Csa1G086930 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G086930
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPentatricopeptide repeat-containing protein; contains IPR002885 (Pentatricopeptide repeat)
LocationChr1 : 8256645 .. 8258420 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCGTCTCTTCCCTCTCCGAGTGACCTGTTTCTCCTCCTCTTCTCCACCAAAAGTTTTGGGCTTTGTATTTGTGTGTTCTAATCTCTCTTCATTTCTCAGAATTCAGTTCCATTTGACTCTGTGTTGAGTTTGTTCTTGTGCTTGTTTTCAGTATTTTGTACAATATGAACCTCCTCCTTCGAATTCGCATTCACTTCTCAACCAATTCCATTGACCACCTCTTTAATTCCAACCCATCATATCCACATTTCGTTTGTTTCAGAAGATTTTCGATTCATTCCTGGTGGTTGAACAATACCCATCATTATAACCTCCCCCATTTTCTCCGTGTATCTCAAATCCATCCCTACTCAGGTCCCAACCTCTCTTTTACGAATTTTCTTTTGAAATTCTATTCAAGGGCGGCACCTTCAAGATCTTTCCGGAAGAGAGCGAATAAGAGGTTGAAATCCAGCCTCAAACCTAAACTGGACGAAACCCAATTTCAGTTAGCAGTTTCGAAAATCCCTCCGAGGTTTACCTCTGAAGAACTCTGTAATGTAATTTCTCTCCAAAGAGATCCTTTGGTTTGTTTTGAGTTGTTCAATTGGGCTTCACAGCAGCCTCGTTTCAGACATGATGATTCCTCTTATGAGATTACAATTAAGAAGCTGGGTGAGGCGAAAATGTATGAAGAAATGGATCATGTTGTGAATCAGGCGCTTGCTGTTTCTTCTATTGGTTCTGAGACTCTTTACAATACTATGATATATTTTTTCACTGAGGCAAGGAAGTTGACTAGAGCTGTCAATATATTTAAGCATATGCAGAACAATAGAAACTTGAACTGTAGGCCTTCAATTAGAACATATAATCTACTTTTTACTGCATTCTTGAGTCGAGGTCGTAATACTTATATAAATCATATGTATATGGAGACTATCAGATGTCTCTTCAGACAGATGGTGAATGATGATGGGATTGAACCTGATATATTTAGTTTGAATTGTATGATAAAGGGCTATGTGCTTTCCCTGCATGTTAATGATGCGCTTAGGATCTTTCACCAAATGGGGGTTGTGTATAGCTGCTTACCAAATTCATATTCCTTTGACTATTTGATTCATGGGTTATGCGCCCAAGCTCGTACCGATAATGCAAAGGAATTGTGTAATGAAATGAAGGAAAAGGGGTTTGTGCCTAGTAGTATTTCGTATAATTCAATTGTGAATGCTCTGGCTCTCAATGGAGAGGTTGAAGATGCAGTGAATTATTTGTGGGAGATGATTGATAATAGAAGATCTCCTGATTTTATTACGTATAAGACAGTATTGGACGAACTGTGTAGACAAGGGAAGGTGGTTGAAGCCACGAGTTTGTTGAGGGAATTGCAAGAGAAGGATCTTGTGGATGGTCATACTTATAGGAAACTTCTCTATGTGCTTGAAGATGATTATGGAAATCTAAATTGATGGCTGACCACGATTGAGCTCATGGACCATGTGGTCTTAGAAGGCAGGACTTACGTGTGAAATTTGATGTCAGAACCACAAAGCGTCTTAGTCAGACTGTGCAGATAGAAAACCAATCTGTGTGATTTCTGTTTTCCCAATTGTACTTGTTTATCCATTGAAGGTTTAAGACTTACAGGTGCCATTTACTAAAAGGTTAAAAACCTATGATATTTATCCAGACGCTCAGCTTCATATAGTTCTAAATTAAGAAGGCTACTGGTGCATACCTTTTGTGGTTCACACACGGCTTATAAATTCTACAATTATTAGTCAATCGGTGAG

mRNA sequence

ATGAACCTCCTCCTTCGAATTCGCATTCACTTCTCAACCAATTCCATTGACCACCTCTTTAATTCCAACCCATCATATCCACATTTCGTTTGTTTCAGAAGATTTTCGATTCATTCCTGGTGGTTGAACAATACCCATCATTATAACCTCCCCCATTTTCTCCGTGTATCTCAAATCCATCCCTACTCAGGTCCCAACCTCTCTTTTACGAATTTTCTTTTGAAATTCTATTCAAGGGCGGCACCTTCAAGATCTTTCCGGAAGAGAGCGAATAAGAGGTTGAAATCCAGCCTCAAACCTAAACTGGACGAAACCCAATTTCAGTTAGCAGTTTCGAAAATCCCTCCGAGGTTTACCTCTGAAGAACTCTGTAATGTAATTTCTCTCCAAAGAGATCCTTTGGTTTGTTTTGAGTTGTTCAATTGGGCTTCACAGCAGCCTCGTTTCAGACATGATGATTCCTCTTATGAGATTACAATTAAGAAGCTGGGTGAGGCGAAAATGTATGAAGAAATGGATCATGTTGTGAATCAGGCGCTTGCTGTTTCTTCTATTGGTTCTGAGACTCTTTACAATACTATGATATATTTTTTCACTGAGGCAAGGAAGTTGACTAGAGCTGTCAATATATTTAAGCATATGCAGAACAATAGAAACTTGAACTGTAGGCCTTCAATTAGAACATATAATCTACTTTTTACTGCATTCTTGAGTCGAGGTCGTAATACTTATATAAATCATATGTATATGGAGACTATCAGATGTCTCTTCAGACAGATGGTGAATGATGATGGGATTGAACCTGATATATTTAGTTTGAATTGTATGATAAAGGGCTATGTGCTTTCCCTGCATGTTAATGATGCGCTTAGGATCTTTCACCAAATGGGGGTTGTGTATAGCTGCTTACCAAATTCATATTCCTTTGACTATTTGATTCATGGGTTATGCGCCCAAGCTCGTACCGATAATGCAAAGGAATTGTGTAATGAAATGAAGGAAAAGGGGTTTGTGCCTAGTAGTATTTCGTATAATTCAATTGTGAATGCTCTGGCTCTCAATGGAGAGGTTGAAGATGCAGTGAATTATTTGTGGGAGATGATTGATAATAGAAGATCTCCTGATTTTATTACGTATAAGACAGTATTGGACGAACTGTGTAGACAAGGGAAGGTGGTTGAAGCCACGAGTTTGTTGAGGGAATTGCAAGAGAAGGATCTTGTGGATGGTCATACTTATAGGAAACTTCTCTATGTGCTTGAAGATGATTATGGAAATCTAAATTGA

Coding sequence (CDS)

ATGAACCTCCTCCTTCGAATTCGCATTCACTTCTCAACCAATTCCATTGACCACCTCTTTAATTCCAACCCATCATATCCACATTTCGTTTGTTTCAGAAGATTTTCGATTCATTCCTGGTGGTTGAACAATACCCATCATTATAACCTCCCCCATTTTCTCCGTGTATCTCAAATCCATCCCTACTCAGGTCCCAACCTCTCTTTTACGAATTTTCTTTTGAAATTCTATTCAAGGGCGGCACCTTCAAGATCTTTCCGGAAGAGAGCGAATAAGAGGTTGAAATCCAGCCTCAAACCTAAACTGGACGAAACCCAATTTCAGTTAGCAGTTTCGAAAATCCCTCCGAGGTTTACCTCTGAAGAACTCTGTAATGTAATTTCTCTCCAAAGAGATCCTTTGGTTTGTTTTGAGTTGTTCAATTGGGCTTCACAGCAGCCTCGTTTCAGACATGATGATTCCTCTTATGAGATTACAATTAAGAAGCTGGGTGAGGCGAAAATGTATGAAGAAATGGATCATGTTGTGAATCAGGCGCTTGCTGTTTCTTCTATTGGTTCTGAGACTCTTTACAATACTATGATATATTTTTTCACTGAGGCAAGGAAGTTGACTAGAGCTGTCAATATATTTAAGCATATGCAGAACAATAGAAACTTGAACTGTAGGCCTTCAATTAGAACATATAATCTACTTTTTACTGCATTCTTGAGTCGAGGTCGTAATACTTATATAAATCATATGTATATGGAGACTATCAGATGTCTCTTCAGACAGATGGTGAATGATGATGGGATTGAACCTGATATATTTAGTTTGAATTGTATGATAAAGGGCTATGTGCTTTCCCTGCATGTTAATGATGCGCTTAGGATCTTTCACCAAATGGGGGTTGTGTATAGCTGCTTACCAAATTCATATTCCTTTGACTATTTGATTCATGGGTTATGCGCCCAAGCTCGTACCGATAATGCAAAGGAATTGTGTAATGAAATGAAGGAAAAGGGGTTTGTGCCTAGTAGTATTTCGTATAATTCAATTGTGAATGCTCTGGCTCTCAATGGAGAGGTTGAAGATGCAGTGAATTATTTGTGGGAGATGATTGATAATAGAAGATCTCCTGATTTTATTACGTATAAGACAGTATTGGACGAACTGTGTAGACAAGGGAAGGTGGTTGAAGCCACGAGTTTGTTGAGGGAATTGCAAGAGAAGGATCTTGTGGATGGTCATACTTATAGGAAACTTCTCTATGTGCTTGAAGATGATTATGGAAATCTAAATTGA

Protein sequence

MNLLLRIRIHFSTNSIDHLFNSNPSYPHFVCFRRFSIHSWWLNNTHHYNLPHFLRVSQIHPYSGPNLSFTNFLLKFYSRAAPSRSFRKRANKRLKSSLKPKLDETQFQLAVSKIPPRFTSEELCNVISLQRDPLVCFELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYFFTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATSLLRELQEKDLVDGHTYRKLLYVLEDDYGNLN*
Homology
[Close]
BLAST of Csa1G086930 vs. Swiss-Prot
Match: PP173_ARATH (Pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Arabidopsis thaliana GN=At2g27800 PE=3 SV=2)

HSP 1 Score: 465.7 bits (1197), Expect = 5.5e-130
Identity = 222/347 (63.98%), Postives = 278/347 (80.12%), Query Frame = 1 

Query: 77  YSRAAPSRSFRKRANKRLKSSLKPKLDETQFQLAVSKIPPRFTSEELCNVISLQRDPLVC 136
           YS + P+RS R+R + R KSS KP L+ ++F   +SK+PPRFT EEL + I+L+ DP +C
Sbjct: 96  YSTSVPTRSLRRRISNRKKSSAKPILNVSKFHETISKLPPRFTPEELADAITLEEDPFLC 155

Query: 137 FELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIY 196
           F LFNWASQQPRF H++ SY I I+KLG AKMY+EMD +VNQ L+V  IG+E LYN++I+
Sbjct: 156 FHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIF 215

Query: 197 FFTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNTYINHMYMETIRCL 256
           +FT+A KL RAVNIF+HM  ++NL CRP+IRTY++LF A L RG N+YINH+YMET+R L
Sbjct: 216 YFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSL 275

