Carg25221 (gene) Silver-seed gourd

Overview
NameCarg25221
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionEthylene-responsive transcription factor
LocationCucurbita_argyrosperma_scaffold_189 : 157858 .. 158361 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTCTACCTCCTCCAATAGACATGGCAACTACAAGGGAGTCCGCTGCCGGAGTGGCAAATGGGTGTCGGAGATTCGTGAGCCACGTAAGACTACTCGAATATGGCTCGGCACGTATCCAACGTCGGAGATGGCCGCTGCTGCCTACGACGTGGCTGCACTGGCTCTCAAGGGTAGCAATGCTGTTCTCAACTTCCCGGACTCGATTCGCTCCTACCCAATTCCGGCTTCCAAATCCCCAGCTGATATTCGTCTCGCTGCTGCCACTGCTGCCGCGACGAAAAAGGTTGATCAAGGAGAAAGTAATAACCCTATCTGCCACCAGTCTCCACCGTCCCATGAGTTCGTTGACGAAGAGGCACTGTTCGGAATGCCCAATTTGCTGCACGACATGGCGGAGGGAATGCTGTTGCCACCGCCACGAATGAGCGACTCGCCGTCATCACACGACTGCTACTCATGGAACTCCACCGGAGATGAAAATCTTTGGAGCTACCATTAG

mRNA sequence

ATGGCCTCTACCTCCTCCAATAGACATGGCAACTACAAGGGAGTCCGCTGCCGGAGTGGCAAATGGGTGTCGGAGATTCGTGAGCCACGTAAGACTACTCGAATATGGCTCGGCACGTATCCAACGTCGGAGATGGCCGCTGCTGCCTACGACGTGGCTGCACTGGCTCTCAAGGGTAGCAATGCTGTTCTCAACTTCCCGGACTCGATTCGCTCCTACCCAATTCCGGCTTCCAAATCCCCAGCTGATATTCGTCTCGCTGCTGCCACTGCTGCCGCGACGAAAAAGGTTGATCAAGGAGAAAGTAATAACCCTATCTGCCACCAGTCTCCACCGTCCCATGAGTTCGTTGACGAAGAGGCACTGTTCGGAATGCCCAATTTGCTGCACGACATGGCGGAGGGAATGCTGTTGCCACCGCCACGAATGAGCGACTCGCCGTCATCACACGACTGCTACTCATGGAACTCCACCGGAGATGAAAATCTTTGGAGCTACCATTAG

Coding sequence (CDS)

ATGGCCTCTACCTCCTCCAATAGACATGGCAACTACAAGGGAGTCCGCTGCCGGAGTGGCAAATGGGTGTCGGAGATTCGTGAGCCACGTAAGACTACTCGAATATGGCTCGGCACGTATCCAACGTCGGAGATGGCCGCTGCTGCCTACGACGTGGCTGCACTGGCTCTCAAGGGTAGCAATGCTGTTCTCAACTTCCCGGACTCGATTCGCTCCTACCCAATTCCGGCTTCCAAATCCCCAGCTGATATTCGTCTCGCTGCTGCCACTGCTGCCGCGACGAAAAAGGTTGATCAAGGAGAAAGTAATAACCCTATCTGCCACCAGTCTCCACCGTCCCATGAGTTCGTTGACGAAGAGGCACTGTTCGGAATGCCCAATTTGCTGCACGACATGGCGGAGGGAATGCTGTTGCCACCGCCACGAATGAGCGACTCGCCGTCATCACACGACTGCTACTCATGGAACTCCACCGGAGATGAAAATCTTTGGAGCTACCATTAG

Protein sequence

MASTSSNRHGNYKGVRCRSGKWVSEIREPRKTTRIWLGTYPTSEMAAAAYDVAALALKGSNAVLNFPDSIRSYPIPASKSPADIRLAAATAAATKKVDQGESNNPICHQSPPSHEFVDEEALFGMPNLLHDMAEGMLLPPPRMSDSPSSHDCYSWNSTGDENLWSYH
Homology
[Close]
BLAST of Carg25221 vs. NCBI nr
Match: XP_023553237.1 (ethylene-responsive transcription factor ERF027-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 334.3 bits (856), Expect = 2.3e-88
Identity = 165/168 (98.21%), Postives = 165/168 (98.21%), Query Frame = 0 

Query: 1   MASTSSNRHGNYKGVRCRSGKWVSEIREPRKTTRIWLGTYPTSEMAAAAYDVAALALKGS 60
           MASTSSNRHGNYKGVRCRSGKWVSEIREPRKTTRIWLGTYPTSEMAAAAYDVAALALKGS
Sbjct: 1   MASTSSNRHGNYKGVRCRSGKWVSEIREPRKTTRIWLGTYPTSEMAAAAYDVAALALKGS 60

