Cla005049 (gene) Watermelon (97103) v1

Overview
NameCla005049
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPentatricopeptide repeat-containing protein (AHRD V1 ***- D7LJQ6_ARALL); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
LocationChr3 : 2553160 .. 2554362 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACCTCCTCCTTCGCCTTTGCATTCAGCATTCATGGCGGTTGAATACTCATCATGGTAACCTCAGCCATTTTCTCCCTCTATCTCAAATCCAAAGCTATCCAGCTCCCAACCTCTCTTTCACGAAATTTTGTTTGAATTTCTACTCCAATAGGGCACCTTCAAGATCCTTCAGGAGGAGAGCGAGTAAGAGGTTGAAATCCAGCCTCAAACCTACACTGGACGAAACCCAATTTCAGTTGGCAGTTTCTCAAATCCCTCCAAGGTTTACCTCCGAAGAACTTTGTAACGTCATTTCTCTCCAGGGAAATCCTTTGGTGTGTTTTGAGCTGTTCAACTGGGCTTCACAACAGCCTCGTTTCAGACATGATGTTTCCACTTATCAGATTACAATTAAGAAGCTGGGTGAGGCGAAAATGTATGAAGAAATGGATCATGTTGTGAATCAGGTGCTTGCTGTTCCTTCTATTGGTTCTGAGACTCTTTACAATACTATGATCTATTTTTTCACTGAGGCAAGGAAGTTGACTAGAGCTATCAATATATTTAAGCATATGCAGAACAACAGAAACTTGAACTGTAGGCCTTCAATTAGAACATATAATCTACTTTTTACTGCATTCTTGAGTCGTGGTCGTAATGCTTATATAAATCACATGTATATGGAGACTATTAGATGTCTCTTCAGACAGATGGTGAATGATGATGGGATTGAACCTGACATATTTACTTTGAACTGTATGATAAAAGGGTATGTGCTTTCCCTGCATATTAATGATGCTCTTAGGATCTTTCACCAAATGGGTGTTGTGTATAGCTGCTTACCAAATTCATTTTCCTATGACTATTTGATTCACGGGTTATGCGCCCAAGGGCGAACAGATAATGCAAGGGAGTTGTGCAAGGAAATGAAGGAAAAGGGGTTTATGCCTAGTAGTATATCATATAATTCAATTGTGAATGCTATGGCTCTCAATGGAGAGGTTGAAGAAGCAGTGAATTATTTGTGGGAGATGATTGATAGTAGAAGATCTCCTGATTTTATTACATATAGGACTGTATTGGATGAGCTGTGTAGACAAGGGAGGGTCGGAGAAGCGACGAGTTTGTTGAGGGAATTGCAAGAGAAGGATCTTGTGGATGGTCATACATATAGGAAACTTCTCTATGTGCTTGAAGATGATTATGGAAATCTAAATTGA

mRNA sequence

ATGAACCTCCTCCTTCGCCTTTGCATTCAGCATTCATGGCGGTTGAATACTCATCATGGTAACCTCAGCCATTTTCTCCCTCTATCTCAAATCCAAAGCTATCCAGCTCCCAACCTCTCTTTCACGAAATTTTGTTTGAATTTCTACTCCAATAGGGCACCTTCAAGATCCTTCAGGAGGAGAGCGAGTAAGAGGTTGAAATCCAGCCTCAAACCTACACTGGACGAAACCCAATTTCAGTTGGCAGTTTCTCAAATCCCTCCAAGGTTTACCTCCGAAGAACTTTGTAACGTCATTTCTCTCCAGGGAAATCCTTTGGTGTGTTTTGAGCTGTTCAACTGGGCTTCACAACAGCCTCGTTTCAGACATGATGTTTCCACTTATCAGATTACAATTAAGAAGCTGGGTGAGGCGAAAATGTATGAAGAAATGGATCATGTTGTGAATCAGGTGCTTGCTGTTCCTTCTATTGGTTCTGAGACTCTTTACAATACTATGATCTATTTTTTCACTGAGGCAAGGAAGTTGACTAGAGCTATCAATATATTTAAGCATATGCAGAACAACAGAAACTTGAACTGTAGGCCTTCAATTAGAACATATAATCTACTTTTTACTGCATTCTTGAGTCGTGGTCGTAATGCTTATATAAATCACATGTATATGGAGACTATTAGATGTCTCTTCAGACAGATGGTGAATGATGATGGGATTGAACCTGACATATTTACTTTGAACTGTATGATAAAAGGGTATGTGCTTTCCCTGCATATTAATGATGCTCTTAGGATCTTTCACCAAATGGGTGTTGTGTATAGCTGCTTACCAAATTCATTTTCCTATGACTATTTGATTCACGGGTTATGCGCCCAAGGGCGAACAGATAATGCAAGGGAGTTGTGCAAGGAAATGAAGGAAAAGGGGTTTATGCCTAGTAGTATATCATATAATTCAATTGTGAATGCTATGGCTCTCAATGGAGAGGTTGAAGAAGCAGTGAATTATTTGTGGGAGATGATTGATAGTAGAAGATCTCCTGATTTTATTACATATAGGACTGTATTGGATGAGCTGTGTAGACAAGGGAGGGTCGGAGAAGCGACGAGTTTGTTGAGGGAATTGCAAGAGAAGGATCTTGTGGATGGTCATACATATAGGAAACTTCTCTATGTGCTTGAAGATGATTATGGAAATCTAAATTGA

Coding sequence (CDS)

ATGAACCTCCTCCTTCGCCTTTGCATTCAGCATTCATGGCGGTTGAATACTCATCATGGTAACCTCAGCCATTTTCTCCCTCTATCTCAAATCCAAAGCTATCCAGCTCCCAACCTCTCTTTCACGAAATTTTGTTTGAATTTCTACTCCAATAGGGCACCTTCAAGATCCTTCAGGAGGAGAGCGAGTAAGAGGTTGAAATCCAGCCTCAAACCTACACTGGACGAAACCCAATTTCAGTTGGCAGTTTCTCAAATCCCTCCAAGGTTTACCTCCGAAGAACTTTGTAACGTCATTTCTCTCCAGGGAAATCCTTTGGTGTGTTTTGAGCTGTTCAACTGGGCTTCACAACAGCCTCGTTTCAGACATGATGTTTCCACTTATCAGATTACAATTAAGAAGCTGGGTGAGGCGAAAATGTATGAAGAAATGGATCATGTTGTGAATCAGGTGCTTGCTGTTCCTTCTATTGGTTCTGAGACTCTTTACAATACTATGATCTATTTTTTCACTGAGGCAAGGAAGTTGACTAGAGCTATCAATATATTTAAGCATATGCAGAACAACAGAAACTTGAACTGTAGGCCTTCAATTAGAACATATAATCTACTTTTTACTGCATTCTTGAGTCGTGGTCGTAATGCTTATATAAATCACATGTATATGGAGACTATTAGATGTCTCTTCAGACAGATGGTGAATGATGATGGGATTGAACCTGACATATTTACTTTGAACTGTATGATAAAAGGGTATGTGCTTTCCCTGCATATTAATGATGCTCTTAGGATCTTTCACCAAATGGGTGTTGTGTATAGCTGCTTACCAAATTCATTTTCCTATGACTATTTGATTCACGGGTTATGCGCCCAAGGGCGAACAGATAATGCAAGGGAGTTGTGCAAGGAAATGAAGGAAAAGGGGTTTATGCCTAGTAGTATATCATATAATTCAATTGTGAATGCTATGGCTCTCAATGGAGAGGTTGAAGAAGCAGTGAATTATTTGTGGGAGATGATTGATAGTAGAAGATCTCCTGATTTTATTACATATAGGACTGTATTGGATGAGCTGTGTAGACAAGGGAGGGTCGGAGAAGCGACGAGTTTGTTGAGGGAATTGCAAGAGAAGGATCTTGTGGATGGTCATACATATAGGAAACTTCTCTATGTGCTTGAAGATGATTATGGAAATCTAAATTGA