Query: 257 FRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGL 316
           FRQMV D GIEPD+F+LNC++KGYVLSLHVNDALRIFHQM VVY C PNS+++DYLIHGL
Sbjct: 276 FRQMV-DSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGL 335

Query: 317 CAQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDF 376
           CAQ RT NA+EL +EMK KGFVP+  SYNS+VNA AL+GE++DAV  LWEMI+N R  DF
Sbjct: 336 CAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDF 395

Query: 377 ITYKTVLDELCRQGKVVEATSLLRELQEKDLVDGHTYRKLLYVLEDD 424
           I+Y+T++DE CR+GK  EAT LL  L+EK LVD  +Y KL+ VL  D
Sbjct: 396 ISYRTLVDESCRKGKYDEATRLLEMLREKQLVDRDSYDKLVNVLHKD 441

[Close]
BLAST of Csa1G086930 vs. Swiss-Prot
Match: PP298_ARATH (Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidopsis thaliana GN=At4g01400 PE=2 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 2.4e-24
Identity = 76/278 (27.34%), Postives = 143/278 (51.44%), Query Frame = 1 

Query: 126 VISLQRDPLVCFELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQALAVSSI 185
           +I+ Q DPL+  E+F++ASQQP FRH  SS+ I I KLG  + +  +D V+ +  +    
Sbjct: 57  LIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYP 116

Query: 186 GSETLYNTMIYFFTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLS-RGRNTY 245
            +  ++  +I  + EA+   + ++ F  M      N  P  +  N +    +S RG    
Sbjct: 117 LTGEIFTYLIKVYAEAKLPEKVLSTFYKMLE---FNFTPQPKHLNRILDVLVSHRG---- 176

Query: 246 INHMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVYSCLP 305
               Y++    LF+      G+ P+  S N +++ + L+  ++ A ++F +M +    +P
Sbjct: 177 ----YLQKAFELFKSS-RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKM-LERDVVP 236

Query: 306 NSYSFDYLIHGLCAQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDAVNYL 365
           +  S+  LI G C + + + A EL ++M  KGFVP  +SY +++N+L    ++ +A   L
Sbjct: 237 DVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLL 296

Query: 366 WEMIDNRRSPDFITYKTVLDELCRQGKVVEATSLLREL 403
             M     +PD + Y T++   CR+ + ++A  +L ++
Sbjct: 297 CRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDM 321


HSP 2 Score: 84.7 bits (208), Expect = 2.6e-15
Identity = 72/264 (27.27%), Postives = 120/264 (45.45%), Query Frame = 1 

Query: 150 RHDDSSYEIT-------IKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYFFTEAR 209
           +H  S Y +T       IK   EAK+ E++     + L  +        N ++      R
Sbjct: 109 KHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHR 168

Query: 210 K-LTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNTYINHMYMETIRCLFRQMV 269
             L +A  +FK   ++R     P+ R+YNLL  AF     N  ++  Y      LF +M+
Sbjct: 169 GYLQKAFELFK---SSRLHGVMPNTRSYNLLMQAFCL---NDDLSIAYQ-----LFGKML 228

Query: 270 NDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLCAQAR 329
             D + PD+ S   +I+G+     VN A+ +   M +    +P+  S+  L++ LC + +
Sbjct: 229 ERD-VVPDVDSYKILIQGFCRKGQVNGAMELLDDM-LNKGFVPDRLSYTTLLNSLCRKTQ 288

Query: 330 TDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDFITYKT 389
              A +L   MK KG  P  + YN+++          DA   L +M+ N  SP+ ++Y+T
Sbjct: 289 LREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRT 348

Query: 390 VLDELCRQGKVVEATSLLRELQEK 406
           ++  LC QG   E    L E+  K
Sbjct: 349 LIGGLCDQGMFDEGKKYLEEMISK 359

[Close]
BLAST of Csa1G086930 vs. Swiss-Prot
Match: PPR12_ARATH (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 4.5e-23
Identity = 73/248 (29.44%), Postives = 119/248 (47.98%), Query Frame = 1 

Query: 160 IKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYFFTEARKLTRAVNIFKHMQNNRN 219
           I KL EA+  E    ++ Q +   ++    +Y T+I  F +   +  A   F  M +   
Sbjct: 329 ICKLAEAE--EAFSEMIRQGILPDTV----VYTTLIDGFCKRGDIRAASKFFYEMHSR-- 388

Query: 220 LNCRPSIRTYNLLFTAFLSRGRNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKG 279
            +  P + TY  + + F   G       ++ E   C         G+EPD  +   +I G
Sbjct: 389 -DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF-C--------KGLEPDSVTFTELING 448

Query: 280 YVLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGFVP 339
           Y  + H+ DA R+ + M +   C PN  ++  LI GLC +   D+A EL +EM + G  P
Sbjct: 449 YCKAGHMKDAFRVHNHM-IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 508

Query: 340 SSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATSLL 399
           +  +YNSIVN L  +G +E+AV  + E      + D +TY T++D  C+ G++ +A  +L
Sbjct: 509 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 557

Query: 400 RELQEKDL 408
           +E+  K L
Sbjct: 569 KEMLGKGL 557


HSP 2 Score: 74.3 bits (181), Expect = 3.6e-12
Identity = 46/194 (23.71%), Postives = 91/194 (46.91%), Query Frame = 1 

Query: 225 SIRTYNLLFTAFLSRGRNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSL 284
           ++ +YN++       GR    +H+ +         ++   G  PD+ S + ++ GY    
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLL---------LMELKGYTPDVISYSTVVNGYCRFG 304

Query: 285 HVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGFVPSSISY 344
            ++   ++   M       PNSY +  +I  LC   +   A+E  +EM  +G +P ++ Y
Sbjct: 305 ELDKVWKLIEVMKRK-GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVY 364

Query: 345 NSIVNALALNGEVEDAVNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATSLLRELQE 404
            ++++     G++  A  + +EM     +PD +TY  ++   C+ G +VEA  L  E+  
Sbjct: 365 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 424

Query: 405 KDL-VDGHTYRKLL 418
           K L  D  T+ +L+
Sbjct: 425 KGLEPDSVTFTELI 428


HSP 3 Score: 40.0 bits (92), Expect = 7.4e-02
Identity = 24/87 (27.59%), Postives = 43/87 (49.43%), Query Frame = 1 

Query: 321 RTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDFITYK 380
           +T  A  +  E  E G   +  SYN +++ +   G +++A + L  M     +PD I+Y 
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 285

Query: 381 TVLDELCRQGKVVEATSLLRELQEKDL 408
           TV++  CR G++ +   L+  ++ K L
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGL 312

[Close]
BLAST of Csa1G086930 vs. Swiss-Prot
Match: PPR28_ARATH (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.3e-22
Identity = 68/228 (29.82%), Postives = 111/228 (48.68%), Query Frame = 1 

Query: 191 YNTMIYFFTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNTYINHMYM 250
           YN ++    +  +L  A+     M ++    C+P++ T+N++  +  S GR      +  
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSS---GCQPNVITHNIILRSMCSTGRWMDAEKLLA 336

Query: 251 ETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFD 310
           + +R          G  P + + N +I        +  A+ I  +M   + C PNS S++
Sbjct: 337 DMLR---------KGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQ-HGCQPNSLSYN 396

Query: 311 YLIHGLCAQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDAVNYLWEMIDN 370
            L+HG C + + D A E    M  +G  P  ++YN+++ AL  +G+VEDAV  L ++   
Sbjct: 397 PLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 456

Query: 371 RRSPDFITYKTVLDELCRQGKVVEATSLLRELQEKDL-VDGHTYRKLL 418
             SP  ITY TV+D L + GK  +A  LL E++ KDL  D  TY  L+
Sbjct: 457 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491


HSP 2 Score: 86.7 bits (213), Expect = 6.9e-16
Identity = 60/254 (23.62%), Postives = 114/254 (44.88%), Query Frame = 1 

Query: 152 DDSSYEITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYFFTEARKLTRAVNIF 211
           D  +Y   ++ L ++   ++   V+++ L          Y  +I        +  A+ + 
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLL 262

Query: 212 KHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNTYINHMYMETIRCLFRQMVNDDGIEPDIF 271
             M   R+  C P + TYN+L       GR         E I+  F   +   G +P++ 
Sbjct: 263 DEM---RDRGCTPDVVTYNVLVNGICKEGRLD-------EAIK--FLNDMPSSGCQPNVI 322

Query: 272 SLNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLCAQARTDNAKELCNE 331
           + N +++    +    DA ++   M +     P+  +F+ LI+ LC +     A ++  +
Sbjct: 323 THNIILRSMCSTGRWMDAEKLLADM-LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEK 382

Query: 332 MKEKGFVPSSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDFITYKTVLDELCRQGK 391
           M + G  P+S+SYN +++      +++ A+ YL  M+     PD +TY T+L  LC+ GK
Sbjct: 383 MPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 442

Query: 392 VVEATSLLRELQEK 406
           V +A  +L +L  K
Sbjct: 443 VEDAVEILNQLSSK 443


HSP 3 Score: 80.9 bits (198), Expect = 3.8e-14
Identity = 49/180 (27.22%), Postives = 87/180 (48.33%), Query Frame = 1 

Query: 224 PSIRTYNLLFTAFLSRGRNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLS 283
           PS+ T+N+L      +G       +    I  L  + +   G +P+  S N ++ G+   
Sbjct: 342 PSVVTFNILINFLCRKG-------LLGRAIDIL--EKMPQHGCQPNSLSYNPLLHGFCKE 401

Query: 284 LHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGFVPSSIS 343
             ++ A+    +M V   C P+  +++ ++  LC   + ++A E+ N++  KG  P  I+
Sbjct: 402 KKMDRAIEYLERM-VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 461

Query: 344 YNSIVNALALNGEVEDAVNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATSLLRELQ 403
           YN++++ LA  G+   A+  L EM      PD ITY +++  L R+GKV EA     E +
Sbjct: 462 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE 511


HSP 4 Score: 80.1 bits (196), Expect = 6.5e-14
Identity = 58/245 (23.67%), Postives = 110/245 (44.90%), Query Frame = 1 

Query: 155 SYEITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYFFTEARKLTRAVNIFKHM 214
           ++ I ++ +     + + + ++   L      S   +N +I F      L RA++I + M
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370

Query: 215 QNNRNLNCRPSIRTYNLLFTAFLSRGRNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLN 274
             +    C+P+  +YN L   F    +        M+       +MV+  G  PDI + N
Sbjct: 371 PQH---GCQPNSLSYNPLLHGFCKEKK--------MDRAIEYLERMVSR-GCYPDIVTYN 430

Query: 275 CMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKE 334
            M+        V DA+ I +Q+     C P   +++ +I GL    +T  A +L +EM+ 
Sbjct: 431 TMLTALCKDGKVEDAVEILNQLSSK-GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA 490

Query: 335 KGFVPSSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVE 394
           K   P +I+Y+S+V  L+  G+V++A+ +  E       P+ +T+ +++  LC+  +   
Sbjct: 491 KDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDR 542

Query: 395 ATSLL 400
           A   L
Sbjct: 551 AIDFL 542


HSP 5 Score: 77.4 bits (189), Expect = 4.2e-13
Identity = 38/144 (26.39%), Postives = 74/144 (51.39%), Query Frame = 1 

