CmoCh06G007280 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh06G007280
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description(Dehydration responsive element binding transcription factor) (Ethylene-responsive transcription factor)
LocationCmo_Chr06 : 3732966 .. 3733472 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTCTACCTCCTCCAACAAGCATCATCACTACAAGGGAATCCGCTGCCGGAGCGGGAAATGGGTGTCGGAGATTCGAGAGCCCCGTAAGACGACTCGAATATGGCTCGGTACTTACCCTACTCCGGAGATGGCTGCTGCTGCCTACGACGTGGCTGTGCTTGCTCTAAAGGGTTGCAAAGCTGTTCTCAACTTCCCCGACTCCATTGGGTCGTACCCGGTTCCGGTTTCCATGTCCCCGGCTGATATTCGTGTCGCTGCTGCTACTGCTGCCGCTGCATCTAAAAGAATTGACCATGGAGAAGGAAGTTACAATAATCACCACCCATCTCCACCAACTGACGAGTTCGTCGACGAAGAGGCGCTTTTTGGAATGCCGAATCTACTCGTTGACATGGCGGAGGGAATGCTGTTGTCGCCGCCACGAATTAGCTCATCGCCGTCTCGACATGAGTATTACTCGTGGAACTCGAGTGGAGATGGGAATCTATGGAGCTACTATTAG

mRNA sequence

ATGGCCTCTACCTCCTCCAACAAGCATCATCACTACAAGGGAATCCGCTGCCGGAGCGGGAAATGGGTGTCGGAGATTCGAGAGCCCCGTAAGACGACTCGAATATGGCTCGGTACTTACCCTACTCCGGAGATGGCTGCTGCTGCCTACGACGTGGCTGTGCTTGCTCTAAAGGGTTGCAAAGCTGTTCTCAACTTCCCCGACTCCATTGGGTCGTACCCGGTTCCGGTTTCCATGTCCCCGGCTGATATTCGTGTCGCTGCTGCTACTGCTGCCGCTGCATCTAAAAGAATTGACCATGGAGAAGGAAGTTACAATAATCACCACCCATCTCCACCAACTGACGAGTTCGTCGACGAAGAGGCGCTTTTTGGAATGCCGAATCTACTCGTTGACATGGCGGAGGGAATGCTGTTGTCGCCGCCACGAATTAGCTCATCGCCGTCTCGACATGAGTATTACTCGTGGAACTCGAGTGGAGATGGGAATCTATGGAGCTACTATTAG

Coding sequence (CDS)

ATGGCCTCTACCTCCTCCAACAAGCATCATCACTACAAGGGAATCCGCTGCCGGAGCGGGAAATGGGTGTCGGAGATTCGAGAGCCCCGTAAGACGACTCGAATATGGCTCGGTACTTACCCTACTCCGGAGATGGCTGCTGCTGCCTACGACGTGGCTGTGCTTGCTCTAAAGGGTTGCAAAGCTGTTCTCAACTTCCCCGACTCCATTGGGTCGTACCCGGTTCCGGTTTCCATGTCCCCGGCTGATATTCGTGTCGCTGCTGCTACTGCTGCCGCTGCATCTAAAAGAATTGACCATGGAGAAGGAAGTTACAATAATCACCACCCATCTCCACCAACTGACGAGTTCGTCGACGAAGAGGCGCTTTTTGGAATGCCGAATCTACTCGTTGACATGGCGGAGGGAATGCTGTTGTCGCCGCCACGAATTAGCTCATCGCCGTCTCGACATGAGTATTACTCGTGGAACTCGAGTGGAGATGGGAATCTATGGAGCTACTATTAG
Homology
[Close]
BLAST of CmoCh06G007280 vs. Swiss-Prot
Match: ERF26_ARATH (Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana GN=ERF026 PE=2 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 6.4e-42
Identity = 97/166 (58.43%), Postives = 118/166 (71.08%), Query Frame = 1 

Query: 8   KHHHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAVLALKGCKAVLNFP 67
           K+  Y+GIRCRSGKWVSEIREP+KTTR+WLGTYPTPEMAAAAYDVA LALKG   +LNFP
Sbjct: 86  KNPVYRGIRCRSGKWVSEIREPKKTTRVWLGTYPTPEMAAAAYDVAALALKGGDTLLNFP 145

Query: 68  DSIGSYPVPVSMSPADIRVAAATAA----AASKRIDHGEGSYNNHHPS--PPTDEFVDEE 127
           DS+GSYP+P+S S A IR AAA AA    AA   +  G+   +  + +    T  FVDEE
Sbjct: 146 DSLGSYPIPLSSSAAHIRCAAAAAAATRGAAGAAVKVGQKKEDKVYDTAESSTMGFVDEE 205