Protein sequence

MNLLLRLCIQHSWRLNTHHGNLSHFLPLSQIQSYPAPNLSFTKFCLNFYSNRAPSRSFRRRASKRLKSSLKPTLDETQFQLAVSQIPPRFTSEELCNVISLQGNPLVCFELFNWASQQPRFRHDVSTYQITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMIKGYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGFMPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVGEATSLLRELQEKDLVDGHTYRKLLYVLEDDYGNLN
Homology
[Close]
BLAST of Cla005049 vs. Swiss-Prot
Match: PP173_ARATH (Pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Arabidopsis thaliana GN=At2g27800 PE=3 SV=2)

HSP 1 Score: 463.4 bits (1191), Expect = 2.5e-129
Identity = 221/347 (63.69%), Postives = 276/347 (79.54%), Query Frame = 1 

Query: 49  YSNRAPSRSFRRRASKRLKSSLKPTLDETQFQLAVSQIPPRFTSEELCNVISLQGNPLVC 108
           YS   P+RS RRR S R KSS KP L+ ++F   +S++PPRFT EEL + I+L+ +P +C
Sbjct: 96  YSTSVPTRSLRRRISNRKKSSAKPILNVSKFHETISKLPPRFTPEELADAITLEEDPFLC 155

Query: 109 FELFNWASQQPRFRHDVSTYQITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIY 168
           F LFNWASQQPRF H+  +Y I I+KLG AKMY+EMD +VNQVL+V  IG+E LYN++I+
Sbjct: 156 FHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIF 215

Query: 169 FFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCL 228
           +FT+A KL RA+NIF+HM  ++NL CRP+IRTY++LF A L RG N+YINH+YMET+R L
Sbjct: 216 YFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSL 275

Query: 229 FRQMVNDDGIEPDIFTLNCMIKGYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGL 288
           FRQMV D GIEPD+F LNC++KGYVLSLH+NDALRIFHQM VVY C PNSF+YDYLIHGL
Sbjct: 276 FRQMV-DSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGL 335

Query: 289 CAQGRTDNARELCKEMKEKGFMPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDF 348
           CAQGRT NAREL  EMK KGF+P+  SYNS+VNA AL+GE+++AV  LWEMI++ R  DF
Sbjct: 336 CAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDF 395

Query: 349 ITYRTVLDELCRQGRVGEATSLLRELQEKDLVDGHTYRKLLYVLEDD 396
           I+YRT++DE CR+G+  EAT LL  L+EK LVD  +Y KL+ VL  D
Sbjct: 396 ISYRTLVDESCRKGKYDEATRLLEMLREKQLVDRDSYDKLVNVLHKD 441

[Close]
BLAST of Cla005049 vs. Swiss-Prot
Match: PP254_ARATH (Pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Arabidopsis thaliana GN=At3g25210 PE=2 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 5.4e-47
Identity = 110/354 (31.07%), Postives = 191/354 (53.95%), Query Frame = 1 

Query: 38  NLSFTKFCLNFYSNRAPSRSFRRRASKRLKSSLKPTLDETQFQLAVSQIPPRFTSEELCN 97
           +LSF+    +  S+ +PSR   R            T  ETQF+  +  + P FT+ ++  
Sbjct: 33  SLSFSSVSSSPESHTSPSRIRTR------------TPLETQFETWIQNLKPGFTNSDVVI 92

Query: 98  VISLQGNPLVCFELFNWASQQPRFRHDVSTYQITIKKLGEAKMYEEMDHVVNQVLAVPSI 157
            +  Q +P +  ++F W +QQ  ++H+   Y   IK+    K    ++ ++ +V+A    
Sbjct: 93  ALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTMIKQAITGKRNNFVETLIEEVIAGACE 152

Query: 158 GSETLYNTMIYFFTEARKL-TRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAY 217
            S  LYN +I F    + L  RA +++  M   R+ + +P + TY LL ++ L R     
Sbjct: 153 MSVPLYNCIIRFCCGRKFLFNRAFDVYNKML--RSDDSKPDLETYTLLLSSLLKRFNKLN 212

Query: 218 INHMYMETIRCLFRQMVNDDGIEPDIFTLNCMIKGYVLSLHINDALRIFHQMGVVYSCLP 277
           + ++Y+  +R L +QM   +G+ PD F LN +IK Y   L +++A+R+F +M + Y   P
Sbjct: 213 VCYVYLHAVRSLTKQM-KSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMAL-YGSEP 272

Query: 278 NSFSYDYLIHGLCAQGRTDNARELCKEMKEKGFMPSSISYNSIVNAMALNGEVEEAVNYL 337
           N+++Y YL+ G+C +GR        KEM+ KG +P+   Y  ++ ++++   ++EAV  +
Sbjct: 273 NAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVV 332

Query: 338 WEMIDSRRSPDFITYRTVLDELCRQGRVGEATSLLRELQEKDLVDG-HTYRKLL 390
           ++M+ +  SPD +TY TVL ELCR GR  EA  ++ E +++D V G   YR L+
Sbjct: 333 YDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLM 370

[Close]
BLAST of Cla005049 vs. Swiss-Prot
Match: PPR12_ARATH (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 7.6e-25
Identity = 76/248 (30.65%), Postives = 119/248 (47.98%), Query Frame = 1 

Query: 132 IKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRN 191
           I KL EA+  E    ++ Q +   ++    +Y T+I  F +   +  A   F  M +   
Sbjct: 329 ICKLAEAE--EAFSEMIRQGILPDTV----VYTTLIDGFCKRGDIRAASKFFYEMHSR-- 388

Query: 192 LNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMIKG 251
            +  P + TY  + + F   G       ++ E   C         G+EPD  T   +I G
Sbjct: 389 -DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF-C--------KGLEPDSVTFTELING 448

Query: 252 YVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGFMP 311
           Y  + H+ DA R+ + M +   C PN  +Y  LI GLC +G  D+A EL  EM + G  P
Sbjct: 449 YCKAGHMKDAFRVHNHM-IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 508

Query: 312 SSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVGEATSLL 371
           +  +YNSIVN +  +G +EEAV  + E   +  + D +TY T++D  C+ G + +A  +L
Sbjct: 509 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 557

Query: 372 RELQEKDL 380
           +E+  K L
Sbjct: 569 KEMLGKGL 557


HSP 2 Score: 74.3 bits (181), Expect = 3.3e-12
Identity = 58/251 (23.11%), Postives = 107/251 (42.63%), Query Frame = 1 

Query: 124 DVSTYQITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIF 183
           +V++Y I I  + +    +E  H++  +           Y+T++  +    +L +   ++
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDK---VW 304

Query: 184 KHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIF 243
           K ++  +    +P+   Y  +        + A     + E IR          GI PD  
Sbjct: 305 KLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR---------QGILPDTV 364

Query: 244 TLNCMIKGYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELCKE 303
               +I G+     I  A + F++M       P+  +Y  +I G C  G    A +L  E
Sbjct: 365 VYTTLIDGFCKRGDIRAASKFFYEMHS-RDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 424

Query: 304 MKEKGFMPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGR 363
           M  KG  P S+++  ++N     G +++A      MI +  SP+ +TY T++D LC++G 
Sbjct: 425 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 482

Query: 364 VGEATSLLREL 375
           +  A  LL E+
Sbjct: 485 LDSANELLHEM 482


HSP 3 Score: 72.8 bits (177), Expect = 9.7e-12
Identity = 40/171 (23.39%), Postives = 79/171 (46.20%), Query Frame = 1 

Query: 214 NAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMIKGYVLSLHINDALRIFHQMGVVYS 273
           N Y    +M+    +   M+   G  P++ T   +I G      ++ A  + H+M  +  
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI-G 488

Query: 274 CLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGFMPSSISYNSIVNAMALNGEVEEAV 333
             PN F+Y+ +++GLC  G  + A +L  E +  G    +++Y ++++A   +GE+++A 
Sbjct: 489 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 548

Query: 334 NYLWEMIDSRRSPDFITYRTVLDELCRQGRVGEATSLLRELQEKDLVDGHT 385
             L EM+     P  +T+  +++  C  G + +   LL  +  K +    T
Sbjct: 549 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597


HSP 4 Score: 65.9 bits (159), Expect = 1.2e-09
Identity = 35/115 (30.43%), Postives = 56/115 (48.70%), Query Frame = 1 