Query: 259 QMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLCA 318
           +++   G  PD+ + N MI GY  +  +N+AL +  +M V     P+  +++ ++  LC 
Sbjct: 161 EILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS----PDVVTYNTILRSLCD 220

Query: 319 QARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDFIT 378
             +   A E+ + M ++   P  I+Y  ++ A   +  V  A+  L EM D   +PD +T
Sbjct: 221 SGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVT 280

Query: 379 YKTVLDELCRQGKVVEATSLLREL 403
           Y  +++ +C++G++ EA   L ++
Sbjct: 281 YNVLVNGICKEGRLDEAIKFLNDM 300


HSP 6 Score: 61.2 bits (147), Expect = 3.1e-08
Identity = 39/129 (30.23%), Postives = 63/129 (48.84%), Query Frame = 1 

Query: 298 VVYSCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEV 357
           V +  +P+      LI G C   +T  A ++   ++  G VP  I+YN +++     GE+
Sbjct: 129 VYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEI 188

Query: 358 EDAVNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATSLLRELQEKDLV-DGHTYRKL 417
            +A++ L  M     SPD +TY T+L  LC  GK+ +A  +L  + ++D   D  TY  L
Sbjct: 189 NNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTIL 248

Query: 418 LYVLEDDYG 426
           +     D G
Sbjct: 249 IEATCRDSG 254


HSP 7 Score: 48.9 bits (115), Expect = 1.6e-04
Identity = 47/190 (24.74%), Postives = 74/190 (38.95%), Query Frame = 1 

Query: 152 DDSSYEITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYFFTEARKLTRAVNIF 211
           D  +Y   +  L +    E+   ++NQ  +         YNT+I    +A K  +A+ + 
Sbjct: 413 DIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLL 472

Query: 212 KHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNTYINHMYMETIRCLFRQMVNDDGIEPDIF 271
             M   R  + +P   TY+ L       G+       + E     F +M    GI P+  
Sbjct: 473 DEM---RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE-----FERM----GIRPNAV 532

Query: 272 SLNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLCAQARTDNAKELCNE 331
           + N ++ G   S   + A+     M +   C PN  S+  LI GL  +     A EL NE
Sbjct: 533 TFNSIMLGLCKSRQTDRAIDFLVFM-INRGCKPNETSYTILIEGLAYEGMAKEALELLNE 589

Query: 332 MKEKGFVPSS 342
           +  KG +  S
Sbjct: 593 LCNKGLMKKS 589

[Close]
BLAST of Csa1G086930 vs. Swiss-Prot
Match: PP158_ARATH (Pentatricopeptide repeat-containing protein At2g17140 OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.7e-22
Identity = 71/277 (25.63%), Postives = 136/277 (49.10%), Query Frame = 1 

Query: 132 DPLVCFELFNWASQQPRFRHDDSSYEIT---IKKLGEAKMYEEMDHVVNQALAVSSIGSE 191
           +P + + +F      P       S + T    + L  AKM+EE+  + N  L+ SSI   
Sbjct: 15  NPRLAWRIFKRIFSSPSEESHGISLDATPTIARILVRAKMHEEIQELHNLILS-SSIQKT 74

Query: 192 TLYN--TMIYFFTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNTYIN 251
            L +  +++  F ++  + +A   F+ +++    N +PS+  YNLL  + +   R  +++
Sbjct: 75  KLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPEN-KPSVYLYNLLLESCIKERRVEFVS 134

Query: 252 HMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNS 311
            +Y + + C         GI P  ++ N +I+    S  V+ A  +F +M     C PN 
Sbjct: 135 WLYKDMVLC---------GIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEK-GCKPNE 194

Query: 312 YSFDYLIHGLCAQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDAVNYLWE 371
           ++F  L+ G C    TD   EL N M+  G +P+ + YN+IV++    G  +D+   + +
Sbjct: 195 FTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEK 254

Query: 372 MIDNRRSPDFITYKTVLDELCRQGKVVEATSLLRELQ 404
           M +    PD +T+ + +  LC++GKV++A+ +  +++
Sbjct: 255 MREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDME 279


HSP 2 Score: 92.4 bits (228), Expect = 1.3e-17
Identity = 71/281 (25.27%), Postives = 121/281 (43.06%), Query Frame = 1 

Query: 150 RHDDSSYEITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYFFTEARKLTRAVN 209
           R +  +Y + +K   +  + E+   +         + S   YN  +       K   A  
Sbjct: 288 RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAET 347

Query: 210 IFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNTYINHMYMETIRCLFRQMVNDDGIEPD 269
           + K M +       PSI +YN+L       G  +       +TI  L ++    +G+ PD
Sbjct: 348 VLKQMTDK---GIGPSIYSYNILMDGLCKLGMLSDA-----KTIVGLMKR----NGVCPD 407

Query: 270 IFSLNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLCAQARTDNAKELC 329
             +  C++ GY     V+ A  +  +M +  +CLPN+Y+ + L+H L    R   A+EL 
Sbjct: 408 AVTYGCLLHGYCSVGKVDAAKSLLQEM-MRNNCLPNAYTCNILLHSLWKMGRISEAEELL 467

Query: 330 NEMKEKGFVPSSISYNSIVNALALNGEVEDAVNYLWEM---------------------- 389
            +M EKG+   +++ N IV+ L  +GE++ A+  +  M                      
Sbjct: 468 RKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDS 527

Query: 390 -IDNRRSPDFITYKTVLDELCRQGKVVEATSLLRELQEKDL 408
            I+N   PD ITY T+L+ LC+ G+  EA +L  E+  + L
Sbjct: 528 LIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKL 555


HSP 3 Score: 79.3 bits (194), Expect = 1.1e-13
Identity = 55/221 (24.89%), Postives = 105/221 (47.51%), Query Frame = 1 

Query: 190 LYNTMIYFFTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNTYINHMY 249
           LYN ++    + R++     ++K M         P   T+NLL  A              
Sbjct: 114 LYNLLLESCIKERRVEFVSWLYKDMVL---CGIAPQTYTFNLLIRALCDSS--------C 173

Query: 250 METIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSF 309
           ++  R LF +M  + G +P+ F+   +++GY  +   +  L + + M   +  LPN   +
Sbjct: 174 VDAARELFDEMP-EKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMES-FGVLPNKVIY 233

Query: 310 DYLIHGLCAQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDAVNYLWEM-I 369
           + ++   C + R D+++++  +M+E+G VP  +++NS ++AL   G+V DA     +M +
Sbjct: 234 NTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMEL 293

Query: 370 DNRRS---PDFITYKTVLDELCRQGKVVEATSLLRELQEKD 407
           D       P+ ITY  +L   C+ G + +A +L   ++E D
Sbjct: 294 DEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREND 321


HSP 4 Score: 72.4 bits (176), Expect = 1.4e-11
Identity = 42/152 (27.63%), Postives = 80/152 (52.63%), Query Frame = 1 

Query: 260 MVNDDGIE----PDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHG 319
           +V+D  IE    PD+ + + ++ G   +    +A  +F +M +     P+S +++  IH 
Sbjct: 510 LVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEM-MGEKLQPDSVAYNIFIHH 569

Query: 320 LCAQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPD 379
            C Q +  +A  +  +M++KG   S  +YNS++  L +  ++ +    + EM +   SP+
Sbjct: 570 FCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPN 629

Query: 380 FITYKTVLDELCRQGKVVEATSLLRELQEKDL 408
             TY T +  LC   KV +AT+LL E+ +K++
Sbjct: 630 ICTYNTAIQYLCEGEKVEDATNLLDEMMQKNI 660


HSP 5 Score: 70.9 bits (172), Expect = 3.9e-11
Identity = 65/273 (23.81%), Postives = 123/273 (45.05%), Query Frame = 1 

Query: 152 DDSSYEITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYFFTEARKLTRAVNIF 211
           ++ ++ I ++   +A + ++   ++N   +   + ++ +YNT++  F    +   +  + 
Sbjct: 181 NEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMV 240

Query: 212 KHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNTYINHMYMETIRCLFRQMVNDDGI---EP 271
           + M   R     P I T+N   +A    G+        ++  R +F  M  D+ +    P
Sbjct: 241 EKM---REEGLVPDIVTFNSRISALCKEGK-------VLDASR-IFSDMELDEYLGLPRP 300

Query: 272 DIFSLNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLCAQARTDNAKEL 331
           +  + N M+KG+     + DA  +F  +      L +  S++  + GL    +   A+ +
Sbjct: 301 NSITYNLMLKGFCKVGLLEDAKTLFESIRE-NDDLASLQSYNIWLQGLVRHGKFIEAETV 360

Query: 332 CNEMKEKGFVPSSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDFITYKTVLDELCR 391
             +M +KG  PS  SYN +++ L   G + DA   +  M  N   PD +TY  +L   C 
Sbjct: 361 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 420

Query: 392 QGKVVEATSLLRELQEKD-LVDGHTYRKLLYVL 421
            GKV  A SLL+E+   + L + +T   LL+ L
Sbjct: 421 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSL 441


HSP 6 Score: 68.9 bits (167), Expect = 1.5e-10
Identity = 43/168 (25.60%), Postives = 76/168 (45.24%), Query Frame = 1 

Query: 221 NCRPSIRTYNLLFTAFLSRGRNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKGY 280
           NC P + TY+ L       GR     +++ E +          + ++PD  + N  I  +
Sbjct: 519 NCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMM---------GEKLQPDSVAYNIFIHHF 578

Query: 281 VLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGFVPS 340
                ++ A R+   M     C  +  +++ LI GL  + +      L +EMKEKG  P+
Sbjct: 579 CKQGKISSAFRVLKDMEKK-GCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPN 638

Query: 341 SISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDFITYKTVLDELCR 389
             +YN+ +  L    +VEDA N L EM+    +P+  ++K +++  C+
Sbjct: 639 ICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK 676


HSP 7 Score: 47.0 bits (110), Expect = 6.1e-04
Identity = 46/191 (24.08%), Postives = 75/191 (39.27%), Query Frame = 1 

Query: 214 MQNNRNLNCRPSIRTYNLLFTAFLSRGRNTYINHMYMETIRCLFRQMVNDDGIEPDIFSL 273
           M   +     P+I TYN     +L  G         +E    L  +M+  + I P++FS 
Sbjct: 617 MDEMKEKGISPNICTYNTAIQ-YLCEGEK-------VEDATNLLDEMMQKN-IAPNVFSF 676

Query: 274 NCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLCAQARTDNAKELCNEMK 333
             +I+ +      + A  +F     V  C      +  + + L A  +   A EL   + 
Sbjct: 677 KYLIEAFCKVPDFDMAQEVFET--AVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVL 736

Query: 334 EKGFVPSSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDFITYKTVLDELCRQGKVV 393
           ++GF   +  Y  +V +L    E+E A   L +MID     D      V+D L + G   
Sbjct: 737 DRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKK 796

Query: 394 EATSLLRELQE 405
           EA S   ++ E
Sbjct: 797 EANSFADKMME 796

[Close]
BLAST of Csa1G086930 vs. TrEMBL
Match: A0A0A0LS50_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G086930 PE=4 SV=1)