Query: 128 ALFGMPNLLVDMAEGMLLSPPRISSSPSRHEYYSWNSSGDGNLWSY 168
            L  MP LL DMA+GM+++PP + S PS  +    NS G+ +LWSY
Sbjct: 206 ELLNMPGLLADMAKGMMVAPPWMGSPPS--DDSPENSDGE-SLWSY 248

[Close]
BLAST of CmoCh06G007280 vs. Swiss-Prot
Match: ERF25_ARATH (Ethylene-responsive transcription factor ERF025 OS=Arabidopsis thaliana GN=ERF025 PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.1e-40
Identity = 101/180 (56.11%), Postives = 116/180 (64.44%), Query Frame = 1 

Query: 2   ASTSSNKHHHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAVLALKGCK 61
           A+  S KH  ++GIR R+GKWVSEIREPRKTTRIWLGTYP PEMAAAAYDVA LALKG  
Sbjct: 55  ATGLSGKHSIFRGIRLRNGKWVSEIREPRKTTRIWLGTYPVPEMAAAAYDVAALALKGPD 114

Query: 62  AVLNFPDSIGSYPVPVSMSPADIRVAAATAAAASKRIDHGEGSYNNHHPSPP-------- 121
           AVLNFP    +Y  PVS S ADIR AAA+ AA  K+ D G G      P  P        
Sbjct: 115 AVLNFPGLALTYVAPVSNSAADIR-AAASRAAEMKQPDQG-GDEKVLEPVQPGKEEELEE 174

Query: 122 ------TDEFVDEEALFGMPNLLVDMAEGMLLSPPRISSSPSRHEYYSWNSSGDGNLWSY 168
                 + EF+DEEA+  MP LL +MAEGML+SPPR+   P+  +    N  GD NLWSY
Sbjct: 175 VSCNSCSLEFMDEEAMLNMPTLLTEMAEGMLMSPPRMMIHPTMEDDSPENHEGD-NLWSY 231

[Close]
BLAST of CmoCh06G007280 vs. Swiss-Prot
Match: ERF27_ARATH (Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana GN=ERF027 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 6.0e-40
Identity = 100/184 (54.35%), Postives = 114/184 (61.96%), Query Frame = 1 

Query: 5   SSNKHHHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAVLALKGCKAVL 64
           S  K   Y+GIRCRSGKWVSEIREPRKTTRIWLGTYP  EMAAAAYDVA +ALKG +AVL
Sbjct: 12  SRRKDPVYRGIRCRSGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGREAVL 71

Query: 65  NFPDSIGSYPVPVSMSPADIRVAAATAAAASKRIDHGEGSYNNHHPSPPTD--------- 124
           NFP S+GSYPVP S S ADIR AAA AAAA K  + GE           +          
Sbjct: 72  NFPGSVGSYPVPESTSAADIR-AAAAAAAAMKGCEEGEEEKKAKEKKSSSSKSRARECHV 131

Query: 125 ------------EFVDEEALFGMPNLLVDMAEGMLLSPPRISSSPSRHEYYSWNSSGDGN 168
                       EF+DEE +  MPNLL +MAEGM+++PP  S   SR    S  +S D +
Sbjct: 132 DNDVGSSSWCGTEFMDEEEVLNMPNLLANMAEGMMVAPP--SWMGSRPSDDSPENSNDED 191

[Close]
BLAST of CmoCh06G007280 vs. Swiss-Prot
Match: ERF24_ARATH (Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana GN=ERF024 PE=2 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.1e-36
Identity = 87/177 (49.15%), Postives = 115/177 (64.97%), Query Frame = 1 

Query: 5   SSNKHHHYKGIRCR--SGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAVLALKGCKA 64
           +  +H  Y+G+R R  S KWVSEIREPRK  RIWLGT+ TPEMAA AYDVA LALKG +A
Sbjct: 8   NGGRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQA 67

Query: 65  VLNFPDSIGSYPVPVSMSPADIRVAAATAAAA------------SKRIDHGEGSYNNHHP 124
            LNFP+S+ S P P SMSPADI+ AAA+AAAA            +     G    N+ + 
Sbjct: 68  ELNFPNSVSSLPAPTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQTSGVACMNSSYD 127

Query: 125 SPPTDEFVDEEALFGMPNLLVDMAEGMLLSPPRISSSPSRHEYYSWNSSGDGNLWSY 168
           +   + F+DE+ +F MPN+L++MAEGMLLSPPR +   + ++   +   GD  LW++
Sbjct: 128 NTNMNGFMDEDLVFDMPNVLMNMAEGMLLSPPRPTVFDAAYDADGF-PGGDDYLWNF 183

[Close]
BLAST of CmoCh06G007280 vs. Swiss-Prot
Match: DRE1B_ARATH (Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana GN=DREB1B PE=2 SV=2)

HSP 1 Score: 127.9 bits (320), Expect = 1.1e-28
Identity = 82/174 (47.13%), Postives = 103/174 (59.20%), Query Frame = 1 

