Lsi07G014120 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi07G014120
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionEthylene-responsive transcription factor 1
Locationchr07 : 20629204 .. 20629713 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTCTACTTCTTCCAAGAGACATGATCACTACAAGGGAATCCGCTGCCGGAGCGGCAAATGGGTGTCCGAGATTCGTGAGCCACGTAAGACTACTCGAATATGGCTCGGTACCTACCCTACGCCCGAGATGGCTGCTGCTGCCTACGACGTAGCTGCACTCGCACTCAAGGGTTGTAATGCTGTTCTCAACTTCCCTGACTTGATTGGTTCCTACCCGGTTCCGGCTTCCTCATCCCCAGCCGATATCCGTTTTGCTGCTGCTGCTGCCGCCGCTTCGAAAAAAGTTGATGATCAAGGAGAAAACAATTACCATAGCTCTCACTACCAGTCTCCACCAACTAATGAATTCGTCGATGAAGAGGCGTTGTTCGGAATGCCGAATCTGCTTGTTGACATGGCGGAAGGAATGCTGTTGTCGCCCCCACGAATGAGCTCGTCGCCGTCTCGACACGACTACTACTCATGGAACTCAAGTGGAGATGGAAATCTTTGGAGCTACCATTAG

mRNA sequence

ATGGCCTCTACTTCTTCCAAGAGACATGATCACTACAAGGGAATCCGCTGCCGGAGCGGCAAATGGGTGTCCGAGATTCGTGAGCCACGTAAGACTACTCGAATATGGCTCGGTACCTACCCTACGCCCGAGATGGCTGCTGCTGCCTACGACGTAGCTGCACTCGCACTCAAGGGTTGTAATGCTGTTCTCAACTTCCCTGACTTGATTGGTTCCTACCCGGTTCCGGCTTCCTCATCCCCAGCCGATATCCGTTTTGCTGCTGCTGCTGCCGCCGCTTCGAAAAAAGTTGATGATCAAGGAGAAAACAATTACCATAGCTCTCACTACCAGTCTCCACCAACTAATGAATTCGTCGATGAAGAGGCGTTGTTCGGAATGCCGAATCTGCTTGTTGACATGGCGGAAGGAATGCTGTTGTCGCCCCCACGAATGAGCTCGTCGCCGTCTCGACACGACTACTACTCATGGAACTCAAGTGGAGATGGAAATCTTTGGAGCTACCATTAG

Coding sequence (CDS)

ATGGCCTCTACTTCTTCCAAGAGACATGATCACTACAAGGGAATCCGCTGCCGGAGCGGCAAATGGGTGTCCGAGATTCGTGAGCCACGTAAGACTACTCGAATATGGCTCGGTACCTACCCTACGCCCGAGATGGCTGCTGCTGCCTACGACGTAGCTGCACTCGCACTCAAGGGTTGTAATGCTGTTCTCAACTTCCCTGACTTGATTGGTTCCTACCCGGTTCCGGCTTCCTCATCCCCAGCCGATATCCGTTTTGCTGCTGCTGCTGCCGCCGCTTCGAAAAAAGTTGATGATCAAGGAGAAAACAATTACCATAGCTCTCACTACCAGTCTCCACCAACTAATGAATTCGTCGATGAAGAGGCGTTGTTCGGAATGCCGAATCTGCTTGTTGACATGGCGGAAGGAATGCTGTTGTCGCCCCCACGAATGAGCTCGTCGCCGTCTCGACACGACTACTACTCATGGAACTCAAGTGGAGATGGAAATCTTTGGAGCTACCATTAG

Protein sequence

MASTSSKRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPDLIGSYPVPASSSPADIRFAAAAAAASKKVDDQGENNYHSSHYQSPPTNEFVDEEALFGMPNLLVDMAEGMLLSPPRMSSSPSRHDYYSWNSSGDGNLWSYH
Homology
[Close]
BLAST of Lsi07G014120 vs. Swiss-Prot
Match: ERF26_ARATH (Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana GN=ERF026 PE=2 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 8.2e-45
Identity = 103/169 (60.95%), Postives = 124/169 (73.37%), Query Frame = 1 

Query: 7   KRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNF 66
           K++  Y+GIRCRSGKWVSEIREP+KTTR+WLGTYPTPEMAAAAYDVAALALKG + +LNF
Sbjct: 85  KKNPVYRGIRCRSGKWVSEIREPKKTTRVWLGTYPTPEMAAAAYDVAALALKGGDTLLNF 144