Query: 276 PNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGFMPSSISYNSIVNAMALNGEVEEAVNY 335
           P+  SY  +++G C  G  D   +L + MK KG  P+S  Y SI+  +    ++ EA   
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338

Query: 336 LWEMIDSRRSPDFITYRTVLDELCRQGRVGEATSLLRELQEKDLV-DGHTYRKLL 390
             EMI     PD + Y T++D  C++G +  A+    E+  +D+  D  TY  ++
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393


HSP 5 Score: 42.0 bits (97), Expect = 1.8e-02
Identity = 25/87 (28.74%), Postives = 43/87 (49.43%), Query Frame = 1 

Query: 293 RTDNARELCKEMKEKGFMPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYR 352
           +T  A  + +E  E G   +  SYN +++ +   G ++EA + L  M     +PD I+Y 
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 285

Query: 353 TVLDELCRQGRVGEATSLLRELQEKDL 380
           TV++  CR G + +   L+  ++ K L
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGL 312

[Close]
BLAST of Cla005049 vs. Swiss-Prot
Match: PPR28_ARATH (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 6.5e-24
Identity = 69/228 (30.26%), Postives = 113/228 (49.56%), Query Frame = 1 

Query: 163 YNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYM 222
           YN ++    +  +L  AI     M ++    C+P++ T+N++  +  S GR      +  
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSS---GCQPNVITHNIILRSMCSTGRWMDAEKLLA 336

Query: 223 ETIRCLFRQMVNDDGIEPDIFTLNCMIKGYVLSLHINDALRIFHQMGVVYSCLPNSFSYD 282
           + +R          G  P + T N +I        +  A+ I  +M   + C PNS SY+
Sbjct: 337 DMLR---------KGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQ-HGCQPNSLSYN 396

Query: 283 YLIHGLCAQGRTDNARELCKEMKEKGFMPSSISYNSIVNAMALNGEVEEAVNYLWEMIDS 342
            L+HG C + + D A E  + M  +G  P  ++YN+++ A+  +G+VE+AV  L ++   
Sbjct: 397 PLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 456

Query: 343 RRSPDFITYRTVLDELCRQGRVGEATSLLRELQEKDL-VDGHTYRKLL 390
             SP  ITY TV+D L + G+ G+A  LL E++ KDL  D  TY  L+
Sbjct: 457 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491


HSP 2 Score: 94.4 bits (233), Expect = 3.1e-18
Identity = 62/254 (24.41%), Postives = 118/254 (46.46%), Query Frame = 1 

Query: 124 DVSTYQITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIF 183
           DV TY   ++ L ++   ++   V++++L          Y  +I        +  A+ + 
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLL 262

Query: 184 KHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIF 243
             M   R+  C P + TYN+L       GR         E I+  F   +   G +P++ 
Sbjct: 263 DEM---RDRGCTPDVVTYNVLVNGICKEGR-------LDEAIK--FLNDMPSSGCQPNVI 322

Query: 244 TLNCMIKGYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELCKE 303
           T N +++    +    DA ++   M +     P+  +++ LI+ LC +G    A ++ ++
Sbjct: 323 THNIILRSMCSTGRWMDAEKLLADM-LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEK 382

Query: 304 MKEKGFMPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGR 363
           M + G  P+S+SYN +++      +++ A+ YL  M+     PD +TY T+L  LC+ G+
Sbjct: 383 MPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 442

Query: 364 VGEATSLLRELQEK 378
           V +A  +L +L  K
Sbjct: 443 VEDAVEILNQLSSK 443


HSP 3 Score: 94.0 bits (232), Expect = 4.1e-18
Identity = 66/273 (24.18%), Postives = 126/273 (46.15%), Query Frame = 1 

Query: 124 DVSTYQITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIF 183
           DV TY + I    +A        V++++   P +     YNT++    ++ KL +A+ + 
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMSVSPDV---VTYNTILRSLCDSGKLKQAMEVL 230

Query: 184 KHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIF 243
             M      +C P + TY +L  A     R++ + H        L  +M  D G  PD+ 
Sbjct: 231 DRMLQR---DCYPDVITYTILIEATC---RDSGVGHAMK-----LLDEM-RDRGCTPDVV 290

Query: 244 TLNCMIKGYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELCKE 303
           T N ++ G      +++A++  + M     C PN  +++ ++  +C+ GR  +A +L  +
Sbjct: 291 TYNVLVNGICKEGRLDEAIKFLNDMPSS-GCQPNVITHNIILRSMCSTGRWMDAEKLLAD 350

Query: 304 MKEKGFMPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGR 363
           M  KGF PS +++N ++N +   G +  A++ L +M      P+ ++Y  +L   C++ +
Sbjct: 351 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 410

Query: 364 VGEATSLLRELQEKDLV-DGHTYRKLLYVLEDD 396
           +  A   L  +  +    D  TY  +L  L  D
Sbjct: 411 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKD 427


HSP 4 Score: 89.7 bits (221), Expect = 7.6e-17
Identity = 63/248 (25.40%), Postives = 113/248 (45.56%), Query Frame = 1 

Query: 124 DVSTYQITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIF 183
           +V T+ I ++ +     + + + ++  +L      S   +N +I F      L RAI+I 
Sbjct: 308 NVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDIL 367

Query: 184 KHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIF 243
           + M  +    C+P+  +YN L   F    +        M+       +MV+  G  PDI 
Sbjct: 368 EKMPQH---GCQPNSLSYNPLLHGFCKEKK--------MDRAIEYLERMVSR-GCYPDIV 427

Query: 244 TLNCMIKGYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELCKE 303
           T N M+        + DA+ I +Q+     C P   +Y+ +I GL   G+T  A +L  E
Sbjct: 428 TYNTMLTALCKDGKVEDAVEILNQLSSK-GCSPVLITYNTVIDGLAKAGKTGKAIKLLDE 487

Query: 304 MKEKGFMPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGR 363
           M+ K   P +I+Y+S+V  ++  G+V+EA+ +  E       P+ +T+ +++  LC+  +
Sbjct: 488 MRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQ 542

Query: 364 VGEATSLL 372
              A   L
Sbjct: 548 TDRAIDFL 542


HSP 5 Score: 83.2 bits (204), Expect = 7.2e-15
Identity = 59/252 (23.41%), Postives = 112/252 (44.44%), Query Frame = 1 

Query: 124 DVSTYQITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIF 183
           DV TY + +  + +    +E    +N +   PS G +    T            R ++  
Sbjct: 273 DVVTYNVLVNGICKEGRLDEAIKFLNDM---PSSGCQPNVITHNIILRSMCSTGRWMDAE 332

Query: 184 KHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIF 243
           K + +       PS+ T+N+L      +G       +    I  L  + +   G +P+  
Sbjct: 333 KLLADMLRKGFSPSVVTFNILINFLCRKG-------LLGRAIDIL--EKMPQHGCQPNSL 392

Query: 244 TLNCMIKGYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELCKE 303
           + N ++ G+     ++ A+    +M V   C P+  +Y+ ++  LC  G+ ++A E+  +
Sbjct: 393 SYNPLLHGFCKEKKMDRAIEYLERM-VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 452

Query: 304 MKEKGFMPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGR 363
           +  KG  P  I+YN++++ +A  G+  +A+  L EM      PD ITY +++  L R+G+
Sbjct: 453 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 511

Query: 364 VGEATSLLRELQ 376
           V EA     E +
Sbjct: 513 VDEAIKFFHEFE 511


HSP 6 Score: 61.6 bits (148), Expect = 2.2e-08
Identity = 38/129 (29.46%), Postives = 63/129 (48.84%), Query Frame = 1 

Query: 270 VVYSCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGFMPSSISYNSIVNAMALNGEV 329
           V +  +P+      LI G C  G+T  A ++ + ++  G +P  I+YN +++     GE+
Sbjct: 129 VYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEI 188

Query: 330 EEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVGEATSLLRELQEKDLV-DGHTYRKL 389
             A++ L  M     SPD +TY T+L  LC  G++ +A  +L  + ++D   D  TY  L
Sbjct: 189 NNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTIL 248

