Carg21068 (gene) Silver-seed gourd

Overview
NameCarg21068
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPentatricopeptide repeat-containing protein, mitochondrial
LocationCucurbita_argyrosperma_scaffold_122 : 753202 .. 756040 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCTCCTCCTTCGCATTCGCATTCAGTTCTTGAGGAATTCCATTAACCAGCTCTGTAACTCGATTCCATCGAATCCACATTTCGTTTGTCTCAGAAGATTTTCATTTCATTCATGGTTCTTGAATACTGATCATGGTAACTTCAGCCATATTCTCCGTCTATCTCAAATCCAAAACTATCCAGCTCCCGTCCTCTCTTTTACGAAATTTTGTTTGAATTTCTACTCTAATAGTGCACCTTCAAGATCCTTTAGGAGGAGAGCGAGTAAGAGATTGAAATCCAGAATCAAACCTAAGCTGAACGAGGCTCAATTTCAGCACGCAATTTCTCAAATCCCTCCAAGGTTTAACTCCGAAGAACTCTATAATGTCATTTCTGTTCAGGGAGATCCTTTGGTGTGCTTTGAACTGTTCAATTGGGCCTCCCAGCAGTCTCGTTTCAGACATGATGTTTCCACTTATGAGATTACAATTAAGAAGCTGGGTGAGGCGAAAATGTACGAAGAAATGGATAATGTTGTGAATCAGGTGCTTGCTGTTCCTTCTATTGGTTCTGAGACTCTTTACAATACTATGATATATTTTTTTACTGAGGCAAGGAAGTTGACTAGAGCTATCAATATATTTAAGCATATGCAGAACAACAAAAACTTGAACTGTAGGCCTTCAATTAGAACCTATAATCTGCTTTTTACTGCATTCTTGAGTCGGGGTCGTAATGCTTATATAAATCTCATGTATATGGAGACTATTAGATGCCTCTTCAGACAGATGGTGAATGATGGCATTGAACCTGACATATTTACTTTAAATTGTATGATAAAGGGGTATGTGCTATCCCTTCATGTCAATGATGCTCTCAGGATCTTCCACCAAATGGGTGTTGTTTATAGTAGCCTCCCAAATTCATTTTCCTATGATTATTTGATTCACGGGTTATGCGCGCAAGCGCGAACGGATAATGCGAGGGAGTTGTGCAATGAAATGAAGGAAAAGGGGTTTGTGCCAAGTAGTATATCATATAATTCAATTGTTAATGCTATGGCTCTCAATGGAGAGGTTGAAGAAGCAGTGAATTATTTGTGGGAGATGATTGGTAATAGAAGGTCTCCTGATTTTATTACATATAAGACGGTATTGGATGAACTGTGCAGGCGAGGGAGGGTTGGAGAAGCCACGAGTTTGTTGAGGGAAGTGCAGGAGAAGGAACTTGTGGATGGTCATACTTATAGGAAACTTCTCTATGTGCTTGAAGATGACTATGGAAATGTAAATGGTGGATGGCCATGATCTGGAATCATGGATCGTGTGGTTTTTGAAGGTAGGATGGACTCATGACGTTTGATATCAGAGCCTCGCTGTGTGTTTTAGTCGGATCAAGCAGATAGAAAAGCGGCCTGTCTTGATTTCTCCCGGTGGTTGTTGTGTATCAATGGAAGGTTTACCGATGCCATTTGCTGAAAAGTTAGAAACCTATGATTTATTCAGATGCTTTACTTAATTTAGTTATCGATCAAGAAGATTCTTCTGGAGAATCATCAATCAATTGTGGCTACTCGGCTTAGAGCTGGTGCATATCTTTTGAAGCTTCAAGAGTTACAGCTGGTGCATATCTTTTGTGGCTACACGGCTTAAAAACGCTACAAATATTAGTCAATCAGCAAGGTAAAAAGTCTAGCAGCTTCGCTCCTTCACCTGTTGGTAAAGTAGCTTCGCTCCTCTCCTTTACAGTCTCACAATTCCATTGTCTGAACCTATTGGTAGAACAGCTTTGCTCCTTAGCCGACACCTATTTACCGAGAAAAAGAGAAAGAGATAAGCTATTCCATTGTTTGAACTTATTGGTAAAGCAGCTTTACTCCTTAGCCGACACCTATTTACTGAGAAAAAAAAAAAGAGAAGCTATTCTATTGTCTAAACTTATCAGTAAAGCAGCTTTGCTCCTTAGCTGACTCCTATTTATCGAGAAAAAGAGTAAGAGATAAGCTATTCCATTGTCAGAACCTATTCGTAAAGCAACTTTGCTTCTTAGCCGACACCTATTTACTGAGGAAAAGAGTAAGAGATAAAAGCTTATTGAGACTTCTTTAATAGCTTATAAATGCTTTTCTTCTCAACAACGTAAAAACTTTTGAACAATACTTGAAGCAGTGAAGCACTTCGACTTAGTTCATGAATCCAACTGTATACTGCTGGTACAGTCTCACATCCCTTCATTTCTTTTCATATAATAGGTGTATTCTCATGCGAAGCAGCCGTCTTTGTGGGACTTGAATTAGATGATATCTTCTCCAAAAGAAGCTCGGGATCCCTTTATGGCTTTTCCCCCATCAAGTTCAAGGTACTTTTTTCAAGCTGAGTTCATTTAACACTGAATTTTTTTGCATGAGGAATCAATATAGAAATTCATACAAGTCCAGCAGGATAGTGCTATATTTATAGTGCTCAAGACATGTTTCAATTTTTGACTAGTAGGTTGGTGTCTAGTAGAATTTGCATTTAGGAACATGAAGAATTGGAGTAAAACAACACTTGAGCTTAATGTATATTACACTAATCTTCTGTTTGCTATTGATCTGAAAATTAATCTAATTGTGTAAATGTAAAAAAGATATATGTGGATTTATATGTAGCAATACGCCAAAAGCAAATAATATTTAACTATAAGTTTGCTATTCTAGCATCGTGAATAAGATATCTATTACTATATTGTGAGTTTAAAAAGATTTAAAGAGAATTGCACGTGGATTGAAAAATGAAATCAATTCCAAACCTAGGCTTTTGTGATTACATTACACTTTTGTTCTACGATTTGTTGTAGAGAATAGAATTTTAG

