ClCG10G003710 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG10G003710
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Ethylene-responsive transcription factor 1
Location	CG_Chr10 : 4644933 .. 4645439 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCCACCACCTCCTCCAACAGACATGATCACTACAAAGGAATCCGCTGCCGCAGCGGCAAATGGGTGTCCGAGATTCGTGAGCCACGTAAGACTACCCGAATATGGCTCGGTACCTACCCTACGCCGGAGATGGCTGCTGCTGCCTACGATGTCGCCGCACTCGCACTCAAGGGTTGCAATGCTGTTCTCAACTTCCCGGAATTGATTGCCTCCTACCCGGTTCCGGCTTCCTCGTCCCCAGCCGATATCCGATTTTCTGCCGCTGCTGCTGCCGCCTTGAAAAAAGTTGATGATCAAGGACAAAACACTGACCAAAGCTTTCACCACCAGTCTCTGCCAACCAATGAGTTTGTCGACGAAGAGGCGCTGTTCGGAATGCCGAATCTGCTTGTTGACATGGCCGAGGGAATGCTGTTGTCCCCACCACGAATGACCTCGTCGCCGTCCCGACATGACTCATGGAACTCAAGTGGAGATGGAAATCTTTGGAGCTACCACTAG

mRNA sequence

ATGGCCTCCACCACCTCCTCCAACAGACATGATCACTACAAAGGAATCCGCTGCCGCAGCGGCAAATGGGTGTCCGAGATTCGTGAGCCACGTAAGACTACCCGAATATGGCTCGGTACCTACCCTACGCCGGAGATGGCTGCTGCTGCCTACGATGTCGCCGCACTCGCACTCAAGGGTTGCAATGCTGTTCTCAACTTCCCGGAATTGATTGCCTCCTACCCGGTTCCGGCTTCCTCGTCCCCAGCCGATATCCGATTTTCTGCCGCTGCTGCTGCCGCCTTGAAAAAAGTTGATGATCAAGGACAAAACACTGACCAAAGCTTTCACCACCAGTCTCTGCCAACCAATGAGTTTGTCGACGAAGAGGCGCTGTTCGGAATGCCGAATCTGCTTGTTGACATGGCCGAGGGAATGCTGTTGTCCCCACCACGAATGACCTCGTCGCCGTCCCGACATGACTCATGGAACTCAAGTGGAGATGGAAATCTTTGGAGCTACCACTAG

Coding sequence (CDS)

ATGGCCTCCACCACCTCCTCCAACAGACATGATCACTACAAAGGAATCCGCTGCCGCAGCGGCAAATGGGTGTCCGAGATTCGTGAGCCACGTAAGACTACCCGAATATGGCTCGGTACCTACCCTACGCCGGAGATGGCTGCTGCTGCCTACGATGTCGCCGCACTCGCACTCAAGGGTTGCAATGCTGTTCTCAACTTCCCGGAATTGATTGCCTCCTACCCGGTTCCGGCTTCCTCGTCCCCAGCCGATATCCGATTTTCTGCCGCTGCTGCTGCCGCCTTGAAAAAAGTTGATGATCAAGGACAAAACACTGACCAAAGCTTTCACCACCAGTCTCTGCCAACCAATGAGTTTGTCGACGAAGAGGCGCTGTTCGGAATGCCGAATCTGCTTGTTGACATGGCCGAGGGAATGCTGTTGTCCCCACCACGAATGACCTCGTCGCCGTCCCGACATGACTCATGGAACTCAAGTGGAGATGGAAATCTTTGGAGCTACCACTAG

Protein sequence

MASTTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQNTDQSFHHQSLPTNEFVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDSWNSSGDGNLWSYH

Homology

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BLAST of ClCG10G003710 vs. Swiss-Prot
Match: ERF26_ARATH (Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana GN=ERF026 PE=2 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.1e-45
Identity = 100/175 (57.14%), Postives = 119/175 (68.00%), Query Frame = 1


Query: 1   MASTTSSNRHDH---YKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALA 60
           MA+ T  +R      Y+GIRCRSGKWVSEIREP+KTTR+WLGTYPTPEMAAAAYDVAALA
Sbjct: 75  MATDTDISRRKKNPVYRGIRCRSGKWVSEIREPKKTTRVWLGTYPTPEMAAAAYDVAALA 134

Query: 61  LKGCNAVLNFPELIASYPVPASSSPADIRFSAAAAAALK-----KVDDQGQNTDQSFHHQ 120
           LKG + +LNFP+ + SYP+P SSS A IR +AAAAAA +      V    +  D+ +   
Sbjct: 135 LKGGDTLLNFPDSLGSYPIPLSSSAAHIRCAAAAAAATRGAAGAAVKVGQKKEDKVYDTA 194