Query: 390 LYVLEDDYG 398
           +     D G
Sbjct: 249 IEATCRDSG 254


HSP 7 Score: 57.0 bits (136), Expect = 5.5e-07
Identity = 52/190 (27.37%), Postives = 76/190 (40.00%), Query Frame = 1 

Query: 124 DVSTYQITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIF 183
           D+ TY   +  L +    E+   ++NQ+ +         YNT+I    +A K  +AI + 
Sbjct: 413 DIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLL 472

Query: 184 KHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIF 243
             M   R  + +P   TY+ L       G+       + E     F +M    GI P+  
Sbjct: 473 DEM---RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE-----FERM----GIRPNAV 532

Query: 244 TLNCMIKGYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELCKE 303
           T N ++ G   S   + A+     M +   C PN  SY  LI GL  +G    A EL  E
Sbjct: 533 TFNSIMLGLCKSRQTDRAIDFLVFM-INRGCKPNETSYTILIEGLAYEGMAKEALELLNE 589

Query: 304 MKEKGFMPSS 314
           +  KG M  S
Sbjct: 593 LCNKGLMKKS 589


HSP 8 Score: 38.1 bits (87), Expect = 2.6e-01
Identity = 29/128 (22.66%), Postives = 51/128 (39.84%), Query Frame = 1 

Query: 272 YSCLPNSFSYDYL-----IHGLCAQGRTDNARELCKEMKEKGFMPSSISYNSIVNAMALN 331
           YS + +SF+ + +     +  +   G  +   +  + M   G +P  I   +++      
Sbjct: 91  YSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRL 150

Query: 332 GEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVGEATSLLRELQEKDLVDGHTYR 391
           G+  +A   L  +  S   PD ITY  ++   C+ G +  A S+L  +      D  TY 
Sbjct: 151 GKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSP--DVVTYN 210

Query: 392 KLLYVLED 395
            +L  L D
Sbjct: 211 TILRSLCD 216

[Close]
BLAST of Cla005049 vs. Swiss-Prot
Match: PP298_ARATH (Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidopsis thaliana GN=At4g01400 PE=2 SV=2)

HSP 1 Score: 112.8 bits (281), Expect = 8.4e-24
Identity = 77/280 (27.50%), Postives = 142/280 (50.71%), Query Frame = 1 

Query: 98  VISLQGNPLVCFELFNWASQQPRFRHDVSTYQITIKKLGEAKMYEEMDHVV--NQVLAVP 157
           +I+ Q +PL+  E+F++ASQQP FRH  S++ I I KLG  + +  +D V+  ++    P
Sbjct: 57  LIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYP 116

Query: 158 SIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLS-RGRN 217
             G   ++  +I  + EA+   + ++ F  M      N  P  +  N +    +S RG  
Sbjct: 117 LTGE--IFTYLIKVYAEAKLPEKVLSTFYKMLE---FNFTPQPKHLNRILDVLVSHRG-- 176

Query: 218 AYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMIKGYVLSLHINDALRIFHQMGVVYSC 277
                 Y++    LF+      G+ P+  + N +++ + L+  ++ A ++F +M +    
Sbjct: 177 ------YLQKAFELFKSS-RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKM-LERDV 236

Query: 278 LPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGFMPSSISYNSIVNAMALNGEVEEAVN 337
           +P+  SY  LI G C +G+ + A EL  +M  KGF+P  +SY +++N++    ++ EA  
Sbjct: 237 VPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYK 296

Query: 338 YLWEMIDSRRSPDFITYRTVLDELCRQGRVGEATSLLREL 375
            L  M     +PD + Y T++   CR+ R  +A  +L ++
Sbjct: 297 LLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDM 321


HSP 2 Score: 84.7 bits (208), Expect = 2.5e-15
Identity = 81/316 (25.63%), Postives = 139/316 (43.99%), Query Frame = 1 

Query: 98  VISLQGNPLVCFELFNWASQQ-------------------PRF---------RHDVSTYQ 157
           +I+ Q +PL+  E+F++ASQQ                    R+         +H  S Y 
Sbjct: 57  LIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYP 116

Query: 158 IT-------IKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARK-LTRAIN 217
           +T       IK   EAK+ E++     ++L           N ++      R  L +A  
Sbjct: 117 LTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFE 176

Query: 218 IFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPD 277
           +FK   ++R     P+ R+YNLL  AF     N  ++  Y      LF +M+  D + PD
Sbjct: 177 LFK---SSRLHGVMPNTRSYNLLMQAFCL---NDDLSIAYQ-----LFGKMLERD-VVPD 236

Query: 278 IFTLNCMIKGYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELC 337
           + +   +I+G+     +N A+ +   M +    +P+  SY  L++ LC + +   A +L 
Sbjct: 237 VDSYKILIQGFCRKGQVNGAMELLDDM-LNKGFVPDRLSYTTLLNSLCRKTQLREAYKLL 296

Query: 338 KEMKEKGFMPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQ 378
             MK KG  P  + YN+++          +A   L +M+ +  SP+ ++YRT++  LC Q
Sbjct: 297 CRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQ 356


HSP 3 Score: 70.1 bits (170), Expect = 6.3e-11
Identity = 53/209 (25.36%), Postives = 92/209 (44.02%), Query Frame = 1 

Query: 163 YNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYM 222
           YN ++  F     L+ A  +F  M      +  P + +Y +L   F  +G+   +N   M
Sbjct: 193 YNLLMQAFCLNDDLSIAYQLFGKMLER---DVVPDVDSYKILIQGFCRKGQ---VNGA-M 252

Query: 223 ETIRCLFRQMVNDDGIEPDIFTLNCMIKGYVLSLHINDALRIFHQMGVVYSCLPNSFSYD 282
           E    L   M+N  G  PD  +   ++        + +A ++  +M +   C P+   Y+
Sbjct: 253 E----LLDDMLNK-GFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLK-GCNPDLVHYN 312

Query: 283 YLIHGLCAQGRTDNARELCKEMKEKGFMPSSISYNSIVNAMALNGEVEEAVNYLWEMIDS 342
            +I G C + R  +AR++  +M   G  P+S+SY +++  +   G  +E   YL EMI  
Sbjct: 313 TMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISK 372

Query: 343 RRSPDFITYRTVLDELCRQGRVGEATSLL 372
             SP F     ++   C  G+V EA  ++
Sbjct: 373 GFSPHFSVSNCLVKGFCSFGKVEEACDVV 388


HSP 4 Score: 68.2 bits (165), Expect = 2.4e-10
Identity = 61/231 (26.41%), Postives = 94/231 (40.69%), Query Frame = 1 

Query: 154 VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGR 213
           VP + S   Y  +I  F    ++  A+ +   M N   +   P   +Y  L  +   + +
Sbjct: 222 VPDVDS---YKILIQGFCRKGQVNGAMELLDDMLNKGFV---PDRLSYTTLLNSLCRKTQ 281

Query: 214 NAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMIKGYVLSLHINDALRIFHQMGVVYS 273
                    E  + L R  +   G  PD+   N MI G+       DA ++   M +   
Sbjct: 282 -------LREAYKLLCRMKLK--GCNPDLVHYNTMILGFCREDRAMDARKVLDDM-LSNG 341

Query: 274 CLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGFMPSSISYNSIVNAMALNGEVEEAV 333
           C PNS SY  LI GLC QG  D  ++  +EM  KGF P     N +V      G+VEEA 
Sbjct: 342 CSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEAC 401

Query: 334 NYLWEMIDSRRSPDFITYRTVLDELCRQGRVGEATSLLRELQEKDLVDGHT 385
           + +  ++ +  +    T+  V+  +C +    E   L  E   K+ + G T
Sbjct: 402 DVVEVVMKNGETLHSDTWEMVIPLICNEDE-SEKIKLFLEDAVKEEITGDT 435

[Close]
BLAST of Cla005049 vs. TrEMBL
Match: A0A0A0LS50_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G086930 PE=4 SV=1)

HSP 1 Score: 715.7 bits (1846), Expect = 3.2e-203
Identity = 349/391 (89.26%), Postives = 368/391 (94.12%), Query Frame = 1 