Query: 67  PDLIGSYPVPASSSPADIRFAAAAAAASK-------KVDDQGENNYHSSHYQSPPTNEFV 126
           PD +GSYP+P SSS A IR AAAAAAA++       KV  + E+  + +   S  T  FV
Sbjct: 145 PDSLGSYPIPLSSSAAHIRCAAAAAAATRGAAGAAVKVGQKKEDKVYDTAESS--TMGFV 204

Query: 127 DEEALFGMPNLLVDMAEGMLLSPPRMSSSPSRHDYYSWNSSGDGNLWSY 169
           DEE L  MP LL DMA+GM+++PP M S PS  D    NS G+ +LWSY
Sbjct: 205 DEEELLNMPGLLADMAKGMMVAPPWMGSPPS--DDSPENSDGE-SLWSY 248

[Close]
BLAST of Lsi07G014120 vs. Swiss-Prot
Match: ERF25_ARATH (Ethylene-responsive transcription factor ERF025 OS=Arabidopsis thaliana GN=ERF025 PE=2 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 2.9e-42
Identity = 100/178 (56.18%), Postives = 117/178 (65.73%), Query Frame = 1 

Query: 2   ASTSSKRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN 61
           A+  S +H  ++GIR R+GKWVSEIREPRKTTRIWLGTYP PEMAAAAYDVAALALKG +
Sbjct: 55  ATGLSGKHSIFRGIRLRNGKWVSEIREPRKTTRIWLGTYPVPEMAAAAYDVAALALKGPD 114

Query: 62  AVLNFPDLIGSYPVPASSSPADIRFAAAAAAASKKVDDQGENNY-------HSSHYQSPP 121
           AVLNFP L  +Y  P S+S ADIR AA+ AA  K+ D  G+               +   
Sbjct: 115 AVLNFPGLALTYVAPVSNSAADIRAAASRAAEMKQPDQGGDEKVLEPVQPGKEEELEEVS 174

Query: 122 TN----EFVDEEALFGMPNLLVDMAEGMLLSPPRMSSSPSRHDYYSWNSSGDGNLWSY 169
            N    EF+DEEA+  MP LL +MAEGML+SPPRM   P+  D    N  GD NLWSY
Sbjct: 175 CNSCSLEFMDEEAMLNMPTLLTEMAEGMLMSPPRMMIHPTMEDDSPENHEGD-NLWSY 231

[Close]
BLAST of Lsi07G014120 vs. Swiss-Prot
Match: ERF27_ARATH (Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana GN=ERF027 PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.5e-41
Identity = 102/188 (54.26%), Postives = 121/188 (64.36%), Query Frame = 1 

Query: 2   ASTSSKRHDH-YKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGC 61
           A   S+R D  Y+GIRCRSGKWVSEIREPRKTTRIWLGTYP  EMAAAAYDVAA+ALKG 
Sbjct: 8   AGLGSRRKDPVYRGIRCRSGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGR 67

Query: 62  NAVLNFPDLIGSYPVPASSSPADIRFAAAAAAASKKVDDQGENNYHSSHYQSPPT----- 121
            AVLNFP  +GSYPVP S+S ADIR AAAAAAA+ K  ++GE    +   +S  +     
Sbjct: 68  EAVLNFPGSVGSYPVPESTSAADIR-AAAAAAAAMKGCEEGEEEKKAKEKKSSSSKSRAR 127

Query: 122 ---------------NEFVDEEALFGMPNLLVDMAEGMLLSPPRMSSSPSRHDYYSWNSS 169
                           EF+DEE +  MPNLL +MAEGM+++PP    S    D  S  +S
Sbjct: 128 ECHVDNDVGSSSWCGTEFMDEEEVLNMPNLLANMAEGMMVAPPSWMGSRPSDD--SPENS 187

[Close]
BLAST of Lsi07G014120 vs. Swiss-Prot
Match: ERF24_ARATH (Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana GN=ERF024 PE=2 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 6.9e-36
Identity = 90/174 (51.72%), Postives = 113/174 (64.94%), Query Frame = 1 

Query: 8   RHDHYKGIRCR--SGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCNAVLN 67
           RH  Y+G+R R  S KWVSEIREPRK  RIWLGT+ TPEMAA AYDVAALALKG  A LN
Sbjct: 11  RHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQAELN 70