Query: 121 SLPTNEFVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDSWNSSGDGNLWSY 168
              T  FVDEE L  MP LL DMA+GM+++PP M S PS     NS G+ +LWSY
Sbjct: 195 ESSTMGFVDEEELLNMPGLLADMAKGMMVAPPWMGSPPSDDSPENSDGE-SLWSY 248

[Close]

BLAST of ClCG10G003710 vs. Swiss-Prot
Match: ERF25_ARATH (Ethylene-responsive transcription factor ERF025 OS=Arabidopsis thaliana GN=ERF025 PE=2 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 5.3e-44
Identity = 97/177 (54.80%), Postives = 117/177 (66.10%), Query Frame = 1


Query: 3   STTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN 62
           +T  S +H  ++GIR R+GKWVSEIREPRKTTRIWLGTYP PEMAAAAYDVAALALKG +
Sbjct: 55  ATGLSGKHSIFRGIRLRNGKWVSEIREPRKTTRIWLGTYPVPEMAAAAYDVAALALKGPD 114

Query: 63  AVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQ---------NTDQSFHHQS 122
           AVLNFP L  +Y  P S+S ADIR +A+ AA +K+ D  G            ++     S
Sbjct: 115 AVLNFPGLALTYVAPVSNSAADIRAAASRAAEMKQPDQGGDEKVLEPVQPGKEEELEEVS 174

Query: 123 LP--TNEFVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDSWNSSGDG-NLWSY 168
               + EF+DEEA+  MP LL +MAEGML+SPPRM   P+  D    + +G NLWSY
Sbjct: 175 CNSCSLEFMDEEAMLNMPTLLTEMAEGMLMSPPRMMIHPTMEDDSPENHEGDNLWSY 231

[Close]

BLAST of ClCG10G003710 vs. Swiss-Prot
Match: ERF27_ARATH (Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana GN=ERF027 PE=2 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 6.9e-44
Identity = 97/185 (52.43%), Postives = 114/185 (61.62%), Query Frame = 1


Query: 2   ASTTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGC 61
           A   S  +   Y+GIRCRSGKWVSEIREPRKTTRIWLGTYP  EMAAAAYDVAA+ALKG 
Sbjct: 8   AGLGSRRKDPVYRGIRCRSGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGR 67

Query: 62  NAVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQ------------------ 121
            AVLNFP  + SYPVP S+S ADIR +AAAAAA+K  ++  +                  
Sbjct: 68  EAVLNFPGSVGSYPVPESTSAADIRAAAAAAAAMKGCEEGEEEKKAKEKKSSSSKSRARE 127

Query: 122 -NTDQSFHHQSLPTNEFVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDSWNSSGDG 168
            + D      S    EF+DEE +  MPNLL +MAEGM+++PP    S    DS  +S D 
Sbjct: 128 CHVDNDVGSSSWCGTEFMDEEEVLNMPNLLANMAEGMMVAPPSWMGSRPSDDSPENSNDE 187

[Close]

BLAST of ClCG10G003710 vs. Swiss-Prot
Match: ERF24_ARATH (Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana GN=ERF024 PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.6e-37
Identity = 89/179 (49.72%), Postives = 113/179 (63.13%), Query Frame = 1


Query: 3   STTSSNRHDHYKGIRCR--SGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKG 62
           S  +  RH  Y+G+R R  S KWVSEIREPRK  RIWLGT+ TPEMAA AYDVAALALKG
Sbjct: 5   SKDNGGRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKG 64

Query: 63  CNAVLNFPELIASYPVPASSSPADIRFSAAAAA--------ALKKVDDQGQNTDQSFHHQ 122
             A LNFP  ++S P P S SPADI+ +AA+AA        A+   ++  Q +  +  + 
Sbjct: 65  SQAELNFPNSVSSLPAPTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQTSGVACMNS 124

Query: 123 SLPT---NEFVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDSWN-SSGDGNLWSY 168
           S      N F+DE+ +F MPN+L++MAEGMLLSPPR T   + +D+     GD  LW++
Sbjct: 125 SYDNTNMNGFMDEDLVFDMPNVLMNMAEGMLLSPPRPTVFDAAYDADGFPGGDDYLWNF 183

[Close]

BLAST of ClCG10G003710 vs. Swiss-Prot
Match: DRE1F_ORYSJ (Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. japonica GN=DREB1F PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.8e-29
Identity = 75/166 (45.18%), Postives = 99/166 (59.64%), Query Frame = 1