Query: 11  HSWRLN-THHGNLSHFLPLSQIQSYPAPNLSFTKFCLNFYSNRAPSRSFRRRASKRLKSS 70
           HSW LN THH NL HFL +SQI  Y  PNLSFT F L FYS  APSRSFR+RA+KRLKSS
Sbjct: 38  HSWWLNNTHHYNLPHFLRVSQIHPYSGPNLSFTNFLLKFYSRAAPSRSFRKRANKRLKSS 97

Query: 71  LKPTLDETQFQLAVSQIPPRFTSEELCNVISLQGNPLVCFELFNWASQQPRFRHDVSTYQ 130
           LKP LDETQFQLAVS+IPPRFTSEELCNVISLQ +PLVCFELFNWASQQPRFRHD S+Y+
Sbjct: 98  LKPKLDETQFQLAVSKIPPRFTSEELCNVISLQRDPLVCFELFNWASQQPRFRHDDSSYE 157

Query: 131 ITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN 190
           ITIKKLGEAKMYEEMDHVVNQ LAV SIGSETLYNTMIYFFTEARKLTRA+NIFKHMQNN
Sbjct: 158 ITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYFFTEARKLTRAVNIFKHMQNN 217

Query: 191 RNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMI 250
           RNLNCRPSIRTYNLLFTAFLSRGRN YINHMYMETIRCLFRQMVNDDGIEPDIF+LNCMI
Sbjct: 218 RNLNCRPSIRTYNLLFTAFLSRGRNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMI 277

Query: 251 KGYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGF 310
           KGYVLSLH+NDALRIFHQMGVVYSCLPNS+S+DYLIHGLCAQ RTDNA+ELC EMKEKGF
Sbjct: 278 KGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGF 337

Query: 311 MPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVGEATS 370
           +PSSISYNSIVNA+ALNGEVE+AVNYLWEMID+RRSPDFITY+TVLDELCRQG+V EATS
Sbjct: 338 VPSSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATS 397

Query: 371 LLRELQEKDLVDGHTYRKLLYVLEDDYGNLN 401
           LLRELQEKDLVDGHTYRKLLYVLEDDYGNLN
Sbjct: 398 LLRELQEKDLVDGHTYRKLLYVLEDDYGNLN 428

[Close]
BLAST of Cla005049 vs. TrEMBL
Match: A0A061GUJ4_THECC (Tetratricopeptide repeat-like superfamily protein, putative OS=Theobroma cacao GN=TCM_041079 PE=4 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 1.9e-163
Identity = 286/381 (75.07%), Postives = 333/381 (87.40%), Query Frame = 1 

Query: 22  LSHFLPLSQIQSYPAPNLSFTKFCLN----FYSNRAPSRSFRRRASKRLKSSLKPTLDET 81
           L+   PLS I    +P  +   FC N    FYS RAPSRSFRRR +KRLK+S KP LD+ 
Sbjct: 54  LTQIDPLSVI----SPTANLHPFCYNSFTCFYSTRAPSRSFRRRINKRLKASSKPVLDQP 113

Query: 82  QFQLAVSQIPPRFTSEELCNVISLQGNPLVCFELFNWASQQPRFRHDVSTYQITIKKLGE 141
           +F+ AVSQ+ PRFT+EELCNVI+L+ +PLVC+ELFNWA QQPRFRHDVSTY ITIKKLG 
Sbjct: 114 KFEKAVSQLLPRFTAEELCNVITLEEDPLVCWELFNWAVQQPRFRHDVSTYHITIKKLGV 173

Query: 142 AKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPS 201
           AKMYEEMD VVNQVLA+ + GSE LYNT+IYFFTEARKLTRA+NIFKHM+NNR L+CRPS
Sbjct: 174 AKMYEEMDVVVNQVLALRTFGSEPLYNTIIYFFTEARKLTRAVNIFKHMRNNRKLDCRPS 233

Query: 202 IRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMIKGYVLSLH 261
           IRTYN+LFTA LSRGR++YINHMYMETIRCLFRQMVN DGIEPD+F+LN MIKGYVLSLH
Sbjct: 234 IRTYNILFTAMLSRGRDSYINHMYMETIRCLFRQMVN-DGIEPDVFSLNSMIKGYVLSLH 293

Query: 262 INDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGFMPSSISYN 321
           +NDALR+FHQMGVVY CLPNS+SYD+LI+GLCAQGRT+NARELC EMK+ GF+PSS SYN
Sbjct: 294 VNDALRVFHQMGVVYKCLPNSYSYDFLIYGLCAQGRTNNARELCNEMKKNGFVPSSKSYN 353

Query: 322 SIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVGEATSLLRELQEK 381
           S+VNA+AL+GEVEEA++YL EMI+ R+S DFITYRT+LDE+CR+GR  EAT LL+ELQ+K
Sbjct: 354 SLVNALALSGEVEEALHYLREMIEKRKSADFITYRTILDEICRRGRAEEATGLLKELQDK 413

Query: 382 DLVDGHTYRKLLYVLEDDYGN 399
           DLVDGHTYRKLLY +EDD+GN
Sbjct: 414 DLVDGHTYRKLLYAMEDDFGN 429

[Close]
BLAST of Cla005049 vs. TrEMBL
Match: A0A0D2RRL4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G012900 PE=4 SV=1)

HSP 1 Score: 566.2 bits (1458), Expect = 3.1e-158
Identity = 273/366 (74.59%), Postives = 317/366 (86.61%), Query Frame = 1 

Query: 33  SYPAPNLSFTKFCLNFYSNRAPSRSFRRRASKRLKSSLKPTLDETQFQLAVSQIPPRFTS 92
           S  +P     +F   FYS +APSRS+RRR +KRLK+S KP LD+ +FQ  +SQ+PPRFT+
Sbjct: 55  SITSPTSISHQFYTYFYSTKAPSRSYRRRVNKRLKASQKPVLDQAKFQQVISQLPPRFTA 114

Query: 93  EELCNVISLQGNPLVCFELFNWASQQPRFRHDVSTYQITIKKLGEAKMYEEMDHVVNQVL 152
           +EL NVI+L+ +PLVC+ELFNWA+QQPRF+H+VSTY ITIKKLG AKMYEEMD VVNQVL
Sbjct: 115 DELYNVITLEDDPLVCWELFNWAAQQPRFKHNVSTYHITIKKLGVAKMYEEMDVVVNQVL 174

Query: 153 AVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 212
           A+ S GSE LYNTMIYFF EARKLTRA+NIFKHM+NNR  +CRPSIRTYN+LFTA LSRG
Sbjct: 175 ALRSFGSEPLYNTMIYFFAEARKLTRAVNIFKHMRNNRKFDCRPSIRTYNILFTAMLSRG 234

Query: 213 RNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMIKGYVLSLHINDALRIFHQMGVVY 272
           +++YINHMYMETIRCLFRQMV DDGIEPD+FTLN MIKGYVLSLH+NDALR+FHQMGVVY
Sbjct: 235 KDSYINHMYMETIRCLFRQMV-DDGIEPDVFTLNSMIKGYVLSLHVNDALRVFHQMGVVY 294

Query: 273 SCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGFMPSSISYNSIVNAMALNGEVEEA 332
            CLPN+FSYDYLI+GLCAQGRT+NARELC EMK  GF PS  SYNS+VNA+A+ GEVEEA
Sbjct: 295 KCLPNAFSYDYLIYGLCAQGRTNNARELCDEMKRNGFTPSGKSYNSLVNALAIAGEVEEA 354

Query: 333 VNYLWEMIDSRRSPDFITYRTVLDELCRQGRVGEATSLLRELQEKDLVDGHTYRKLLYVL 392
           V+YL EMI+ R+S D ITYRT+LDE+CR+GRV EA  LLRELQ KDLVDGHTYRKLLY +
Sbjct: 355 VHYLREMIEMRKSADLITYRTILDEICRRGRVEEAMGLLRELQSKDLVDGHTYRKLLYAM 414

Query: 393 EDDYGN 399
           ED YG+
Sbjct: 415 EDSYGD 419

[Close]
BLAST of Cla005049 vs. TrEMBL
Match: K7LTG8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 562.8 bits (1449), Expect = 3.4e-157
Identity = 278/391 (71.10%), Postives = 326/391 (83.38%), Query Frame = 1 