Query: 8   KHHHYKGIRCR-SGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAVLALKGCKAVLNF 67
           +H  Y+G+R R SGKWVSE+REP K TRIWLGT+ T EMAA A+DVA LAL+G  A LNF
Sbjct: 44  RHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNF 103

Query: 68  PDSIGSYPVPVSMSPADIRVAAATAAAA-------SKRIDHG---EGSYNNHHPSPPTDE 127
            DS     +P S    DI+ AAA AA A       +   +HG   E +      +P   E
Sbjct: 104 ADSAWRLRIPESTCAKDIQKAAAEAALAFQDETCDTTTTNHGLDMEETMVEAIYTPEQSE 163

Query: 128 ---FVDEEALFGMPNLLVDMAEGMLLSPPRISSSPSRHEYYSWNSSGDGNLWSY 168
              ++DEE +FGMP LL +MAEGMLL PP +  + +    Y     GD +LWSY
Sbjct: 164 GAFYMDEETMFGMPTLLDNMAEGMLLPPPSVQWNHN----YDGEGDGDVSLWSY 213

[Close]
BLAST of CmoCh06G007280 vs. TrEMBL
Match: A0A0A0L5V9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G042390 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 9.9e-58
Identity = 117/161 (72.67%), Postives = 132/161 (81.99%), Query Frame = 1 

Query: 14  GIRCRSGKWVSEIR-----EPRKTTRIWLGTYPTPEMAAAAYDVAVLALKGCKAVLNFPD 73
           G+   S ++VS +R       RKT RIWLGTYPTPEMAAAAYDVA LALKGC AVLNFP+
Sbjct: 10  GVANGSPRFVSHVRLIEYGSARKTNRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPN 69

Query: 74  SIGSYPVPVSMSPADIRVAAATAAAASKRIDHGEGSY-NNHHPSPPTDEFVDEEALFGMP 133
           S+  YPVP S SP DIR+AAA AAA+ K  D GE SY N+H+ SPPT+EFVDEEALFGMP
Sbjct: 70  SVAFYPVPASTSPNDIRIAAAAAAASKKVDDQGENSYHNSHYQSPPTNEFVDEEALFGMP 129

Query: 134 NLLVDMAEGMLLSPPRISSSPSRHEYYSWNSSGDGNLWSYY 169
           NLL DMAEGMLLSPPR++SSPSRH+YYSWNSSGDGNLWSY+
Sbjct: 130 NLLHDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSYH 170

[Close]
BLAST of CmoCh06G007280 vs. TrEMBL
Match: W6FIY4_9ROSA (Dehydration responsive element binding transcription factor OS=Morus notabilis GN=DREB4G PE=2 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.7e-49
Identity = 120/190 (63.16%), Postives = 133/190 (70.00%), Query Frame = 1 

Query: 1   MASTSSNKHH--HYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAVLALK 60
           MASTSS  +H   ++GIRCRSGKWVSEIREPRKTTRIWLGT+P PEMAAAAYDVA LALK
Sbjct: 73  MASTSSGSNHPARFRGIRCRSGKWVSEIREPRKTTRIWLGTFPAPEMAAAAYDVAALALK 132

Query: 61  GCKAVLNFPDSIGSYPVPVSMSPADIRVAAATAAAASKRID---------------HGEG 120
           G  AVLNFP S+G YPVP S SP DIR +AATAAAASKR +               HG+ 
Sbjct: 133 GSDAVLNFPTSVGDYPVPASTSPGDIR-SAATAAAASKRAELERRKAAREAMTASFHGDS 192

Query: 121 SYNNH---HPSPPTDEFVDEEALFGMPNLLVDMAEGMLLSPPR-ISSSPSRHEYYSWNSS 169
           S         S    E+VDEEALFGMPNLLV+MAEGMLLSPPR + S P   EYYS  SS
Sbjct: 193 SSTTTAELTTSYDHGEYVDEEALFGMPNLLVEMAEGMLLSPPRMMESPPPSDEYYSPGSS 252

[Close]
BLAST of CmoCh06G007280 vs. TrEMBL
Match: A0A061G5E7_THECC (Integrase-type DNA-binding superfamily protein OS=Theobroma cacao GN=TCM_016176 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 8.4e-49
Identity = 111/171 (64.91%), Postives = 128/171 (74.85%), Query Frame = 1 

Query: 1   MASTSSNKHHHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAVLALKGC 60
           MAS+SS KH  Y+GIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVA LALKG 
Sbjct: 64  MASSSSGKHPMYRGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGG 123

Query: 61  KAVLNFPDSIGSYPVPVSMSPADIRVAAATAAAASKRIDHGEGSYNNHHPSP----PTDE 120
           +AV+NFP S+ SYP+P S S ADIR AAA AA   K     E +    H +      T E
Sbjct: 124 EAVVNFPGSVASYPLPASTSSADIRKAAAAAALLKKAETTSEINLGTGHQAKNEEMTTQE 183