Query: 9   RHDHYKGIRCRSG--KWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKG-CNAVL 68
           RH  Y+G+R R+G  +WV E+REP+   RIWLGTYPTPEMAA A+DVAA+AL+G   A L
Sbjct: 43  RHPVYRGVRARAGGSRWVCEVREPQAQARIWLGTYPTPEMAARAHDVAAIALRGERGAEL 102

Query: 69  NFPELIASYPVPASSSPADIRFSAAAAA----------ALKKVDDQGQNTDQSFHHQSLP 128
           NFP+  ++ P   ++SP DIR +AA AA          AL +   +G +   +      P
Sbjct: 103 NFPDSPSTLPRARTASPEDIRLAAAQAAELYRRPPPPLALPEDPQEGTSGGGATATSGRP 162

Query: 129 TNEFVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDSWNSSGD 162
              FVDE+A+F MP L+ DMA GM+L+PP +  S    D W +  D
Sbjct: 163 AAVFVDEDAIFDMPGLIDDMARGMMLTPPAIGRS---LDDWAAIDD 205

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BLAST of ClCG10G003710 vs. TrEMBL
Match: A0A0A0L5V9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G042390 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 5.6e-61
Identity = 123/161 (76.40%), Postives = 134/161 (83.23%), Query Frame = 1


Query: 15  GIRCRSGKWVSEIR-----EPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPE 74
           G+   S ++VS +R       RKT RIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFP 
Sbjct: 10  GVANGSPRFVSHVRLIEYGSARKTNRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPN 69

Query: 75  LIASYPVPASSSPADIRFSAAAAAALKKVDDQGQNTDQSFHHQSLPTNEFVDEEALFGMP 134
            +A YPVPAS+SP DIR +AAAAAA KKVDDQG+N+  + H+QS PTNEFVDEEALFGMP
Sbjct: 70  SVAFYPVPASTSPNDIRIAAAAAAASKKVDDQGENSYHNSHYQSPPTNEFVDEEALFGMP 129

Query: 135 NLLVDMAEGMLLSPPRMTSSPSRHD--SWNSSGDGNLWSYH 169
           NLL DMAEGMLLSPPRM SSPSRHD  SWNSSGDGNLWSYH
Sbjct: 130 NLLHDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSYH 170

[Close]

BLAST of ClCG10G003710 vs. TrEMBL
Match: A0A061G5E7_THECC (Integrase-type DNA-binding superfamily protein OS=Theobroma cacao GN=TCM_016176 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 9.6e-53
Identity = 108/168 (64.29%), Postives = 133/168 (79.17%), Query Frame = 1


Query: 3   STTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN 62
           +++SS +H  Y+GIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKG  
Sbjct: 65  ASSSSGKHPMYRGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGGE 124

Query: 63  AVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQ---NTDQSFHHQSLPTNEF 122
           AV+NFP  +ASYP+PAS+S ADIR +AAAAA LKK +   +    T     ++ + T E+
Sbjct: 125 AVVNFPGSVASYPLPASTSSADIRKAAAAAALLKKAETTSEINLGTGHQAKNEEMTTQEY 184

Query: 123 VDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDSWNSSGDGNLWSY 168
           VDE+AL  +PNLLVDMAEG+L+SPPR++S+PS     NS G+ +LWSY
Sbjct: 185 VDEDALLNLPNLLVDMAEGLLVSPPRISSTPSDDSPENSDGE-SLWSY 231

[Close]

BLAST of ClCG10G003710 vs. TrEMBL
Match: A0A059CI54_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01924 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.4e-51
Identity = 111/182 (60.99%), Postives = 132/182 (72.53%), Query Frame = 1


Query: 3   STTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN 62
           S +S  +H  Y+GIR RSGKWVSEIREPRKTTR+WLGTYPTPEMAAAAYDVAALALKG +
Sbjct: 83  SASSGGKHPFYRGIRSRSGKWVSEIREPRKTTRVWLGTYPTPEMAAAAYDVAALALKGGD 142

Query: 63  AVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQNTDQSF------------- 122
           AVLNFP L+ SYPVPAS++P D+R +AAAAAA +K +  G   D +              
Sbjct: 143 AVLNFPHLVKSYPVPASTAPTDVRRAAAAAAASRKAETSGGTDDTALLGQEGDEGKTRKD 202