Query: 68  FPDLIGSYPVPASSSPADIRFAAAAAA----ASKKVDDQGENNYH-------SSHYQSPP 127
           FP+ + S P P S SPADI+ AAA+AA    A++       NN         +S Y +  
Sbjct: 71  FPNSVSSLPAPTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQTSGVACMNSSYDNTN 130

Query: 128 TNEFVDEEALFGMPNLLVDMAEGMLLSPPRMSSSPSRHDYYSWNSSGDGNLWSY 169
            N F+DE+ +F MPN+L++MAEGMLLSPPR +   + +D   +   GD  LW++
Sbjct: 131 MNGFMDEDLVFDMPNVLMNMAEGMLLSPPRPTVFDAAYDADGF-PGGDDYLWNF 183

[Close]
BLAST of Lsi07G014120 vs. Swiss-Prot
Match: DRE1F_ORYSI (Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. indica GN=DREB1F PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 4.1e-28
Identity = 73/154 (47.40%), Postives = 96/154 (62.34%), Query Frame = 1 

Query: 8   RHDHYKGIRCRSG--KWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKG-CNAVL 67
           RH  Y+G+R R+G  +WV E+REP+   RIWLGTYPTPEMAA A+DVAA+AL+G   A L
Sbjct: 43  RHPVYRGVRARAGGSRWVCEVREPQAQARIWLGTYPTPEMAARAHDVAAIALRGERGAEL 102

Query: 68  NFPDLIGSYPVPASSSPADIRFAAAAAA----------ASKKVDDQGENNYHSSHYQSPP 127
           NFPD   + P   ++SP DIR AAA AA          A  +   +G +   ++     P
Sbjct: 103 NFPDSPSTLPRARTASPEDIRLAAAQAAELYRRPPPPLALPEDPQEGTSGGGATATSGRP 162

Query: 128 TNEFVDEEALFGMPNLLVDMAEGMLLSPPRMSSS 149
              FVDE+A+F MP L+ DMA GM+L+PP +  S
Sbjct: 163 AAVFVDEDAIFDMPGLIDDMARGMMLTPPAIGRS 196

[Close]
BLAST of Lsi07G014120 vs. TrEMBL
Match: A0A0A0L5V9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G042390 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.4e-67
Identity = 132/161 (81.99%), Postives = 142/161 (88.20%), Query Frame = 1 

Query: 14  GIRCRSGKWVSEIR-----EPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPD 73
           G+   S ++VS +R       RKT RIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFP+
Sbjct: 10  GVANGSPRFVSHVRLIEYGSARKTNRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPN 69

Query: 74  LIGSYPVPASSSPADIRFAAAAAAASKKVDDQGENNYHSSHYQSPPTNEFVDEEALFGMP 133
            +  YPVPAS+SP DIR AAAAAAASKKVDDQGEN+YH+SHYQSPPTNEFVDEEALFGMP
Sbjct: 70  SVAFYPVPASTSPNDIRIAAAAAAASKKVDDQGENSYHNSHYQSPPTNEFVDEEALFGMP 129

Query: 134 NLLVDMAEGMLLSPPRMSSSPSRHDYYSWNSSGDGNLWSYH 170
           NLL DMAEGMLLSPPRM+SSPSRHDYYSWNSSGDGNLWSYH
Sbjct: 130 NLLHDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSYH 170

[Close]
BLAST of Lsi07G014120 vs. TrEMBL
Match: A0A061G5E7_THECC (Integrase-type DNA-binding superfamily protein OS=Theobroma cacao GN=TCM_016176 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 9.1e-51
Identity = 114/171 (66.67%), Postives = 133/171 (77.78%), Query Frame = 1 

Query: 1   MASTSSKRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGC 60
           MAS+SS +H  Y+GIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKG 
Sbjct: 64  MASSSSGKHPMYRGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGG 123

Query: 61  NAVLNFPDLIGSYPVPASSSPADIRFAAAAAAASKKVDDQGENNY---HSSHYQSPPTNE 120
            AV+NFP  + SYP+PAS+S ADIR AAAAAA  KK +   E N    H +  +   T E
Sbjct: 124 EAVVNFPGSVASYPLPASTSSADIRKAAAAAALLKKAETTSEINLGTGHQAKNEEMTTQE 183

Query: 121 FVDEEALFGMPNLLVDMAEGMLLSPPRMSSSPSRHDYYSWNSSGDGNLWSY 169
           +VDE+AL  +PNLLVDMAEG+L+SPPR+SS+PS  D    NS G+ +LWSY
Sbjct: 184 YVDEDALLNLPNLLVDMAEGLLVSPPRISSTPS--DDSPENSDGE-SLWSY 231