Query: 121 FVDEEALFGMPNLLVDMAEGMLLSPPRISSSPSRHEYYSWNSSGDGNLWSY 168
           +VDE+AL  +PNLLVDMAEG+L+SPPRISS+PS  +    NS G+ +LWSY
Sbjct: 184 YVDEDALLNLPNLLVDMAEGLLVSPPRISSTPS--DDSPENSDGE-SLWSY 231

[Close]
BLAST of CmoCh06G007280 vs. TrEMBL
Match: A0A0D2RNQ4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G162600 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.4e-48
Identity = 110/176 (62.50%), Postives = 126/176 (71.59%), Query Frame = 1 

Query: 1   MASTSSNKHHHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAVLALKGC 60
           MAS+SS KH  Y+GIRCRSGKWVSEIREPRK TRIWLGTYPTPEMAAAAYDVA LALKG 
Sbjct: 1   MASSSSGKHPMYRGIRCRSGKWVSEIREPRKATRIWLGTYPTPEMAAAAYDVAALALKGS 60

Query: 61  KAVLNFPDSIGSYPVPVSMSPADIRVAAATAAAASKRIDHGEGSYN------NH---HPS 120
           +AV+NFPDS+GSYP+P S S ADIR AAA AAA  +  +    S N      NH      
Sbjct: 61  EAVVNFPDSVGSYPIPGSTSSADIRKAAAAAAAMKRGENKSSESSNLVATVQNHVVKDEG 120

Query: 121 PPTDEFVDEEALFGMPNLLVDMAEGMLLSPPRISSSPSRHEYYSWNSSGDGNLWSY 168
             T E+VDE+    MPNLLVDMA G+L+SPPRIS  PS  +  S ++   G+LWSY
Sbjct: 121 FTTGEYVDEDVFLNMPNLLVDMANGLLVSPPRISLIPSDDDDDSPDNCNGGSLWSY 176

[Close]
BLAST of CmoCh06G007280 vs. TrEMBL
Match: A0A0F6SA15_GOSBA (APETALA2 OS=Gossypium barbadense PE=2 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.2e-47
Identity = 108/176 (61.36%), Postives = 126/176 (71.59%), Query Frame = 1 

Query: 1   MASTSSNKHHHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAVLALKGC 60
           MA++SS KH  Y+GIRCRSGKWVSEIREPRK TRIWLGTYPTPEMAAAAYDVA LALKG 
Sbjct: 1   MATSSSGKHPMYRGIRCRSGKWVSEIREPRKATRIWLGTYPTPEMAAAAYDVAALALKGS 60

Query: 61  KAVLNFPDSIGSYPVPVSMSPADIRVAAATAAA------ASKRIDHGEGSYNNH---HPS 120
           +AV+NFPDS+ SYP+P S S ADIR AAA AAA       S    +  G+  NH      
Sbjct: 61  EAVVNFPDSVASYPIPGSTSSADIRKAAAAAAAMQRGENKSSESSNLVGTVQNHVVKDEG 120

Query: 121 PPTDEFVDEEALFGMPNLLVDMAEGMLLSPPRISSSPSRHEYYSWNSSGDGNLWSY 168
             T E+VDE+    MPNLLVDMA+G+L+SPPRIS  PS  +  S ++   G+LWSY
Sbjct: 121 FTTGEYVDEDVFLNMPNLLVDMAKGLLVSPPRISLIPSDDDDDSPDNCNGGSLWSY 176

[Close]
BLAST of CmoCh06G007280 vs. TAIR10
Match: AT5G52020.1 (AT5G52020.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 166.8 bits (421), Expect = 1.2e-41
Identity = 101/180 (56.11%), Postives = 116/180 (64.44%), Query Frame = 1 

Query: 2   ASTSSNKHHHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAVLALKGCK 61
           A+  S KH  ++GIR R+GKWVSEIREPRKTTRIWLGTYP PEMAAAAYDVA LALKG  
Sbjct: 55  ATGLSGKHSIFRGIRLRNGKWVSEIREPRKTTRIWLGTYPVPEMAAAAYDVAALALKGPD 114

Query: 62  AVLNFPDSIGSYPVPVSMSPADIRVAAATAAAASKRIDHGEGSYNNHHPSPP-------- 121
           AVLNFP    +Y  PVS S ADIR AAA+ AA  K+ D G G      P  P        
Sbjct: 115 AVLNFPGLALTYVAPVSNSAADIR-AAASRAAEMKQPDQG-GDEKVLEPVQPGKEEELEE 174

Query: 122 ------TDEFVDEEALFGMPNLLVDMAEGMLLSPPRISSSPSRHEYYSWNSSGDGNLWSY 168
                 + EF+DEEA+  MP LL +MAEGML+SPPR+   P+  +    N  GD NLWSY
Sbjct: 175 VSCNSCSLEFMDEEAMLNMPTLLTEMAEGMLMSPPRMMIHPTMEDDSPENHEGD-NLWSY 231