Query: 123 HHQSL----PTNEFVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDSWNSSGDGNLW 168
           H   L    P  EF+DEEALF MPNLLVDMAEGM++SPPR++S PS  DS ++S   +LW
Sbjct: 203 HRPDLSSKPPEAEFIDEEALFDMPNLLVDMAEGMMVSPPRISSPPS-DDSPDNSDMESLW 262

[Close]

BLAST of ClCG10G003710 vs. TrEMBL
Match: T1QCH2_CARPA (Ethylene-responsive transcription factor 1 OS=Carica papaya GN=ERF1 PE=2 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 4.0e-51
Identity = 109/167 (65.27%), Postives = 127/167 (76.05%), Query Frame = 1


Query: 1   MASTTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKG 60
           MAS++S+ +H  Y+GIR RS KWVSEIREPRKTTRIWLGTYP+PEMAAAAYDVAALALKG
Sbjct: 48  MASSSSTRKHPMYRGIRRRSDKWVSEIREPRKTTRIWLGTYPSPEMAAAAYDVAALALKG 107

Query: 61  CNAVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQNTDQSFHHQSLPTNEFV 120
            +AVLNFP L+ +YPVP S+SPADIR +A AAAALKK    G +     HHQ     EF+
Sbjct: 108 GDAVLNFPALVGTYPVPKSTSPADIRDAATAAAALKKPPTAGDDPAPD-HHQY--KGEFI 167

Query: 121 DEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDSWNSSGDGNLWSY 168
           DEE L  MPNLLVDMAEGM++SPPR++S PS     N     +LWSY
Sbjct: 168 DEEELLNMPNLLVDMAEGMMVSPPRISSPPSDDSQENFDHGESLWSY 211

[Close]

BLAST of ClCG10G003710 vs. TrEMBL
Match: B9GKP1_POPTR (AP2 domain-containing family protein OS=Populus trichocarpa GN=POPTR_0001s08740g PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 5.3e-51
Identity = 115/176 (65.34%), Postives = 130/176 (73.86%), Query Frame = 1


Query: 3   STTSSN--RHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKG 62
           +TTSSN  RH  Y GIRCR GKWVSEIREPRKTTRIWLGT+P PEMAAAAYDVAALALKG
Sbjct: 2   ATTSSNSKRHPMYHGIRCRGGKWVSEIREPRKTTRIWLGTFPKPEMAAAAYDVAALALKG 61

Query: 63  CNAVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVD--------DQGQNTDQSF-HH 122
             AVLNFP  + +YPVPA++S  DIR +AAAAAALKK +        DQ +N   +   +
Sbjct: 62  NGAVLNFPSSVGTYPVPATASSTDIRNAAAAAAALKKAELSYNEALVDQPRNDHNAIGAY 121

Query: 123 QSLPTNEFVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDSWNSSGDGNLWSY 168
            +    EFVDEEALF MPNLLVDMA GMLLSPPR+TS PS     NS G+ +LWSY
Sbjct: 122 LASSGEEFVDEEALFDMPNLLVDMAGGMLLSPPRITSPPSDDSQGNSDGE-SLWSY 176

[Close]

BLAST of ClCG10G003710 vs. TAIR10
Match: AT5G52020.1 (AT5G52020.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 178.7 bits (452), Expect = 3.0e-45
Identity = 97/177 (54.80%), Postives = 117/177 (66.10%), Query Frame = 1


Query: 3   STTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN 62
           +T  S +H  ++GIR R+GKWVSEIREPRKTTRIWLGTYP PEMAAAAYDVAALALKG +
Sbjct: 55  ATGLSGKHSIFRGIRLRNGKWVSEIREPRKTTRIWLGTYPVPEMAAAAYDVAALALKGPD 114

Query: 63  AVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQ---------NTDQSFHHQS 122
           AVLNFP L  +Y  P S+S ADIR +A+ AA +K+ D  G            ++     S
Sbjct: 115 AVLNFPGLALTYVAPVSNSAADIRAAASRAAEMKQPDQGGDEKVLEPVQPGKEEELEEVS 174

Query: 123 LP--TNEFVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDSWNSSGDG-NLWSY 168
               + EF+DEEA+  MP LL +MAEGML+SPPRM   P+  D    + +G NLWSY
Sbjct: 175 CNSCSLEFMDEEAMLNMPTLLTEMAEGMLMSPPRMMIHPTMEDDSPENHEGDNLWSY 231

[Close]

BLAST of ClCG10G003710 vs. TAIR10
Match: AT1G12630.1 (AT1G12630.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 178.3 bits (451), Expect = 3.9e-45
Identity = 97/185 (52.43%), Postives = 114/185 (61.62%), Query Frame = 1