HSP 1 Score: 879.0 bits (2270), Expect = 2.3e-252
Identity = 428/428 (100.00%), Postives = 428/428 (100.00%), Query Frame = 1 

Query: 1   MNLLLRIRIHFSTNSIDHLFNSNPSYPHFVCFRRFSIHSWWLNNTHHYNLPHFLRVSQIH 60
           MNLLLRIRIHFSTNSIDHLFNSNPSYPHFVCFRRFSIHSWWLNNTHHYNLPHFLRVSQIH
Sbjct: 1   MNLLLRIRIHFSTNSIDHLFNSNPSYPHFVCFRRFSIHSWWLNNTHHYNLPHFLRVSQIH 60

Query: 61  PYSGPNLSFTNFLLKFYSRAAPSRSFRKRANKRLKSSLKPKLDETQFQLAVSKIPPRFTS 120
           PYSGPNLSFTNFLLKFYSRAAPSRSFRKRANKRLKSSLKPKLDETQFQLAVSKIPPRFTS
Sbjct: 61  PYSGPNLSFTNFLLKFYSRAAPSRSFRKRANKRLKSSLKPKLDETQFQLAVSKIPPRFTS 120

Query: 121 EELCNVISLQRDPLVCFELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQAL 180
           EELCNVISLQRDPLVCFELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQAL
Sbjct: 121 EELCNVISLQRDPLVCFELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQAL 180

Query: 181 AVSSIGSETLYNTMIYFFTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240
           AVSSIGSETLYNTMIYFFTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG
Sbjct: 181 AVSSIGSETLYNTMIYFFTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240

Query: 241 RNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVY 300
           RNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVY
Sbjct: 241 RNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVY 300

Query: 301 SCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDA 360
           SCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDA
Sbjct: 301 SCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDA 360

Query: 361 VNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATSLLRELQEKDLVDGHTYRKLLYVL 420
           VNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATSLLRELQEKDLVDGHTYRKLLYVL
Sbjct: 361 VNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATSLLRELQEKDLVDGHTYRKLLYVL 420

Query: 421 EDDYGNLN 429
           EDDYGNLN
Sbjct: 421 EDDYGNLN 428

[Close]
BLAST of Csa1G086930 vs. TrEMBL
Match: A0A061GUJ4_THECC (Tetratricopeptide repeat-like superfamily protein, putative OS=Theobroma cacao GN=TCM_041079 PE=4 SV=1)

HSP 1 Score: 571.6 bits (1472), Expect = 7.9e-160
Identity = 287/403 (71.22%), Postives = 337/403 (83.62%), Query Frame = 1 

Query: 32  FRRFSIHSWWLNNTHHYNLPH--FLRVSQIHPYS--GPNLSFTNFLLK----FYSRAAPS 91
           F  +S+ S +LN       P    L ++QI P S   P  +   F       FYS  APS
Sbjct: 28  FPYYSVFSSYLNPFIKDFKPKESLLGLTQIDPLSVISPTANLHPFCYNSFTCFYSTRAPS 87

Query: 92  RSFRKRANKRLKSSLKPKLDETQFQLAVSKIPPRFTSEELCNVISLQRDPLVCFELFNWA 151
           RSFR+R NKRLK+S KP LD+ +F+ AVS++ PRFT+EELCNVI+L+ DPLVC+ELFNWA
Sbjct: 88  RSFRRRINKRLKASSKPVLDQPKFEKAVSQLLPRFTAEELCNVITLEEDPLVCWELFNWA 147

Query: 152 SQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYFFTEARK 211
            QQPRFRHD S+Y ITIKKLG AKMYEEMD VVNQ LA+ + GSE LYNT+IYFFTEARK
Sbjct: 148 VQQPRFRHDVSTYHITIKKLGVAKMYEEMDVVVNQVLALRTFGSEPLYNTIIYFFTEARK 207

Query: 212 LTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNTYINHMYMETIRCLFRQMVND 271
           LTRAVNIFKHM+NNR L+CRPSIRTYN+LFTA LSRGR++YINHMYMETIRCLFRQMVN 
Sbjct: 208 LTRAVNIFKHMRNNRKLDCRPSIRTYNILFTAMLSRGRDSYINHMYMETIRCLFRQMVN- 267

Query: 272 DGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLCAQARTD 331
           DGIEPD+FSLN MIKGYVLSLHVNDALR+FHQMGVVY CLPNSYS+D+LI+GLCAQ RT+
Sbjct: 268 DGIEPDVFSLNSMIKGYVLSLHVNDALRVFHQMGVVYKCLPNSYSYDFLIYGLCAQGRTN 327

Query: 332 NAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDFITYKTVL 391
           NA+ELCNEMK+ GFVPSS SYNS+VNALAL+GEVE+A++YL EMI+ R+S DFITY+T+L
Sbjct: 328 NARELCNEMKKNGFVPSSKSYNSLVNALALSGEVEEALHYLREMIEKRKSADFITYRTIL 387

Query: 392 DELCRQGKVVEATSLLRELQEKDLVDGHTYRKLLYVLEDDYGN 427
           DE+CR+G+  EAT LL+ELQ+KDLVDGHTYRKLLY +EDD+GN
Sbjct: 388 DEICRRGRAEEATGLLKELQDKDLVDGHTYRKLLYAMEDDFGN 429

[Close]
BLAST of Csa1G086930 vs. TrEMBL
Match: A0A0D2RRL4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G012900 PE=4 SV=1)

HSP 1 Score: 554.7 bits (1428), Expect = 1.0e-154
Identity = 277/415 (66.75%), Postives = 333/415 (80.24%), Query Frame = 1 

Query: 14  NSIDHLFNSNPSYPHFVCFRRFSIHSWWLNNTHHYNLPHFLRVSQIHPYS--GPNLSFTN 73
           N + +LF+  P + +F  +  FS +     N  H         +QI+P S   P      
Sbjct: 11  NCLINLFHRCP-FHYFPFYSVFSCNLGTFKNPQHSPFTF----TQINPSSITSPTSISHQ 70

Query: 74  FLLKFYSRAAPSRSFRKRANKRLKSSLKPKLDETQFQLAVSKIPPRFTSEELCNVISLQR 133
           F   FYS  APSRS+R+R NKRLK+S KP LD+ +FQ  +S++PPRFT++EL NVI+L+ 
Sbjct: 71  FYTYFYSTKAPSRSYRRRVNKRLKASQKPVLDQAKFQQVISQLPPRFTADELYNVITLED 130

Query: 134 DPLVCFELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLY 193
           DPLVC+ELFNWA+QQPRF+H+ S+Y ITIKKLG AKMYEEMD VVNQ LA+ S GSE LY
Sbjct: 131 DPLVCWELFNWAAQQPRFKHNVSTYHITIKKLGVAKMYEEMDVVVNQVLALRSFGSEPLY 190

Query: 194 NTMIYFFTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNTYINHMYME 253
           NTMIYFF EARKLTRAVNIFKHM+NNR  +CRPSIRTYN+LFTA LSRG+++YINHMYME
Sbjct: 191 NTMIYFFAEARKLTRAVNIFKHMRNNRKFDCRPSIRTYNILFTAMLSRGKDSYINHMYME 250

Query: 254 TIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFDY 313
           TIRCLFRQMV DDGIEPD+F+LN MIKGYVLSLHVNDALR+FHQMGVVY CLPN++S+DY
Sbjct: 251 TIRCLFRQMV-DDGIEPDVFTLNSMIKGYVLSLHVNDALRVFHQMGVVYKCLPNAFSYDY 310

Query: 314 LIHGLCAQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDAVNYLWEMIDNR 373
           LI+GLCAQ RT+NA+ELC+EMK  GF PS  SYNS+VNALA+ GEVE+AV+YL EMI+ R
Sbjct: 311 LIYGLCAQGRTNNARELCDEMKRNGFTPSGKSYNSLVNALAIAGEVEEAVHYLREMIEMR 370

Query: 374 RSPDFITYKTVLDELCRQGKVVEATSLLRELQEKDLVDGHTYRKLLYVLEDDYGN 427
           +S D ITY+T+LDE+CR+G+V EA  LLRELQ KDLVDGHTYRKLLY +ED YG+
Sbjct: 371 KSADLITYRTILDEICRRGRVEEAMGLLRELQSKDLVDGHTYRKLLYAMEDSYGD 419

[Close]
BLAST of Csa1G086930 vs. TrEMBL
Match: A0A0B2P955_GLYSO (Pentatricopeptide repeat-containing protein, mitochondrial OS=Glycine soja GN=glysoja_024687 PE=4 SV=1)

HSP 1 Score: 549.7 bits (1415), Expect = 3.2e-153
Identity = 271/369 (73.44%), Postives = 311/369 (84.28%), Query Frame = 1 

Query: 66  NLSFTNFLLKF------YSRAAPSRSFRKRANKRLKSSLKPKLDETQFQLAVSKIPPRFT 125
           N S+T F + F      YS  APSRS+++RA KRL  S KP LD+ QFQLA+S++PPRFT
Sbjct: 70  NTSYTQFPIPFAPFNSHYSTKAPSRSYQRRARKRLLKSSKPTLDQAQFQLALSQLPPRFT 129

Query: 126 SEELCNVISLQRDPLVCFELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQA 185
            EELCNVI+ Q DPLVC ELF+WASQQPRFRHD S++ ITIKKLG AKMY+EMD +VNQ 
Sbjct: 130 PEELCNVIARQNDPLVCLELFHWASQQPRFRHDVSTFHITIKKLGAAKMYQEMDDIVNQL 189

Query: 186 LAVSSIGSETLYNTMIYFFTEARKLTRAVNIFKHMQNNRNLNC--RPSIRTYNLLFTAFL 245
           LAV  IGSE L+N +IY+FT+ARKLTRAVN+FKHM++ RNLNC  RPSIRTYN+LF AFL
Sbjct: 190 LAVPLIGSEALFNMVIYYFTQARKLTRAVNVFKHMKSRRNLNCFFRPSIRTYNILFAAFL 249

Query: 246 SRGRNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMG 305
            RG N+YINH+YMETIRCLFRQMV D GI+PDIFSLN MIKGYVLSLHVNDALRIFHQMG
Sbjct: 250 GRGSNSYINHVYMETIRCLFRQMVKD-GIKPDIFSLNSMIKGYVLSLHVNDALRIFHQMG 309

Query: 306 VVYSCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEV 365
           V+Y C PN+ ++D LIHGLCAQ RT+NAKEL +EMK KGFVPSS SYNS+VN+LAL GE+
Sbjct: 310 VIYDCPPNALTYDCLIHGLCAQGRTNNAKELYSEMKTKGFVPSSKSYNSLVNSLALGGEI 369

Query: 366 EDAVNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATSLLRELQEKDLVDGHTYRKLL 425
           E+AVNYLWEM D +RS DFITYKTVLDE+CR+G V E T  L+ELQEKDLVDGH YRKLL
Sbjct: 370 EEAVNYLWEMTDKQRSADFITYKTVLDEICRRGTVQEGTRFLQELQEKDLVDGHAYRKLL 429