Query: 16  NTHHGNLSHFLPLSQIQSYPAPNLSFTKFCLNF------YSNRAPSRSFRRRASKRLKSS 75
           +TH  + +H L L   Q     N S+T+F + F      YS +APSRS++RRA KRL  S
Sbjct: 52  STHFFHHAHKLDLFLFQI----NTSYTQFPIPFAPFNSHYSTKAPSRSYQRRARKRLLKS 111

Query: 76  LKPTLDETQFQLAVSQIPPRFTSEELCNVISLQGNPLVCFELFNWASQQPRFRHDVSTYQ 135
            KPTLD+ QFQLA+SQ+PPRFT EELCNVI+ Q +PLVC ELF+WASQQPRFRHDVST+ 
Sbjct: 112 SKPTLDQAQFQLALSQLPPRFTPEELCNVIARQNDPLVCLELFHWASQQPRFRHDVSTFH 171

Query: 136 ITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN 195
           ITIKKLG AKMY+EMD +VNQ+LAVP IGSE L+N +IY+FT+ARKLTRA+N+FKHM++ 
Sbjct: 172 ITIKKLGAAKMYQEMDDIVNQLLAVPLIGSEALFNMVIYYFTQARKLTRAVNVFKHMKSR 231

Query: 196 RNLNC--RPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNC 255
           RNLNC  RPSIRTYN+LF AFL RG N+YINH+YMETIRCLFRQMV D GI+PDIF+LN 
Sbjct: 232 RNLNCFFRPSIRTYNILFAAFLGRGSNSYINHVYMETIRCLFRQMVKD-GIKPDIFSLNS 291

Query: 256 MIKGYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEK 315
           MIKGYVLSLH+NDALRIFHQMGV+Y C PN+ +YD LIHGLCAQGRT+NA+EL  EMK K
Sbjct: 292 MIKGYVLSLHVNDALRIFHQMGVIYDCPPNALTYDCLIHGLCAQGRTNNAKELYSEMKTK 351

Query: 316 GFMPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVGEA 375
           GF+PSS SYNS+VN++AL GE+EEAVNYLWEM D +RS DFITY+TVLDE+CR+G V E 
Sbjct: 352 GFVPSSKSYNSLVNSLALGGEIEEAVNYLWEMTDKQRSADFITYKTVLDEICRRGTVQEG 411

Query: 376 TSLLRELQEKDLVDGHTYRKLLYVLEDDYGN 399
           T  L+ELQEKDLVDGH YRKLLYVLEDDYGN
Sbjct: 412 TRFLQELQEKDLVDGHAYRKLLYVLEDDYGN 437

[Close]
BLAST of Cla005049 vs. TrEMBL
Match: K7LTG7_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 562.8 bits (1449), Expect = 3.4e-157
Identity = 278/391 (71.10%), Postives = 326/391 (83.38%), Query Frame = 1 

Query: 16  NTHHGNLSHFLPLSQIQSYPAPNLSFTKFCLNF------YSNRAPSRSFRRRASKRLKSS 75
           +TH  + +H L L   Q     N S+T+F + F      YS +APSRS++RRA KRL  S
Sbjct: 52  STHFFHHAHKLDLFLFQI----NTSYTQFPIPFAPFNSHYSTKAPSRSYQRRARKRLLKS 111

Query: 76  LKPTLDETQFQLAVSQIPPRFTSEELCNVISLQGNPLVCFELFNWASQQPRFRHDVSTYQ 135
            KPTLD+ QFQLA+SQ+PPRFT EELCNVI+ Q +PLVC ELF+WASQQPRFRHDVST+ 
Sbjct: 112 SKPTLDQAQFQLALSQLPPRFTPEELCNVIARQNDPLVCLELFHWASQQPRFRHDVSTFH 171

Query: 136 ITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN 195
           ITIKKLG AKMY+EMD +VNQ+LAVP IGSE L+N +IY+FT+ARKLTRA+N+FKHM++ 
Sbjct: 172 ITIKKLGAAKMYQEMDDIVNQLLAVPLIGSEALFNMVIYYFTQARKLTRAVNVFKHMKSR 231

Query: 196 RNLNC--RPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNC 255
           RNLNC  RPSIRTYN+LF AFL RG N+YINH+YMETIRCLFRQMV D GI+PDIF+LN 
Sbjct: 232 RNLNCFFRPSIRTYNILFAAFLGRGSNSYINHVYMETIRCLFRQMVKD-GIKPDIFSLNS 291

Query: 256 MIKGYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEK 315
           MIKGYVLSLH+NDALRIFHQMGV+Y C PN+ +YD LIHGLCAQGRT+NA+EL  EMK K
Sbjct: 292 MIKGYVLSLHVNDALRIFHQMGVIYDCPPNALTYDCLIHGLCAQGRTNNAKELYSEMKTK 351

Query: 316 GFMPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVGEA 375
           GF+PSS SYNS+VN++AL GE+EEAVNYLWEM D +RS DFITY+TVLDE+CR+G V E 
Sbjct: 352 GFVPSSKSYNSLVNSLALGGEIEEAVNYLWEMTDKQRSADFITYKTVLDEICRRGTVQEG 411

Query: 376 TSLLRELQEKDLVDGHTYRKLLYVLEDDYGN 399
           T  L+ELQEKDLVDGH YRKLLYVLEDDYGN
Sbjct: 412 TRFLQELQEKDLVDGHAYRKLLYVLEDDYGN 437

[Close]
BLAST of Cla005049 vs. NCBI nr
Match: gi|659072149|ref|XP_008463631.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucumis melo])

HSP 1 Score: 719.2 bits (1855), Expect = 4.1e-204
Identity = 354/391 (90.54%), Postives = 370/391 (94.63%), Query Frame = 1 

Query: 11  HSWRLN-THHGNLSHFLPLSQIQSYPAPNLSFTKFCLNFYSNRAPSRSFRRRASKRLKSS 70
           HS  LN THH NL+HFL +SQIQ+YPAPNLSFTKFCLNFYS  APSRSFRRRA+KRLK+S
Sbjct: 38  HSLSLNNTHHCNLTHFLRVSQIQTYPAPNLSFTKFCLNFYSKTAPSRSFRRRANKRLKAS 97

Query: 71  LKPTLDETQFQLAVSQIPPRFTSEELCNVISLQGNPLVCFELFNWASQQPRFRHDVSTYQ 130
           LKPTLDE QFQLAVS+IPPRFT EEL NVISLQ +PLVCFELFNWASQQPRF+HDVS+Y+
Sbjct: 98  LKPTLDEAQFQLAVSKIPPRFTPEELRNVISLQKDPLVCFELFNWASQQPRFKHDVSSYE 157

Query: 131 ITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN 190
           ITIKKLGEAKMYEEMDHVVNQ LAV SIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN
Sbjct: 158 ITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN 217

Query: 191 RNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMI 250
           RNLNCRPSIRTYNLLFTAFLSRGRN YINH+YMETIRCLFRQMVNDDGIEPDIF LNCMI
Sbjct: 218 RNLNCRPSIRTYNLLFTAFLSRGRNTYINHVYMETIRCLFRQMVNDDGIEPDIFALNCMI 277

Query: 251 KGYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGF 310
           KGYVLSLH+NDALRIFHQMGVVYSCLPNS+SYDYLIHGL AQ RTDNARELC EMKEKGF
Sbjct: 278 KGYVLSLHVNDALRIFHQMGVVYSCLPNSYSYDYLIHGLSAQARTDNARELCNEMKEKGF 337

Query: 311 MPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVGEATS 370
           +PSSISYNSIVNAMALNGEVE+AVNYLWEMID RRSPDFITY+TVLDELCR GRV EATS
Sbjct: 338 VPSSISYNSIVNAMALNGEVEDAVNYLWEMIDHRRSPDFITYKTVLDELCRLGRVVEATS 397

Query: 371 LLRELQEKDLVDGHTYRKLLYVLEDDYGNLN 401
           LLRELQEKDLVDGHTYRKLLYVLEDDYGNLN
Sbjct: 398 LLRELQEKDLVDGHTYRKLLYVLEDDYGNLN 428