Query: 61  NAVLNFPDSIRSYPIPASKSPADIRLAAATAAATKKVDQGESNNPICHQSPPSHEFVDEE 120
           NAVLNFPDSIRSYPIPASKSPADIRLAAA AAATKKVDQGESNNPICHQS PSHEFVDEE
Sbjct: 61  NAVLNFPDSIRSYPIPASKSPADIRLAAAAAAATKKVDQGESNNPICHQSTPSHEFVDEE 120

Query: 121 ALFGMPNLLHDMAEGMLL-PPPRMSDSPSSHDCYSWNSTGDENLWSYH 168
           ALFGMPNLLHDMAEGMLL PPPRMSDSPSSHDCYSWNSTGDENLWSYH
Sbjct: 121 ALFGMPNLLHDMAEGMLLPPPPRMSDSPSSHDCYSWNSTGDENLWSYH 168

[Close]
BLAST of Carg25221 vs. NCBI nr
Match: XP_022965201.1 (ethylene-responsive transcription factor ERF027-like [Cucurbita maxima])

HSP 1 Score: 319.3 bits (817), Expect = 7.7e-84
Identity = 157/167 (94.01%), Postives = 157/167 (94.01%), Query Frame = 0 

Query: 1   MASTSSNRHGNYKGVRCRSGKWVSEIREPRKTTRIWLGTYPTSEMAAAAYDVAALALKGS 60
           MASTSSNRHGNYKGVRCRSGKWVSEIREPRKTTRIWLGTYPTSEMAAAAYDVAALALKGS
Sbjct: 1   MASTSSNRHGNYKGVRCRSGKWVSEIREPRKTTRIWLGTYPTSEMAAAAYDVAALALKGS 60

Query: 61  NAVLNFPDSIRSYPIPASKSPADIRLAAATAAATKKVDQGESNNPICHQSPPSHEFVDEE 120
           NAVLNFPDSIRSYPIPASKSPADIRLAA     TKKVDQGESNN  CHQSPPS EFVDEE
Sbjct: 61  NAVLNFPDSIRSYPIPASKSPADIRLAAXXXXXTKKVDQGESNNHSCHQSPPSDEFVDEE 120

Query: 121 ALFGMPNLLHDMAEGMLLPPPRMSDSPSSHDCYSWNSTGDENLWSYH 168
           ALFGMPNLLHDMA GMLLPPPRMS SPSSHDCYSWNSTGDENLWSYH
Sbjct: 121 ALFGMPNLLHDMAVGMLLPPPRMSGSPSSHDCYSWNSTGDENLWSYH 167

[Close]
BLAST of Carg25221 vs. NCBI nr
Match: XP_022932388.1 (ethylene-responsive transcription factor ERF027-like [Cucurbita moschata])

HSP 1 Score: 287.7 bits (735), Expect = 2.5e-74
Identity = 144/167 (86.23%), Postives = 144/167 (86.23%), Query Frame = 0 

Query: 1   MASTSSNRHGNYKGVRCRSGKWVSEIREPRKTTRIWLGTYPTSEMAAAAYDVAALALKGS 60
           MASTSSNRHGNYKGVRCRSGKWVSEIREPRKTTRIWLGTYPTSEMAAAAYDVAALALKGS
Sbjct: 1   MASTSSNRHGNYKGVRCRSGKWVSEIREPRKTTRIWLGTYPTSEMAAAAYDVAALALKGS 60

Query: 61  NAVLNFPDSIRSYPIPASKSPADIRLAAATAAATKKVDQGESNNPICHQSPPSHEFVDEE 120
           NAVLNFPDSIRSYPIPASKSPADIRLA                      SPPS EFVDEE
Sbjct: 61  NAVLNFPDSIRSYPIPASKSPADIRLAXXXXXXXXXXXXXXXXXXXXXXSPPSDEFVDEE 120

Query: 121 ALFGMPNLLHDMAEGMLLPPPRMSDSPSSHDCYSWNSTGDENLWSYH 168
           ALFGMPNLLHDMAEGMLLPPPRMSDSPSSHDCYSWNSTGDENLWSYH
Sbjct: 121 ALFGMPNLLHDMAEGMLLPPPRMSDSPSSHDCYSWNSTGDENLWSYH 167

[Close]
BLAST of Carg25221 vs. NCBI nr
Match: XP_022941127.1 (ethylene-responsive transcription factor ERF026-like [Cucurbita moschata])

HSP 1 Score: 262.3 bits (669), Expect = 1.1e-66
Identity = 131/168 (77.98%), Postives = 145/168 (86.31%), Query Frame = 0 

Query: 1   MASTSSNRHGNYKGVRCRSGKWVSEIREPRKTTRIWLGTYPTSEMAAAAYDVAALALKGS 60
           MASTSSN+H +YKG+RCRSGKWVSEIREPRKTTRIWLGTYPT EMAAAAYDVA LALKG 
Sbjct: 1   MASTSSNKHHHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAVLALKGC 60