mRNA sequence

ATGAATCTCCTCCTTCGCATTCGCATTCAGTTCTTGAGGAATTCCATTAACCAGCTCTGTAACTCGATTCCATCGAATCCACATTTCGTTTGTCTCAGAAGATTTTCATTTCATTCATGGTTCTTGAATACTGATCATGGTAACTTCAGCCATATTCTCCGTCTATCTCAAATCCAAAACTATCCAGCTCCCGTCCTCTCTTTTACGAAATTTTGTTTGAATTTCTACTCTAATAGTGCACCTTCAAGATCCTTTAGGAGGAGAGCGAGTAAGAGATTGAAATCCAGAATCAAACCTAAGCTGAACGAGGCTCAATTTCAGCACGCAATTTCTCAAATCCCTCCAAGGTTTAACTCCGAAGAACTCTATAATGTCATTTCTGTTCAGGGAGATCCTTTGGTGTGCTTTGAACTGTTCAATTGGGCCTCCCAGCAGTCTCGTTTCAGACATGATGTTTCCACTTATGAGATTACAATTAAGAAGCTGGGTGAGGCGAAAATGTACGAAGAAATGGATAATGTTGTGAATCAGGTGCTTGCTGTTCCTTCTATTGGTTCTGAGACTCTTTACAATACTATGATATATTTTTTTACTGAGGCAAGGAAGTTGACTAGAGCTATCAATATATTTAAGCATATGCAGAACAACAAAAACTTGAACTGTAGGCCTTCAATTAGAACCTATAATCTGCTTTTTACTGCATTCTTGAGTCGGGGTCGTAATGCTTATATAAATCTCATGTATATGGAGACTATTAGATGCCTCTTCAGACAGATGGTGAATGATGGCATTGAACCTGACATATTTACTTTAAATTGTATGATAAAGGGGTATGTGCTATCCCTTCATGTCAATGATGCTCTCAGGATCTTCCACCAAATGGGTGTTGTTTATAGTAGCCTCCCAAATTCATTTTCCTATGATTATTTGATTCACGGGTTATGCGCGCAAGCGCGAACGGATAATGCGAGGGAGTTGTGCAATGAAATGAAGGAAAAGGGGTTTGTGCCAAGTAGTATATCATATAATTCAATTGTTAATGCTATGGCTCTCAATGGAGAGGTTGAAGAAGCAGTGAATTATTTGTGGGAGATGATTGGTAATAGAAGGTCTCCTGATTTTATTACATATAAGACGGTATTGGATGAACTGTGCAGGCGAGGGAGGGTTGGAGAAGCCACGAGTTTGTTGAGGGAAGTGCAGGAGAAGGAACTTGTGGATGGTCATACTTATAGGAAACTTCTCTATGTGCTTGAAGATGACTATGGAAATGTAAATGGTGTATTCTCATGCGAAGCAGCCGTCTTTGTGGGACTTGAATTAGATGATATCTTCTCCAAAAGAAGCTCGGGATCCCTTTATGGCTTTTCCCCCATCAAGTTCAAGAGAATAGAATTTTAG

Coding sequence (CDS)

ATGAATCTCCTCCTTCGCATTCGCATTCAGTTCTTGAGGAATTCCATTAACCAGCTCTGTAACTCGATTCCATCGAATCCACATTTCGTTTGTCTCAGAAGATTTTCATTTCATTCATGGTTCTTGAATACTGATCATGGTAACTTCAGCCATATTCTCCGTCTATCTCAAATCCAAAACTATCCAGCTCCCGTCCTCTCTTTTACGAAATTTTGTTTGAATTTCTACTCTAATAGTGCACCTTCAAGATCCTTTAGGAGGAGAGCGAGTAAGAGATTGAAATCCAGAATCAAACCTAAGCTGAACGAGGCTCAATTTCAGCACGCAATTTCTCAAATCCCTCCAAGGTTTAACTCCGAAGAACTCTATAATGTCATTTCTGTTCAGGGAGATCCTTTGGTGTGCTTTGAACTGTTCAATTGGGCCTCCCAGCAGTCTCGTTTCAGACATGATGTTTCCACTTATGAGATTACAATTAAGAAGCTGGGTGAGGCGAAAATGTACGAAGAAATGGATAATGTTGTGAATCAGGTGCTTGCTGTTCCTTCTATTGGTTCTGAGACTCTTTACAATACTATGATATATTTTTTTACTGAGGCAAGGAAGTTGACTAGAGCTATCAATATATTTAAGCATATGCAGAACAACAAAAACTTGAACTGTAGGCCTTCAATTAGAACCTATAATCTGCTTTTTACTGCATTCTTGAGTCGGGGTCGTAATGCTTATATAAATCTCATGTATATGGAGACTATTAGATGCCTCTTCAGACAGATGGTGAATGATGGCATTGAACCTGACATATTTACTTTAAATTGTATGATAAAGGGGTATGTGCTATCCCTTCATGTCAATGATGCTCTCAGGATCTTCCACCAAATGGGTGTTGTTTATAGTAGCCTCCCAAATTCATTTTCCTATGATTATTTGATTCACGGGTTATGCGCGCAAGCGCGAACGGATAATGCGAGGGAGTTGTGCAATGAAATGAAGGAAAAGGGGTTTGTGCCAAGTAGTATATCATATAATTCAATTGTTAATGCTATGGCTCTCAATGGAGAGGTTGAAGAAGCAGTGAATTATTTGTGGGAGATGATTGGTAATAGAAGGTCTCCTGATTTTATTACATATAAGACGGTATTGGATGAACTGTGCAGGCGAGGGAGGGTTGGAGAAGCCACGAGTTTGTTGAGGGAAGTGCAGGAGAAGGAACTTGTGGATGGTCATACTTATAGGAAACTTCTCTATGTGCTTGAAGATGACTATGGAAATGTAAATGGTGTATTCTCATGCGAAGCAGCCGTCTTTGTGGGACTTGAATTAGATGATATCTTCTCCAAAAGAAGCTCGGGATCCCTTTATGGCTTTTCCCCCATCAAGTTCAAGAGAATAGAATTTTAG

Protein sequence

MNLLLRIRIQFLRNSINQLCNSIPSNPHFVCLRRFSFHSWFLNTDHGNFSHILRLSQIQNYPAPVLSFTKFCLNFYSNSAPSRSFRRRASKRLKSRIKPKLNEAQFQHAISQIPPRFNSEELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNKNLNCRPSIRTYNLLFTAFLSRGRNAYINLMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRIFHQMGVVYSSLPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEAVNYLWEMIGNRRSPDFITYKTVLDELCRRGRVGEATSLLREVQEKELVDGHTYRKLLYVLEDDYGNVNGVFSCEAAVFVGLELDDIFSKRSSGSLYGFSPIKFKRIEF
Homology
[Close]
BLAST of Carg21068 vs. NCBI nr
Match: XP_022965006.1 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 713.8 bits (1841), Expect = 3.9e-202
Identity = 427/427 (100.00%), Postives = 427/427 (100.00%), Query Frame = 0 

Query: 1   MNLLLRIRIQFLRNSINQLCNSIPSNPHFVCLRRFSFHSWFLNTDHGNFSHILRLSQIQN 60
           MNLLLRIRIQFLRNSINQLCNSIPSNPHFVCLRRFSFHSWFLNTDHGNFSHILRLSQIQN
Sbjct: 1   MNLLLRIRIQFLRNSINQLCNSIPSNPHFVCLRRFSFHSWFLNTDHGNFSHILRLSQIQN 60