[Close]
BLAST of Lsi07G014120 vs. TrEMBL
Match: A0A067F854_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030591mg PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.7e-49
Identity = 112/172 (65.12%), Postives = 130/172 (75.58%), Query Frame = 1 

Query: 3   STSSKRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCNA 62
           S+S+K+H  Y+GIRCR+ KWVSEIREPRK+TRIWLGTYPTPEMAAAAYDVAALALKG +A
Sbjct: 6   SSSTKKHPSYRGIRCRNSKWVSEIREPRKSTRIWLGTYPTPEMAAAAYDVAALALKGSDA 65

Query: 63  VLNFPDLIGSYPVPASSSPADIRFAAAAAAAS------KKVDDQGENNYHSSHYQSPPTN 122
           VLNFP+ + +YPVPASSS  DIR AAAAAAAS      + V D  EN        +    
Sbjct: 66  VLNFPNFVSTYPVPASSSSVDIRNAAAAAAASCARRKAESVSDPDENQRMEQSRSNDVIG 125

Query: 123 EFVDEEALFGMPNLLVDMAEGMLLSPPRMSSSPSRHDYYSWNSSGDGNLWSY 169
           EFVDE+AL  MPNLLVDMAEGM++SPPR++SSPS  D    NS G+  LWSY
Sbjct: 126 EFVDEDALLNMPNLLVDMAEGMMVSPPRLNSSPS--DDSPENSDGE-RLWSY 174

[Close]
BLAST of Lsi07G014120 vs. TrEMBL
Match: B9GKP1_POPTR (AP2 domain-containing family protein OS=Populus trichocarpa GN=POPTR_0001s08740g PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.8e-49
Identity = 115/175 (65.71%), Postives = 132/175 (75.43%), Query Frame = 1 

Query: 3   STSSKRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCNA 62
           S++SKRH  Y GIRCR GKWVSEIREPRKTTRIWLGT+P PEMAAAAYDVAALALKG  A
Sbjct: 5   SSNSKRHPMYHGIRCRGGKWVSEIREPRKTTRIWLGTFPKPEMAAAAYDVAALALKGNGA 64

Query: 63  VLNFPDLIGSYPVPASSSPADIRFAAAAAAASKKVD--------DQGENNYHS-SHYQSP 122
           VLNFP  +G+YPVPA++S  DIR AAAAAAA KK +        DQ  N++++   Y + 
Sbjct: 65  VLNFPSSVGTYPVPATASSTDIRNAAAAAAALKKAELSYNEALVDQPRNDHNAIGAYLAS 124

Query: 123 PTNEFVDEEALFGMPNLLVDMAEGMLLSPPRMSSSPSRHDYYSWNSSGDGNLWSY 169
              EFVDEEALF MPNLLVDMA GMLLSPPR++S PS  D    NS G+ +LWSY
Sbjct: 125 SGEEFVDEEALFDMPNLLVDMAGGMLLSPPRITSPPS--DDSQGNSDGE-SLWSY 176

[Close]
BLAST of Lsi07G014120 vs. TrEMBL
Match: V4TQ11_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023840mg PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.8e-49
Identity = 111/172 (64.53%), Postives = 130/172 (75.58%), Query Frame = 1 

Query: 3   STSSKRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCNA 62
           S+S+K+H  Y+GIRCR+ KWVSE+REPRK+TRIWLGTYPTPEMAAAAYDVAALALKG +A
Sbjct: 60  SSSTKKHPLYRGIRCRNSKWVSEVREPRKSTRIWLGTYPTPEMAAAAYDVAALALKGSDA 119

Query: 63  VLNFPDLIGSYPVPASSSPADIRFAAAAAAAS------KKVDDQGENNYHSSHYQSPPTN 122
           VLNFP+ + +YPVPASSS  DIR AAAAAAAS      + V D  EN        +    
Sbjct: 120 VLNFPNFVSTYPVPASSSSVDIRNAAAAAAASCARRKAESVSDPDENQRMEQSRSNDVIG 179

Query: 123 EFVDEEALFGMPNLLVDMAEGMLLSPPRMSSSPSRHDYYSWNSSGDGNLWSY 169
           EFVDE+AL  MPNLLVDMAEGM++SPPR++SSPS  D    NS G+  LWSY
Sbjct: 180 EFVDEDALLNMPNLLVDMAEGMMVSPPRLNSSPS--DDSPENSDGE-RLWSY 228