Query: 2   ASTTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGC 61
           A   S  +   Y+GIRCRSGKWVSEIREPRKTTRIWLGTYP  EMAAAAYDVAA+ALKG 
Sbjct: 8   AGLGSRRKDPVYRGIRCRSGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGR 67

Query: 62  NAVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQ------------------ 121
            AVLNFP  + SYPVP S+S ADIR +AAAAAA+K  ++  +                  
Sbjct: 68  EAVLNFPGSVGSYPVPESTSAADIRAAAAAAAAMKGCEEGEEEKKAKEKKSSSSKSRARE 127

Query: 122 -NTDQSFHHQSLPTNEFVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDSWNSSGDG 168
            + D      S    EF+DEE +  MPNLL +MAEGM+++PP    S    DS  +S D 
Sbjct: 128 CHVDNDVGSSSWCGTEFMDEEEVLNMPNLLANMAEGMMVAPPSWMGSRPSDDSPENSNDE 187

[Close]

BLAST of ClCG10G003710 vs. TAIR10
Match: AT2G36450.1 (AT2G36450.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 157.1 bits (396), Expect = 9.2e-39
Identity = 89/179 (49.72%), Postives = 113/179 (63.13%), Query Frame = 1


Query: 3   STTSSNRHDHYKGIRCR--SGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKG 62
           S  +  RH  Y+G+R R  S KWVSEIREPRK  RIWLGT+ TPEMAA AYDVAALALKG
Sbjct: 5   SKDNGGRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKG 64

Query: 63  CNAVLNFPELIASYPVPASSSPADIRFSAAAAA--------ALKKVDDQGQNTDQSFHHQ 122
             A LNFP  ++S P P S SPADI+ +AA+AA        A+   ++  Q +  +  + 
Sbjct: 65  SQAELNFPNSVSSLPAPTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQTSGVACMNS 124

Query: 123 SLPT---NEFVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDSWN-SSGDGNLWSY 168
           S      N F+DE+ +F MPN+L++MAEGMLLSPPR T   + +D+     GD  LW++
Sbjct: 125 SYDNTNMNGFMDEDLVFDMPNVLMNMAEGMLLSPPRPTVFDAAYDADGFPGGDDYLWNF 183

[Close]

BLAST of ClCG10G003710 vs. TAIR10
Match: AT4G25490.1 (AT4G25490.1 C-repeat/DRE binding factor 1)

HSP 1 Score: 129.0 bits (323), Expect = 2.7e-30
Identity = 82/175 (46.86%), Postives = 105/175 (60.00%), Query Frame = 1


Query: 9   RHDHYKGIRCR-SGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNF 68
           RH  Y+G+R R SGKWVSE+REP K TRIWLGT+ T EMAA A+DVAALAL+G +A LNF
Sbjct: 44  RHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNF 103

Query: 69  PELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQNTD-------QSFHHQSLPTNE-- 128
            +      +P S+   DI+  AAA AAL   D+    T        +    +++ T E  
Sbjct: 104 ADSAWRLRIPESTCAKDIQ-KAAAEAALAFQDETCDTTTTNHGLDMEETMVEAIYTPEQS 163

Query: 129 ----FVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDSWNSSGDG--NLWSY 168
               ++DEE +FGMP LL +MAEGMLL PP    S   + +++  GDG  +LWSY
Sbjct: 164 EGAFYMDEETMFGMPTLLDNMAEGMLLPPP----SVQWNHNYDGEGDGDVSLWSY 213

[Close]

BLAST of ClCG10G003710 vs. TAIR10
Match: AT5G51990.1 (AT5G51990.1 C-repeat-binding factor 4)

HSP 1 Score: 124.4 bits (311), Expect = 6.6e-29
Identity = 74/176 (42.05%), Postives = 102/176 (57.95%), Query Frame = 1


Query: 9   RHDHYKGIRCR-SGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNF 68
           RH  Y+G+R R SGKWV E+REP K +RIWLGT+PT EMAA A+DVAALAL+G +A LNF
Sbjct: 50  RHPIYRGVRQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNF 109

Query: 69  PELIASYPVPASSSPADIRFSA--AAAAALKKVDDQGQNTDQSFHH---QSLPTNE---- 128
            +      +P ++ P +I+ +A  AA A   +   +G  T         + +   E    
Sbjct: 110 ADSAWRLRIPETTCPKEIQKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVREGERRAE 169

Query: 129 -------FVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDSWNSSGDGNLWSY 168
                  ++D+EAL GMPN   +MAEGMLL PP +  +   H+ ++  GD +LWS+
Sbjct: 170 EQNGGVFYMDDEALLGMPNFFENMAEGMLLPPPEVGWN---HNDFDGVGDVSLWSF 222