[Close]
BLAST of CmoCh06G007280 vs. TAIR10
Match: AT1G12630.1 (AT1G12630.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 165.2 bits (417), Expect = 3.4e-41
Identity = 100/184 (54.35%), Postives = 114/184 (61.96%), Query Frame = 1 

Query: 5   SSNKHHHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAVLALKGCKAVL 64
           S  K   Y+GIRCRSGKWVSEIREPRKTTRIWLGTYP  EMAAAAYDVA +ALKG +AVL
Sbjct: 12  SRRKDPVYRGIRCRSGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGREAVL 71

Query: 65  NFPDSIGSYPVPVSMSPADIRVAAATAAAASKRIDHGEGSYNNHHPSPPTD--------- 124
           NFP S+GSYPVP S S ADIR AAA AAAA K  + GE           +          
Sbjct: 72  NFPGSVGSYPVPESTSAADIR-AAAAAAAAMKGCEEGEEEKKAKEKKSSSSKSRARECHV 131

Query: 125 ------------EFVDEEALFGMPNLLVDMAEGMLLSPPRISSSPSRHEYYSWNSSGDGN 168
                       EF+DEE +  MPNLL +MAEGM+++PP  S   SR    S  +S D +
Sbjct: 132 DNDVGSSSWCGTEFMDEEEVLNMPNLLANMAEGMMVAPP--SWMGSRPSDDSPENSNDED 191

[Close]
BLAST of CmoCh06G007280 vs. TAIR10
Match: AT2G36450.1 (AT2G36450.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 152.9 bits (385), Expect = 1.7e-37
Identity = 87/177 (49.15%), Postives = 115/177 (64.97%), Query Frame = 1 

Query: 5   SSNKHHHYKGIRCR--SGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAVLALKGCKA 64
           +  +H  Y+G+R R  S KWVSEIREPRK  RIWLGT+ TPEMAA AYDVA LALKG +A
Sbjct: 8   NGGRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQA 67

Query: 65  VLNFPDSIGSYPVPVSMSPADIRVAAATAAAA------------SKRIDHGEGSYNNHHP 124
            LNFP+S+ S P P SMSPADI+ AAA+AAAA            +     G    N+ + 
Sbjct: 68  ELNFPNSVSSLPAPTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQTSGVACMNSSYD 127

Query: 125 SPPTDEFVDEEALFGMPNLLVDMAEGMLLSPPRISSSPSRHEYYSWNSSGDGNLWSY 168
           +   + F+DE+ +F MPN+L++MAEGMLLSPPR +   + ++   +   GD  LW++
Sbjct: 128 NTNMNGFMDEDLVFDMPNVLMNMAEGMLLSPPRPTVFDAAYDADGF-PGGDDYLWNF 183

[Close]
BLAST of CmoCh06G007280 vs. TAIR10
Match: AT4G25490.1 (AT4G25490.1 C-repeat/DRE binding factor 1)

HSP 1 Score: 127.9 bits (320), Expect = 6.0e-30
Identity = 82/174 (47.13%), Postives = 103/174 (59.20%), Query Frame = 1 

Query: 8   KHHHYKGIRCR-SGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAVLALKGCKAVLNF 67
           +H  Y+G+R R SGKWVSE+REP K TRIWLGT+ T EMAA A+DVA LAL+G  A LNF
Sbjct: 44  RHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNF 103

Query: 68  PDSIGSYPVPVSMSPADIRVAAATAAAA-------SKRIDHG---EGSYNNHHPSPPTDE 127
            DS     +P S    DI+ AAA AA A       +   +HG   E +      +P   E
Sbjct: 104 ADSAWRLRIPESTCAKDIQKAAAEAALAFQDETCDTTTTNHGLDMEETMVEAIYTPEQSE 163

Query: 128 ---FVDEEALFGMPNLLVDMAEGMLLSPPRISSSPSRHEYYSWNSSGDGNLWSY 168
              ++DEE +FGMP LL +MAEGMLL PP +  + +    Y     GD +LWSY
Sbjct: 164 GAFYMDEETMFGMPTLLDNMAEGMLLPPPSVQWNHN----YDGEGDGDVSLWSY 213

[Close]
BLAST of CmoCh06G007280 vs. TAIR10
Match: AT5G51990.1 (AT5G51990.1 C-repeat-binding factor 4)

HSP 1 Score: 122.9 bits (307), Expect = 1.9e-28
Identity = 75/178 (42.13%), Postives = 99/178 (55.62%), Query Frame = 1 

Query: 8   KHHHYKGIRCR-SGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAVLALKGCKAVLNF 67
           +H  Y+G+R R SGKWV E+REP K +RIWLGT+PT EMAA A+DVA LAL+G  A LNF
Sbjct: 50  RHPIYRGVRQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNF 109