Query: 426 YVLEDDYGN 427
           YVLEDDYGN
Sbjct: 430 YVLEDDYGN 437

[Close]
BLAST of Csa1G086930 vs. TrEMBL
Match: K7LTG7_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 549.7 bits (1415), Expect = 3.2e-153
Identity = 271/369 (73.44%), Postives = 311/369 (84.28%), Query Frame = 1 

Query: 66  NLSFTNFLLKF------YSRAAPSRSFRKRANKRLKSSLKPKLDETQFQLAVSKIPPRFT 125
           N S+T F + F      YS  APSRS+++RA KRL  S KP LD+ QFQLA+S++PPRFT
Sbjct: 70  NTSYTQFPIPFAPFNSHYSTKAPSRSYQRRARKRLLKSSKPTLDQAQFQLALSQLPPRFT 129

Query: 126 SEELCNVISLQRDPLVCFELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQA 185
            EELCNVI+ Q DPLVC ELF+WASQQPRFRHD S++ ITIKKLG AKMY+EMD +VNQ 
Sbjct: 130 PEELCNVIARQNDPLVCLELFHWASQQPRFRHDVSTFHITIKKLGAAKMYQEMDDIVNQL 189

Query: 186 LAVSSIGSETLYNTMIYFFTEARKLTRAVNIFKHMQNNRNLNC--RPSIRTYNLLFTAFL 245
           LAV  IGSE L+N +IY+FT+ARKLTRAVN+FKHM++ RNLNC  RPSIRTYN+LF AFL
Sbjct: 190 LAVPLIGSEALFNMVIYYFTQARKLTRAVNVFKHMKSRRNLNCFFRPSIRTYNILFAAFL 249

Query: 246 SRGRNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMG 305
            RG N+YINH+YMETIRCLFRQMV D GI+PDIFSLN MIKGYVLSLHVNDALRIFHQMG
Sbjct: 250 GRGSNSYINHVYMETIRCLFRQMVKD-GIKPDIFSLNSMIKGYVLSLHVNDALRIFHQMG 309

Query: 306 VVYSCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEV 365
           V+Y C PN+ ++D LIHGLCAQ RT+NAKEL +EMK KGFVPSS SYNS+VN+LAL GE+
Sbjct: 310 VIYDCPPNALTYDCLIHGLCAQGRTNNAKELYSEMKTKGFVPSSKSYNSLVNSLALGGEI 369

Query: 366 EDAVNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATSLLRELQEKDLVDGHTYRKLL 425
           E+AVNYLWEM D +RS DFITYKTVLDE+CR+G V E T  L+ELQEKDLVDGH YRKLL
Sbjct: 370 EEAVNYLWEMTDKQRSADFITYKTVLDEICRRGTVQEGTRFLQELQEKDLVDGHAYRKLL 429

Query: 426 YVLEDDYGN 427
           YVLEDDYGN
Sbjct: 430 YVLEDDYGN 437

[Close]
BLAST of Csa1G086930 vs. TAIR10
Match: AT2G27800.1 (AT2G27800.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 465.7 bits (1197), Expect = 3.1e-131
Identity = 222/347 (63.98%), Postives = 278/347 (80.12%), Query Frame = 1 

Query: 77  YSRAAPSRSFRKRANKRLKSSLKPKLDETQFQLAVSKIPPRFTSEELCNVISLQRDPLVC 136
           YS + P+RS R+R + R KSS KP L+ ++F   +SK+PPRFT EEL + I+L+ DP +C
Sbjct: 96  YSTSVPTRSLRRRISNRKKSSAKPILNVSKFHETISKLPPRFTPEELADAITLEEDPFLC 155

Query: 137 FELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIY 196
           F LFNWASQQPRF H++ SY I I+KLG AKMY+EMD +VNQ L+V  IG+E LYN++I+
Sbjct: 156 FHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIF 215

Query: 197 FFTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNTYINHMYMETIRCL 256
           +FT+A KL RAVNIF+HM  ++NL CRP+IRTY++LF A L RG N+YINH+YMET+R L
Sbjct: 216 YFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSL 275

Query: 257 FRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGL 316
           FRQMV D GIEPD+F+LNC++KGYVLSLHVNDALRIFHQM VVY C PNS+++DYLIHGL
Sbjct: 276 FRQMV-DSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGL 335

Query: 317 CAQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDF 376
           CAQ RT NA+EL +EMK KGFVP+  SYNS+VNA AL+GE++DAV  LWEMI+N R  DF
Sbjct: 336 CAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDF 395

Query: 377 ITYKTVLDELCRQGKVVEATSLLRELQEKDLVDGHTYRKLLYVLEDD 424
           I+Y+T++DE CR+GK  EAT LL  L+EK LVD  +Y KL+ VL  D
Sbjct: 396 ISYRTLVDESCRKGKYDEATRLLEMLREKQLVDRDSYDKLVNVLHKD 441

[Close]
BLAST of Csa1G086930 vs. TAIR10
Match: AT5G27300.1 (AT5G27300.1 pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 229.9 bits (585), Expect = 2.9e-60
Identity = 126/299 (42.14%), Postives = 178/299 (59.53%), Query Frame = 1 

Query: 77  YSRAAPSRSFRKRANKRLKSSLKPKLDETQFQLAVSKIPPRFTSEELCNVISLQRDPLVC 136
           YS + P+RS R+R + R KSS KP L+E++FQ  +SK+PPRFT EEL + I+L+ DP +C
Sbjct: 89  YSTSVPTRSLRRRISSRKKSSTKPILNESKFQETISKLPPRFTPEELADAITLEEDPFLC 148

Query: 137 FELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIY 196
           F LFNWASQQPRF H++ SY                       +A+  +G+         
Sbjct: 149 FHLFNWASQQPRFTHENCSYH----------------------IAIRKLGA--------- 208

Query: 197 FFTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNTYINHMYMETIRCL 256
              ++ KL RAVNIF+HM N+RNL CRP++RTY++LF A L RG N++INH+YMET+R L
Sbjct: 209 --AKSGKLIRAVNIFRHMVNSRNLECRPTMRTYHILFKALLGRGNNSFINHLYMETVRSL 268

Query: 257 FRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGL 316
           FRQMV D GIEPD+F+LNC++KG   +++  + L      G V    PN  S++ L++  
Sbjct: 269 FRQMV-DSGIEPDVFALNCLVKG--RTINTRELLSEMKGKGFV----PNGKSYNSLVNAF 328

Query: 317 CAQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPD 376
                 D+A +   EM E G V   ISY ++V+     G+ ++A   L EM+  ++  D
Sbjct: 329 ALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLL-EMLREKQLVD 346


HSP 2 Score: 227.3 bits (578), Expect = 1.9e-59
Identity = 134/333 (40.24%), Postives = 183/333 (54.95%), Query Frame = 1 

Query: 77  YSRAAPSRSFRKRANKRLKSSLKPKLDETQFQLAVSKIPPRFTSEELCNVISLQRDPLVC 136
           YS + P+RS R+R + R KSS KP L+E++FQ  +SK+PPRFT EEL + I+L+ DP +C
Sbjct: 89  YSTSVPTRSLRRRISSRKKSSTKPILNESKFQETISKLPPRFTPEELADAITLEEDPFLC 148

Query: 137 FELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIY 196
           F LFNWASQQPRF H++ SY                       +A+  +G+         
Sbjct: 149 FHLFNWASQQPRFTHENCSYH----------------------IAIRKLGA--------- 208

Query: 197 FFTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNTYINHMYMETIRCL 256
              ++ KL RAVNIF+HM N+RNL CRP+                        M T   L
Sbjct: 209 --AKSGKLIRAVNIFRHMVNSRNLECRPT------------------------MRTYHIL 268

Query: 257 FRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGL 316
           F+ ++                  ++  L++     +F QM V     P+ ++ + L+ G 
Sbjct: 269 FKALLGRGN------------NSFINHLYMETVRSLFRQM-VDSGIEPDVFALNCLVKG- 328

Query: 317 CAQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDF 376
               RT N +EL +EMK KGFVP+  SYNS+VNA AL+GE++DAV  LWEMI+N R  DF
Sbjct: 329 ----RTINTRELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDF 346

Query: 377 ITYKTVLDELCRQGKVVEATSLLRELQEKDLVD 410
           I+Y+T++DE CR+GK  EAT LL  L+EK LVD
Sbjct: 389 ISYRTLVDESCRKGKYDEATRLLEMLREKQLVD 346

[Close]
BLAST of Csa1G086930 vs. TAIR10
Match: AT1G05670.1 (AT1G05670.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 110.5 bits (275), Expect = 2.5e-24
Identity = 73/248 (29.44%), Postives = 119/248 (47.98%), Query Frame = 1 

Query: 160 IKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYFFTEARKLTRAVNIFKHMQNNRN 219
           I KL EA+  E    ++ Q +   ++    +Y T+I  F +   +  A   F  M +   
Sbjct: 329 ICKLAEAE--EAFSEMIRQGILPDTV----VYTTLIDGFCKRGDIRAASKFFYEMHSR-- 388

Query: 220 LNCRPSIRTYNLLFTAFLSRGRNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKG 279
            +  P + TY  + + F   G       ++ E   C         G+EPD  +   +I G
Sbjct: 389 -DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF-C--------KGLEPDSVTFTELING 448

Query: 280 YVLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGFVP 339
           Y  + H+ DA R+ + M +   C PN  ++  LI GLC +   D+A EL +EM + G  P
Sbjct: 449 YCKAGHMKDAFRVHNHM-IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 508

Query: 340 SSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATSLL 399
           +  +YNSIVN L  +G +E+AV  + E      + D +TY T++D  C+ G++ +A  +L
Sbjct: 509 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 557

Query: 400 RELQEKDL 408
           +E+  K L
Sbjct: 569 KEMLGKGL 557


HSP 2 Score: 74.3 bits (181), Expect = 2.0e-13
Identity = 46/194 (23.71%), Postives = 91/194 (46.91%), Query Frame = 1 

Query: 225 SIRTYNLLFTAFLSRGRNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSL 284
           ++ +YN++       GR    +H+ +         ++   G  PD+ S + ++ GY    
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLL---------LMELKGYTPDVISYSTVVNGYCRFG 304

Query: 285 HVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGFVPSSISY 344
            ++   ++   M       PNSY +  +I  LC   +   A+E  +EM  +G +P ++ Y
Sbjct: 305 ELDKVWKLIEVMKRK-GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVY 364

Query: 345 NSIVNALALNGEVEDAVNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATSLLRELQE 404
            ++++     G++  A  + +EM     +PD +TY  ++   C+ G +VEA  L  E+  
Sbjct: 365 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 424

Query: 405 KDL-VDGHTYRKLL 418
           K L  D  T+ +L+
Sbjct: 425 KGLEPDSVTFTELI 428


HSP 3 Score: 40.0 bits (92), Expect = 4.2e-03
Identity = 24/87 (27.59%), Postives = 43/87 (49.43%), Query Frame = 1 

Query: 321 RTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDFITYK 380
           +T  A  +  E  E G   +  SYN +++ +   G +++A + L  M     +PD I+Y 
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 285