Query: 61  NAVLNFPDSIRSYPIPASKSPADIRLAAAT-AAATKKVDQGESNNPICHQSPPSHEFVDE 120
            AVLNFPDSI SYP+P S SPADIR+AAAT AAA+K++D GE +    H SPP+ EFVDE
Sbjct: 61  KAVLNFPDSIGSYPVPVSMSPADIRVAAATAAAASKRIDHGEGSYNNHHPSPPTDEFVDE 120

Query: 121 EALFGMPNLLHDMAEGMLLPPPRMSDSPSSHDCYSWNSTGDENLWSYH 168
           EALFGMPNLL DMAEGMLL PPR+S SPS H+ YSWNS+GD NLWSY+
Sbjct: 121 EALFGMPNLLVDMAEGMLLSPPRISSSPSRHEYYSWNSSGDGNLWSYY 168

[Close]
BLAST of Carg25221 vs. NCBI nr
Match: XP_023005571.1 (ethylene-responsive transcription factor ERF026-like [Cucurbita maxima])

HSP 1 Score: 262.3 bits (669), Expect = 1.1e-66
Identity = 131/167 (78.44%), Postives = 145/167 (86.83%), Query Frame = 0 

Query: 1   MASTSSNRHGNYKGVRCRSGKWVSEIREPRKTTRIWLGTYPTSEMAAAAYDVAALALKGS 60
           MASTSSN+H +YKG+RCRSGKWVSEIREPRKTTRIWLGTYPT EMAAAAYDVAALALKG 
Sbjct: 1   MASTSSNKHHHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGC 60

Query: 61  NAVLNFPDSIRSYPIPASKSPADIRLAAATAAATKKVDQGESNNPICHQSPPSHEFVDEE 120
           NAVLNFPDSI SYP+P S S  DIR+AAA AAA+K++D GE +    HQSPP+ EFVDEE
Sbjct: 61  NAVLNFPDSIGSYPVPTSMSSTDIRVAAA-AAASKRIDHGEGSYNSHHQSPPTDEFVDEE 120

Query: 121 ALFGMPNLLHDMAEGMLLPPPRMSDSPSSHDCYSWNSTGDENLWSYH 168
           ALFGMPNLL DMAEGMLL PPR+S SPS H+ YSWNS+GD NLWSY+
Sbjct: 121 ALFGMPNLLVDMAEGMLLSPPRISSSPSRHEYYSWNSSGDGNLWSYY 166

[Close]
BLAST of Carg25221 vs. TAIR10
Match: AT5G52020.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 170.6 bits (431), Expect = 8.0e-43
Identity = 98/178 (55.06%), Postives = 114/178 (64.04%), Query Frame = 0 

Query: 2   ASTSSNRHGNYKGVRCRSGKWVSEIREPRKTTRIWLGTYPTSEMAAAAYDVAALALKGSN 61
           A+  S +H  ++G+R R+GKWVSEIREPRKTTRIWLGTYP  EMAAAAYDVAALALKG +
Sbjct: 55  ATGLSGKHSIFRGIRLRNGKWVSEIREPRKTTRIWLGTYPVPEMAAAAYDVAALALKGPD 114

Query: 62  AVLNFPDSIRSYPIPASKSPADIRLAAATAAATKKVDQGESNNPICHQSPP--------- 121
           AVLNFP    +Y  P S S ADIR AA+ AA  K+ DQG     +    P          
Sbjct: 115 AVLNFPGLALTYVAPVSNSAADIRAAASRAAEMKQPDQGGDEKVLEPVQPGKEEELEEVS 174

Query: 122 ----SHEFVDEEALFGMPNLLHDMAEGMLLPPPRMSDSPSSHDCYSWNSTGDENLWSY 167
               S EF+DEEA+  MP LL +MAEGML+ PPRM   P+  D    N  GD NLWSY
Sbjct: 175 CNSCSLEFMDEEAMLNMPTLLTEMAEGMLMSPPRMMIHPTMEDDSPENHEGD-NLWSY 231

[Close]
BLAST of Carg25221 vs. TAIR10
Match: AT1G12630.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 151.4 bits (381), Expect = 5.0e-37
Identity = 87/176 (49.43%), Postives = 104/176 (59.09%), Query Frame = 0 

Query: 12  YKGVRCRSGKWVSEIREPRKTTRIWLGTYPTSEMAAAAYDVAALALKGSNAVLNFPDSIR 71
           Y+G+RCRSGKWVSEIREPRKTTRIWLGTYP +EMAAAAYDVAA+ALKG  AVLNFP S+ 
Sbjct: 19  YRGIRCRSGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGREAVLNFPGSVG 78