[Close]
BLAST of Cla005049 vs. NCBI nr
Match: gi|449459126|ref|XP_004147297.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 715.7 bits (1846), Expect = 4.5e-203
Identity = 349/391 (89.26%), Postives = 368/391 (94.12%), Query Frame = 1 

Query: 11  HSWRLN-THHGNLSHFLPLSQIQSYPAPNLSFTKFCLNFYSNRAPSRSFRRRASKRLKSS 70
           HSW LN THH NL HFL +SQI  Y  PNLSFT F L FYS  APSRSFR+RA+KRLKSS
Sbjct: 38  HSWWLNNTHHYNLPHFLRVSQIHPYSGPNLSFTNFLLKFYSRAAPSRSFRKRANKRLKSS 97

Query: 71  LKPTLDETQFQLAVSQIPPRFTSEELCNVISLQGNPLVCFELFNWASQQPRFRHDVSTYQ 130
           LKP LDETQFQLAVS+IPPRFTSEELCNVISLQ +PLVCFELFNWASQQPRFRHD S+Y+
Sbjct: 98  LKPKLDETQFQLAVSKIPPRFTSEELCNVISLQRDPLVCFELFNWASQQPRFRHDDSSYE 157

Query: 131 ITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN 190
           ITIKKLGEAKMYEEMDHVVNQ LAV SIGSETLYNTMIYFFTEARKLTRA+NIFKHMQNN
Sbjct: 158 ITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYFFTEARKLTRAVNIFKHMQNN 217

Query: 191 RNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMI 250
           RNLNCRPSIRTYNLLFTAFLSRGRN YINHMYMETIRCLFRQMVNDDGIEPDIF+LNCMI
Sbjct: 218 RNLNCRPSIRTYNLLFTAFLSRGRNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMI 277

Query: 251 KGYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGF 310
           KGYVLSLH+NDALRIFHQMGVVYSCLPNS+S+DYLIHGLCAQ RTDNA+ELC EMKEKGF
Sbjct: 278 KGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGF 337

Query: 311 MPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVGEATS 370
           +PSSISYNSIVNA+ALNGEVE+AVNYLWEMID+RRSPDFITY+TVLDELCRQG+V EATS
Sbjct: 338 VPSSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATS 397

Query: 371 LLRELQEKDLVDGHTYRKLLYVLEDDYGNLN 401
           LLRELQEKDLVDGHTYRKLLYVLEDDYGNLN
Sbjct: 398 LLRELQEKDLVDGHTYRKLLYVLEDDYGNLN 428

[Close]
BLAST of Cla005049 vs. NCBI nr
Match: gi|645217145|ref|XP_008224504.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Prunus mume])

HSP 1 Score: 596.7 bits (1537), Expect = 3.1e-167
Identity = 299/416 (71.88%), Postives = 343/416 (82.45%), Query Frame = 1 

Query: 6   RLCIQHSWRL---------------NTHHGNLSHFLPLSQIQSYPAPNLS-------FTK 65
           RLC +HS+                 N  +  L     LSQ Q  P P ++       + +
Sbjct: 20  RLCYEHSFHQYLSNPQRMAVLSYSSNPIYSTLRPIQYLSQTQIDPVPKIASNGFLGIYER 79

Query: 66  FCL-NFYSNRAPSRSFRRRASKRLKSSLKPTLDETQFQLAVSQIPPRFTSEELCNVISLQ 125
           F L NFYS + PSRSFRRR S+R+KSS K TLDE QFQ A+SQ+ PRFT EELCNVI+ Q
Sbjct: 80  FLLYNFYSTKPPSRSFRRRESRRVKSS-KSTLDEVQFQRAISQLLPRFTPEELCNVITQQ 139

Query: 126 GNPLVCFELFNWASQQPRFRHDVSTYQITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETL 185
            +P+VC ELFNWASQQPRF+HDVSTY IT+KK+G AKMYEEMD VVNQVLA+  IGSE L
Sbjct: 140 DDPIVCLELFNWASQQPRFKHDVSTYHITVKKVGVAKMYEEMDDVVNQVLAISYIGSEAL 199

Query: 186 YNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYM 245
           YN++IYFFTEARKLTRA+NIFKHMQN+RNLNCRPSIRTYN+LFTAFLSRG N+YINHMYM
Sbjct: 200 YNSIIYFFTEARKLTRAVNIFKHMQNSRNLNCRPSIRTYNILFTAFLSRGSNSYINHMYM 259

Query: 246 ETIRCLFRQMVNDDGIEPDIFTLNCMIKGYVLSLHINDALRIFHQMGVVYSCLPNSFSYD 305
           ETIRCLFRQMV DDGIEPDI++LN MIKGYVLSLH+NDALRIFHQMGVVY+CLPNSFSYD
Sbjct: 260 ETIRCLFRQMV-DDGIEPDIYSLNSMIKGYVLSLHVNDALRIFHQMGVVYNCLPNSFSYD 319

Query: 306 YLIHGLCAQGRTDNARELCKEMKEKGFMPSSISYNSIVNAMALNGEVEEAVNYLWEMIDS 365
           YLIHGLC+QGRT+NA++LC EMK KGF+PSS SYNS+VN +ALNGEVEEAV YLWEMI+ 
Sbjct: 320 YLIHGLCSQGRTNNAKQLCNEMKSKGFIPSSKSYNSLVNGLALNGEVEEAVKYLWEMIEK 379

Query: 366 RRSPDFITYRTVLDELCRQGRVGEATSLLRELQEKDLVDGHTYRKLLYVLEDDYGN 399
           +RS +FITYRTVLDE+CRQGRVGEA  LL+E QEKDL++GHTYRKLLYVLEDDYG+
Sbjct: 380 QRSAEFITYRTVLDEICRQGRVGEAMRLLKEFQEKDLLNGHTYRKLLYVLEDDYGD 433

[Close]
BLAST of Cla005049 vs. NCBI nr
Match: gi|590585546|ref|XP_007015464.1| (Tetratricopeptide repeat-like superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 583.6 bits (1503), Expect = 2.7e-163
Identity = 286/381 (75.07%), Postives = 333/381 (87.40%), Query Frame = 1 

Query: 22  LSHFLPLSQIQSYPAPNLSFTKFCLN----FYSNRAPSRSFRRRASKRLKSSLKPTLDET 81
           L+   PLS I    +P  +   FC N    FYS RAPSRSFRRR +KRLK+S KP LD+ 
Sbjct: 54  LTQIDPLSVI----SPTANLHPFCYNSFTCFYSTRAPSRSFRRRINKRLKASSKPVLDQP 113

Query: 82  QFQLAVSQIPPRFTSEELCNVISLQGNPLVCFELFNWASQQPRFRHDVSTYQITIKKLGE 141
           +F+ AVSQ+ PRFT+EELCNVI+L+ +PLVC+ELFNWA QQPRFRHDVSTY ITIKKLG 
Sbjct: 114 KFEKAVSQLLPRFTAEELCNVITLEEDPLVCWELFNWAVQQPRFRHDVSTYHITIKKLGV 173

Query: 142 AKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPS 201
           AKMYEEMD VVNQVLA+ + GSE LYNT+IYFFTEARKLTRA+NIFKHM+NNR L+CRPS
Sbjct: 174 AKMYEEMDVVVNQVLALRTFGSEPLYNTIIYFFTEARKLTRAVNIFKHMRNNRKLDCRPS 233

Query: 202 IRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMIKGYVLSLH 261
           IRTYN+LFTA LSRGR++YINHMYMETIRCLFRQMVN DGIEPD+F+LN MIKGYVLSLH
Sbjct: 234 IRTYNILFTAMLSRGRDSYINHMYMETIRCLFRQMVN-DGIEPDVFSLNSMIKGYVLSLH 293

Query: 262 INDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGFMPSSISYN 321
           +NDALR+FHQMGVVY CLPNS+SYD+LI+GLCAQGRT+NARELC EMK+ GF+PSS SYN
Sbjct: 294 VNDALRVFHQMGVVYKCLPNSYSYDFLIYGLCAQGRTNNARELCNEMKKNGFVPSSKSYN 353