Query: 61  YPAPVLSFTKFCLNFYSNSAPSRSFRRRASKRLKSRIKPKLNEAQFQHAISQIPPRFNSE 120
           YPAPVLSFTKFCLNFYSNSAPSRSFRRRASKRLKSRIKPKLNEAQFQHAISQIPPRFNSE
Sbjct: 61  YPAPVLSFTKFCLNFYSNSAPSRSFRRRASKRLKSRIKPKLNEAQFQHAISQIPPRFNSE 120

Query: 121 ELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLA 180
           ELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLA
Sbjct: 121 ELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLA 180

Query: 181 VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNKNLNCRPSIRTYNLLFTAFLSRGR 240
           VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNKNLNCRPSIRTYNLLFTAFLSRGR
Sbjct: 181 VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNKNLNCRPSIRTYNLLFTAFLSRGR 240

Query: 241 NAYINLMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRIFHQMGVVYSS 300
           NAYINLMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRIFHQMGVVYSS
Sbjct: 241 NAYINLMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRIFHQMGVVYSS 300

Query: 301 LPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXXXX 360
           LPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 LPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQEKELVDGHTYRKLLYVLED 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQEKELVDGHTYRKLLYVLED
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQEKELVDGHTYRKLLYVLED 420

Query: 421 DYGNVNG 428
           DYGNVNG
Sbjct: 421 DYGNVNG 427

[Close]
BLAST of Carg21068 vs. NCBI nr
Match: XP_023519586.1 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023519587.1 pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023519588.1 pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 704.9 bits (1818), Expect = 1.8e-199
Identity = 422/427 (98.83%), Postives = 424/427 (99.30%), Query Frame = 0 

Query: 1   MNLLLRIRIQFLRNSINQLCNSIPSNPHFVCLRRFSFHSWFLNTDHGNFSHILRLSQIQN 60
           MNLLLRIRIQFLRNSINQLCNSIPSNPHFVCLRRFSFHSW LNTDHGNFSHI RLSQIQN
Sbjct: 1   MNLLLRIRIQFLRNSINQLCNSIPSNPHFVCLRRFSFHSWLLNTDHGNFSHIFRLSQIQN 60

Query: 61  YPAPVLSFTKFCLNFYSNSAPSRSFRRRASKRLKSRIKPKLNEAQFQHAISQIPPRFNSE 120
           YPAPVLSFTKFCLNFYSN APSRSFRRRASKRLKSRIKPKLNEAQFQHAISQIPPRFNSE
Sbjct: 61  YPAPVLSFTKFCLNFYSNRAPSRSFRRRASKRLKSRIKPKLNEAQFQHAISQIPPRFNSE 120

Query: 121 ELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLA 180
           ELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLA
Sbjct: 121 ELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLA 180

Query: 181 VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNKNLNCRPSIRTYNLLFTAFLSRGR 240
           VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNKN+NCRPSIRTYNLLFTAFLSRGR
Sbjct: 181 VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNKNVNCRPSIRTYNLLFTAFLSRGR 240

Query: 241 NAYINLMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRIFHQMGVVYSS 300
           NAYINLMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRIFHQMGVVYSS
Sbjct: 241 NAYINLMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRIFHQMGVVYSS 300

Query: 301 LPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXXXX 360
           LPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 LPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQEKELVDGHTYRKLLYVLED 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQEKELVDGHTYRKLLYVLED
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQEKELVDGHTYRKLLYVLED 420

Query: 421 DYGNVNG 428
           DYGNV+G
Sbjct: 421 DYGNVHG 427

[Close]
BLAST of Carg21068 vs. NCBI nr
Match: XP_022970418.1 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita maxima] >XP_022970419.1 pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita maxima] >XP_022970420.1 pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita maxima] >XP_022970421.1 pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 694.9 bits (1792), Expect = 1.9e-196
Identity = 419/427 (98.13%), Postives = 422/427 (98.83%), Query Frame = 0 

Query: 1   MNLLLRIRIQFLRNSINQLCNSIPSNPHFVCLRRFSFHSWFLNTDHGNFSHILRLSQIQN 60
           MNLLLRIRIQFLRNSINQLCNSIPSNP+FVCLRRFSFHS  LNTDHGNFSHILRLSQIQN
Sbjct: 1   MNLLLRIRIQFLRNSINQLCNSIPSNPYFVCLRRFSFHSLLLNTDHGNFSHILRLSQIQN 60

Query: 61  YPAPVLSFTKFCLNFYSNSAPSRSFRRRASKRLKSRIKPKLNEAQFQHAISQIPPRFNSE 120
           YPAPVLSFTKFCLNFYSN APSRSFRRRASKRLKSRIKPKLNEAQFQ AISQIPPRFNSE
Sbjct: 61  YPAPVLSFTKFCLNFYSNRAPSRSFRRRASKRLKSRIKPKLNEAQFQQAISQIPPRFNSE 120

Query: 121 ELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLA 180
           ELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLA
Sbjct: 121 ELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLA 180

Query: 181 VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNKNLNCRPSIRTYNLLFTAFLSRGR 240
           VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN+NLNCRPSIRTYNLLFTAFLSRGR
Sbjct: 181 VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGR 240

Query: 241 NAYINLMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRIFHQMGVVYSS 300
           NAYIN MYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALR+FHQMGVVYSS
Sbjct: 241 NAYINHMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRVFHQMGVVYSS 300

Query: 301 LPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXXXX 360
           LPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 LPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQEKELVDGHTYRKLLYVLED 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQEKELVDGHTYRKLLYVLED
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQEKELVDGHTYRKLLYVLED 420

Query: 421 DYGNVNG 428
           DYGNVNG
Sbjct: 421 DYGNVNG 427

[Close]
BLAST of Carg21068 vs. NCBI nr
Match: XP_008463631.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucumis melo] >XP_008463637.1 PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucumis melo] >XP_008463644.1 PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucumis melo])

HSP 1 Score: 587.4 bits (1513), Expect = 4.2e-164
Identity = 371/428 (86.68%), Postives = 390/428 (91.12%), Query Frame = 0 

Query: 1   MNLLLRIRIQFLRNSINQLCNSIPSNPHFVCLRRFSFHSWFL-NTDHGNFSHILRLSQIQ 60
           MN L RIRI F  NSIN L NS PS PHF+C RRFS HS  L NT H N +H LR+SQIQ
Sbjct: 1   MNPLFRIRIHFSTNSINHLFNSNPSYPHFICFRRFSIHSLSLNNTHHCNLTHFLRVSQIQ 60

Query: 61  NYPAPVLSFTKFCLNFYSNSAPSRSFRRRASKRLKSRIKPKLNEAQFQHAISQIPPRFNS 120
            YPAP LSFTKFCLNFYS +APSRSFRRRA+KRLK+ +KP L+EAQFQ A+S+IPPRF  
Sbjct: 61  TYPAPNLSFTKFCLNFYSKTAPSRSFRRRANKRLKASLKPTLDEAQFQLAVSKIPPRFTP 120

Query: 121 EELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVL 180
           EEL NVIS+Q DPLVCFELFNWASQQ RF+HDVS+YEITIKKLGEAKMYEEMD+VVNQ L
Sbjct: 121 EELRNVISLQKDPLVCFELFNWASQQPRFKHDVSSYEITIKKLGEAKMYEEMDHVVNQAL 180