Query: 72  SYPIPASKSPADI---------------------RLAAATAAATKKVDQGESNNPICHQS 131
           SYP+P S S ADI                                   +   +N +   S
Sbjct: 79  SYPVPESTSAADIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARECHVDNDVGSSS 138

Query: 132 PPSHEFVDEEALFGMPNLLHDMAEGMLLPPPRMSDSPSSHDCYSWNSTGDENLWSY 167
               EF+DEE +  MPNLL +MAEGM++ PP    S  S D  S  ++ DE+LW Y
Sbjct: 139 WCGTEFMDEEEVLNMPNLLANMAEGMMVAPPSWMGSRPSDD--SPENSNDEDLWGY 192

[Close]
BLAST of Carg25221 vs. TAIR10
Match: AT2G36450.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 135.6 bits (340), Expect = 2.9e-32
Identity = 82/177 (46.33%), Postives = 105/177 (59.32%), Query Frame = 0 

Query: 5   SSNRHGNYKGVRCR--SGKWVSEIREPRKTTRIWLGTYPTSEMAAAAYDVAALALKGSNA 64
           +  RH  Y+GVR R  S KWVSEIREPRK  RIWLGT+ T EMAA AYDVAALALKGS A
Sbjct: 8   NGGRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQA 67

Query: 65  VLNFPDSIRSYPIPASKSPADIR-------------LAAATAAATKKVDQGESNNPICHQ 124
            LNFP+S+ S P P S SPADI+                   A       G +     + 
Sbjct: 68  ELNFPNSVSSLPAPTSMSPADIQXXXXXXXXXXXXXXXXIVMANNNSQTSGVACMNSSYD 127

Query: 125 SPPSHEFVDEEALFGMPNLLHDMAEGMLLPPPRMSDSPSSHDCYSWNSTGDENLWSY 167
           +   + F+DE+ +F MPN+L +MAEGMLL PPR +   +++D   +   GD+ LW++
Sbjct: 128 NTNMNGFMDEDLVFDMPNVLMNMAEGMLLSPPRPTVFDAAYDADGFPG-GDDYLWNF 183

[Close]
BLAST of Carg25221 vs. TAIR10
Match: AT4G25490.1 (C-repeat/DRE binding factor 1)

HSP 1 Score: 134.8 bits (338), Expect = 4.9e-32
Identity = 86/174 (49.43%), Postives = 106/174 (60.92%), Query Frame = 0 

Query: 8   RHGNYKGVRCR-SGKWVSEIREPRKTTRIWLGTYPTSEMAAAAYDVAALALKGSNAVLNF 67
           RH  Y+GVR R SGKWVSE+REP K TRIWLGT+ T+EMAA A+DVAALAL+G +A LNF
Sbjct: 44  RHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNF 103

Query: 68  PDSIRSYPIPASKSPADIRLAAATAAAT---KKVDQGESNNPICHQ--------SPPSHE 127
            DS     IP S    DI+ AAA AA     +  D   +N+ +  +        +P   E
Sbjct: 104 ADSAWRLRIPESTCAKDIQKAAAEAALAFQDETCDTTTTNHGLDMEETMVEAIYTPEQSE 163

Query: 128 ---FVDEEALFGMPNLLHDMAEGMLLPPPRMSDSPSSHDCYSWNSTGDENLWSY 167
              ++DEE +FGMP LL +MAEGMLLPPP    S   +  Y     GD +LWSY
Sbjct: 164 GAFYMDEETMFGMPTLLDNMAEGMLLPPP----SVQWNHNYDGEGDGDVSLWSY 213

[Close]
BLAST of Carg25221 vs. TAIR10
Match: AT5G51990.1 (C-repeat-binding factor 4)

HSP 1 Score: 127.1 bits (318), Expect = 1.0e-29
Identity = 79/178 (44.38%), Postives = 102/178 (57.30%), Query Frame = 0 

Query: 8   RHGNYKGVRCR-SGKWVSEIREPRKTTRIWLGTYPTSEMAAAAYDVAALALKGSNAVLNF 67
           RH  Y+GVR R SGKWV E+REP K +RIWLGT+PT EMAA A+DVAALAL+G +A LNF
Sbjct: 50  RHPIYRGVRQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNF 109

Query: 68  PDSIRSYPIPASKSPADIRLAAATAA-ATKKVDQGESNNPICHQSPPSHE---------- 127
            DS     IP +  P +I+ AA+ AA A +     E +         + E          
Sbjct: 110 ADSAWRLRIPETTCPKEIQKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVREGERRAE 169

Query: 128 -------FVDEEALFGMPNLLHDMAEGMLLPPPRMSDSPSSHDCYSWNSTGDENLWSY 167
                  ++D+EAL GMPN   +MAEGMLLPPP +  + +  D       GD +LWS+
Sbjct: 170 EQNGGVFYMDDEALLGMPNFFENMAEGMLLPPPEVGWNHNDFD-----GVGDVSLWSF 222

