT2G36450.1 (AT2G36450.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 156.4 bits (394), Expect = 1.6e-38
Identity = 89/180 (49.44%), Postives = 113/180 (62.78%), Query Frame = 1 

Query: 3   STTSSNRHDHYKGIRCR--SGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKG 62
           S  +  RH  Y+G+R R  S KWVSEIREPRK  RIWLGT+ TPEMAA AYDVAALALKG
Sbjct: 5   SKDNGGRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKG 64

Query: 63  CNAVLNFPELIASYPVPASSSPADIRFSAAAAA--------ALKKVDDQGQNTDHSFHHQ 122
             A LNFP  ++S P P S SPADI+ +AA+AA        A+   ++  Q +  +  + 
Sbjct: 65  SQAELNFPNSVSSLPAPTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQTSGVACMNS 124

Query: 123 SLPT---NEFVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWSY 170
           S      N F+DE+ +F MPN+L++MAEGMLLSPPR T   + +D   +   GD  LW++
Sbjct: 125 SYDNTNMNGFMDEDLVFDMPNVLMNMAEGMLLSPPRPTVFDAAYDADGF-PGGDDYLWNF 183

[Close]
BLAST of ClCG00G000870 vs. TAIR10
Match: AT4G25490.1 (AT4G25490.1 C-repeat/DRE binding factor 1)

HSP 1 Score: 131.0 bits (328), Expect = 7.2e-31
Identity = 83/175 (47.43%), Postives = 103/175 (58.86%), Query Frame = 1 

Query: 9   RHDHYKGIRCR-SGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNF 68
           RH  Y+G+R R SGKWVSE+REP K TRIWLGT+ T EMAA A+DVAALAL+G +A LNF
Sbjct: 44  RHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNF 103

Query: 69  PELIASYPVPASSSPADIRFSAAAAAALKKVDD--QGQNTDHSFHH-----QSLPTNE-- 128
            +      +P S+   DI+  AAA AAL   D+      T+H         +++ T E  
Sbjct: 104 ADSAWRLRIPESTCAKDIQ-KAAAEAALAFQDETCDTTTTNHGLDMEETMVEAIYTPEQS 163

Query: 129 ----FVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWSY 170
               ++DEE +FGMP LL +MAEGMLL PP    S   +  Y     GD +LWSY
Sbjct: 164 EGAFYMDEETMFGMPTLLDNMAEGMLLPPP----SVQWNHNYDGEGDGDVSLWSY 213

[Close]
BLAST of ClCG00G000870 vs. TAIR10
Match: AT4G25480.1 (AT4G25480.1 dehydration response element B1A)

HSP 1 Score: 124.0 bits (310), Expect = 8.8e-29
Identity = 77/173 (44.51%), Postives = 101/173 (58.38%), Query Frame = 1 

Query: 9   RHDHYKGIRCR-SGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNF 68
           RH  Y+G+R R SGKWV E+REP K TRIWLGT+ T EMAA A+DVAALAL+G +A LNF
Sbjct: 47  RHPIYRGVRRRNSGKWVCEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNF 106

Query: 69  PELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQNTDHSFHH-----QSLPTNE---- 128
            +      +P S+   DI+ +AA AA   + +     TDH F       +++ T E    
Sbjct: 107 ADSAWRLRIPESTCAKDIQKAAAEAALAFQDEMCDATTDHGFDMEETLVEAIYTAEQSEN 166

Query: 129 --FVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWSY 170
             ++ +EA+F MP+LL +MAEGMLL  P   S    H++       D +LWSY
Sbjct: 167 AFYMHDEAMFEMPSLLANMAEGMLLPLP---SVQWNHNHEVDGDDDDVSLWSY 216

[Close]
BLAST of ClCG00G000870 vs. NCBI nr
Match: gi|659096218|ref|XP_008448976.1| (PREDICTED: ethylene-responsive transcription factor ERF026-like [Cucumis melo])

HSP 1 Score: 307.4 bits (786), Expect = 1.6e-80
Identity = 144/168 (85.71%), Postives = 155/168 (92.26%), Query Frame = 1 

Query: 3   STTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN 62
           ++TSS RHDHYKGIRCR GKWVSEIREPRKT RIWLGTYPTPEMAAAAYDVAALALKGCN
Sbjct: 2   ASTSSKRHDHYKGIRCRGGKWVSEIREPRKTNRIWLGTYPTPEMAAAAYDVAALALKGCN 61