[Close]
BLAST of Lsi07G014120 vs. TAIR10
Match: AT5G52020.1 (AT5G52020.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 172.9 bits (437), Expect = 1.6e-43
Identity = 100/178 (56.18%), Postives = 117/178 (65.73%), Query Frame = 1 

Query: 2   ASTSSKRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN 61
           A+  S +H  ++GIR R+GKWVSEIREPRKTTRIWLGTYP PEMAAAAYDVAALALKG +
Sbjct: 55  ATGLSGKHSIFRGIRLRNGKWVSEIREPRKTTRIWLGTYPVPEMAAAAYDVAALALKGPD 114

Query: 62  AVLNFPDLIGSYPVPASSSPADIRFAAAAAAASKKVDDQGENNY-------HSSHYQSPP 121
           AVLNFP L  +Y  P S+S ADIR AA+ AA  K+ D  G+               +   
Sbjct: 115 AVLNFPGLALTYVAPVSNSAADIRAAASRAAEMKQPDQGGDEKVLEPVQPGKEEELEEVS 174

Query: 122 TN----EFVDEEALFGMPNLLVDMAEGMLLSPPRMSSSPSRHDYYSWNSSGDGNLWSY 169
            N    EF+DEEA+  MP LL +MAEGML+SPPRM   P+  D    N  GD NLWSY
Sbjct: 175 CNSCSLEFMDEEAMLNMPTLLTEMAEGMLMSPPRMMIHPTMEDDSPENHEGD-NLWSY 231

[Close]
BLAST of Lsi07G014120 vs. TAIR10
Match: AT1G12630.1 (AT1G12630.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 169.9 bits (429), Expect = 1.4e-42
Identity = 102/188 (54.26%), Postives = 121/188 (64.36%), Query Frame = 1 

Query: 2   ASTSSKRHDH-YKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGC 61
           A   S+R D  Y+GIRCRSGKWVSEIREPRKTTRIWLGTYP  EMAAAAYDVAA+ALKG 
Sbjct: 8   AGLGSRRKDPVYRGIRCRSGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGR 67

Query: 62  NAVLNFPDLIGSYPVPASSSPADIRFAAAAAAASKKVDDQGENNYHSSHYQSPPT----- 121
            AVLNFP  +GSYPVP S+S ADIR AAAAAAA+ K  ++GE    +   +S  +     
Sbjct: 68  EAVLNFPGSVGSYPVPESTSAADIR-AAAAAAAAMKGCEEGEEEKKAKEKKSSSSKSRAR 127

Query: 122 ---------------NEFVDEEALFGMPNLLVDMAEGMLLSPPRMSSSPSRHDYYSWNSS 169
                           EF+DEE +  MPNLL +MAEGM+++PP    S    D  S  +S
Sbjct: 128 ECHVDNDVGSSSWCGTEFMDEEEVLNMPNLLANMAEGMMVAPPSWMGSRPSDD--SPENS 187

[Close]
BLAST of Lsi07G014120 vs. TAIR10
Match: AT2G36450.1 (AT2G36450.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 151.8 bits (382), Expect = 3.9e-37
Identity = 90/174 (51.72%), Postives = 113/174 (64.94%), Query Frame = 1 

Query: 8   RHDHYKGIRCR--SGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCNAVLN 67
           RH  Y+G+R R  S KWVSEIREPRK  RIWLGT+ TPEMAA AYDVAALALKG  A LN
Sbjct: 11  RHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQAELN 70

Query: 68  FPDLIGSYPVPASSSPADIRFAAAAAA----ASKKVDDQGENNYH-------SSHYQSPP 127
           FP+ + S P P S SPADI+ AAA+AA    A++       NN         +S Y +  
Sbjct: 71  FPNSVSSLPAPTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQTSGVACMNSSYDNTN 130

Query: 128 TNEFVDEEALFGMPNLLVDMAEGMLLSPPRMSSSPSRHDYYSWNSSGDGNLWSY 169
            N F+DE+ +F MPN+L++MAEGMLLSPPR +   + +D   +   GD  LW++
Sbjct: 131 MNGFMDEDLVFDMPNVLMNMAEGMLLSPPRPTVFDAAYDADGF-PGGDDYLWNF 183