Query: 381 TVLDELCRQGKVVEATSLLRELQEKDL 408
           TV++  CR G++ +   L+  ++ K L
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGL 312

[Close]
BLAST of Csa1G086930 vs. TAIR10
Match: AT1G30290.1 (AT1G30290.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 109.4 bits (272), Expect = 5.6e-24
Identity = 79/313 (25.24%), Postives = 145/313 (46.33%), Query Frame = 1 

Query: 94  LKSSLKPKLDETQFQLAVSKIPPRFTSEELCNVISLQRDPLVCFELFNWASQQPRFRHDD 153
           L+SS  PK  E Q +  +  + P     ++C V+  Q D  V  + F WA +Q R+RHD 
Sbjct: 153 LRSSWNPK-HEGQMRNLLRSLKP----SQVCAVLRSQDDERVALKFFYWADRQWRYRHDP 212

Query: 154 SSYEITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYFFTEARKLTRAVNIFKH 213
             Y   ++ L + K+ +    V+          +   ++ ++  ++ A +L  A+ +   
Sbjct: 213 MVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTL 272

Query: 214 MQNNRNLNCRPSIRTYNLLFTAFLSRGRNTYINHMYMETIRCLFRQMVNDDGIEPDIFSL 273
           MQ        P++   N     F+   R         + +R L R  V   GI P++ + 
Sbjct: 273 MQ---RAGVEPNLLICNTTIDVFVRANR-------LEKALRFLERMQV--VGIVPNVVTY 332

Query: 274 NCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLCAQARTDNAKELCNEM- 333
           NCMI+GY     V +A+ +   M     CLP+  S+  ++  LC + R    ++L  +M 
Sbjct: 333 NCMIRGYCDLHRVEEAIELLEDMH-SKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMA 392

Query: 334 KEKGFVPSSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDFITYKTVLDELCRQGKV 393
           KE G VP  ++YN++++ L  +   ++A+ +L +  +     D + Y  ++  LC++G++
Sbjct: 393 KEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRM 447

Query: 394 VEATSLLRELQEK 406
            EA  L+ E+  K
Sbjct: 453 SEAKDLINEMLSK 447


HSP 2 Score: 78.2 bits (191), Expect = 1.4e-14
Identity = 56/241 (23.24%), Postives = 104/241 (43.15%), Query Frame = 1 

Query: 165 EAKMYEEMDHVVNQALAVSSIGSETLYNTMIYFFTEARKLTRAVNIFKHMQNNRNLNCRP 224
           E ++ E  D +   A     +  +  YNT+I+  T+      A+   K  Q       R 
Sbjct: 360 EKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEK---GFRI 419

Query: 225 SIRTYNLLFTAFLSRGRNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSL 284
               Y+ +  A    GR        M   + L  +M++     PD+ +   ++ G+    
Sbjct: 420 DKLGYSAIVHALCKEGR--------MSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLG 479

Query: 285 HVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGFVPSSISY 344
            V+ A ++   M   +   PN+ S+  L++G+C   ++  A+E+ N  +E  + P+SI+Y
Sbjct: 480 EVDKAKKLLQVMHT-HGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITY 539

Query: 345 NSIVNALALNGEVEDAVNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATSLLRELQE 404
           + I++ L   G++ +A + + EM+     P  +    +L  LCR G+  EA   + E   
Sbjct: 540 SVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLN 588

Query: 405 K 406
           K
Sbjct: 600 K 588


HSP 3 Score: 73.2 bits (178), Expect = 4.5e-13
Identity = 54/277 (19.49%), Postives = 120/277 (43.32%), Query Frame = 1 

Query: 144 SQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQALAVSSIGSETL-YNTMIYFFTEAR 203
           +Q+  FR D   Y   +  L +     E   ++N+ L+      + + Y  ++  F    
Sbjct: 409 AQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLG 468

Query: 204 KLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNTYINHMYMETIRCLFRQMVN 263
           ++ +A  + + M  + +   +P+  +Y  L       G++     M           M  
Sbjct: 469 EVDKAKKLLQVMHTHGH---KPNTVSYTALLNGMCRTGKSLEAREMM---------NMSE 528

Query: 264 DDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLCAQART 323
           +    P+  + + ++ G      +++A  +  +M V+    P     + L+  LC   RT
Sbjct: 529 EHWWSPNSITYSVIMHGLRREGKLSEACDVVREM-VLKGFFPGPVEINLLLQSLCRDGRT 588

Query: 324 DNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDFITYKTV 383
             A++   E   KG   + +++ ++++    N E++ A++ L +M    +  D  TY T+
Sbjct: 589 HEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTL 648

Query: 384 LDELCRQGKVVEATSLLRELQEKDL-VDGHTYRKLLY 419
           +D L ++G++ EAT L++++  K +     TYR +++
Sbjct: 649 VDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIH 672


HSP 4 Score: 68.2 bits (165), Expect = 1.4e-11
Identity = 53/263 (20.15%), Postives = 109/263 (41.44%), Query Frame = 1 

Query: 155 SYEITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYFFTEARKLTRAVNIFKHM 214
           +Y   I+   +    EE   ++    +   +  +  Y T++ +  + +++    ++ K M
Sbjct: 314 TYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKM 373

Query: 215 QNNRNLNCRPSIRTYNLLFTAFLSRGRNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLN 274
                L   P   TYN L         +    H + +     F +   + G   D    +
Sbjct: 374 AKEHGLV--PDQVTYNTLI--------HMLTKHDHADEA-LWFLKDAQEKGFRIDKLGYS 433

Query: 275 CMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKE 334
            ++        +++A  + ++M     C P+  ++  +++G C     D AK+L   M  
Sbjct: 434 AIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHT 493

Query: 335 KGFVPSSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVE 394
            G  P+++SY +++N +   G+  +A   +    ++  SP+ ITY  ++  L R+GK+ E
Sbjct: 494 HGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSE 553

Query: 395 ATSLLRELQEKDLVDGHTYRKLL 418
           A  ++RE+  K    G     LL
Sbjct: 554 ACDVVREMVLKGFFPGPVEINLL 565


HSP 5 Score: 57.0 bits (136), Expect = 3.3e-08
Identity = 50/209 (23.92%), Postives = 95/209 (45.45%), Query Frame = 1 

Query: 191 YNTMIYFFTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNTYINHMYM 250
           Y+ +++      KL+ A ++ + M         P     NLL  +    GR T+    +M
Sbjct: 527 YSVIMHGLRREGKLSEACDVVREMVLKGFF---PGPVEINLLLQSLCRDGR-THEARKFM 586

Query: 251 ETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFD 310
           E   CL      + G   ++ +   +I G+  +  ++ AL +   M ++     + +++ 
Sbjct: 587 E--ECL------NKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHA-DVFTYT 646

Query: 311 YLIHGLCAQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDAVNYLWEMIDN 370
            L+  L  + R   A EL  +M  KG  P+ ++Y ++++     G+V+D V  L +MI  
Sbjct: 647 TLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR 706

Query: 371 RRSPDFITYKTVLDELCRQGKVVEATSLL 400
           ++      Y  V+++LC  GK+ EA +LL
Sbjct: 707 QKCRTI--YNQVIEKLCVLGKLEEADTLL 720

[Close]
BLAST of Csa1G086930 vs. TAIR10
Match: AT1G09900.1 (AT1G09900.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 109.0 bits (271), Expect = 7.4e-24
Identity = 68/228 (29.82%), Postives = 111/228 (48.68%), Query Frame = 1 

Query: 191 YNTMIYFFTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNTYINHMYM 250
           YN ++    +  +L  A+     M ++    C+P++ T+N++  +  S GR      +  
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSS---GCQPNVITHNIILRSMCSTGRWMDAEKLLA 336

Query: 251 ETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFD 310
           + +R          G  P + + N +I        +  A+ I  +M   + C PNS S++
Sbjct: 337 DMLR---------KGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQ-HGCQPNSLSYN 396

Query: 311 YLIHGLCAQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDAVNYLWEMIDN 370
            L+HG C + + D A E    M  +G  P  ++YN+++ AL  +G+VEDAV  L ++   
Sbjct: 397 PLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 456

Query: 371 RRSPDFITYKTVLDELCRQGKVVEATSLLRELQEKDL-VDGHTYRKLL 418
             SP  ITY TV+D L + GK  +A  LL E++ KDL  D  TY  L+
Sbjct: 457 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491


HSP 2 Score: 86.7 bits (213), Expect = 3.9e-17
Identity = 60/254 (23.62%), Postives = 114/254 (44.88%), Query Frame = 1 

Query: 152 DDSSYEITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYFFTEARKLTRAVNIF 211
           D  +Y   ++ L ++   ++   V+++ L          Y  +I        +  A+ + 
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLL 262

Query: 212 KHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNTYINHMYMETIRCLFRQMVNDDGIEPDIF 271
             M   R+  C P + TYN+L       GR         E I+  F   +   G +P++ 
Sbjct: 263 DEM---RDRGCTPDVVTYNVLVNGICKEGRLD-------EAIK--FLNDMPSSGCQPNVI 322

Query: 272 SLNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLCAQARTDNAKELCNE 331
           + N +++    +    DA ++   M +     P+  +F+ LI+ LC +     A ++  +
Sbjct: 323 THNIILRSMCSTGRWMDAEKLLADM-LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEK 382

Query: 332 MKEKGFVPSSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDFITYKTVLDELCRQGK 391
           M + G  P+S+SYN +++      +++ A+ YL  M+     PD +TY T+L  LC+ GK
Sbjct: 383 MPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 442

Query: 392 VVEATSLLRELQEK 406
           V +A  +L +L  K
Sbjct: 443 VEDAVEILNQLSSK 443


HSP 3 Score: 80.9 bits (198), Expect = 2.1e-15
Identity = 49/180 (27.22%), Postives = 87/180 (48.33%), Query Frame = 1 

Query: 224 PSIRTYNLLFTAFLSRGRNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLS 283
           PS+ T+N+L      +G       +    I  L  + +   G +P+  S N ++ G+   
Sbjct: 342 PSVVTFNILINFLCRKG-------LLGRAIDIL--EKMPQHGCQPNSLSYNPLLHGFCKE 401

Query: 284 LHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGFVPSSIS 343
             ++ A+    +M V   C P+  +++ ++  LC   + ++A E+ N++  KG  P  I+
Sbjct: 402 KKMDRAIEYLERM-VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 461

Query: 344 YNSIVNALALNGEVEDAVNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATSLLRELQ 403
           YN++++ LA  G+   A+  L EM      PD ITY +++  L R+GKV EA     E +
Sbjct: 462 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE 511


HSP 4 Score: 80.1 bits (196), Expect = 3.7e-15
Identity = 58/245 (23.67%), Postives = 110/245 (44.90%), Query Frame = 1 

Query: 155 SYEITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYFFTEARKLTRAVNIFKHM 214
           ++ I ++ +     + + + ++   L      S   +N +I F      L RA++I + M
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370

Query: 215 QNNRNLNCRPSIRTYNLLFTAFLSRGRNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLN 274
             +    C+P+  +YN L   F    +        M+       +MV+  G  PDI + N
Sbjct: 371 PQH---GCQPNSLSYNPLLHGFCKEKK--------MDRAIEYLERMVSR-GCYPDIVTYN 430