[Close]

BLAST of ClCG10G003710 vs. NCBI nr
Match: gi|659096218|ref|XP_008448976.1| (PREDICTED: ethylene-responsive transcription factor ERF026-like [Cucumis melo])

HSP 1 Score: 293.9 bits (751), Expect = 1.8e-76
Identity = 141/168 (83.93%), Postives = 152/168 (90.48%), Query Frame = 1


Query: 3   STTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN 62
           ++TSS RHDHYKGIRCR GKWVSEIREPRKT RIWLGTYPTPEMAAAAYDVAALALKGCN
Sbjct: 2   ASTSSKRHDHYKGIRCRGGKWVSEIREPRKTNRIWLGTYPTPEMAAAAYDVAALALKGCN 61

Query: 63  AVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQNTDQSFHHQSLPTNEFVDE 122
           AVLNFP+ +ASYPVPAS+SP DIR +AAAAAA K+VDDQG+N   + H+QS P NEFVDE
Sbjct: 62  AVLNFPDSVASYPVPASTSPNDIRIAAAAAAASKRVDDQGENNYHNSHYQSPPANEFVDE 121

Query: 123 EALFGMPNLLVDMAEGMLLSPPRMTSSPSRHD--SWNSSGDGNLWSYH 169
           EALFGMPNLL+DMAEGMLLSPPRM SSPSRHD  SWNSSGDGNLWSYH
Sbjct: 122 EALFGMPNLLLDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSYH 169

[Close]

BLAST of ClCG10G003710 vs. NCBI nr
Match: gi|700200839|gb|KGN55972.1| (hypothetical protein Csa_3G042390 [Cucumis sativus])

HSP 1 Score: 241.9 bits (616), Expect = 8.1e-61
Identity = 123/161 (76.40%), Postives = 134/161 (83.23%), Query Frame = 1


Query: 15  GIRCRSGKWVSEIR-----EPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPE 74
           G+   S ++VS +R       RKT RIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFP 
Sbjct: 10  GVANGSPRFVSHVRLIEYGSARKTNRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPN 69

Query: 75  LIASYPVPASSSPADIRFSAAAAAALKKVDDQGQNTDQSFHHQSLPTNEFVDEEALFGMP 134
            +A YPVPAS+SP DIR +AAAAAA KKVDDQG+N+  + H+QS PTNEFVDEEALFGMP
Sbjct: 70  SVAFYPVPASTSPNDIRIAAAAAAASKKVDDQGENSYHNSHYQSPPTNEFVDEEALFGMP 129

Query: 135 NLLVDMAEGMLLSPPRMTSSPSRHD--SWNSSGDGNLWSYH 169
           NLL DMAEGMLLSPPRM SSPSRHD  SWNSSGDGNLWSYH
Sbjct: 130 NLLHDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSYH 170

[Close]

BLAST of ClCG10G003710 vs. NCBI nr
Match: gi|590677807|ref|XP_007040122.1| (Integrase-type DNA-binding superfamily protein [Theobroma cacao])

HSP 1 Score: 214.5 bits (545), Expect = 1.4e-52
Identity = 108/168 (64.29%), Postives = 133/168 (79.17%), Query Frame = 1


Query: 3   STTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN 62
           +++SS +H  Y+GIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKG  
Sbjct: 65  ASSSSGKHPMYRGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGGE 124

Query: 63  AVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQ---NTDQSFHHQSLPTNEF 122
           AV+NFP  +ASYP+PAS+S ADIR +AAAAA LKK +   +    T     ++ + T E+
Sbjct: 125 AVVNFPGSVASYPLPASTSSADIRKAAAAAALLKKAETTSEINLGTGHQAKNEEMTTQEY 184

Query: 123 VDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDSWNSSGDGNLWSY 168
           VDE+AL  +PNLLVDMAEG+L+SPPR++S+PS     NS G+ +LWSY
Sbjct: 185 VDEDALLNLPNLLVDMAEGLLVSPPRISSTPSDDSPENSDGE-SLWSY 231

[Close]

BLAST of ClCG10G003710 vs. NCBI nr
Match: gi|702332514|ref|XP_010054789.1| (PREDICTED: ethylene-responsive transcription factor ERF025-like [Eucalyptus grandis])

HSP 1 Score: 209.9 bits (533), Expect = 3.4e-51
Identity = 111/182 (60.99%), Postives = 132/182 (72.53%), Query Frame = 1