Query: 68  PDSIGSYPVPVSMSPADIRVAAATAAAASKRIDHGEGSYNNHHPSPPTDE---------- 127
            DS     +P +  P +I+ AA+ AA A +     EGS           E          
Sbjct: 110 ADSAWRLRIPETTCPKEIQKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVREGERRAE 169

Query: 128 -------FVDEEALFGMPNLLVDMAEGMLLSPPRISSSPSRHEYYSWNSSGDGNLWSY 168
                  ++D+EAL GMPN   +MAEGMLL PP +        +  ++  GD +LWS+
Sbjct: 170 EQNGGVFYMDDEALLGMPNFFENMAEGMLLPPPEVG-----WNHNDFDGVGDVSLWSF 222

[Close]
BLAST of CmoCh06G007280 vs. NCBI nr
Match: gi|659096218|ref|XP_008448976.1| (PREDICTED: ethylene-responsive transcription factor ERF026-like [Cucumis melo])

HSP 1 Score: 282.7 bits (722), Expect = 4.1e-73
Identity = 136/169 (80.47%), Postives = 150/169 (88.76%), Query Frame = 1 

Query: 1   MASTSSNKHHHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAVLALKGC 60
           MASTSS +H HYKGIRCR GKWVSEIREPRKT RIWLGTYPTPEMAAAAYDVA LALKGC
Sbjct: 1   MASTSSKRHDHYKGIRCRGGKWVSEIREPRKTNRIWLGTYPTPEMAAAAYDVAALALKGC 60

Query: 61  KAVLNFPDSIGSYPVPVSMSPADIRVAAATAAAASKRIDHGEGSY-NNHHPSPPTDEFVD 120
            AVLNFPDS+ SYPVP S SP DIR+AAA AAA+ +  D GE +Y N+H+ SPP +EFVD
Sbjct: 61  NAVLNFPDSVASYPVPASTSPNDIRIAAAAAAASKRVDDQGENNYHNSHYQSPPANEFVD 120

Query: 121 EEALFGMPNLLVDMAEGMLLSPPRISSSPSRHEYYSWNSSGDGNLWSYY 169
           EEALFGMPNLL+DMAEGMLLSPPR++SSPSRH+YYSWNSSGDGNLWSY+
Sbjct: 121 EEALFGMPNLLLDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSYH 169

[Close]
BLAST of CmoCh06G007280 vs. NCBI nr
Match: gi|700200839|gb|KGN55972.1| (hypothetical protein Csa_3G042390 [Cucumis sativus])

HSP 1 Score: 231.1 bits (588), Expect = 1.4e-57
Identity = 117/161 (72.67%), Postives = 132/161 (81.99%), Query Frame = 1 

Query: 14  GIRCRSGKWVSEIR-----EPRKTTRIWLGTYPTPEMAAAAYDVAVLALKGCKAVLNFPD 73
           G+   S ++VS +R       RKT RIWLGTYPTPEMAAAAYDVA LALKGC AVLNFP+
Sbjct: 10  GVANGSPRFVSHVRLIEYGSARKTNRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPN 69

Query: 74  SIGSYPVPVSMSPADIRVAAATAAAASKRIDHGEGSY-NNHHPSPPTDEFVDEEALFGMP 133
           S+  YPVP S SP DIR+AAA AAA+ K  D GE SY N+H+ SPPT+EFVDEEALFGMP
Sbjct: 70  SVAFYPVPASTSPNDIRIAAAAAAASKKVDDQGENSYHNSHYQSPPTNEFVDEEALFGMP 129

Query: 134 NLLVDMAEGMLLSPPRISSSPSRHEYYSWNSSGDGNLWSYY 169
           NLL DMAEGMLLSPPR++SSPSRH+YYSWNSSGDGNLWSY+
Sbjct: 130 NLLHDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSYH 170

[Close]
BLAST of CmoCh06G007280 vs. NCBI nr
Match: gi|1009166984|ref|XP_015901879.1| (PREDICTED: ethylene-responsive transcription factor ERF027-like [Ziziphus jujuba])

HSP 1 Score: 208.0 bits (528), Expect = 1.3e-50
Identity = 118/181 (65.19%), Postives = 127/181 (70.17%), Query Frame = 1 

Query: 1   MASTSSNKHHHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAVLALKGC 60
           MAS+SS KH  YKGIRCRSGKWVSEIREPRKTTRIWLGT+PTP+MAA AYDVA LALKG 
Sbjct: 88  MASSSSGKHSRYKGIRCRSGKWVSEIREPRKTTRIWLGTFPTPDMAAVAYDVAALALKGN 147