Query: 181 AVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNKNLNCRPSIRTYNLLFTAFLSRG 240
           AV SIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN+NLNCRPSIRTYNLLFTAFLSRG
Sbjct: 181 AVSSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240

Query: 241 RNAYINLMYMETIRCLFRQMVN-DGIEPDIFTLNCMIKGYVLSLHVNDALRIFHQMGVVY 300
           RN YIN +YMETIRCLFRQMVN DGIEPDIF LNCMIKGYVLSLHVNDALRIFHQMGVVY
Sbjct: 241 RNTYINHVYMETIRCLFRQMVNDDGIEPDIFALNCMIKGYVLSLHVNDALRIFHQMGVVY 300

Query: 301 SSLPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXX 360
           S LPNS+SYDYLIHGL AQARTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 SCLPNSYSYDYLIHGLSAQARTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQEKELVDGHTYRKLLYVL 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QEK+LVDGHTYRKLLYVL
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEKDLVDGHTYRKLLYVL 420

Query: 421 EDDYGNVN 427
           EDDYGN+N
Sbjct: 421 EDDYGNLN 428

[Close]
BLAST of Carg21068 vs. NCBI nr
Match: XP_022157934.1 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial [Momordica charantia] >XP_022157935.1 pentatricopeptide repeat-containing protein At2g27800, mitochondrial [Momordica charantia] >XP_022157936.1 pentatricopeptide repeat-containing protein At2g27800, mitochondrial [Momordica charantia] >XP_022157937.1 pentatricopeptide repeat-containing protein At2g27800, mitochondrial [Momordica charantia] >XP_022157938.1 pentatricopeptide repeat-containing protein At2g27800, mitochondrial [Momordica charantia] >XP_022157939.1 pentatricopeptide repeat-containing protein At2g27800, mitochondrial [Momordica charantia])

HSP 1 Score: 587.4 bits (1513), Expect = 4.2e-164
Identity = 373/426 (87.56%), Postives = 390/426 (91.55%), Query Frame = 0 

Query: 1   MNLLLRIRIQFLRNSINQLCNSIPSNPHFVCLRRFSFHSWFLNTDHGNFSHILRLSQIQN 60
           MNLL   RIQF R SIN L NS  SNPHFV LR FS HS  LN++HGN    L LSQI+N
Sbjct: 1   MNLL---RIQFSRISINHLRNSNLSNPHFVSLRTFSTHSSLLNSNHGNCRSFLLLSQIRN 60

Query: 61  YPAPVLSFTKFCLNFYSNSAPSRSFRRRASKRLKSRIKPKLNEAQFQHAISQIPPRFNSE 120
            P PV+SFTKF LNF+S+ APSRSFRRRASKRLKS IKP L+E  FQ A+SQIPPRF+ E
Sbjct: 61  CPVPVVSFTKFRLNFFSSRAPSRSFRRRASKRLKSSIKPSLDETLFQAAVSQIPPRFSPE 120

Query: 121 ELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLA 180
           EL NVIS+Q DP+VCFELFNWASQQ RFRHDVSTYEITIKKLGEAKM+EEMD+VVNQVLA
Sbjct: 121 ELCNVISLQEDPMVCFELFNWASQQPRFRHDVSTYEITIKKLGEAKMFEEMDDVVNQVLA 180

Query: 181 VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNKNLNCRPSIRTYNLLFTAFLSRGR 240
           VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN+NLNCRPSIRTYNLLFTAFLSRGR
Sbjct: 181 VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGR 240

Query: 241 NAYINLMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRIFHQMGVVYSS 300
           NAYIN MYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLH+NDALRIFHQMGVVYSS
Sbjct: 241 NAYINHMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHINDALRIFHQMGVVYSS 300

Query: 301 LPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXXXX 360
           LPNSFSYDYLIHGLCAQ RTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 LPNSFSYDYLIHGLCAQGRTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQEKELVDGHTYRKLLYVLED 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QEK+LVDGHTYRKL YVLED
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEKDLVDGHTYRKLCYVLED 420

Query: 421 DYGNVN 427
           DYGN+N
Sbjct: 421 DYGNLN 423

[Close]
BLAST of Carg21068 vs. TAIR10
Match: AT2G27800.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 359.4 bits (921), Expect = 3.4e-99
Identity = 171/260 (65.77%), Postives = 209/260 (80.38%), Query Frame = 0 

Query: 76  YSNSAPSRSFRRRASKRLKSRIKPKLNEAQFQHAISQIPPRFNSEELYNVISVQGDPLVC 135
           YS S P+RS RRR S R KS  KP LN ++F   IS++PPRF  EEL + I+++ DP +C
Sbjct: 96  YSTSVPTRSLRRRISNRKKSSAKPILNVSKFHETISKLPPRFTPEELADAITLEEDPFLC 155

Query: 136 FELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLAVPSIGSETLYNTMIY 195
           F LFNWASQQ RF H+  +Y I I+KLG AKMY+EMD++VNQVL+V  IG+E LYN++I+
Sbjct: 156 FHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIF 215

Query: 196 FFTEARKLTRAINIFKHMQNNKNLNCRPSIRTYNLLFTAFLSRGRNAYINLMYMETIRCL 255
           +FT+A KL RA+NIF+HM  +KNL CRP+IRTY++LF A L RG N+YIN +YMET+R L
Sbjct: 216 YFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSL 275

Query: 256 FRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRIFHQMGVVYSSLPNSFSYDYLIHGLC 315
           FRQMV+ GIEPD+F LNC++KGYVLSLHVNDALRIFHQM VVY   PNSF+YDYLIHGLC
Sbjct: 276 FRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLC 335

Query: 316 AQARTDNARELCNEMKEKGF 336
           AQ RT NAREL +EMK KGF
Sbjct: 336 AQGRTINARELLSEMKGKGF 355

[Close]
BLAST of Carg21068 vs. TAIR10
Match: AT5G27300.1 (pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 212.2 bits (539), Expect = 6.7e-55
Identity = 112/248 (45.16%), Postives = 150/248 (60.48%), Query Frame = 0 

Query: 76  YSNSAPSRSFRRRASKRLKSRIKPKLNEAQFQHAISQIPPRFNSEELYNVISVQGDPLVC 135
           YS S P+RS RRR S R KS  KP LNE++FQ  IS++PPRF  EEL + I+++ DP +C
Sbjct: 89  YSTSVPTRSLRRRISSRKKSSTKPILNESKFQETISKLPPRFTPEELADAITLEEDPFLC 148

Query: 136 FELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLAVPSIGSETLYNTMIY 195
           F LFNWASQQ RF H+  +Y I I+KLG AK                             
Sbjct: 149 FHLFNWASQQPRFTHENCSYHIAIRKLGAAK----------------------------- 208