[Close]
BLAST of Lsi07G014120 vs. TAIR10
Match: AT4G25490.1 (AT4G25490.1 C-repeat/DRE binding factor 1)

HSP 1 Score: 125.6 bits (314), Expect = 3.0e-29
Identity = 82/176 (46.59%), Postives = 105/176 (59.66%), Query Frame = 1 

Query: 8   RHDHYKGIRCR-SGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNF 67
           RH  Y+G+R R SGKWVSE+REP K TRIWLGT+ T EMAA A+DVAALAL+G +A LNF
Sbjct: 44  RHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNF 103

Query: 68  PDLIGSYPVPASSSPADIRFAAAAAAASKKVDDQGENNYHSSH-----------YQSPPT 127
            D      +P S+   DI+ AAA AA +    D+  +   ++H             +P  
Sbjct: 104 ADSAWRLRIPESTCAKDIQKAAAEAALA--FQDETCDTTTTNHGLDMEETMVEAIYTPEQ 163

Query: 128 NE---FVDEEALFGMPNLLVDMAEGMLLSPPRMSSSPSRHDYYSWNSSGDGNLWSY 169
           +E   ++DEE +FGMP LL +MAEGMLL PP    S   +  Y     GD +LWSY
Sbjct: 164 SEGAFYMDEETMFGMPTLLDNMAEGMLLPPP----SVQWNHNYDGEGDGDVSLWSY 213

[Close]
BLAST of Lsi07G014120 vs. TAIR10
Match: AT5G51990.1 (AT5G51990.1 C-repeat-binding factor 4)

HSP 1 Score: 118.2 bits (295), Expect = 4.8e-27
Identity = 72/178 (40.45%), Postives = 103/178 (57.87%), Query Frame = 1 

Query: 8   RHDHYKGIRCR-SGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNF 67
           RH  Y+G+R R SGKWV E+REP K +RIWLGT+PT EMAA A+DVAALAL+G +A LNF
Sbjct: 50  RHPIYRGVRQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNF 109

Query: 68  PDLIGSYPVPASSSPADIRFAAAAAA-------------ASKKVDDQGENNYHSSHYQSP 127
            D      +P ++ P +I+ AA+ AA              + + ++           ++ 
Sbjct: 110 ADSAWRLRIPETTCPKEIQKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVREGERRAE 169

Query: 128 PTNE---FVDEEALFGMPNLLVDMAEGMLLSPPRMSSSPSRHDYYSWNSSGDGNLWSY 169
             N    ++D+EAL GMPN   +MAEGMLL PP +       ++  ++  GD +LWS+
Sbjct: 170 EQNGGVFYMDDEALLGMPNFFENMAEGMLLPPPEVG-----WNHNDFDGVGDVSLWSF 222

[Close]
BLAST of Lsi07G014120 vs. NCBI nr
Match: gi|659096218|ref|XP_008448976.1| (PREDICTED: ethylene-responsive transcription factor ERF026-like [Cucumis melo])

HSP 1 Score: 325.1 bits (832), Expect = 7.3e-86
Identity = 156/169 (92.31%), Postives = 162/169 (95.86%), Query Frame = 1 

Query: 1   MASTSSKRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGC 60
           MASTSSKRHDHYKGIRCR GKWVSEIREPRKT RIWLGTYPTPEMAAAAYDVAALALKGC
Sbjct: 1   MASTSSKRHDHYKGIRCRGGKWVSEIREPRKTNRIWLGTYPTPEMAAAAYDVAALALKGC 60

Query: 61  NAVLNFPDLIGSYPVPASSSPADIRFAAAAAAASKKVDDQGENNYHSSHYQSPPTNEFVD 120
           NAVLNFPD + SYPVPAS+SP DIR AAAAAAASK+VDDQGENNYH+SHYQSPP NEFVD
Sbjct: 61  NAVLNFPDSVASYPVPASTSPNDIRIAAAAAAASKRVDDQGENNYHNSHYQSPPANEFVD 120

Query: 121 EEALFGMPNLLVDMAEGMLLSPPRMSSSPSRHDYYSWNSSGDGNLWSYH 170
           EEALFGMPNLL+DMAEGMLLSPPRM+SSPSRHDYYSWNSSGDGNLWSYH
Sbjct: 121 EEALFGMPNLLLDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSYH 169

[Close]
BLAST of Lsi07G014120 vs. NCBI nr
Match: gi|700200839|gb|KGN55972.1| (hypothetical protein Csa_3G042390 [Cucumis sativus])