Query: 63  AVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQNTDHSFHHQSLPTNEFVDE 122
           AVLNFP+ +ASYPVPAS+SP DIR +AAAAAA K+VDDQG+N  H+ H+QS P NEFVDE
Sbjct: 62  AVLNFPDSVASYPVPASTSPNDIRIAAAAAAASKRVDDQGENNYHNSHYQSPPANEFVDE 121

Query: 123 EALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWSYH 171
           EALFGMPNLL+DMAEGMLLSPPRM SSPSRHDYYSWNSSGDGNLWSYH
Sbjct: 122 EALFGMPNLLLDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSYH 169

[Close]
BLAST of ClCG00G000870 vs. NCBI nr
Match: gi|700200839|gb|KGN55972.1| (hypothetical protein Csa_3G042390 [Cucumis sativus])

HSP 1 Score: 255.4 bits (651), Expect = 7.1e-65
Identity = 126/161 (78.26%), Postives = 137/161 (85.09%), Query Frame = 1 

Query: 15  GIRCRSGKWVSEIR-----EPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPE 74
           G+   S ++VS +R       RKT RIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFP 
Sbjct: 10  GVANGSPRFVSHVRLIEYGSARKTNRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPN 69

Query: 75  LIASYPVPASSSPADIRFSAAAAAALKKVDDQGQNTDHSFHHQSLPTNEFVDEEALFGMP 134
            +A YPVPAS+SP DIR +AAAAAA KKVDDQG+N+ H+ H+QS PTNEFVDEEALFGMP
Sbjct: 70  SVAFYPVPASTSPNDIRIAAAAAAASKKVDDQGENSYHNSHYQSPPTNEFVDEEALFGMP 129

Query: 135 NLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWSYH 171
           NLL DMAEGMLLSPPRM SSPSRHDYYSWNSSGDGNLWSYH
Sbjct: 130 NLLHDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSYH 170

[Close]
BLAST of ClCG00G000870 vs. NCBI nr
Match: gi|590677807|ref|XP_007040122.1| (Integrase-type DNA-binding superfamily protein [Theobroma cacao])

HSP 1 Score: 214.2 bits (544), Expect = 1.8e-52
Identity = 110/170 (64.71%), Postives = 135/170 (79.41%), Query Frame = 1 

Query: 3   STTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN 62
           +++SS +H  Y+GIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKG  
Sbjct: 65  ASSSSGKHPMYRGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGGE 124

Query: 63  AVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQ---NTDHSFHHQSLPTNEF 122
           AV+NFP  +ASYP+PAS+S ADIR +AAAAA LKK +   +    T H   ++ + T E+
Sbjct: 125 AVVNFPGSVASYPLPASTSSADIRKAAAAAALLKKAETTSEINLGTGHQAKNEEMTTQEY 184

Query: 123 VDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWSY 170
           VDE+AL  +PNLLVDMAEG+L+SPPR++S+PS  D    NS G+ +LWSY
Sbjct: 185 VDEDALLNLPNLLVDMAEGLLVSPPRISSTPS--DDSPENSDGE-SLWSY 231

[Close]
BLAST of ClCG00G000870 vs. NCBI nr
Match: gi|703061698|ref|XP_010086541.1| (Ethylene-responsive transcription factor [Morus notabilis])

HSP 1 Score: 209.9 bits (533), Expect = 3.4e-51
Identity = 117/188 (62.23%), Postives = 133/188 (70.74%), Query Frame = 1 

Query: 1   MASTTSSNRHD-HYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALK 60
           MAST+S + H   ++GIRCRSGKWVSEIREPRKTTRIWLGT+P PEMAAAAYDVAALALK
Sbjct: 73  MASTSSGSNHPARFRGIRCRSGKWVSEIREPRKTTRIWLGTFPAPEMAAAAYDVAALALK 132

Query: 61  GCNAVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQNTDH-----SFHHQSL 120
           G +AVLNFP  +  YPVPAS+SP DIR +A AAAA K+ + + +         SFH  S 
Sbjct: 133 GSDAVLNFPTSVGDYPVPASTSPGDIRSAATAAAASKRAELERRKAAREAMTASFHGDSS 192

Query: 121 PT-----------NEFVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHD-YYSWNSS- 170
            T            E+VDEEALFGMPNLLV+MAEGMLLSPPRM  SP   D YYS  SS 
Sbjct: 193 STTTAELTTSYDHGEYVDEEALFGMPNLLVEMAEGMLLSPPRMMESPPPSDEYYSPGSSD 252