Query: 275 CMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKE 334
            M+        V DA+ I +Q+     C P   +++ +I GL    +T  A +L +EM+ 
Sbjct: 431 TMLTALCKDGKVEDAVEILNQLSSK-GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA 490

Query: 335 KGFVPSSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVE 394
           K   P +I+Y+S+V  L+  G+V++A+ +  E       P+ +T+ +++  LC+  +   
Sbjct: 491 KDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDR 542

Query: 395 ATSLL 400
           A   L
Sbjct: 551 AIDFL 542


HSP 5 Score: 77.4 bits (189), Expect = 2.4e-14
Identity = 38/144 (26.39%), Postives = 74/144 (51.39%), Query Frame = 1 

Query: 259 QMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLCA 318
           +++   G  PD+ + N MI GY  +  +N+AL +  +M V     P+  +++ ++  LC 
Sbjct: 161 EILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS----PDVVTYNTILRSLCD 220

Query: 319 QARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDFIT 378
             +   A E+ + M ++   P  I+Y  ++ A   +  V  A+  L EM D   +PD +T
Sbjct: 221 SGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVT 280

Query: 379 YKTVLDELCRQGKVVEATSLLREL 403
           Y  +++ +C++G++ EA   L ++
Sbjct: 281 YNVLVNGICKEGRLDEAIKFLNDM 300


HSP 6 Score: 61.2 bits (147), Expect = 1.8e-09
Identity = 39/129 (30.23%), Postives = 63/129 (48.84%), Query Frame = 1 

Query: 298 VVYSCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEV 357
           V +  +P+      LI G C   +T  A ++   ++  G VP  I+YN +++     GE+
Sbjct: 129 VYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEI 188

Query: 358 EDAVNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATSLLRELQEKDLV-DGHTYRKL 417
            +A++ L  M     SPD +TY T+L  LC  GK+ +A  +L  + ++D   D  TY  L
Sbjct: 189 NNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTIL 248

Query: 418 LYVLEDDYG 426
           +     D G
Sbjct: 249 IEATCRDSG 254


HSP 7 Score: 48.9 bits (115), Expect = 9.0e-06
Identity = 47/190 (24.74%), Postives = 74/190 (38.95%), Query Frame = 1 

Query: 152 DDSSYEITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYFFTEARKLTRAVNIF 211
           D  +Y   +  L +    E+   ++NQ  +         YNT+I    +A K  +A+ + 
Sbjct: 413 DIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLL 472

Query: 212 KHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNTYINHMYMETIRCLFRQMVNDDGIEPDIF 271
             M   R  + +P   TY+ L       G+       + E     F +M    GI P+  
Sbjct: 473 DEM---RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE-----FERM----GIRPNAV 532

Query: 272 SLNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLCAQARTDNAKELCNE 331
           + N ++ G   S   + A+     M +   C PN  S+  LI GL  +     A EL NE
Sbjct: 533 TFNSIMLGLCKSRQTDRAIDFLVFM-INRGCKPNETSYTILIEGLAYEGMAKEALELLNE 589

Query: 332 MKEKGFVPSS 342
           +  KG +  S
Sbjct: 593 LCNKGLMKKS 589

[Close]
BLAST of Csa1G086930 vs. NCBI nr
Match: gi|449459126|ref|XP_004147297.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 879.0 bits (2270), Expect = 3.3e-252
Identity = 428/428 (100.00%), Postives = 428/428 (100.00%), Query Frame = 1 

Query: 1   MNLLLRIRIHFSTNSIDHLFNSNPSYPHFVCFRRFSIHSWWLNNTHHYNLPHFLRVSQIH 60
           MNLLLRIRIHFSTNSIDHLFNSNPSYPHFVCFRRFSIHSWWLNNTHHYNLPHFLRVSQIH
Sbjct: 1   MNLLLRIRIHFSTNSIDHLFNSNPSYPHFVCFRRFSIHSWWLNNTHHYNLPHFLRVSQIH 60

Query: 61  PYSGPNLSFTNFLLKFYSRAAPSRSFRKRANKRLKSSLKPKLDETQFQLAVSKIPPRFTS 120
           PYSGPNLSFTNFLLKFYSRAAPSRSFRKRANKRLKSSLKPKLDETQFQLAVSKIPPRFTS
Sbjct: 61  PYSGPNLSFTNFLLKFYSRAAPSRSFRKRANKRLKSSLKPKLDETQFQLAVSKIPPRFTS 120

Query: 121 EELCNVISLQRDPLVCFELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQAL 180
           EELCNVISLQRDPLVCFELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQAL
Sbjct: 121 EELCNVISLQRDPLVCFELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQAL 180

Query: 181 AVSSIGSETLYNTMIYFFTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240
           AVSSIGSETLYNTMIYFFTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG
Sbjct: 181 AVSSIGSETLYNTMIYFFTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240

Query: 241 RNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVY 300
           RNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVY
Sbjct: 241 RNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVY 300

Query: 301 SCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDA 360
           SCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDA
Sbjct: 301 SCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDA 360

Query: 361 VNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATSLLRELQEKDLVDGHTYRKLLYVL 420
           VNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATSLLRELQEKDLVDGHTYRKLLYVL
Sbjct: 361 VNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATSLLRELQEKDLVDGHTYRKLLYVL 420

Query: 421 EDDYGNLN 429
           EDDYGNLN
Sbjct: 421 EDDYGNLN 428

[Close]
BLAST of Csa1G086930 vs. NCBI nr
Match: gi|659072149|ref|XP_008463631.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucumis melo])

HSP 1 Score: 801.6 bits (2069), Expect = 6.7e-229
Identity = 392/428 (91.59%), Postives = 407/428 (95.09%), Query Frame = 1 

Query: 1   MNLLLRIRIHFSTNSIDHLFNSNPSYPHFVCFRRFSIHSWWLNNTHHYNLPHFLRVSQIH 60
           MN L RIRIHFSTNSI+HLFNSNPSYPHF+CFRRFSIHS  LNNTHH NL HFLRVSQI 
Sbjct: 1   MNPLFRIRIHFSTNSINHLFNSNPSYPHFICFRRFSIHSLSLNNTHHCNLTHFLRVSQIQ 60

Query: 61  PYSGPNLSFTNFLLKFYSRAAPSRSFRKRANKRLKSSLKPKLDETQFQLAVSKIPPRFTS 120
            Y  PNLSFT F L FYS+ APSRSFR+RANKRLK+SLKP LDE QFQLAVSKIPPRFT 
Sbjct: 61  TYPAPNLSFTKFCLNFYSKTAPSRSFRRRANKRLKASLKPTLDEAQFQLAVSKIPPRFTP 120

Query: 121 EELCNVISLQRDPLVCFELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQAL 180
           EEL NVISLQ+DPLVCFELFNWASQQPRF+HD SSYEITIKKLGEAKMYEEMDHVVNQAL
Sbjct: 121 EELRNVISLQKDPLVCFELFNWASQQPRFKHDVSSYEITIKKLGEAKMYEEMDHVVNQAL 180

Query: 181 AVSSIGSETLYNTMIYFFTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240
           AVSSIGSETLYNTMIYFFTEARKLTRA+NIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG
Sbjct: 181 AVSSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240

Query: 241 RNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVY 300
           RNTYINH+YMETIRCLFRQMVNDDGIEPDIF+LNCMIKGYVLSLHVNDALRIFHQMGVVY
Sbjct: 241 RNTYINHVYMETIRCLFRQMVNDDGIEPDIFALNCMIKGYVLSLHVNDALRIFHQMGVVY 300

Query: 301 SCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDA 360
           SCLPNSYS+DYLIHGL AQARTDNA+ELCNEMKEKGFVPSSISYNSIVNA+ALNGEVEDA
Sbjct: 301 SCLPNSYSYDYLIHGLSAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEDA 360

Query: 361 VNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATSLLRELQEKDLVDGHTYRKLLYVL 420
           VNYLWEMID+RRSPDFITYKTVLDELCR G+VVEATSLLRELQEKDLVDGHTYRKLLYVL
Sbjct: 361 VNYLWEMIDHRRSPDFITYKTVLDELCRLGRVVEATSLLRELQEKDLVDGHTYRKLLYVL 420

Query: 421 EDDYGNLN 429
           EDDYGNLN
Sbjct: 421 EDDYGNLN 428

[Close]
BLAST of Csa1G086930 vs. NCBI nr
Match: gi|645217145|ref|XP_008224504.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Prunus mume])

HSP 1 Score: 577.8 bits (1488), Expect = 1.6e-161
Identity = 294/426 (69.01%), Postives = 345/426 (80.99%), Query Frame = 1 

Query: 10  HFSTNSIDHLFNSNPSYPHFVCFRRFSIHSWWLNNTHHYNLP-HFLRVSQIHPYSGPNLS 69
           +FS    +H F+   S P     +R ++ S+  N  +    P  +L  +QI P   P ++
Sbjct: 17  NFSRLCYEHSFHQYLSNP-----QRMAVLSYSSNPIYSTLRPIQYLSQTQIDPV--PKIA 76

Query: 70  FTNFL--------LKFYSRAAPSRSFRKRANKRLKSSLKPKLDETQFQLAVSKIPPRFTS 129
              FL          FYS   PSRSFR+R ++R+KSS K  LDE QFQ A+S++ PRFT 
Sbjct: 77  SNGFLGIYERFLLYNFYSTKPPSRSFRRRESRRVKSS-KSTLDEVQFQRAISQLLPRFTP 136

Query: 130 EELCNVISLQRDPLVCFELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQAL 189
           EELCNVI+ Q DP+VC ELFNWASQQPRF+HD S+Y IT+KK+G AKMYEEMD VVNQ L
Sbjct: 137 EELCNVITQQDDPIVCLELFNWASQQPRFKHDVSTYHITVKKVGVAKMYEEMDDVVNQVL 196

Query: 190 AVSSIGSETLYNTMIYFFTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 249
           A+S IGSE LYN++IYFFTEARKLTRAVNIFKHMQN+RNLNCRPSIRTYN+LFTAFLSRG
Sbjct: 197 AISYIGSEALYNSIIYFFTEARKLTRAVNIFKHMQNSRNLNCRPSIRTYNILFTAFLSRG 256

Query: 250 RNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVY 309
            N+YINHMYMETIRCLFRQMV DDGIEPDI+SLN MIKGYVLSLHVNDALRIFHQMGVVY
Sbjct: 257 SNSYINHMYMETIRCLFRQMV-DDGIEPDIYSLNSMIKGYVLSLHVNDALRIFHQMGVVY 316

Query: 310 SCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDA 369
           +CLPNS+S+DYLIHGLC+Q RT+NAK+LCNEMK KGF+PSS SYNS+VN LALNGEVE+A
Sbjct: 317 NCLPNSFSYDYLIHGLCSQGRTNNAKQLCNEMKSKGFIPSSKSYNSLVNGLALNGEVEEA 376