Query: 322 SIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVGEATSLLRELQEK 381
           S+VNA+AL+GEVEEA++YL EMI+ R+S DFITYRT+LDE+CR+GR  EAT LL+ELQ+K
Sbjct: 354 SLVNALALSGEVEEALHYLREMIEKRKSADFITYRTILDEICRRGRAEEATGLLKELQDK 413

Query: 382 DLVDGHTYRKLLYVLEDDYGN 399
           DLVDGHTYRKLLY +EDD+GN
Sbjct: 414 DLVDGHTYRKLLYAMEDDFGN 429

[Close]
BLAST of Cla005049 vs. NCBI nr
Match: gi|1009115705|ref|XP_015874374.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Ziziphus jujuba])

HSP 1 Score: 576.6 bits (1485), Expect = 3.3e-161
Identity = 292/402 (72.64%), Postives = 331/402 (82.34%), Query Frame = 1 

Query: 5   LRLCIQHSWRLNTHHGNLSHFLPLSQIQSYPA-PNLSFTKFCL-------NFYSNRAPSR 64
           LR  I  S   N     L     L++  +YPA P  S    C+       +FYS+R  SR
Sbjct: 35  LRRFIVFSCNFNLIGNGLRQMHNLARTGTYPASPTASHGLLCVYARFSLYSFYSSRPSSR 94

Query: 65  SFRRRASKRLKSSLKPTLDETQFQLAVSQIPPRFTSEELCNVISLQGNPLVCFELFNWAS 124
           SFRRRA KRLK++  P+LDE QFQ  VSQ+ PRFT EELCNVIS Q +P++C ELFNWA+
Sbjct: 95  SFRRRARKRLKANNVPSLDEAQFQKVVSQLLPRFTPEELCNVISQQDDPILCLELFNWAT 154

Query: 125 QQPRFRHDVSTYQITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKL 184
            QPRF+HDVSTY  TIKKLG AKMY+EMD VVNQVLAV SIGSE LYNT+IYFFTEARKL
Sbjct: 155 HQPRFKHDVSTYHTTIKKLGVAKMYQEMDDVVNQVLAVSSIGSEALYNTIIYFFTEARKL 214

Query: 185 TRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDD 244
           TRAINIFKHM+++R L+CRPSIRTYN+LF A LS G N+YINHMYMETIR LFRQMV DD
Sbjct: 215 TRAINIFKHMRSSRKLDCRPSIRTYNILFAALLSWGSNSYINHMYMETIRRLFRQMV-DD 274

Query: 245 GIEPDIFTLNCMIKGYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDN 304
           GIEPDIF+LN MIKGYVLSLH+NDALRIFHQMGVVY CLPNSFSYDYLIHGLCAQGRT+N
Sbjct: 275 GIEPDIFSLNSMIKGYVLSLHVNDALRIFHQMGVVYKCLPNSFSYDYLIHGLCAQGRTNN 334

Query: 305 ARELCKEMKEKGFMPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLD 364
           ARELC EMK KGF+PSS SYNS+VNA+AL G+VEEA+ YLWEMI+ +RS DFITYRTVLD
Sbjct: 335 ARELCNEMKNKGFVPSSKSYNSLVNALALGGDVEEAMKYLWEMIEHQRSADFITYRTVLD 394

Query: 365 ELCRQGRVGEATSLLRELQEKDLVDGHTYRKLLYVLEDDYGN 399
           E+CR+GRVG+A SLL+E QEKDLVDGHTYRKLLYVLEDD+G+
Sbjct: 395 EICRRGRVGQAMSLLKEFQEKDLVDGHTYRKLLYVLEDDFGS 435

The following BLAST results are available for this feature:
BLAST of Cla005049 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP173_ARATH2.5e-12963.69Pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Arabidop... [more]
PP254_ARATH5.4e-4731.07Pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Arabidop... [more]
PPR12_ARATH7.6e-2530.65Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... [more]
PPR28_ARATH6.5e-2430.26Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN... [more]
PP298_ARATH8.4e-2427.50Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidop... [more]
BLAST of Cla005049 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LS50_CUCSA3.2e-20389.26Uncharacterized protein OS=Cucumis sativus GN=Csa_1G086930 PE=4 SV=1[more]
A0A061GUJ4_THECC1.9e-16375.07Tetratricopeptide repeat-like superfamily protein, putative OS=Theobroma cacao G... [more]
A0A0D2RRL4_GOSRA3.1e-15874.59Uncharacterized protein OS=Gossypium raimondii GN=B456_004G012900 PE=4 SV=1[more]
K7LTG8_SOYBN3.4e-15771.10Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
K7LTG7_SOYBN3.4e-15771.10Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
BLAST of Cla005049 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659072149|ref|XP_008463631.1|4.1e-20490.54PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-... [more]
gi|449459126|ref|XP_004147297.1|4.5e-20389.26PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-... [more]
gi|645217145|ref|XP_008224504.1|3.1e-16771.88PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-... [more]
gi|590585546|ref|XP_007015464.1|2.7e-16375.07Tetratricopeptide repeat-like superfamily protein, putative [Theobroma cacao][more]
gi|1009115705|ref|XP_015874374.1|3.3e-16172.64PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla005049Cla005049.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 243..268
score: 0
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 345..373
score: 2.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 276..323
score: 7.6
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 163..208
score: 1.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 314..347
score: 4.7E-4coord: 243..277
score: 1.9E-4coord: 349..379
score: 8.6E-5coord: 162..189
score: 0.0021coord: 279..312
score: 1.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 312..346
score: 9.887coord: 197..231
score: 5.031coord: 241..271
score: 7.322coord: 159..189
score: 7.783coord: 347..381
score: 10.084coord: 277..311
score: 12.682coord: 124..154
score: 5
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 31..395
score: 1.8E
NoneNo IPR availablePANTHERPTHR24015:SF658SUBFAMILY NOT NAMEDcoord: 31..395
score: 1.8E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla005049Cla97C03G053350Watermelon (97103) v2wmwmbB124
Cla005049Csa1G086930Cucumber (Chinese Long) v2cuwmB010
Cla005049MELO3C005032Melon (DHL92) v3.5.1mewmB146
Cla005049ClCG03G002330Watermelon (Charleston Gray)wcgwmB223
Cla005049CSPI01G12820Wild cucumber (PI 183967)cpiwmB012
Cla005049Cucsa.207330Cucumber (Gy14) v1cgywmB407
Cla005049CmaCh13G001920Cucurbita maxima (Rimu)cmawmB185
Cla005049CmoCh13G001930Cucurbita moschata (Rifu)cmowmB173
Cla005049Lsi02G014380Bottle gourd (USVL1VR-Ls)lsiwmB185
Cla005049Cp4.1LG20g09070Cucurbita pepo (Zucchini)cpewmB507
Cla005049CsGy1G012900Cucumber (Gy14) v2cgybwmB012
Cla005049MELO3C005032.2Melon (DHL92) v3.6.1medwmB143
Cla005049Carg21068Silver-seed gourdcarwmB0725
Cla005049CsaV3_1G013010Cucumber (Chinese Long) v3cucwmB015
Cla005049Bhi08G000288Wax gourdwgowmB477
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla005049Cucurbita moschata (Rifu)cmowmB422
Cla005049Cucurbita moschata (Rifu)cmowmB549
Cla005049Melon (DHL92) v3.5.1mewmB095
Cla005049Watermelon (Charleston Gray)wcgwmB184
Cla005049Cucumber (Chinese Long) v2cuwmB481
Cla005049Cucurbita pepo (Zucchini)cpewmB548
Cla005049Bottle gourd (USVL1VR-Ls)lsiwmB052
Cla005049Melon (DHL92) v3.6.1medwmB092
Cla005049Silver-seed gourdcarwmB0440
Cla005049Cucumber (Chinese Long) v3cucwmB507
Cla005049Watermelon (97103) v2wmwmbB118
Cla005049Watermelon (97103) v2wmwmbB123
Cla005049Wax gourdwgowmB366
Cla005049Watermelon (97103) v1wmwmB086
Cla005049Watermelon (97103) v1wmwmB092
Cla005049Cucurbita maxima (Rimu)cmawmB429
Cla005049Cucurbita maxima (Rimu)cmawmB556