Query: 196 FFTEARKLTRAINIFKHMQNNKNLNCRPSIRTYNLLFTAFLSRGRNAYINLMYMETIRCL 255
               + KL RA+NIF+HM N++NL CRP++RTY++LF A L RG N++IN +YMET+R L
Sbjct: 209 ----SGKLIRAVNIFRHMVNSRNLECRPTMRTYHILFKALLGRGNNSFINHLYMETVRSL 268

Query: 256 FRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRIFHQMGVVYSSLPNSFSYDYLIHGLC 315
           FRQMV+ GIEPD+F LNC++KG   +++  + L      G V    PN  SY+ L++   
Sbjct: 269 FRQMVDSGIEPDVFALNCLVKG--RTINTRELLSEMKGKGFV----PNGKSYNSLVNAFA 297

Query: 316 AQARTDNA 324
                D+A
Sbjct: 329 LSGEIDDA 297

[Close]
BLAST of Carg21068 vs. TAIR10
Match: AT3G25210.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 102.8 bits (255), Expect = 5.7e-22
Identity = 64/233 (27.47%), Postives = 115/233 (49.36%), Query Frame = 0 

Query: 59  QNYPAPVLSFTKFCLNFYSNSAPSRSFRRRASKRLKSRIKPKLNEAQFQHAISQIPPRFN 118
           +N   P LS     L+   +S  S      +  R+++R      E QF+  I  + P F 
Sbjct: 18  RNLSPPFLSTAVNHLSLSFSSVSSSPESHTSPSRIRTRTP---LETQFETWIQNLKPGFT 77

Query: 119 SEELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQV 178
           + ++   +  Q DP +  ++F W +QQ  ++H+   Y   IK+    K    ++ ++ +V
Sbjct: 78  NSDVVIALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTMIKQAITGKRNNFVETLIEEV 137

Query: 179 LAVPSIGSETLYNTMIYFFTEARKL-TRAINIFKHMQNNKNLNCRPSIRTYNLLFTAFLS 238
           +A     S  LYN +I F    + L  RA +++  M  +   + +P + TY LL ++ L 
Sbjct: 138 IAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSD--DSKPDLETYTLLLSSLLK 197

Query: 239 RGRNAYINLMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRI 291
           R     +  +Y+  +R L +QM ++G+ PD F LN +IK Y   L V++A+R+
Sbjct: 198 RFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRV 245

[Close]
BLAST of Carg21068 vs. TAIR10
Match: AT3G16010.1 (Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 72.4 bits (176), Expect = 8.3e-13
Identity = 43/173 (24.86%), Postives = 87/173 (50.29%), Query Frame = 0 

Query: 124 NVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLAVPS 183
           +++ +  +  V  + F WA ++  F+HD STY   I+ L EA++Y EM   + +V+    
Sbjct: 98  SILEIDVEINVKIQFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTY 157

Query: 184 IG-SETLYNTMIYFFTEARKLTRAINIFKHMQNNKNLNCRPSIRTYNLLFTAFLSRGRNA 243
           +  S  + + ++     A+ +++A+++F   +  K   C+P+  TYN +    +  G++ 
Sbjct: 158 VSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRK---CKPTSSTYNSVILMLMQEGQHE 217

Query: 244 YINLMYMETIRCLFRQMVNDG-IEPDIFTLNCMIKGYVLSLHVNDALRIFHQM 295
            ++ +Y E        M N+G   PD  T + +I  Y      + A+R+F +M
Sbjct: 218 KVHEVYTE--------MCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEM 259

[Close]
BLAST of Carg21068 vs. TAIR10
Match: AT5G18475.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 66.6 bits (161), Expect = 4.5e-11
Identity = 50/214 (23.36%), Postives = 99/214 (46.26%), Query Frame = 0 

Query: 120 EELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVL 179
           E   +++  + DP    ++FN ASQQ  F H+ +TY + +  L   K +  +D +++Q+ 
Sbjct: 57  ESAVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMK 116

Query: 180 AVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNKNLNCRPSIRTYNLLFTAFLSRG 239
                  E+L+  ++  F+ +    + + +F  +Q    +  +PS+   +      +  G
Sbjct: 117 YETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARV--KPSLNAISTCLNLLIDSG 176

Query: 240 RNAYINLMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRIFHQMGVVYS 299
               +NL    + + L     N G++P+    N ++K +  +  +N A  +  +M     
Sbjct: 177 E---VNL----SRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGI 236

Query: 300 SLPNSFSYDYLIHGLCAQARTDNARELCNEMKEK 334
           S PNS +Y  L+  L A +R+  A EL  +M  K
Sbjct: 237 SYPNSITYSTLMDCLFAHSRSKEAVELFEDMISK 261

[Close]
BLAST of Carg21068 vs. Swiss-Prot
Match: sp|Q9ZUY1|PP173_ARATH (Pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g27800 PE=3 SV=2)

HSP 1 Score: 359.4 bits (921), Expect = 6.1e-98
Identity = 171/260 (65.77%), Postives = 209/260 (80.38%), Query Frame = 0 

Query: 76  YSNSAPSRSFRRRASKRLKSRIKPKLNEAQFQHAISQIPPRFNSEELYNVISVQGDPLVC 135
           YS S P+RS RRR S R KS  KP LN ++F   IS++PPRF  EEL + I+++ DP +C
Sbjct: 96  YSTSVPTRSLRRRISNRKKSSAKPILNVSKFHETISKLPPRFTPEELADAITLEEDPFLC 155

Query: 136 FELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLAVPSIGSETLYNTMIY 195
           F LFNWASQQ RF H+  +Y I I+KLG AKMY+EMD++VNQVL+V  IG+E LYN++I+
Sbjct: 156 FHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIF 215

Query: 196 FFTEARKLTRAINIFKHMQNNKNLNCRPSIRTYNLLFTAFLSRGRNAYINLMYMETIRCL 255
           +FT+A KL RA+NIF+HM  +KNL CRP+IRTY++LF A L RG N+YIN +YMET+R L
Sbjct: 216 YFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSL 275

Query: 256 FRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRIFHQMGVVYSSLPNSFSYDYLIHGLC 315
           FRQMV+ GIEPD+F LNC++KGYVLSLHVNDALRIFHQM VVY   PNSF+YDYLIHGLC
Sbjct: 276 FRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLC 335

Query: 316 AQARTDNARELCNEMKEKGF 336
           AQ RT NAREL +EMK KGF
Sbjct: 336 AQGRTINARELLSEMKGKGF 355

[Close]
BLAST of Carg21068 vs. Swiss-Prot
Match: sp|Q9LSF5|PP254_ARATH (Pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g25210 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.0e-20
Identity = 64/233 (27.47%), Postives = 115/233 (49.36%), Query Frame = 0 

Query: 59  QNYPAPVLSFTKFCLNFYSNSAPSRSFRRRASKRLKSRIKPKLNEAQFQHAISQIPPRFN 118
           +N   P LS     L+   +S  S      +  R+++R      E QF+  I  + P F 
Sbjct: 18  RNLSPPFLSTAVNHLSLSFSSVSSSPESHTSPSRIRTRTP---LETQFETWIQNLKPGFT 77