HSP 1 Score: 263.8 bits (673), Expect = 2.0e-67
Identity = 132/161 (81.99%), Postives = 142/161 (88.20%), Query Frame = 1 

Query: 14  GIRCRSGKWVSEIR-----EPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPD 73
           G+   S ++VS +R       RKT RIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFP+
Sbjct: 10  GVANGSPRFVSHVRLIEYGSARKTNRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPN 69

Query: 74  LIGSYPVPASSSPADIRFAAAAAAASKKVDDQGENNYHSSHYQSPPTNEFVDEEALFGMP 133
            +  YPVPAS+SP DIR AAAAAAASKKVDDQGEN+YH+SHYQSPPTNEFVDEEALFGMP
Sbjct: 70  SVAFYPVPASTSPNDIRIAAAAAAASKKVDDQGENSYHNSHYQSPPTNEFVDEEALFGMP 129

Query: 134 NLLVDMAEGMLLSPPRMSSSPSRHDYYSWNSSGDGNLWSYH 170
           NLL DMAEGMLLSPPRM+SSPSRHDYYSWNSSGDGNLWSYH
Sbjct: 130 NLLHDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSYH 170

[Close]
BLAST of Lsi07G014120 vs. NCBI nr
Match: gi|590677807|ref|XP_007040122.1| (Integrase-type DNA-binding superfamily protein [Theobroma cacao])

HSP 1 Score: 208.0 bits (528), Expect = 1.3e-50
Identity = 114/171 (66.67%), Postives = 133/171 (77.78%), Query Frame = 1 

Query: 1   MASTSSKRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGC 60
           MAS+SS +H  Y+GIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKG 
Sbjct: 64  MASSSSGKHPMYRGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGG 123

Query: 61  NAVLNFPDLIGSYPVPASSSPADIRFAAAAAAASKKVDDQGENNY---HSSHYQSPPTNE 120
            AV+NFP  + SYP+PAS+S ADIR AAAAAA  KK +   E N    H +  +   T E
Sbjct: 124 EAVVNFPGSVASYPLPASTSSADIRKAAAAAALLKKAETTSEINLGTGHQAKNEEMTTQE 183

Query: 121 FVDEEALFGMPNLLVDMAEGMLLSPPRMSSSPSRHDYYSWNSSGDGNLWSY 169
           +VDE+AL  +PNLLVDMAEG+L+SPPR+SS+PS  D    NS G+ +LWSY
Sbjct: 184 YVDEDALLNLPNLLVDMAEGLLVSPPRISSTPS--DDSPENSDGE-SLWSY 231

[Close]
BLAST of Lsi07G014120 vs. NCBI nr
Match: gi|1009166984|ref|XP_015901879.1| (PREDICTED: ethylene-responsive transcription factor ERF027-like [Ziziphus jujuba])

HSP 1 Score: 207.2 bits (526), Expect = 2.2e-50
Identity = 119/180 (66.11%), Postives = 130/180 (72.22%), Query Frame = 1 

Query: 1   MASTSSKRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGC 60
           MAS+SS +H  YKGIRCRSGKWVSEIREPRKTTRIWLGT+PTP+MAA AYDVAALALKG 
Sbjct: 88  MASSSSGKHSRYKGIRCRSGKWVSEIREPRKTTRIWLGTFPTPDMAAVAYDVAALALKGN 147

Query: 61  NAVLNFPDLIGSYPVPASSSPADIRFAAAAAAASKKVD---DQGENNYHSSHYQ------ 120
           +AVLNFP L+G YPVP SSS ADIR AA AAAA+K  D     G N+  SS         
Sbjct: 148 DAVLNFPSLVGKYPVPDSSSAADIRKAATAAAAAKMADWREGMGGNSEPSSKKDDGTLSG 207

Query: 121 ---SPPTNEFVDEEALFGMPNLLVDMAEGMLLSPPRMSSSPSRHDYYSWNSSGDGNLWSY 169
              S    EFVDEE LFGMPNLLVDMAEGML+SPPRMSSS      Y   S G  +LW+Y
Sbjct: 208 DRLSLSGGEFVDEEELFGMPNLLVDMAEGMLVSPPRMSSSDDSPGNY---SDGVESLWNY 264

[Close]
BLAST of Lsi07G014120 vs. NCBI nr
Match: gi|641844677|gb|KDO63569.1| (hypothetical protein CISIN_1g030591mg [Citrus sinensis])