[Close]
BLAST of Carg25221 vs. Swiss-Prot
Match: sp|Q9FJ90|ERF25_ARATH (Ethylene-responsive transcription factor ERF025 OS=Arabidopsis thaliana OX=3702 GN=ERF025 PE=2 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.4e-41
Identity = 98/178 (55.06%), Postives = 114/178 (64.04%), Query Frame = 0 

Query: 2   ASTSSNRHGNYKGVRCRSGKWVSEIREPRKTTRIWLGTYPTSEMAAAAYDVAALALKGSN 61
           A+  S +H  ++G+R R+GKWVSEIREPRKTTRIWLGTYP  EMAAAAYDVAALALKG +
Sbjct: 55  ATGLSGKHSIFRGIRLRNGKWVSEIREPRKTTRIWLGTYPVPEMAAAAYDVAALALKGPD 114

Query: 62  AVLNFPDSIRSYPIPASKSPADIRLAAATAAATKKVDQGESNNPICHQSPP--------- 121
           AVLNFP    +Y  P S S ADIR AA+ AA  K+ DQG     +    P          
Sbjct: 115 AVLNFPGLALTYVAPVSNSAADIRAAASRAAEMKQPDQGGDEKVLEPVQPGKEEELEEVS 174

Query: 122 ----SHEFVDEEALFGMPNLLHDMAEGMLLPPPRMSDSPSSHDCYSWNSTGDENLWSY 167
               S EF+DEEA+  MP LL +MAEGML+ PPRM   P+  D    N  GD NLWSY
Sbjct: 175 CNSCSLEFMDEEAMLNMPTLLTEMAEGMLMSPPRMMIHPTMEDDSPENHEGD-NLWSY 231

[Close]
BLAST of Carg25221 vs. Swiss-Prot
Match: sp|Q9CAN9|ERF26_ARATH (Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana OX=3702 GN=ERF026 PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.6e-38
Identity = 91/162 (56.17%), Postives = 105/162 (64.81%), Query Frame = 0 

Query: 12  YKGVRCRSGKWVSEIREPRKTTRIWLGTYPTSEMAAAAYDVAALALKGSNAVLNFPDSIR 71
           Y+G+RCRSGKWVSEIREP+KTTR+WLGTYPT EMAAAAYDVAALALKG + +LNFPDS+ 
Sbjct: 90  YRGIRCRSGKWVSEIREPKKTTRVWLGTYPTPEMAAAAYDVAALALKGGDTLLNFPDSLG 149

Query: 72  SYPIPASKSPADIRLAAATAAATK-------KVDQGESNNPICHQSPPSHEFVDEEALFG 131
           SYPIP S S A IR                 KV Q + +         +  FVDEE L  
Sbjct: 150 SYPIPLSSSAAHIRCXXXXXXXXXXXXXXXVKVGQKKEDKVYDTAESSTMGFVDEEELLN 209

Query: 132 MPNLLHDMAEGMLLPPPRMSDSPSSHDCYSWNSTGDENLWSY 167
           MP LL DMA+GM++ PP M   PS  D    NS G E+LWSY
Sbjct: 210 MPGLLADMAKGMMVAPPWMGSPPS--DDSPENSDG-ESLWSY 248

[Close]
BLAST of Carg25221 vs. Swiss-Prot
Match: sp|Q38Q39|ERF27_ARATH (Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana OX=3702 GN=ERF027 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 9.1e-36
Identity = 87/176 (49.43%), Postives = 104/176 (59.09%), Query Frame = 0 

Query: 12  YKGVRCRSGKWVSEIREPRKTTRIWLGTYPTSEMAAAAYDVAALALKGSNAVLNFPDSIR 71
           Y+G+RCRSGKWVSEIREPRKTTRIWLGTYP +EMAAAAYDVAA+ALKG  AVLNFP S+ 
Sbjct: 19  YRGIRCRSGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGREAVLNFPGSVG 78

Query: 72  SYPIPASKSPADI---------------------RLAAATAAATKKVDQGESNNPICHQS 131
           SYP+P S S ADI                                   +   +N +   S
Sbjct: 79  SYPVPESTSAADIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARECHVDNDVGSSS 138

Query: 132 PPSHEFVDEEALFGMPNLLHDMAEGMLLPPPRMSDSPSSHDCYSWNSTGDENLWSY 167
               EF+DEE +  MPNLL +MAEGM++ PP    S  S D  S  ++ DE+LW Y
Sbjct: 139 WCGTEFMDEEEVLNMPNLLANMAEGMMVAPPSWMGSRPSDD--SPENSNDEDLWGY 192