Query: 61  KAVLNFPDSIGSYPVPVSMSPADIRVAAATAAAASKRIDHGEGSYNNHHPSPPTD----- 120
            AVLNFP  +G YPVP S S ADIR  AATAAAA+K  D  EG   N  PS   D     
Sbjct: 148 DAVLNFPSLVGKYPVPDSSSAADIR-KAATAAAAAKMADWREGMGGNSEPSSKKDDGTLS 207

Query: 121 ---------EFVDEEALFGMPNLLVDMAEGMLLSPPRISSSPSRHEYYSWNSSGDGNLWS 168
                    EFVDEE LFGMPNLLVDMAEGML+SPPR+SSS      Y   S G  +LW+
Sbjct: 208 GDRLSLSGGEFVDEEELFGMPNLLVDMAEGMLVSPPRMSSSDDSPGNY---SDGVESLWN 264

[Close]
BLAST of CmoCh06G007280 vs. NCBI nr
Match: gi|703061698|ref|XP_010086541.1| (Ethylene-responsive transcription factor [Morus notabilis])

HSP 1 Score: 203.8 bits (517), Expect = 2.4e-49
Identity = 120/190 (63.16%), Postives = 133/190 (70.00%), Query Frame = 1 

Query: 1   MASTSSNKHH--HYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAVLALK 60
           MASTSS  +H   ++GIRCRSGKWVSEIREPRKTTRIWLGT+P PEMAAAAYDVA LALK
Sbjct: 73  MASTSSGSNHPARFRGIRCRSGKWVSEIREPRKTTRIWLGTFPAPEMAAAAYDVAALALK 132

Query: 61  GCKAVLNFPDSIGSYPVPVSMSPADIRVAAATAAAASKRID---------------HGEG 120
           G  AVLNFP S+G YPVP S SP DIR +AATAAAASKR +               HG+ 
Sbjct: 133 GSDAVLNFPTSVGDYPVPASTSPGDIR-SAATAAAASKRAELERRKAAREAMTASFHGDS 192

Query: 121 SYNNH---HPSPPTDEFVDEEALFGMPNLLVDMAEGMLLSPPR-ISSSPSRHEYYSWNSS 169
           S         S    E+VDEEALFGMPNLLV+MAEGMLLSPPR + S P   EYYS  SS
Sbjct: 193 SSTTTAELTTSYDHGEYVDEEALFGMPNLLVEMAEGMLLSPPRMMESPPPSDEYYSPGSS 252

[Close]
BLAST of CmoCh06G007280 vs. NCBI nr
Match: gi|590677807|ref|XP_007040122.1| (Integrase-type DNA-binding superfamily protein [Theobroma cacao])

HSP 1 Score: 201.4 bits (511), Expect = 1.2e-48
Identity = 111/171 (64.91%), Postives = 128/171 (74.85%), Query Frame = 1 

Query: 1   MASTSSNKHHHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAVLALKGC 60
           MAS+SS KH  Y+GIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVA LALKG 
Sbjct: 64  MASSSSGKHPMYRGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGG 123

Query: 61  KAVLNFPDSIGSYPVPVSMSPADIRVAAATAAAASKRIDHGEGSYNNHHPSP----PTDE 120
           +AV+NFP S+ SYP+P S S ADIR AAA AA   K     E +    H +      T E
Sbjct: 124 EAVVNFPGSVASYPLPASTSSADIRKAAAAAALLKKAETTSEINLGTGHQAKNEEMTTQE 183

Query: 121 FVDEEALFGMPNLLVDMAEGMLLSPPRISSSPSRHEYYSWNSSGDGNLWSY 168
           +VDE+AL  +PNLLVDMAEG+L+SPPRISS+PS  +    NS G+ +LWSY
Sbjct: 184 YVDEDALLNLPNLLVDMAEGLLVSPPRISSTPS--DDSPENSDGE-SLWSY 231