Query: 3   STTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN 62
           S +S  +H  Y+GIR RSGKWVSEIREPRKTTR+WLGTYPTPEMAAAAYDVAALALKG +
Sbjct: 83  SASSGGKHPFYRGIRSRSGKWVSEIREPRKTTRVWLGTYPTPEMAAAAYDVAALALKGGD 142

Query: 63  AVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQNTDQSF------------- 122
           AVLNFP L+ SYPVPAS++P D+R +AAAAAA +K +  G   D +              
Sbjct: 143 AVLNFPHLVKSYPVPASTAPTDVRRAAAAAAASRKAETSGGTDDTALLGQEGDEGKTRKD 202

Query: 123 HHQSL----PTNEFVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDSWNSSGDGNLW 168
           H   L    P  EF+DEEALF MPNLLVDMAEGM++SPPR++S PS  DS ++S   +LW
Sbjct: 203 HRPDLSSKPPEAEFIDEEALFDMPNLLVDMAEGMMVSPPRISSPPS-DDSPDNSDMESLW 262

[Close]

BLAST of ClCG10G003710 vs. NCBI nr
Match: gi|410108797|gb|AFV60733.1| (ethylene-responsive transcription factor 1 [Carica papaya])

HSP 1 Score: 209.1 bits (531), Expect = 5.8e-51
Identity = 109/167 (65.27%), Postives = 127/167 (76.05%), Query Frame = 1


Query: 1   MASTTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKG 60
           MAS++S+ +H  Y+GIR RS KWVSEIREPRKTTRIWLGTYP+PEMAAAAYDVAALALKG
Sbjct: 48  MASSSSTRKHPMYRGIRRRSDKWVSEIREPRKTTRIWLGTYPSPEMAAAAYDVAALALKG 107

Query: 61  CNAVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQNTDQSFHHQSLPTNEFV 120
            +AVLNFP L+ +YPVP S+SPADIR +A AAAALKK    G +     HHQ     EF+
Sbjct: 108 GDAVLNFPALVGTYPVPKSTSPADIRDAATAAAALKKPPTAGDDPAPD-HHQY--KGEFI 167

Query: 121 DEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDSWNSSGDGNLWSY 168
           DEE L  MPNLLVDMAEGM++SPPR++S PS     N     +LWSY
Sbjct: 168 DEEELLNMPNLLVDMAEGMMVSPPRISSPPSDDSQENFDHGESLWSY 211

The following BLAST results are available for this feature:

BLAST of ClCG10G003710 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ERF26_ARATH	2.1e-45	57.14	Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana GN=ERF02...	[more]
ERF25_ARATH	5.3e-44	54.80	Ethylene-responsive transcription factor ERF025 OS=Arabidopsis thaliana GN=ERF02...	[more]
ERF27_ARATH	6.9e-44	52.43	Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana GN=ERF02...	[more]
ERF24_ARATH	1.6e-37	49.72	Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana GN=ERF02...	[more]
DRE1F_ORYSJ	2.8e-29	45.18	Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. japonic...	[more]

BLAST of ClCG10G003710 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5V9_CUCSA	5.6e-61	76.40	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G042390 PE=4 SV=1	[more]
A0A061G5E7_THECC	9.6e-53	64.29	Integrase-type DNA-binding superfamily protein OS=Theobroma cacao GN=TCM_016176 ...	[more]
A0A059CI54_EUCGR	2.4e-51	60.99	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01924 PE=4 SV=1	[more]
T1QCH2_CARPA	4.0e-51	65.27	Ethylene-responsive transcription factor 1 OS=Carica papaya GN=ERF1 PE=2 SV=1	[more]
B9GKP1_POPTR	5.3e-51	65.34	AP2 domain-containing family protein OS=Populus trichocarpa GN=POPTR_0001s08740g...	[more]

BLAST of ClCG10G003710 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G52020.1	3.0e-45	54.80	Integrase-type DNA-binding superfamily protein	[more]
AT1G12630.1	3.9e-45	52.43	Integrase-type DNA-binding superfamily protein	[more]
AT2G36450.1	9.2e-39	49.72	Integrase-type DNA-binding superfamily protein	[more]
AT4G25490.1	2.7e-30	46.86	C-repeat/DRE binding factor 1	[more]
AT5G51990.1	6.6e-29	42.05	C-repeat-binding factor 4	[more]