[Close]
BLAST of Carg25221 vs. Swiss-Prot
Match: sp|Q9SJR0|ERF24_ARATH (Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana OX=3702 GN=ERF024 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 5.2e-31
Identity = 82/177 (46.33%), Postives = 105/177 (59.32%), Query Frame = 0 

Query: 5   SSNRHGNYKGVRCR--SGKWVSEIREPRKTTRIWLGTYPTSEMAAAAYDVAALALKGSNA 64
           +  RH  Y+GVR R  S KWVSEIREPRK  RIWLGT+ T EMAA AYDVAALALKGS A
Sbjct: 8   NGGRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQA 67

Query: 65  VLNFPDSIRSYPIPASKSPADIR-------------LAAATAAATKKVDQGESNNPICHQ 124
            LNFP+S+ S P P S SPADI+                   A       G +     + 
Sbjct: 68  ELNFPNSVSSLPAPTSMSPADIQXXXXXXXXXXXXXXXXIVMANNNSQTSGVACMNSSYD 127

Query: 125 SPPSHEFVDEEALFGMPNLLHDMAEGMLLPPPRMSDSPSSHDCYSWNSTGDENLWSY 167
           +   + F+DE+ +F MPN+L +MAEGMLL PPR +   +++D   +   GD+ LW++
Sbjct: 128 NTNMNGFMDEDLVFDMPNVLMNMAEGMLLSPPRPTVFDAAYDADGFPG-GDDYLWNF 183

[Close]
BLAST of Carg25221 vs. Swiss-Prot
Match: sp|P93835|DRE1B_ARATH (Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=DREB1B PE=1 SV=2)

HSP 1 Score: 134.8 bits (338), Expect = 8.8e-31
Identity = 86/174 (49.43%), Postives = 106/174 (60.92%), Query Frame = 0 

Query: 8   RHGNYKGVRCR-SGKWVSEIREPRKTTRIWLGTYPTSEMAAAAYDVAALALKGSNAVLNF 67
           RH  Y+GVR R SGKWVSE+REP K TRIWLGT+ T+EMAA A+DVAALAL+G +A LNF
Sbjct: 44  RHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNF 103

Query: 68  PDSIRSYPIPASKSPADIRLAAATAAAT---KKVDQGESNNPICHQ--------SPPSHE 127
            DS     IP S    DI+ AAA AA     +  D   +N+ +  +        +P   E
Sbjct: 104 ADSAWRLRIPESTCAKDIQKAAAEAALAFQDETCDTTTTNHGLDMEETMVEAIYTPEQSE 163

Query: 128 ---FVDEEALFGMPNLLHDMAEGMLLPPPRMSDSPSSHDCYSWNSTGDENLWSY 167
              ++DEE +FGMP LL +MAEGMLLPPP    S   +  Y     GD +LWSY
Sbjct: 164 GAFYMDEETMFGMPTLLDNMAEGMLLPPP----SVQWNHNYDGEGDGDVSLWSY 213

[Close]
BLAST of Carg25221 vs. TrEMBL
Match: tr|A0A1S3BKD7|A0A1S3BKD7_CUCME (ethylene-responsive transcription factor ERF026-like OS=Cucumis melo OX=3656 GN=LOC103490987 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.3e-60
Identity = 122/169 (72.19%), Postives = 132/169 (78.11%), Query Frame = 0 

Query: 1   MASTSSNRHGNYKGVRCRSGKWVSEIREPRKTTRIWLGTYPTSEMAAAAYDVAALALKGS 60
           MASTSS RH +YKG+RCR GKWVSEIREPRKT RIWLGTYPT EMAAAAYDVAALALKG 
Sbjct: 1   MASTSSKRHDHYKGIRCRGGKWVSEIREPRKTNRIWLGTYPTPEMAAAAYDVAALALKGC 60

Query: 61  NAVLNFPDSIRSYPIPASKSPADIRLA--AATAAATKKVDQGESNNPICHQSPPSHEFVD 120
           NAVLNFPDS+ SYP+PAS SP DIR+A                      +QSPP++EFVD
Sbjct: 61  NAVLNFPDSVASYPVPASTSPNDIRIAXXXXXXXXXXXXXXXXXXXXXXYQSPPANEFVD 120

Query: 121 EEALFGMPNLLHDMAEGMLLPPPRMSDSPSSHDCYSWNSTGDENLWSYH 168
           EEALFGMPNLL DMAEGMLL PPRM+ SPS HD YSWNS+GD NLWSYH
Sbjct: 121 EEALFGMPNLLLDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSYH 169

[Close]
BLAST of Carg25221 vs. TrEMBL
Match: tr|A0A2I4EM63|A0A2I4EM63_9ROSI (ethylene-responsive transcription factor ERF027-like OS=Juglans regia OX=51240 GN=LOC108990846 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.0e-47
Identity = 109/179 (60.89%), Postives = 130/179 (72.63%), Query Frame = 0 