HSP 1 Score: 203.8 bits (517), Expect = 2.5e-49
Identity = 112/172 (65.12%), Postives = 130/172 (75.58%), Query Frame = 1 

Query: 3   STSSKRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCNA 62
           S+S+K+H  Y+GIRCR+ KWVSEIREPRK+TRIWLGTYPTPEMAAAAYDVAALALKG +A
Sbjct: 6   SSSTKKHPSYRGIRCRNSKWVSEIREPRKSTRIWLGTYPTPEMAAAAYDVAALALKGSDA 65

Query: 63  VLNFPDLIGSYPVPASSSPADIRFAAAAAAAS------KKVDDQGENNYHSSHYQSPPTN 122
           VLNFP+ + +YPVPASSS  DIR AAAAAAAS      + V D  EN        +    
Sbjct: 66  VLNFPNFVSTYPVPASSSSVDIRNAAAAAAASCARRKAESVSDPDENQRMEQSRSNDVIG 125

Query: 123 EFVDEEALFGMPNLLVDMAEGMLLSPPRMSSSPSRHDYYSWNSSGDGNLWSY 169
           EFVDE+AL  MPNLLVDMAEGM++SPPR++SSPS  D    NS G+  LWSY
Sbjct: 126 EFVDEDALLNMPNLLVDMAEGMMVSPPRLNSSPS--DDSPENSDGE-RLWSY 174

The following BLAST results are available for this feature:
BLAST of Lsi07G014120 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ERF26_ARATH8.2e-4560.95Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana GN=ERF02... [more]
ERF25_ARATH2.9e-4256.18Ethylene-responsive transcription factor ERF025 OS=Arabidopsis thaliana GN=ERF02... [more]
ERF27_ARATH2.5e-4154.26Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana GN=ERF02... [more]
ERF24_ARATH6.9e-3651.72Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana GN=ERF02... [more]
DRE1F_ORYSI4.1e-2847.40Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. indica ... [more]
BLAST of Lsi07G014120 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5V9_CUCSA1.4e-6781.99Uncharacterized protein OS=Cucumis sativus GN=Csa_3G042390 PE=4 SV=1[more]
A0A061G5E7_THECC9.1e-5166.67Integrase-type DNA-binding superfamily protein OS=Theobroma cacao GN=TCM_016176 ... [more]
A0A067F854_CITSI1.7e-4965.12Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030591mg PE=4 SV=1[more]
B9GKP1_POPTR3.8e-4965.71AP2 domain-containing family protein OS=Populus trichocarpa GN=POPTR_0001s08740g... [more]
V4TQ11_9ROSI3.8e-4964.53Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023840mg PE=4 SV=1[more]
BLAST of Lsi07G014120 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G52020.11.6e-4356.18 Integrase-type DNA-binding superfamily protein[more]
AT1G12630.11.4e-4254.26 Integrase-type DNA-binding superfamily protein[more]
AT2G36450.13.9e-3751.72 Integrase-type DNA-binding superfamily protein[more]
AT4G25490.13.0e-2946.59 C-repeat/DRE binding factor 1[more]
AT5G51990.14.8e-2740.45 C-repeat-binding factor 4[more]
BLAST of Lsi07G014120 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659096218|ref|XP_008448976.1|7.3e-8692.31PREDICTED: ethylene-responsive transcription factor ERF026-like [Cucumis melo][more]
gi|700200839|gb|KGN55972.1|2.0e-6781.99hypothetical protein Csa_3G042390 [Cucumis sativus][more]
gi|590677807|ref|XP_007040122.1|1.3e-5066.67Integrase-type DNA-binding superfamily protein [Theobroma cacao][more]
gi|1009166984|ref|XP_015901879.1|2.2e-5066.11PREDICTED: ethylene-responsive transcription factor ERF027-like [Ziziphus jujuba... [more]
gi|641844677|gb|KDO63569.1|2.5e-4965.12hypothetical protein CISIN_1g030591mg [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR001471AP2/ERF_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0019760 glucosinolate metabolic process
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0043565 sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi07G014120.1Lsi07G014120.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 11..68
score: 2.4
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 11..59
score: 3.4
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 11..75
score: 4.0
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 11..67
score: 19
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 11..68
score: 1.96
NoneNo IPR availablePANTHERPTHR31985FAMILY NOT NAMEDcoord: 2..169
score: 1.4
NoneNo IPR availablePANTHERPTHR31985:SF9ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF025-RELATEDcoord: 2..169
score: 1.4