BLAST of ClCG10G003710 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659096218\|ref\|XP_008448976.1\|	1.8e-76	83.93	PREDICTED: ethylene-responsive transcription factor ERF026-like [Cucumis melo]	[more]
gi\|700200839\|gb\|KGN55972.1\|	8.1e-61	76.40	hypothetical protein Csa_3G042390 [Cucumis sativus]	[more]
gi\|590677807\|ref\|XP_007040122.1\|	1.4e-52	64.29	Integrase-type DNA-binding superfamily protein [Theobroma cacao]	[more]
gi\|702332514\|ref\|XP_010054789.1\|	3.4e-51	60.99	PREDICTED: ethylene-responsive transcription factor ERF025-like [Eucalyptus gran...	[more]
gi\|410108797\|gb\|AFV60733.1\|	5.8e-51	65.27	ethylene-responsive transcription factor 1 [Carica papaya]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR016177	DNA-bd_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0019760	glucosinolate metabolic process
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0043565	sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G003710.1	ClCG10G003710.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 12..69 score: 2.8
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 12..60 score: 3.4
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 12..74 score: 5.4
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 12..68 score: 19
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 12..69 score: 2.94
None	No IPR available	PANTHER	PTHR31985	FAMILY NOT NAMED	coord: 3..168 score: 1.8
None	No IPR available	PANTHER	PTHR31985:SF9	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF025-RELATED	coord: 3..168 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG10G003710	Csa3G042390	Cucumber (Chinese Long) v2	cuwcgB189
ClCG10G003710	Csa5G155560	Cucumber (Chinese Long) v2	cuwcgB351
ClCG10G003710	MELO3C014053	Melon (DHL92) v3.5.1	mewcgB415
ClCG10G003710	MELO3C005630	Melon (DHL92) v3.5.1	mewcgB005
ClCG10G003710	Cla011487	Watermelon (97103) v1	wcgwmB071
ClCG10G003710	Cla004419	Watermelon (97103) v1	wcgwmB057
ClCG10G003710	Cla97C10G188260	Watermelon (97103) v2	wcgwmbB038
ClCG10G003710	Cla97C01G003210	Watermelon (97103) v2	wcgwmbB036
ClCG10G003710	CSPI05G05860	Wild cucumber (PI 183967)	cpiwcgB368
ClCG10G003710	CSPI03G03650	Wild cucumber (PI 183967)	cpiwcgB190
ClCG10G003710	Cucsa.302760	Cucumber (Gy14) v1	cgywcgB519
ClCG10G003710	Cucsa.041590	Cucumber (Gy14) v1	cgywcgB018
ClCG10G003710	CmaCh06G007100	Cucurbita maxima (Rimu)	cmawcgB727
ClCG10G003710	CmaCh16G010110	Cucurbita maxima (Rimu)	cmawcgB285
ClCG10G003710	CmoCh16G010510	Cucurbita moschata (Rifu)	cmowcgB280
ClCG10G003710	CmoCh15G012620	Cucurbita moschata (Rifu)	cmowcgB235
ClCG10G003710	CmoCh06G007280	Cucurbita moschata (Rifu)	cmowcgB730
ClCG10G003710	Lsi07G014120	Bottle gourd (USVL1VR-Ls)	lsiwcgB389
ClCG10G003710	CsGy5G003130	Cucumber (Gy14) v2	cgybwcgB326
ClCG10G003710	CsGy3G003650	Cucumber (Gy14) v2	cgybwcgB174
ClCG10G003710	MELO3C005630.2	Melon (DHL92) v3.6.1	medwcgB004
ClCG10G003710	MELO3C014053.2	Melon (DHL92) v3.6.1	medwcgB401
ClCG10G003710	Carg16657	Silver-seed gourd	carwcgB0911
ClCG10G003710	Carg25221	Silver-seed gourd	carwcgB0016
ClCG10G003710	Carg21649	Silver-seed gourd	carwcgB0842
ClCG10G003710	CsaV3_3G003710	Cucumber (Chinese Long) v3	cucwcgB194
ClCG10G003710	CsaV3_5G003240	Cucumber (Chinese Long) v3	cucwcgB374

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
ClCG10G003710	ClCG00G000870	Watermelon (Charleston Gray)	wcgwcgB001
ClCG10G003710	ClCG01G003110	Watermelon (Charleston Gray)	wcgwcgB041

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG10G003710	Wax gourd	wcgwgoB080
ClCG10G003710	Cucurbita moschata (Rifu)	cmowcgB277
ClCG10G003710	Watermelon (97103) v1	wcgwmB062
ClCG10G003710	Cucurbita pepo (Zucchini)	cpewcgB194
ClCG10G003710	Cucurbita pepo (Zucchini)	cpewcgB766
ClCG10G003710	Melon (DHL92) v3.6.1	medwcgB404