Query: 1   MASTSSNRHGNYKGVRCRSGKWVSEIREPRKTTRIWLGTYPTSEMAAAAYDVAALALKGS 60
           MAS+SS+RH  Y+G+RCRSGKWVSEIREPRKTTRIWLGT+PT EMAAAAYDVAALALKG 
Sbjct: 66  MASSSSSRHPMYRGIRCRSGKWVSEIREPRKTTRIWLGTFPTPEMAAAAYDVAALALKGG 125

Query: 61  NAVLNFPDSIRSYPIPASKSPADIRLAAATAAATKKVDQGES-----------NNPICHQ 120
           +AVLNFP S+ SYP+PAS SP DIR AAA     KK +  ++            NP  H+
Sbjct: 126 DAVLNFPGSVGSYPVPASTSPLDIRNAAAXXXXLKKAESSDNQRLGQQYSRSDGNP-THE 185

Query: 121 S--PPSHEFVDEEALFGMPNLLHDMAEGMLLPPPRMSDSPSSHDCYSWNSTGDENLWSY 167
           S      EF+DEEA+FGMPNLL DMAEGML+ PPR++   SS D    +  GD++LW+Y
Sbjct: 186 SGLTSGDEFLDEEAIFGMPNLLVDMAEGMLVSPPRIN---SSDDSPGGSDGGDQSLWNY 240

[Close]
BLAST of Carg25221 vs. TrEMBL
Match: tr|A0A0A0L5V9|A0A0A0L5V9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G042390 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 3.2e-46
Identity = 103/161 (63.98%), Postives = 115/161 (71.43%), Query Frame = 0 

Query: 14  GVRCRSGKWVSEIR-----EPRKTTRIWLGTYPTSEMAAAAYDVAALALKGSNAVLNFPD 73
           GV   S ++VS +R       RKT RIWLGTYPT EMAAAAYDVAALALKG NAVLNFP+
Sbjct: 10  GVANGSPRFVSHVRLIEYGSARKTNRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPN 69

Query: 74  SIRSYPIPASKSPADIRLAAATAAATKKVDQGESNNPIC--HQSPPSHEFVDEEALFGMP 133
           S+  YP+PAS SP DIR+A                      +QSPP++EFVDEEALFGMP
Sbjct: 70  SVAFYPVPASTSPNDIRIAXXXXXXXXXXXXXXXXXXXXSHYQSPPTNEFVDEEALFGMP 129

Query: 134 NLLHDMAEGMLLPPPRMSDSPSSHDCYSWNSTGDENLWSYH 168
           NLLHDMAEGMLL PPRM+ SPS HD YSWNS+GD NLWSYH
Sbjct: 130 NLLHDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSYH 170

[Close]
BLAST of Carg25221 vs. TrEMBL
Match: tr|A0A2I4GWV2|A0A2I4GWV2_9ROSI (ethylene-responsive transcription factor ERF027 OS=Juglans regia OX=51240 GN=LOC109011571 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 9.4e-46
Identity = 105/182 (57.69%), Postives = 123/182 (67.58%), Query Frame = 0 

Query: 1   MASTSSNRHGNYKGVRCRSGKWVSEIREPRKTTRIWLGTYPTSEMAAAAYDVAALALKGS 60
           MAS+S+ +H  Y+G+RCRS KWVSEIREPRKTTRIWLGT+PT EMAAAAYDVAALAL+G 
Sbjct: 1   MASSSTGKHPMYRGIRCRSSKWVSEIREPRKTTRIWLGTFPTPEMAAAAYDVAALALRGG 60

Query: 61  NAVLNFPDSIRSYPIPASKSPADIRLAAATAAATKKVDQGESNNPICHQSPPSH------ 120
           +AVLNFP  +  YP+PAS SP DIR AA      KK +   ++ P       +H      
Sbjct: 61  DAVLNFPGLVGLYPVPASTSPLDIRSAAXXXXXLKKPESNGNSGPRLQSRCNNHDNTAHE 120

Query: 121 -------EFVDEEALFGMPNLLHDMAEGMLLPPPRMS---DSPSSHDCYSWNSTGDENLW 167
                  EFVDEEA+FGMPNLL DMAEGML+ PPR++   DSP  H     NS   ENLW
Sbjct: 121 ASIRSGEEFVDEEAIFGMPNLLVDMAEGMLVSPPRINSSDDSPGDH-----NSDSGENLW 177

[Close]
BLAST of Carg25221 vs. TrEMBL
Match: tr|A0A2N9FF12|A0A2N9FF12_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17329 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.2e-45
Identity = 106/176 (60.23%), Postives = 125/176 (71.02%), Query Frame = 0 