[Close]
BLAST of ClCG00G000870 vs. NCBI nr
Match: gi|1009166984|ref|XP_015901879.1| (PREDICTED: ethylene-responsive transcription factor ERF027-like [Ziziphus jujuba])

HSP 1 Score: 207.6 bits (527), Expect = 1.7e-50
Identity = 113/179 (63.13%), Postives = 128/179 (71.51%), Query Frame = 1 

Query: 3   STTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN 62
           +++SS +H  YKGIRCRSGKWVSEIREPRKTTRIWLGT+PTP+MAA AYDVAALALKG +
Sbjct: 89  ASSSSGKHSRYKGIRCRSGKWVSEIREPRKTTRIWLGTFPTPDMAAVAYDVAALALKGND 148

Query: 63  AVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVD---DQGQNTDHSFHHQ------- 122
           AVLNFP L+  YPVP SSS ADIR +A AAAA K  D     G N++ S           
Sbjct: 149 AVLNFPSLVGKYPVPDSSSAADIRKAATAAAAAKMADWREGMGGNSEPSSKKDDGTLSGD 208

Query: 123 --SLPTNEFVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWSY 170
             SL   EFVDEE LFGMPNLLVDMAEGML+SPPRM+SS      Y   S G  +LW+Y
Sbjct: 209 RLSLSGGEFVDEEELFGMPNLLVDMAEGMLVSPPRMSSSDDSPGNY---SDGVESLWNY 264

The following BLAST results are available for this feature:
BLAST of ClCG00G000870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ERF25_ARATH1.4e-4455.80Ethylene-responsive transcription factor ERF025 OS=Arabidopsis thaliana GN=ERF02... [more]
ERF26_ARATH4.1e-4457.06Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana GN=ERF02... [more]
ERF27_ARATH1.7e-4251.87Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana GN=ERF02... [more]
ERF24_ARATH2.8e-3749.44Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana GN=ERF02... [more]
DRE1B_ARATH1.3e-2947.43Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana GN=DRE... [more]
BLAST of ClCG00G000870 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5V9_CUCSA5.0e-6578.26Uncharacterized protein OS=Cucumis sativus GN=Csa_3G042390 PE=4 SV=1[more]
A0A061G5E7_THECC1.3e-5264.71Integrase-type DNA-binding superfamily protein OS=Theobroma cacao GN=TCM_016176 ... [more]
W6FIY4_9ROSA2.4e-5162.23Dehydration responsive element binding transcription factor OS=Morus notabilis G... [more]
A0A0F6SA15_GOSBA2.0e-5058.86APETALA2 OS=Gossypium barbadense PE=2 SV=1[more]
B9GKP1_POPTR2.0e-5066.48AP2 domain-containing family protein OS=Populus trichocarpa GN=POPTR_0001s08740g... [more]
BLAST of ClCG00G000870 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G52020.17.9e-4655.80 Integrase-type DNA-binding superfamily protein[more]
AT1G12630.19.6e-4451.87 Integrase-type DNA-binding superfamily protein[more]
AT2G36450.11.6e-3849.44 Integrase-type DNA-binding superfamily protein[more]
AT4G25490.17.2e-3147.43 C-repeat/DRE binding factor 1[more]
AT4G25480.18.8e-2944.51 dehydration response element B1A[more]
BLAST of ClCG00G000870 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659096218|ref|XP_008448976.1|1.6e-8085.71PREDICTED: ethylene-responsive transcription factor ERF026-like [Cucumis melo][more]
gi|700200839|gb|KGN55972.1|7.1e-6578.26hypothetical protein Csa_3G042390 [Cucumis sativus][more]
gi|590677807|ref|XP_007040122.1|1.8e-5264.71Integrase-type DNA-binding superfamily protein [Theobroma cacao][more]
gi|703061698|ref|XP_010086541.1|3.4e-5162.23Ethylene-responsive transcription factor [Morus notabilis][more]
gi|1009166984|ref|XP_015901879.1|1.7e-5063.13PREDICTED: ethylene-responsive transcription factor ERF027-like [Ziziphus jujuba... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0019760 glucosinolate metabolic process
biological_process GO:0006351 transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0043565 sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG00G000870.1ClCG00G000870.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 12..69
score: 2.9
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 12..60
score: 3.4
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 12..74
score: 5.4
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 12..68
score: 19
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 12..69
score: 3.07
NoneNo IPR availablePANTHERPTHR31985FAMILY NOT NAMEDcoord: 3..170
score: 1.4
NoneNo IPR availablePANTHERPTHR31985:SF9ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF025-RELATEDcoord: 3..170
score: 1.4