Query: 119 SEELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQV 178
           + ++   +  Q DP +  ++F W +QQ  ++H+   Y   IK+    K    ++ ++ +V
Sbjct: 78  NSDVVIALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTMIKQAITGKRNNFVETLIEEV 137

Query: 179 LAVPSIGSETLYNTMIYFFTEARKL-TRAINIFKHMQNNKNLNCRPSIRTYNLLFTAFLS 238
           +A     S  LYN +I F    + L  RA +++  M  +   + +P + TY LL ++ L 
Sbjct: 138 IAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSD--DSKPDLETYTLLLSSLLK 197

Query: 239 RGRNAYINLMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRI 291
           R     +  +Y+  +R L +QM ++G+ PD F LN +IK Y   L V++A+R+
Sbjct: 198 RFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRV 245

[Close]
BLAST of Carg21068 vs. Swiss-Prot
Match: sp|Q9LW84|PP236_ARATH (Pentatricopeptide repeat-containing protein At3g16010 OS=Arabidopsis thaliana OX=3702 GN=At3g16010 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.5e-11
Identity = 43/173 (24.86%), Postives = 87/173 (50.29%), Query Frame = 0 

Query: 124 NVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLAVPS 183
           +++ +  +  V  + F WA ++  F+HD STY   I+ L EA++Y EM   + +V+    
Sbjct: 98  SILEIDVEINVKIQFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTY 157

Query: 184 IG-SETLYNTMIYFFTEARKLTRAINIFKHMQNNKNLNCRPSIRTYNLLFTAFLSRGRNA 243
           +  S  + + ++     A+ +++A+++F   +  K   C+P+  TYN +    +  G++ 
Sbjct: 158 VSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRK---CKPTSSTYNSVILMLMQEGQHE 217

Query: 244 YINLMYMETIRCLFRQMVNDG-IEPDIFTLNCMIKGYVLSLHVNDALRIFHQM 295
            ++ +Y E        M N+G   PD  T + +I  Y      + A+R+F +M
Sbjct: 218 KVHEVYTE--------MCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEM 259

[Close]
BLAST of Carg21068 vs. Swiss-Prot
Match: sp|Q3E9F0|PP392_ARATH (Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana OX=3702 GN=At5g18475 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 8.2e-10
Identity = 50/214 (23.36%), Postives = 99/214 (46.26%), Query Frame = 0 

Query: 120 EELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVL 179
           E   +++  + DP    ++FN ASQQ  F H+ +TY + +  L   K +  +D +++Q+ 
Sbjct: 57  ESAVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMK 116

Query: 180 AVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNKNLNCRPSIRTYNLLFTAFLSRG 239
                  E+L+  ++  F+ +    + + +F  +Q    +  +PS+   +      +  G
Sbjct: 117 YETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARV--KPSLNAISTCLNLLIDSG 176

Query: 240 RNAYINLMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRIFHQMGVVYS 299
               +NL    + + L     N G++P+    N ++K +  +  +N A  +  +M     
Sbjct: 177 E---VNL----SRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGI 236

Query: 300 SLPNSFSYDYLIHGLCAQARTDNARELCNEMKEK 334
           S PNS +Y  L+  L A +R+  A EL  +M  K
Sbjct: 237 SYPNSITYSTLMDCLFAHSRSKEAVELFEDMISK 261

[Close]
BLAST of Carg21068 vs. Swiss-Prot
Match: sp|Q9MAG8|PPR79_ARATH (Putative pentatricopeptide repeat-containing protein At1g53330 OS=Arabidopsis thaliana OX=3702 GN=At1g53330 PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.2e-08
Identity = 48/183 (26.23%), Postives = 91/183 (49.73%), Query Frame = 0 

Query: 118 NSEELYNVISVQGDPLVCFELFNWASQQSR-----FRHDVSTYEITIKKLGEAKMYEEMD 177
           +S  L +++  + DP    +LF     +S      FR+ +  Y+I I KLG +KM++E+D
Sbjct: 8   SSFRLASLLRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELD 67

Query: 178 NVVNQVLA-VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNKNLNCRPSIRTYNLL 237
            V+  +      + +E ++  +I FF   +  +RA+++F  M   +   C+ ++++ N L
Sbjct: 68  QVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYR---CQRTVKSLNSL 127

Query: 238 FTAFLSRGRNAYINLMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRIF 295
            +A L  G         +E ++     +   G +PD  T N +I G   S   +DAL++F
Sbjct: 128 LSALLKCGE--------LEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLF 178

[Close]
BLAST of Carg21068 vs. TrEMBL
Match: tr|A0A1S3CJQ6|A0A1S3CJQ6_CUCME (pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103501729 PE=4 SV=1)

HSP 1 Score: 587.4 bits (1513), Expect = 2.8e-164
Identity = 371/428 (86.68%), Postives = 390/428 (91.12%), Query Frame = 0 

Query: 1   MNLLLRIRIQFLRNSINQLCNSIPSNPHFVCLRRFSFHSWFL-NTDHGNFSHILRLSQIQ 60
           MN L RIRI F  NSIN L NS PS PHF+C RRFS HS  L NT H N +H LR+SQIQ
Sbjct: 1   MNPLFRIRIHFSTNSINHLFNSNPSYPHFICFRRFSIHSLSLNNTHHCNLTHFLRVSQIQ 60

Query: 61  NYPAPVLSFTKFCLNFYSNSAPSRSFRRRASKRLKSRIKPKLNEAQFQHAISQIPPRFNS 120
            YPAP LSFTKFCLNFYS +APSRSFRRRA+KRLK+ +KP L+EAQFQ A+S+IPPRF  
Sbjct: 61  TYPAPNLSFTKFCLNFYSKTAPSRSFRRRANKRLKASLKPTLDEAQFQLAVSKIPPRFTP 120

Query: 121 EELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVL 180
           EEL NVIS+Q DPLVCFELFNWASQQ RF+HDVS+YEITIKKLGEAKMYEEMD+VVNQ L
Sbjct: 121 EELRNVISLQKDPLVCFELFNWASQQPRFKHDVSSYEITIKKLGEAKMYEEMDHVVNQAL 180

Query: 181 AVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNKNLNCRPSIRTYNLLFTAFLSRG 240
           AV SIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN+NLNCRPSIRTYNLLFTAFLSRG
Sbjct: 181 AVSSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240

Query: 241 RNAYINLMYMETIRCLFRQMVN-DGIEPDIFTLNCMIKGYVLSLHVNDALRIFHQMGVVY 300
           RN YIN +YMETIRCLFRQMVN DGIEPDIF LNCMIKGYVLSLHVNDALRIFHQMGVVY
Sbjct: 241 RNTYINHVYMETIRCLFRQMVNDDGIEPDIFALNCMIKGYVLSLHVNDALRIFHQMGVVY 300

Query: 301 SSLPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXX 360
           S LPNS+SYDYLIHGL AQARTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 SCLPNSYSYDYLIHGLSAQARTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQEKELVDGHTYRKLLYVL 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QEK+LVDGHTYRKLLYVL
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEKDLVDGHTYRKLLYVL 420

Query: 421 EDDYGNVN 427
           EDDYGN+N
Sbjct: 421 EDDYGNLN 428

[Close]
BLAST of Carg21068 vs. TrEMBL
Match: tr|A0A0A0LS50|A0A0A0LS50_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G086930 PE=4 SV=1)

HSP 1 Score: 583.9 bits (1504), Expect = 3.1e-163
Identity = 368/428 (85.98%), Postives = 389/428 (90.89%), Query Frame = 0 

Query: 1   MNLLLRIRIQFLRNSINQLCNSIPSNPHFVCLRRFSFHSWFL-NTDHGNFSHILRLSQIQ 60
           MNLLLRIRI F  NSI+ L NS PS PHFVC RRFS HSW+L NT H N  H LR+SQI 
Sbjct: 1   MNLLLRIRIHFSTNSIDHLFNSNPSYPHFVCFRRFSIHSWWLNNTHHYNLPHFLRVSQIH 60

Query: 61  NYPAPVLSFTKFCLNFYSNSAPSRSFRRRASKRLKSRIKPKLNEAQFQHAISQIPPRFNS 120
            Y  P LSFT F L FYS +APSRSFR+RA+KRLKS +KPKL+E QFQ A+S+IPPRF S
Sbjct: 61  PYSGPNLSFTNFLLKFYSRAAPSRSFRKRANKRLKSSLKPKLDETQFQLAVSKIPPRFTS 120

Query: 121 EELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVL 180
           EEL NVIS+Q DPLVCFELFNWASQQ RFRHD S+YEITIKKLGEAKMYEEMD+VVNQ L
Sbjct: 121 EELCNVISLQRDPLVCFELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQAL 180

Query: 181 AVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNKNLNCRPSIRTYNLLFTAFLSRG 240
           AV SIGSETLYNTMIYFFTEARKLTRA+NIFKHMQNN+NLNCRPSIRTYNLLFTAFLSRG
Sbjct: 181 AVSSIGSETLYNTMIYFFTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240

Query: 241 RNAYINLMYMETIRCLFRQMVN-DGIEPDIFTLNCMIKGYVLSLHVNDALRIFHQMGVVY 300
           RN YIN MYMETIRCLFRQMVN DGIEPDIF+LNCMIKGYVLSLHVNDALRIFHQMGVVY
Sbjct: 241 RNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVY 300

Query: 301 SSLPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXX 360
           S LPNS+S+DYLIHGLCAQARTDNA+ELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 SCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQEKELVDGHTYRKLLYVL 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QEK+LVDGHTYRKLLYVL
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEKDLVDGHTYRKLLYVL 420

Query: 421 EDDYGNVN 427
           EDDYGN+N
Sbjct: 421 EDDYGNLN 428

[Close]
BLAST of Carg21068 vs. TrEMBL
Match: tr|A0A2N9FRL4|A0A2N9FRL4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17745 PE=4 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 6.3e-124
Identity = 302/377 (80.11%), Postives = 332/377 (88.06%), Query Frame = 0 

Query: 53  LRLS-QIQNYPAP-VLSFTKFCL---NFYSNSAPSRSFRRRASKRLKSRIKPKLNEAQFQ 112
           +RLS Q Q  P P +LS    CL   + YS  APSRSFRRR SKR K   KP+LNEAQFQ
Sbjct: 1   MRLSNQTQVAPRPQLLSNEILCLSLNSLYSTKAPSRSFRRRESKRSKLNAKPRLNEAQFQ 60

Query: 113 HAISQIPPRFNSEELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKM 172
            A+SQ+ PRF +EEL NVI++Q DP+VCFELFNWASQQ RFRHDV TY ITIKKLG AKM
Sbjct: 61  RAVSQLTPRFTAEELCNVITLQEDPIVCFELFNWASQQHRFRHDVCTYHITIKKLGAAKM 120

Query: 173 YEEMDNVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNKNLNCRPSIRT 232
           YEEMDNVVNQVLAVP IGSE LYNT+IYF TEARKLTRA+N+FKHM+N++NL+CRPSIRT
Sbjct: 121 YEEMDNVVNQVLAVPYIGSEALYNTVIYFSTEARKLTRAVNVFKHMRNSRNLDCRPSIRT 180

Query: 233 YNLLFTAFLSRGRNAYINLMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDA 292
           YNLLF AFLSRG N+YIN MYMETIRCLFRQMVNDGI+PDIF+LN MIKGYVLSLHVNDA
Sbjct: 181 YNLLFAAFLSRGNNSYINHMYMETIRCLFRQMVNDGIQPDIFSLNSMIKGYVLSLHVNDA 240

Query: 293 LRIFHQMGVVYSSLPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFXXXXXXXXXXXX 352
           LR+FHQM VVY  LPNSFSYDYLIHGLCAQ RT+NA+ELC++MK+KGFXXXXXXXXXXXX
Sbjct: 241 LRVFHQMDVVYKCLPNSFSYDYLIHGLCAQGRTNNAKELCDQMKQKGFXXXXXXXXXXXX 300

Query: 353 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQEKELVD 412
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    ++VD
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIVD 360

Query: 413 GHTYRKLLYVLEDDYGN 425
           GHTY+KLLYVLEDD+GN
Sbjct: 361 GHTYKKLLYVLEDDFGN 377

[Close]
BLAST of Carg21068 vs. TrEMBL
Match: tr|A0A061GUJ4|A0A061GUJ4_THECC (Tetratricopeptide repeat-like superfamily protein, putative OS=Theobroma cacao OX=3641 GN=TCM_041079 PE=4 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 7.2e-120
Identity = 303/422 (71.80%), Postives = 348/422 (82.46%), Query Frame = 0 

Query: 12  LRNSINQLCNSIPSNPHFVCLRRFSFHSWFLNTDHGNF---SHILRLSQIQ--NYPAPVL 71
           LRN  ++    I +NP F     +S  S +LN    +F     +L L+QI   +  +P  
Sbjct: 9   LRNFYHKTKIFISTNP-FHNFPYYSVFSSYLNPFIKDFKPKESLLGLTQIDPLSVISPTA 68

Query: 72  SFTKFCLN----FYSNSAPSRSFRRRASKRLKSRIKPKLNEAQFQHAISQIPPRFNSEEL 131
           +   FC N    FYS  APSRSFRRR +KRLK+  KP L++ +F+ A+SQ+ PRF +EEL
Sbjct: 69  NLHPFCYNSFTCFYSTRAPSRSFRRRINKRLKASSKPVLDQPKFEKAVSQLLPRFTAEEL 128

Query: 132 YNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLAVP 191
            NVI+++ DPLVC+ELFNWA QQ RFRHDVSTY ITIKKLG AKMYEEMD VVNQVLA+ 
Sbjct: 129 CNVITLEEDPLVCWELFNWAVQQPRFRHDVSTYHITIKKLGVAKMYEEMDVVVNQVLALR 188