Query: 2   ASTSSNRHGNYKGVRCRSGKWVSEIREPRKTTRIWLGTYPTSEMAAAAYDVAALALKGSN 61
           +S S+ +H  Y+G+RCRSGKWVSEIREPRKTTRIWLGT+ T EMAAAAYDVAALALKGS+
Sbjct: 4   SSNSTGKHPMYRGIRCRSGKWVSEIREPRKTTRIWLGTFQTPEMAAAAYDVAALALKGSD 63

Query: 62  AVLNFPDSIRSYPIPASKSPADIRLAAATAAATKKVDQGESNNPICHQS----------- 121
           AVLNFP S+ +YP+PAS S  DIR AA  AAA KK +   SNN +  QS           
Sbjct: 64  AVLNFPGSVATYPVPASTSAVDIRNAATAAAALKKAEL--SNNQLLRQSQNDDSTMNAGL 123

Query: 122 PPSHEFVDEEALFGMPNLLHDMAEGMLLPPPRMSDSPSSHDCYSWNSTGDENLWSY 167
               E++DEEA+F MPNLL DMAEGML+ PPR++ S  S      NS G E+LWSY
Sbjct: 124 TSGTEYLDEEAIFDMPNLLVDMAEGMLVSPPRINSSDDS----LGNSDGGESLWSY 173

The following BLAST results are available for this feature:
BLAST of Carg25221 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023553237.12.3e-8898.21ethylene-responsive transcription factor ERF027-like [Cucurbita pepo subsp. pepo... [more]
XP_022965201.17.7e-8494.01ethylene-responsive transcription factor ERF027-like [Cucurbita maxima][more]
XP_022932388.12.5e-7486.23ethylene-responsive transcription factor ERF027-like [Cucurbita moschata][more]
XP_022941127.11.1e-6677.98ethylene-responsive transcription factor ERF026-like [Cucurbita moschata][more]
XP_023005571.11.1e-6678.44ethylene-responsive transcription factor ERF026-like [Cucurbita maxima][more]
BLAST of Carg25221 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G52020.18.0e-4355.06Integrase-type DNA-binding superfamily protein[more]
AT1G12630.15.0e-3749.43Integrase-type DNA-binding superfamily protein[more]
AT2G36450.12.9e-3246.33Integrase-type DNA-binding superfamily protein[more]
AT4G25490.14.9e-3249.43C-repeat/DRE binding factor 1[more]
AT5G51990.11.0e-2944.38C-repeat-binding factor 4[more]
BLAST of Carg25221 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FJ90|ERF25_ARATH1.4e-4155.06Ethylene-responsive transcription factor ERF025 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q9CAN9|ERF26_ARATH2.6e-3856.17Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q38Q39|ERF27_ARATH9.1e-3649.43Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q9SJR0|ERF24_ARATH5.2e-3146.33Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|P93835|DRE1B_ARATH8.8e-3149.43Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=370... [more]
BLAST of Carg25221 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BKD7|A0A1S3BKD7_CUCME1.3e-6072.19ethylene-responsive transcription factor ERF026-like OS=Cucumis melo OX=3656 GN=... [more]
tr|A0A2I4EM63|A0A2I4EM63_9ROSI1.0e-4760.89ethylene-responsive transcription factor ERF027-like OS=Juglans regia OX=51240 G... [more]
tr|A0A0A0L5V9|A0A0A0L5V9_CUCSA3.2e-4663.98Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G042390 PE=4 SV=1[more]
tr|A0A2I4GWV2|A0A2I4GWV2_9ROSI9.4e-4657.69ethylene-responsive transcription factor ERF027 OS=Juglans regia OX=51240 GN=LOC... [more]
tr|A0A2N9FF12|A0A2N9FF12_FAGSY1.2e-4560.23Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17329 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR017392AP2/ERF-transcript_factor
IPR036955AP2/ERF_dom_sf
IPR001471AP2/ERF_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg25221-RACarg25221-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 49..69
score: 56.45
coord: 12..23
score: 37.58
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 11..73
e-value: 3.8E-28
score: 109.5
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 12..59
e-value: 1.2E-10
score: 41.4
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 11..67
score: 20.152
IPR001471AP2/ERF domainCDDcd00018AP2coord: 11..69
e-value: 1.20926E-18
score: 75.0007
IPR036955AP2/ERF domain superfamilyGENE3DG3DSA:3.30.730.10coord: 11..70
e-value: 4.6E-25
score: 89.2
IPR017392AP2/ERF transcription factor ERF/PTI6PIRSFPIRSF038123PTI6coord: 2..121
e-value: 1.7E-19
score: 68.4
NoneNo IPR availablePANTHERPTHR31985:SF75ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF027coord: 7..166
NoneNo IPR availablePANTHERPTHR31985FAMILY NOT NAMEDcoord: 7..166
IPR016177DNA-binding domain superfamilySUPERFAMILYSSF54171DNA-binding domaincoord: 12..69