The following BLAST results are available for this feature:
BLAST of CmoCh06G007280 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ERF26_ARATH6.4e-4258.43Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana GN=ERF02... [more]
ERF25_ARATH2.1e-4056.11Ethylene-responsive transcription factor ERF025 OS=Arabidopsis thaliana GN=ERF02... [more]
ERF27_ARATH6.0e-4054.35Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana GN=ERF02... [more]
ERF24_ARATH3.1e-3649.15Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana GN=ERF02... [more]
DRE1B_ARATH1.1e-2847.13Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana GN=DRE... [more]
BLAST of CmoCh06G007280 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5V9_CUCSA9.9e-5872.67Uncharacterized protein OS=Cucumis sativus GN=Csa_3G042390 PE=4 SV=1[more]
W6FIY4_9ROSA1.7e-4963.16Dehydration responsive element binding transcription factor OS=Morus notabilis G... [more]
A0A061G5E7_THECC8.4e-4964.91Integrase-type DNA-binding superfamily protein OS=Theobroma cacao GN=TCM_016176 ... [more]
A0A0D2RNQ4_GOSRA1.4e-4862.50Uncharacterized protein OS=Gossypium raimondii GN=B456_003G162600 PE=4 SV=1[more]
A0A0F6SA15_GOSBA1.2e-4761.36APETALA2 OS=Gossypium barbadense PE=2 SV=1[more]
BLAST of CmoCh06G007280 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G52020.11.2e-4156.11 Integrase-type DNA-binding superfamily protein[more]
AT1G12630.13.4e-4154.35 Integrase-type DNA-binding superfamily protein[more]
AT2G36450.11.7e-3749.15 Integrase-type DNA-binding superfamily protein[more]
AT4G25490.16.0e-3047.13 C-repeat/DRE binding factor 1[more]
AT5G51990.11.9e-2842.13 C-repeat-binding factor 4[more]
BLAST of CmoCh06G007280 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659096218|ref|XP_008448976.1|4.1e-7380.47PREDICTED: ethylene-responsive transcription factor ERF026-like [Cucumis melo][more]
gi|700200839|gb|KGN55972.1|1.4e-5772.67hypothetical protein Csa_3G042390 [Cucumis sativus][more]
gi|1009166984|ref|XP_015901879.1|1.3e-5065.19PREDICTED: ethylene-responsive transcription factor ERF027-like [Ziziphus jujuba... [more]
gi|703061698|ref|XP_010086541.1|2.4e-4963.16Ethylene-responsive transcription factor [Morus notabilis][more]
gi|590677807|ref|XP_007040122.1|1.2e-4864.91Integrase-type DNA-binding superfamily protein [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0019760 glucosinolate metabolic process
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0043565 sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G007280.1CmoCh06G007280.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 11..69
score: 4.0
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 11..59
score: 3.
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 11..75
score: 2.0
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 11..67
score: 19
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 11..69
score: 3.99
NoneNo IPR availablePANTHERPTHR31985FAMILY NOT NAMEDcoord: 2..168
score: 3.0
NoneNo IPR availablePANTHERPTHR31985:SF9ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF025-RELATEDcoord: 2..168
score: 3.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh06G007280Cucsa.041590Cucumber (Gy14) v1cgycmoB0030
CmoCh06G007280Cucsa.302760Cucumber (Gy14) v1cgycmoB0834
CmoCh06G007280CmaCh06G007100Cucurbita maxima (Rimu)cmacmoB829
CmoCh06G007280Cla004419Watermelon (97103) v1cmowmB776
CmoCh06G007280Cla011487Watermelon (97103) v1cmowmB795
CmoCh06G007280Csa5G155560Cucumber (Chinese Long) v2cmocuB826
CmoCh06G007280Csa3G042390Cucumber (Chinese Long) v2cmocuB815
CmoCh06G007280MELO3C005630Melon (DHL92) v3.5.1cmomeB736
CmoCh06G007280MELO3C014053Melon (DHL92) v3.5.1cmomeB756
CmoCh06G007280ClCG00G000870Watermelon (Charleston Gray)cmowcgB719
CmoCh06G007280ClCG10G003710Watermelon (Charleston Gray)cmowcgB730
CmoCh06G007280ClCG01G003110Watermelon (Charleston Gray)cmowcgB737
CmoCh06G007280CSPI05G05860Wild cucumber (PI 183967)cmocpiB836
CmoCh06G007280CSPI03G03650Wild cucumber (PI 183967)cmocpiB823
CmoCh06G007280Lsi07G014120Bottle gourd (USVL1VR-Ls)cmolsiB766
CmoCh06G007280MELO3C005630.2Melon (DHL92) v3.6.1cmomedB834
CmoCh06G007280MELO3C014053.2Melon (DHL92) v3.6.1cmomedB861
CmoCh06G007280CsaV3_3G003710Cucumber (Chinese Long) v3cmocucB0961
CmoCh06G007280CsaV3_5G003240Cucumber (Chinese Long) v3cmocucB0974
CmoCh06G007280Cla97C01G003210Watermelon (97103) v2cmowmbB808
CmoCh06G007280Cla97C10G188260Watermelon (97103) v2cmowmbB819
CmoCh06G007280CsGy3G003650Cucumber (Gy14) v2cgybcmoB409
CmoCh06G007280CsGy5G003130Cucumber (Gy14) v2cgybcmoB675
CmoCh06G007280Carg21649Silver-seed gourdcarcmoB1172
CmoCh06G007280Carg25221Silver-seed gourdcarcmoB0026
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh06G007280Melon (DHL92) v3.6.1cmomedB864
CmoCh06G007280Watermelon (97103) v2cmowmbB824
CmoCh06G007280Wax gourdcmowgoB0985
CmoCh06G007280Cucurbita moschata (Rifu)cmocmoB291
CmoCh06G007280Cucurbita maxima (Rimu)cmacmoB341
CmoCh06G007280Cucurbita pepo (Zucchini)cmocpeB768
CmoCh06G007280Cucurbita pepo (Zucchini)cmocpeB797