Query: 192 SIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNKNLNCRPSIRTYNLLFTAFLSRGRNA 251
           + GSE LYNT+IYFFTEARKLTRA+NIFKHM+NN+ L+CRPSIRTYN+LFTA LSRGR++
Sbjct: 189 TFGSEPLYNTIIYFFTEARKLTRAVNIFKHMRNNRKLDCRPSIRTYNILFTAMLSRGRDS 248

Query: 252 YINLMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRIFHQMGVVYSSLP 311
           YIN MYMETIRCLFRQMVNDGIEPD+F+LN MIKGYVLSLHVNDALR+FHQMGVVY  LP
Sbjct: 249 YINHMYMETIRCLFRQMVNDGIEPDVFSLNSMIKGYVLSLHVNDALRVFHQMGVVYKCLP 308

Query: 312 NSFSYDYLIHGLCAQARTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXXXXXX 371
           NS+SYD+LI+GLCAQ RT+NARELCNEMK+ GFXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 309 NSYSYDFLIYGLCAQGRTNNARELCNEMKKNGFXXXXXXXXXXXXXXXXXXXXXXXXXXX 368

Query: 372 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQEKELVDGHTYRKLLYVLEDDY 425
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    +LVDGHTYRKLLY +EDD+
Sbjct: 369 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLVDGHTYRKLLYAMEDDF 428

[Close]
BLAST of Carg21068 vs. TrEMBL
Match: tr|A0A0D2RRL4|A0A0D2RRL4_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G012900 PE=4 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 9.4e-120
Identity = 290/386 (75.13%), Postives = 330/386 (85.49%), Query Frame = 0 

Query: 41  FLNTDHGNFSHILRLSQI--QNYPAPVLSFTKFCLNFYSNSAPSRSFRRRASKRLKSRIK 100
           F N  H  F+     +QI   +  +P     +F   FYS  APSRS+RRR +KRLK+  K
Sbjct: 38  FKNPQHSPFT----FTQINPSSITSPTSISHQFYTYFYSTKAPSRSYRRRVNKRLKASQK 97

Query: 101 PKLNEAQFQHAISQIPPRFNSEELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEIT 160
           P L++A+FQ  ISQ+PPRF ++ELYNVI+++ DPLVC+ELFNWA+QQ RF+H+VSTY IT
Sbjct: 98  PVLDQAKFQQVISQLPPRFTADELYNVITLEDDPLVCWELFNWAAQQPRFKHNVSTYHIT 157

Query: 161 IKKLGEAKMYEEMDNVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNKN 220
           IKKLG AKMYEEMD VVNQVLA+ S GSE LYNTMIYFF EARKLTRA+NIFKHM+NN+ 
Sbjct: 158 IKKLGVAKMYEEMDVVVNQVLALRSFGSEPLYNTMIYFFAEARKLTRAVNIFKHMRNNRK 217

Query: 221 LNCRPSIRTYNLLFTAFLSRGRNAYINLMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGY 280
            +CRPSIRTYN+LFTA LSRG+++YIN MYMETIRCLFRQMV+DGIEPD+FTLN MIKGY
Sbjct: 218 FDCRPSIRTYNILFTAMLSRGKDSYINHMYMETIRCLFRQMVDDGIEPDVFTLNSMIKGY 277

Query: 281 VLSLHVNDALRIFHQMGVVYSSLPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFXXX 340
           VLSLHVNDALR+FHQMGVVY  LPN+FSYDYLI+GLCAQ RT+NARELC+EMK  GF XX
Sbjct: 278 VLSLHVNDALRVFHQMGVVYKCLPNAFSYDYLIYGLCAQGRTNNARELCDEMKRNGFTXX 337

Query: 341 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 400
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 338 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 397

Query: 401 XVQEKELVDGHTYRKLLYVLEDDYGN 425
           X Q K+LVDGHTYRKLLY +ED YG+
Sbjct: 398 XXQSKDLVDGHTYRKLLYAMEDSYGD 419

The following BLAST results are available for this feature:
BLAST of Carg21068 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022965006.13.9e-202100.00pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucur... [more]
XP_023519586.11.8e-19998.83pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucur... [more]
XP_022970418.11.9e-19698.13pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucur... [more]
XP_008463631.14.2e-16486.68PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-... [more]
XP_022157934.14.2e-16487.56pentatricopeptide repeat-containing protein At2g27800, mitochondrial [Momordica ... [more]
BLAST of Carg21068 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G27800.13.4e-9965.77Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G27300.16.7e-5545.16pentatricopeptide (PPR) repeat-containing protein[more]
AT3G25210.15.7e-2227.47Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G16010.18.3e-1324.86Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT5G18475.14.5e-1123.36Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of Carg21068 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9ZUY1|PP173_ARATH6.1e-9865.77Pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Arabidop... [more]
sp|Q9LSF5|PP254_ARATH1.0e-2027.47Pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Arabidop... [more]
sp|Q9LW84|PP236_ARATH1.5e-1124.86Pentatricopeptide repeat-containing protein At3g16010 OS=Arabidopsis thaliana OX... [more]
sp|Q3E9F0|PP392_ARATH8.2e-1023.36Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana OX... [more]
sp|Q9MAG8|PPR79_ARATH1.2e-0826.23Putative pentatricopeptide repeat-containing protein At1g53330 OS=Arabidopsis th... [more]
BLAST of Carg21068 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CJQ6|A0A1S3CJQ6_CUCME2.8e-16486.68pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like OS=Cuc... [more]
tr|A0A0A0LS50|A0A0A0LS50_CUCSA3.1e-16385.98Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G086930 PE=4 SV=1[more]
tr|A0A2N9FRL4|A0A2N9FRL4_FAGSY6.3e-12480.11Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17745 PE=4 SV=1[more]
tr|A0A061GUJ4|A0A061GUJ4_THECC7.2e-12071.80Tetratricopeptide repeat-like superfamily protein, putative OS=Theobroma cacao O... [more]
tr|A0A0D2RRL4|A0A0D2RRL4_GOSRA9.4e-12075.13Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G012900 PE=4 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg21068-RACarg21068-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 88..244
e-value: 7.6E-19
score: 69.9
coord: 330..406
e-value: 9.2E-15
score: 56.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 245..318
e-value: 4.7E-14
score: 54.1
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 190..235
e-value: 1.8E-4
score: 21.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 189..217
e-value: 0.0018
score: 16.3
coord: 269..294
e-value: 0.0019
score: 16.2
coord: 340..373
e-value: 0.0017
score: 16.4
coord: 305..338
e-value: 5.0E-7
score: 27.5
coord: 375..405
e-value: 0.0016
score: 16.5
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 371..399
e-value: 5.0E-7
score: 29.2
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 302..350
e-value: 6.3E-11
score: 42.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 269..294
e-value: 0.015
score: 15.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 224..266
score: 5.601
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 373..407
score: 9.635
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 151..181
score: 5.557
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 338..372
score: 9.525
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 303..337
score: 11.871
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 267..297
score: 7.377
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 186..216
score: 7.783
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 12..420
NoneNo IPR availablePANTHERPTHR24015:SF1017PENTATRICOPEPTIDE PPR REPEAT-CONTAINING PROTEINcoord: 12..420