Query: 370 VNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATSLLRELQEKDLVDGHTYRKLLYVL 427
           V YLWEMI+ +RS +FITY+TVLDE+CRQG+V EA  LL+E QEKDL++GHTYRKLLYVL
Sbjct: 377 VKYLWEMIEKQRSAEFITYRTVLDEICRQGRVGEAMRLLKEFQEKDLLNGHTYRKLLYVL 433

[Close]
BLAST of Csa1G086930 vs. NCBI nr
Match: gi|590585546|ref|XP_007015464.1| (Tetratricopeptide repeat-like superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 571.6 bits (1472), Expect = 1.1e-159
Identity = 287/403 (71.22%), Postives = 337/403 (83.62%), Query Frame = 1 

Query: 32  FRRFSIHSWWLNNTHHYNLPH--FLRVSQIHPYS--GPNLSFTNFLLK----FYSRAAPS 91
           F  +S+ S +LN       P    L ++QI P S   P  +   F       FYS  APS
Sbjct: 28  FPYYSVFSSYLNPFIKDFKPKESLLGLTQIDPLSVISPTANLHPFCYNSFTCFYSTRAPS 87

Query: 92  RSFRKRANKRLKSSLKPKLDETQFQLAVSKIPPRFTSEELCNVISLQRDPLVCFELFNWA 151
           RSFR+R NKRLK+S KP LD+ +F+ AVS++ PRFT+EELCNVI+L+ DPLVC+ELFNWA
Sbjct: 88  RSFRRRINKRLKASSKPVLDQPKFEKAVSQLLPRFTAEELCNVITLEEDPLVCWELFNWA 147

Query: 152 SQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYFFTEARK 211
            QQPRFRHD S+Y ITIKKLG AKMYEEMD VVNQ LA+ + GSE LYNT+IYFFTEARK
Sbjct: 148 VQQPRFRHDVSTYHITIKKLGVAKMYEEMDVVVNQVLALRTFGSEPLYNTIIYFFTEARK 207

Query: 212 LTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNTYINHMYMETIRCLFRQMVND 271
           LTRAVNIFKHM+NNR L+CRPSIRTYN+LFTA LSRGR++YINHMYMETIRCLFRQMVN 
Sbjct: 208 LTRAVNIFKHMRNNRKLDCRPSIRTYNILFTAMLSRGRDSYINHMYMETIRCLFRQMVN- 267

Query: 272 DGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLCAQARTD 331
           DGIEPD+FSLN MIKGYVLSLHVNDALR+FHQMGVVY CLPNSYS+D+LI+GLCAQ RT+
Sbjct: 268 DGIEPDVFSLNSMIKGYVLSLHVNDALRVFHQMGVVYKCLPNSYSYDFLIYGLCAQGRTN 327

Query: 332 NAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDFITYKTVL 391
           NA+ELCNEMK+ GFVPSS SYNS+VNALAL+GEVE+A++YL EMI+ R+S DFITY+T+L
Sbjct: 328 NARELCNEMKKNGFVPSSKSYNSLVNALALSGEVEEALHYLREMIEKRKSADFITYRTIL 387

Query: 392 DELCRQGKVVEATSLLRELQEKDLVDGHTYRKLLYVLEDDYGN 427
           DE+CR+G+  EAT LL+ELQ+KDLVDGHTYRKLLY +EDD+GN
Sbjct: 388 DEICRRGRAEEATGLLKELQDKDLVDGHTYRKLLYAMEDDFGN 429

[Close]
BLAST of Csa1G086930 vs. NCBI nr
Match: gi|802551557|ref|XP_012064863.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Jatropha curcas])

HSP 1 Score: 565.5 bits (1456), Expect = 8.1e-158
Identity = 285/431 (66.13%), Postives = 343/431 (79.58%), Query Frame = 1 

Query: 8   RIHFSTN---SIDHLFNSNPSYPHFVCFRRFSIHSWWLNNT-HHYNLPHFLRVSQIHPYS 67
           +I+F  N   S +   +SN ++P       +S++S    ++ + +   + L  ++I P S
Sbjct: 15  KIYFINNPCFSYNSKGSSNFAFPFLTSLNHYSVNSCLFKSSINSFKFVNILSQNRIGPVS 74

Query: 68  ----GPNLS--FTNFLLKFYSRAAPSRSFRKRANKRLKSSLKPKLDETQFQLAVSKIPPR 127
                  L   F  FL  FYS   PSRS R+R +KRLK+S KP LDET+FQ A++K+PPR
Sbjct: 75  ILPSNAKLQGFFGGFLFSFYSTRVPSRSLRRRQSKRLKASRKPILDETKFQEAIAKLPPR 134

Query: 128 FTSEELCNVISLQRDPLVCFELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVN 187
           F ++ELC V++L+ D LVCFE+FNWASQQ RFRHD S+Y I IKKLG AKMY+EMD VVN
Sbjct: 135 FNNDELCYVLTLEEDTLVCFEIFNWASQQHRFRHDTSTYHIIIKKLGVAKMYQEMDDVVN 194

Query: 188 QALAVSSIGSETLYNTMIYFFTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFL 247
           Q LA+  IG+E LYNT+IYFFTEARKLTRAVNIF HM+N RNL CRPSIRTYN+LFTA L
Sbjct: 195 QVLAIPHIGNEALYNTIIYFFTEARKLTRAVNIFNHMKNGRNLECRPSIRTYNILFTAML 254

Query: 248 SRGRNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMG 307
           SRG+N+YIN++YMETIRCLF+QMVN DGIEPDI+SLN MIKGYVLSLHVNDALRIFHQMG
Sbjct: 255 SRGKNSYINYVYMETIRCLFKQMVN-DGIEPDIYSLNSMIKGYVLSLHVNDALRIFHQMG 314

Query: 308 VVYSCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEV 367
           VVY CLPNS+S+DYLIHGLCAQ RT+NA ELC+EMK KGFVPSS SYNS+VNALAL GEV
Sbjct: 315 VVYQCLPNSFSYDYLIHGLCAQGRTNNALELCDEMKRKGFVPSSKSYNSLVNALALIGEV 374

Query: 368 EDAVNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATSLLRELQEKDLVDGHTYRKLL 427
           E+AVNYLWEMI+ ++ PDFITY+TVLDE+CRQGK+ EA +LL+E +EK  VDG TYRKLL
Sbjct: 375 EEAVNYLWEMIEKQKLPDFITYRTVLDEMCRQGKLGEARNLLKEWEEKHFVDGPTYRKLL 434

Query: 428 YVLEDDYGNLN 429
           YVLEDD+GN N
Sbjct: 435 YVLEDDFGNSN 444

The following BLAST results are available for this feature:
BLAST of Csa1G086930 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP173_ARATH5.5e-13063.98Pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Arabidop... [more]
PP298_ARATH2.4e-2427.34Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidop... [more]
PPR12_ARATH4.5e-2329.44Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... [more]
PPR28_ARATH1.3e-2229.82Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN... [more]
PP158_ARATH1.7e-2225.63Pentatricopeptide repeat-containing protein At2g17140 OS=Arabidopsis thaliana GN... [more]
BLAST of Csa1G086930 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LS50_CUCSA2.3e-252100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G086930 PE=4 SV=1[more]
A0A061GUJ4_THECC7.9e-16071.22Tetratricopeptide repeat-like superfamily protein, putative OS=Theobroma cacao G... [more]
A0A0D2RRL4_GOSRA1.0e-15466.75Uncharacterized protein OS=Gossypium raimondii GN=B456_004G012900 PE=4 SV=1[more]
A0A0B2P955_GLYSO3.2e-15373.44Pentatricopeptide repeat-containing protein, mitochondrial OS=Glycine soja GN=gl... [more]
K7LTG7_SOYBN3.2e-15373.44Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
BLAST of Csa1G086930 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G27800.13.1e-13163.98 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G27300.12.9e-6042.14 pentatricopeptide (PPR) repeat-containing protein[more]
AT1G05670.12.5e-2429.44 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT1G30290.15.6e-2425.24 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G09900.17.4e-2429.82 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
BLAST of Csa1G086930 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449459126|ref|XP_004147297.1|3.3e-252100.00PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-... [more]
gi|659072149|ref|XP_008463631.1|6.7e-22991.59PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-... [more]
gi|645217145|ref|XP_008224504.1|1.6e-16169.01PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-... [more]
gi|590585546|ref|XP_007015464.1|1.1e-15971.22Tetratricopeptide repeat-like superfamily protein, putative [Theobroma cacao][more]
gi|802551557|ref|XP_012064863.1|8.1e-15866.13PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G086930.1Csa1G086930.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 272..296
score: 0
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 373..401
score: 9.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 304..352
score: 1.7
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 191..236
score: 1.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 342..375
score: 2.6E-4coord: 272..305
score: 3.3E-4coord: 307..340
score: 1.6E-6coord: 377..407
score: 2.4E-4coord: 190..217
score: 0.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 305..339
score: 11.433coord: 375..409
score: 9.756coord: 269..299
score: 7.092coord: 187..217
score: 7.761coord: 340..374
score: 9
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 55..423
score: 8.0E
NoneNo IPR availablePANTHERPTHR24015:SF658SUBFAMILY NOT NAMEDcoord: 55..423
score: 8.0E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G086930Cla005049Watermelon (97103) v1cuwmB010
Csa1G086930MELO3C005032Melon (DHL92) v3.5.1cumeB015
Csa1G086930ClCG03G002330Watermelon (Charleston Gray)cuwcgB037
Csa1G086930Lsi02G014380Bottle gourd (USVL1VR-Ls)culsiB024
Csa1G086930MELO3C005032.2Melon (DHL92) v3.6.1cumedB010
Csa1G086930Cla97C03G053350Watermelon (97103) v2cuwmbB034
Csa1G086930Bhi08G000288Wax gourdcuwgoB037
Csa1G086930CSPI01G12820Wild cucumber (PI 183967)cpicuB000
Csa1G086930Cucsa.207330Cucumber (Gy14) v1cgycuB314
Csa1G086930CmaCh13G001920Cucurbita maxima (Rimu)cmacuB203
Csa1G086930CmoCh13G001930Cucurbita moschata (Rifu)cmocuB188
Csa1G086930Cp4.1LG20g09070Cucurbita pepo (Zucchini)cpecuB516
Csa1G086930CsGy1G012900Cucumber (Gy14) v2cgybcuB001
Csa1G086930Carg21068Silver-seed gourdcarcuB0745
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G086930Watermelon (97103) v2cuwmbB028
Csa1G086930Wax gourdcuwgoB019
Csa1G086930Cucumber (Chinese Long) v2cucuB041
Csa1G086930Cucurbita maxima (Rimu)cmacuB431
Csa1G086930Cucurbita maxima (Rimu)cmacuB581
Csa1G086930Cucurbita moschata (Rifu)cmocuB421
Csa1G086930Cucurbita moschata (Rifu)cmocuB570
Csa1G086930Melon (DHL92) v3.5.1cumeB012
Csa1G086930Watermelon (Charleston Gray)cuwcgB033
Csa1G086930Watermelon (97103) v1cuwmB070
Csa1G086930Cucurbita pepo (Zucchini)cpecuB528
Csa1G086930Bottle gourd (USVL1VR-Ls)culsiB002
Csa1G086930Melon (DHL92) v3.6.1cumedB008
Csa1G086930Silver-seed gourdcarcuB0472